View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14353_high_54 (Length: 298)
Name: NF14353_high_54
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_high_54 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 11 - 282
Target Start/End: Complemental strand, 24185582 - 24185311
Alignment:
| Q |
11 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24185582 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
24185483 |
T |
|
| Q |
111 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24185482 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
24185383 |
T |
|
| Q |
211 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24185382 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
24185311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 282
Target Start/End: Complemental strand, 20787849 - 20787578
Alignment:
| Q |
11 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
110 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
20787849 |
catagggaaaacagattttgtgccatctaattatattttggcacggtggaggaaggatataaagcggaggtatacacttattaaatgcggttttgataat |
20787750 |
T |
|
| Q |
111 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
210 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
20787749 |
ttggctggaaaaactgaattgcaacgtgtgggtaaagcttgtgatgccttttatgagtttgcttcaacgaggataaatagtgaagatgatttagtgaaag |
20787650 |
T |
|
| Q |
211 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20787649 |
tgatgaacttgattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattgtagaagaag |
20787578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 8533233 - 8533076
Alignment:
| Q |
18 |
aaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataatttggctg |
117 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| | | ||||||||| ||||||||||| | ||||| |||||||||||||| ||||||| ||| ||| |
|
|
| T |
8533233 |
aaaacagatttagtgccatctcattatattttttctcagtggaggaaggatataaagcgacgacatacagttattaaatgtggtattgataacttgactg |
8533134 |
T |
|
| Q |
118 |
gaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttc |
175 |
Q |
| |
|
|||| ||| || || ||||||| |||||| ||||| |||||||||||| ||||||| |
|
|
| T |
8533133 |
gaaatgttgagttacagcgtgttggtaaagcatgtgatgccttttatgaagttgcttc |
8533076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 282
Target Start/End: Complemental strand, 409097 - 408826
Alignment:
| Q |
11 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
409097 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatatacttattaaatgtggttttgataat |
408998 |
T |
|
| Q |
111 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
408997 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
408898 |
T |
|
| Q |
211 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
408897 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
408826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 414845 - 415116
Alignment:
| Q |
11 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
414845 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatatacttattaaatgtggttttgataat |
414944 |
T |
|
| Q |
111 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
414945 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
415044 |
T |
|
| Q |
211 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
415045 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
415116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 282
Target Start/End: Original strand, 49961431 - 49961698
Alignment:
| Q |
15 |
gggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataatttgg |
114 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49961431 |
gggaaaacagatttcgtgtcatctaattatattttggcacggtggaggaaggatataaagtggaggtatacacttattaaatgtggttttgataatttgg |
49961530 |
T |
|
| Q |
115 |
ctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaagtgat |
214 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
49961531 |
ttggaaaaactgaattgcaacgtgcaggtaaagcttgtgatgccttttatgaatttgcttcaacgaggataaatagtgaagatgatttagtgaaagtgat |
49961630 |
T |
|
| Q |
215 |
gaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
49961631 |
gaacttaattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattgtagaagaag |
49961698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 26304748 - 26305013
Alignment:
| Q |
18 |
aaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataatttggctg |
117 |
Q |
| |
|
|||||||||| ||||||||| |||||||||| | | ||||||||| ||||||| | || ||||| ||||||||||||||||||| || ||| ||| |
|
|
| T |
26304748 |
aaaacagattaagtgccatctcattatattttttctcagtggaggaagaatataaatcaacggcatacaattattaaatgtggttttgagaacttgactg |
26304847 |
T |
|
| Q |
118 |
gaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaagtgatgaa |
217 |
Q |
| |
|
|||| ||| || |||||||||| |||||| ||||| |||||||| ||| ||||||| |||| ||||| | ||||| || ||| || ||||| |||| |
|
|
| T |
26304848 |
gaaatgttgagttacaacgtgttggtaaagcatgtgatgccttttacgaagttgcttcgacaaagataagcaccgaagaggagttattggaagtggtgaa |
26304947 |
T |
|
| Q |
218 |
ctggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaagt |
283 |
Q |
| |
|
||||| | || |||||||| |||| | ||||| |||||||||||| |||||| ||| |||| |
|
|
| T |
26304948 |
ttggatcaaggacttgaaaattaggttaacttgtaaaaaaacatctcctataattattgaaaaagt |
26305013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 24344322 - 24344593
Alignment:
| Q |
11 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24344322 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
24344421 |
T |
|
| Q |
111 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
210 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24344422 |
ttggttggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
24344521 |
T |
|
| Q |
211 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24344522 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
24344593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 24356700 - 24356971
Alignment:
| Q |
