View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14353_low_12 (Length: 609)

Name: NF14353_low_12
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14353_low_12
NF14353_low_12
[»] chr5 (36 HSPs)
chr5 (216-597)||(28809746-28810133)
chr5 (1-102)||(2740277-2740378)
chr5 (106-199)||(28812342-28812435)
chr5 (1-107)||(18520880-18520986)
chr5 (1-102)||(35785202-35785303)
chr5 (1-100)||(35943888-35943987)
chr5 (1-111)||(33149634-33149744)
chr5 (2-107)||(13811650-13811755)
chr5 (1-107)||(36732938-36733044)
chr5 (5-102)||(14831817-14831914)
chr5 (1-102)||(40145410-40145511)
chr5 (1-100)||(28177780-28177879)
chr5 (1-102)||(42414298-42414399)
chr5 (1-100)||(6679703-6679802)
chr5 (1-100)||(26720521-26720620)
chr5 (1-100)||(26990270-26990369)
chr5 (1-100)||(15409606-15409705)
chr5 (5-100)||(31008993-31009088)
chr5 (1-102)||(36875608-36875700)
chr5 (1-100)||(2252164-2252263)
chr5 (1-100)||(3921261-3921360)
chr5 (4-100)||(38296208-38296304)
chr5 (42-100)||(10356639-10356698)
chr5 (37-102)||(33825356-33825421)
chr5 (37-111)||(16327895-16327969)
chr5 (1-111)||(39688893-39689003)
chr5 (1-102)||(6259997-6260098)
chr5 (1-114)||(9603804-9603917)
chr5 (5-102)||(20073516-20073613)
chr5 (1-57)||(31132392-31132448)
chr5 (14-102)||(41470425-41470513)
chr5 (115-201)||(11100688-11100772)
chr5 (1-105)||(21370014-21370108)
chr5 (140-195)||(813816-813871)
chr5 (37-79)||(25914930-25914971)
chr5 (1-82)||(39557513-39557594)
[»] chr4 (40 HSPs)
chr4 (1-107)||(50052424-50052530)
chr4 (1-102)||(6034047-6034148)
chr4 (1-108)||(48183045-48183152)
chr4 (1-102)||(11511458-11511559)
chr4 (1-102)||(41236350-41236451)
chr4 (1-107)||(480443-480549)
chr4 (1-107)||(29239884-29239990)
chr4 (1-102)||(54473529-54473630)
chr4 (1-107)||(42044363-42044469)
chr4 (5-102)||(50526171-50526268)
chr4 (1-100)||(40574784-40574883)
chr4 (1-102)||(3481657-3481758)
chr4 (1-114)||(23608226-23608339)
chr4 (1-102)||(29234241-29234342)
chr4 (1-100)||(31910197-31910296)
chr4 (1-107)||(24995103-24995209)
chr4 (1-108)||(29977882-29977989)
chr4 (1-100)||(53352562-53352660)
chr4 (40-100)||(55475196-55475256)
chr4 (1-110)||(29547955-29548064)
chr4 (1-61)||(41823926-41823986)
chr4 (109-211)||(2320119-2320219)
chr4 (1-100)||(19670712-19670811)
chr4 (1-85)||(17983739-17983823)
chr4 (1-109)||(48647722-48647830)
chr4 (1-100)||(47986213-47986312)
chr4 (1-100)||(50813888-50813987)
chr4 (4-97)||(28480267-28480360)
chr4 (4-97)||(28481142-28481235)
chr4 (4-97)||(28482017-28482110)
chr4 (40-100)||(8343198-8343258)
chr4 (40-100)||(55079749-55079809)
chr4 (1-100)||(32766963-32767062)
chr4 (1-108)||(47104541-47104648)
chr4 (109-179)||(31011039-31011107)
chr4 (1-73)||(56300161-56300233)
chr4 (37-100)||(18769114-18769177)
chr4 (16-78)||(33703245-33703306)
chr4 (40-85)||(18924530-18924575)
chr4 (40-100)||(44536781-44536840)
[»] chr7 (43 HSPs)
chr7 (1-102)||(3434565-3434666)
chr7 (1-114)||(7389380-7389493)
chr7 (1-104)||(3783996-3784099)
chr7 (1-107)||(19436183-19436289)
chr7 (1-102)||(19329845-19329946)
chr7 (1-107)||(8080379-8080485)
chr7 (1-102)||(36361909-36362010)
chr7 (1-102)||(38267043-38267144)
chr7 (1-107)||(38837215-38837321)
chr7 (1-107)||(40957705-40957811)
chr7 (1-102)||(4999510-4999611)
chr7 (1-102)||(35137536-35137637)
chr7 (1-102)||(36362029-36362130)