11 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
24356700 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatatacttattaaatgtggttttgataat |
24356799 |
T |
|
| Q |
111 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24356800 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
24356899 |
T |
|
| Q |
211 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24356900 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
24356971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 217
Target Start/End: Original strand, 14123379 - 14123555
Alignment:
| Q |
41 |
ttatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataatttggctggaaaaactgaattgcaacgtgtt |
140 |
Q |
| |
|
|||||||||| || |||||||||| ||||| ||| |||| | ||||||||||||||||| |||||| |||| || ||||| ||||||||||| ||| |
|
|
| T |
14123379 |
ttatattttgtcaaggtggaggaatgatattaagtggagacacacacttattaaatgtgggtttgatcatttagccggaaatgttgaattgcaactagtt |
14123478 |
T |
|
| Q |
141 |
gataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaagtgatgaa |
217 |
Q |
| |
|
| |||||| ||||| |||||||| ||| ||| ||| | ||||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
14123479 |
ggtaaagcatgtgatgccttttacgaagttgtttctatggggatacatactgaagatgatttattgaaagtgatgaa |
14123555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 40250279 - 40250370
Alignment:
| Q |
126 |
gaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaagtgatgaa |
217 |
Q |
| |
|
||||||||||||||| ||| || ||||| |||||||||||| ||||||| || | ||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
40250279 |
gaattgcaacgtgttaatatggcctgtgatgccttttatgaagttgcttctactatgataaattctgaagataatttacagaaagtgatgaa |
40250370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 40250212 - 40250277
Alignment:
| Q |
41 |
ttatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttga |
106 |
Q |
| |
|
|||||||||| ||||||||||||| || |||||||||| |||||| | |||||| ||||||||| |
|
|
| T |
40250212 |
ttatattttgccacggtggaggaagtatgtaaagcggagatatacattgattaaacatggttttga |
40250277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 282
Target Start/End: Complemental strand, 15048400 - 15048129
Alignment:
| Q |
11 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15048400 |
catagggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaggatataaagcggaggtatacacttattaaatgtggttttgataat |
15048301 |
T |
|
| Q |
111 |
ttggctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaag |
210 |
Q |
| |
|
|||||||||||||||||||||||||| || | |||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
15048300 |
ttggctggaaaaactgaattgcaacgcgtgggtaaagcttgtgatgccttttatgagtttgcttcaacgaggataaatagtgacgatgatttagtgaaag |
15048201 |
T |
|
| Q |
211 |
tgatgaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15048200 |
tgatgaaattgattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattgtagaagaag |
15048129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 282
Target Start/End: Original strand, 38177641 - 38177908
Alignment:
| Q |
15 |
gggaaaacagatttcgtgccatctaattatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataatttgg |
114 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38177641 |
gggaaaacagatttcgtgtcatctaattatattttggcacggtggaggaaggatataaaacggaggtatacacttattaaatgtggttttgataatttgg |
38177740 |
T |
|
| Q |
115 |
ctggaaaaactgaattgcaacgtgttgataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaagtgat |
214 |
Q |
| |
|
||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
38177741 |
ctggaaaaactgaattgcaacgtgtaggtaaaacttgtgatgccttttatgaatttgtttcaacgaggataaatggtgaagatgatttagtgaaagtgat |
38177840 |
T |
|
| Q |
215 |
gaactggattcaaaacatgaaaattgagttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
38177841 |
gaacttgattcaaaacatgaaaattgagttaccatgtaatgaaacatctgctagaattatagaagaag |
38177908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 143 - 282
Target Start/End: Complemental strand, 38177473 - 38177334
Alignment:
| Q |
143 |
taaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaagtgatgaactggattcaaaacatgaaaattgag |
242 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
38177473 |
taaagcttgtgatgccttttatgaatttgcttcaacgaggataaatagtgaagatgatttagtgaaagtgatgaacttgattcaaaacatgaaaattgag |
38177374 |
T |
|
| Q |
243 |
ttaccatgtaatgaaacatctcctagaattatagaagaag |
282 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
38177373 |
ttaccatataatgaaacatctcctagaattgtagaagaag |
38177334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 217
Target Start/End: Complemental strand, 20006987 - 20006811
Alignment:
| Q |
41 |
ttatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgataatttggctggaaaaactgaattgcaacgtgtt |
140 |
Q |
| |
|
|||||||||| || |||||||||| ||||| ||| |||| | ||||||||||||||||| |||||| |||| || ||||| ||||||||||| ||| |
|
|
| T |
20006987 |
ttatattttgtcaaggtggaggaatgatattaagtggagacacacacttattaaatgtgggtttgatcatttagccggaaatgttgaattgcaactagtt |
20006888 |
T |
|
| Q |
141 |
gataaagcttgtgacgccttttatgaatttgcttcaacaaggataaatagtgaagatgatttagtgaaagtgatgaa |
217 |
Q |
| |
|
| |||||| ||||| |||||||| ||| ||| ||| | ||||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
20006887 |
ggtaaagcatgtgatgccttttacgaagttgtttctatggggatacatactgaagatgatttattgaaagtgatgaa |
20006811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 35050427 - 35050493
Alignment:
| Q |
41 |
ttatattttggcacggtggaggaaagatataaagcggaggtatacacttattaaatgtggttttgat |
107 |
Q |
| |
|
|||||||||| || |||||||||| ||||| |||||||| | ||||||||||||||||| |||||| |
|
|
| T |
35050427 |
ttatattttgtcaaggtggaggaaggatattaagcggagacacacacttattaaatgtgggtttgat |
35050493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 14663265 - 14663230
Alignment:
| Q |
37 |
ctaattatattttggcacggtggaggaaagatataa |
72 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| |
|
|
| T |
14663265 |
ctaattatattttggcacggcggaggaaagatataa |
14663230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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