chr7 (1-105)||(3694367-3694471)
chr7 (1-100)||(35522881-35522980)
chr7 (2-100)||(21234406-21234504)
chr7 (1-102)||(32951489-32951590)
chr7 (11-100)||(46374808-46374897)
chr7 (1-100)||(8238217-8238317)
chr7 (1-100)||(40846109-40846208)
chr7 (1-100)||(18207185-18207283)
chr7 (1-100)||(32564422-32564521)
chr7 (1-100)||(38044202-38044301)
chr7 (1-100)||(39255920-39256018)
chr7 (1-100)||(22343366-22343465)
chr7 (44-107)||(35468894-35468957)
chr7 (1-100)||(36208178-36208277)
chr7 (1-100)||(41915746-41915845)
chr7 (1-100)||(46033797-46033896)
chr7 (1-107)||(10343559-10343665)
chr7 (1-100)||(31735889-31735981)
chr7 (1-107)||(11044186-11044282)
chr7 (1-100)||(41423687-41423786)
chr7 (1-64)||(16374820-16374883)
chr7 (1-100)||(26296649-26296748)
chr7 (1-100)||(2318239-2318338)
chr7 (5-100)||(7727911-7728006)
chr7 (3-71)||(27744307-27744375)
chr7 (36-107)||(45223040-45223111)
chr7 (123-161)||(12427672-12427710)
chr7 (36-102)||(32045840-32045906)
chr7 (37-79)||(42972977-42973018)
chr7 (148-201)||(33609065-33609118)
[»] chr2 (39 HSPs)
chr2 (1-106)||(28863454-28863559)
chr2 (1-102)||(17473023-17473124)
chr2 (1-102)||(40701481-40701582)
chr2 (1-108)||(9058477-9058584)
chr2 (1-108)||(10249378-10249485)
chr2 (1-107)||(33436096-33436202)
chr2 (1-102)||(5574484-5574585)
chr2 (5-102)||(4060688-4060785)
chr2 (1-102)||(7465731-7465832)
chr2 (1-102)||(13438346-13438447)
chr2 (5-102)||(32505648-32505745)
chr2 (1-105)||(19930816-19930920)
chr2 (1-100)||(40613898-40613997)
chr2 (1-107)||(20700813-20700919)
chr2 (1-111)||(28381651-28381761)
chr2 (1-107)||(30915461-30915567)
chr2 (1-102)||(27864707-27864808)
chr2 (1-100)||(42257198-42257297)
chr2 (1-100)||(38273138-38273237)
chr2 (1-107)||(38882807-38882915)
chr2 (1-100)||(2533129-2533227)
chr2 (1-100)||(17820000-17820099)
chr2 (37-102)||(33436214-33436279)
chr2 (1-100)||(26891500-26891599)
chr2 (1-99)||(3439985-3440083)
chr2 (1-100)||(36168841-36168940)
chr2 (1-100)||(45097731-45097830)
chr2 (1-102)||(41575140-41575242)
chr2 (1-85)||(2997483-2997567)
chr2 (36-111)||(17823778-17823853)
chr2 (1-100)||(38732359-38732458)
chr2 (1-100)||(43490126-43490225)
chr2 (5-62)||(3737986-3738043)
chr2 (148-201)||(38842998-38843051)
chr2 (1-85)||(13365373-13365457)
chr2 (40-100)||(15428775-15428835)
chr2 (1-55)||(3154193-3154247)
chr2 (346-391)||(16136855-16136900)
chr2 (1-100)||(44151928-44152031)
[»] chr8 (33 HSPs)
chr8 (1-108)||(14547919-14548026)
chr8 (1-102)||(5957833-5957934)
chr8 (5-102)||(37038482-37038579)
chr8 (1-111)||(34012292-34012402)
chr8 (1-102)||(504117-504218)
chr8 (1-102)||(12831050-12831151)
chr8 (1-102)||(15197336-15197437)
chr8 (1-102)||(1179936-1180037)
chr8 (1-102)||(23122593-23122694)
chr8 (1-100)||(10621083-10621182)
chr8 (1-102)||(40423939-40424040)
chr8 (1-100)||(15048178-15048276)
chr8 (1-100)||(43414577-43414676)
chr8 (1-100)||(10284627-10284726)
chr8 (1-102)||(44507083-44507184)
chr8 (1-85)||(8841428-8841512)
chr8 (1-108)||(4854859-4854966)
chr8 (1-102)||(9122198-9122289)
chr8 (1-100)||(16383382-16383481)
chr8 (37-102)||(20074966-20075031)
chr8 (1-114)||(24307789-24307902)
chr8 (1-100)||(30479470-30479569)
chr8 (1-100)||(34307221-34307320)
chr8 (1-107)||(42221513-42221619)
chr8 (1-100)||(16056397-16056496)
chr8 (1-100)||(17443830-17443929)
chr8 (1-114)||(15258925-15259038)
chr8 (1-100)||(32032730-32032828)
chr8 (42-100)||(24307634-24307692)
chr8 (115-178)||(13970102-13970163)
chr8 (26-100)||(14055613-14055687)
chr8 (1-63)||(38229470-38229532)
chr8 (50-100)||(25838202-25838252)
[»] chr3 (45 HSPs)
chr3 (1-108)||(54868891-54868998)
chr3 (1-107)||(49607412-49607518)
chr3 (1-102)||(53982014-53982115)
chr3 (1-102)||(33644203-33644304)
chr3 (1-100)||(52629305-52629404)
chr3 (1-102)||(8076396-8076497)
chr3 (1-102)||(17470408-17470509)
chr3 (2-107)||(27714888-27714993)
chr3 (1-102)||(31456692-31456793)
chr3 (1-101)||(48587087-48587187)
chr3 (1-100)||(26141528-26141627)
chr3 (1-109)||(11095351-11095457)
chr3 (1-109)||(33118847-33118955)
chr3 (1-107)||(36707424-36707526)
chr3 (1-100)||(41189760-41189859)
chr3 (1-111)||(24699950-24700060)
chr3 (1-102)||(14623835-14623936)
chr3 (1-102)||(35536629-35536730)
chr3 (1-100)||(11347918-11348017)
chr3 (1-100)||(20764911-20765010)
chr3 (1-100)||(26754700-26754799)
chr3 (1-100)||(51419356-51419455)
chr3 (1-102)||(13898051-13898152)
chr3 (1-100)||(47531870-47531969)
chr3 (1-101)||(30801729-30801829)
chr3 (3-102)||(9563002-9563101)
chr3 (37-102)||(8956765-8956830)
chr3 (1-108)||(35965778-35965877)
chr3 (1-105)||(25407143-25407248)
chr3 (1-102)||(41080712-41080811)
chr3 (115-178)||(37489887-37489948)
chr3 (1-100)||(11907376-11907475)
chr3 (1-83)||(36331325-36331407)
chr3 (2-98)||(35093592-35093688)
chr3 (40-100)||(45058588-45058647)
chr3 (1-100)||(1758452-1758553)
chr3 (36-102)||(21746212-21746280)
chr3 (141-201)||(20450617-20450677)
chr3 (1-100)||(48375702-48375801)
chr3 (112-201)||(42217788-42217875)
chr3 (121-178)||(44947157-44947212)
chr3 (43-100)||(36331416-36331473)
chr3 (1-114)||(42823102-42823215)
chr3 (40-100)||(25395368-25395428)
chr3 (35-79)||(52629951-52629994)
[»] chr1 (34 HSPs)
chr1 (1-102)||(27564731-27564832)
chr1 (1-102)||(44548372-44548473)
chr1 (5-102)||(51898683-51898780)
chr1 (5-107)||(2581913-2582015)
chr1 (1-102)||(9474872-9474973)
chr1 (1-102)||(47452316-47452417)
chr1 (1-102)||(48716278-48716379)
chr1 (1-107)||(8346384-8346490)
chr1 (1-102)||(3000322-3000423)
chr1 (1-100)||(32813252-32813351)
chr1 (1-107)||(38595152-38595258)
chr1 (1-107)||(38632317-38632423)
chr1 (1-102)||(37649201-37649302)
chr1 (1-102)||(50630461-50630562)
chr1 (1-108)||(26274429-26274536)
chr1 (1-102)||(43135-43236)
chr1 (1-102)||(41758808-41758909)
chr1 (1-100)||(49811523-49811622)
chr1 (1-111)||(45044556-45044666)
chr1 (1-98)||(26440741-26440838)
chr1 (1-100)||(44453984-44454083)
chr1 (5-102)||(11152378-11152474)
chr1 (1-100)||(5958996-5959095)
chr1 (1-100)||(37926434-37926533)
chr1 (1-100)||(50590996-50591095)
chr1 (1-75)||(13414791-13414865)
chr1 (1-100)||(41608489-41608588)
chr1 (37-107)||(23597123-23597193)
chr1 (5-102)||(3302533-3302630)
chr1 (5-62)||(48489343-48489400)
chr1 (5-100)||(6260875-6260970)
chr1 (1-100)||(47748448-47748546)
chr1 (318-396)||(14127049-14127127)
chr1 (109-153)||(31259543-31259587)
[»] chr6 (22 HSPs)
chr6 (1-103)||(22880654-22880756)
chr6 (1-111)||(32869672-32869782)
chr6 (1-102)||(17598557-17598658)
chr6 (1-102)||(29857830-29857931)
chr6 (1-102)||(11427619-11427722)
chr6 (1-112)||(6209461-6209572)
chr6 (1-100)||(31976253-31976352)
chr6 (1-107)||(23128123-23128229)
chr6 (1-102)||(31109396-31109497)
chr6 (1-108)||(28536484-28536589)
chr6 (1-107)||(15832575-15832681)
chr6 (1-100)||(31110757-31110854)
chr6 (1-98)||(946383-946480)
chr6 (1-100)||(15508020-15508119)
chr6 (1-100)||(15990038-15990137)
chr6 (1-100)||(30341356-30341455)
chr6 (1-107)||(12732480-12732586)
chr6 (1-102)||(31953026-31953127)
chr6 (1-100)||(4231553-4231652)
chr6 (1-100)||(9379708-9379807)
chr6 (40-102)||(22422053-22422115)
chr6 (109-201)||(20584427-20584517)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-102)||(4032-4133)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-102)||(925-1026)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-102)||(925-1026)
[»] scaffold0007 (1 HSPs)
scaffold0007 (494-599)||(249571-249676)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-100)||(10105-10204)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-100)||(8859-8958)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-85)||(152518-152602)
[»] scaffold0347 (1 HSPs)
scaffold0347 (109-178)||(11843-11910)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-62)||(17097-17158)


Alignment Details
Target: chr5 (Bit Score: 319; Significance: 1e-180; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 216 - 597
Target Start/End: Complemental strand, 28810133 - 28809746
Alignment:
Q  216 taaattggaattcaagaaatcaaatctcaaatcccagctaccaaatattattactactaaaacagatttaagatccacgttggggaagcaggcggtgtgg 315  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28810133 taaattgaaattcaagaaatcaaatctcaaatcccagctaccaaatattattactactaaaacagatttaagatccacgttggggaagcaggcggtgtgg 28810034  T
Q  316 aaa-tactcacgcaaactgaatctttaatcgctaggttattcaaagctagata----ctttcccactagtgattactttgcagcagatttggcaaagtat 410  Q
    ||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    |||||||||||| ||||||||||||||||||||||| ||||||    
T  28810033 aaaatactcacgcaacctgaatctttaatcgctagattattcaaagctagatatatactttcccactagcgattactttgcagcagatttggcgaagtat 28809934  T
Q  411 gtggagtgttaaatcacacaccattccccaacctactcctatgaccc-tattatggccaatctcgaagtagctgattttttactgccgcataccaagcag 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  28809933 gtggagtgttaaatcacacaccattccccaacctactcctatgacccctattatggccaatctcaaagtagctgattttttacagcctcataccaagcag 28809834  T
Q  510 tggcattatgaaaatattggcattctgtttggcagcatgtcagctcatcaaatatgccgaactcccctacttcacttggttcaaactg 597  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28809833 tggcattatgaaaatactggcattctgtttggcagcatgtcagctcatcaaatatgccgaactcccctacttcacttggttcaaactg 28809746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2740378 - 2740277
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2740378 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 2740279  T
Q  101 ta 102  Q
    ||    
T  2740278 ta 2740277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 28812435 - 28812342
Alignment:
Q  106 ttaaaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataatt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28812435 ttaaaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataatt 28812342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18520880 - 18520986
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18520880 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T
Q  101 tattctt 107  Q
    |||||||    
T  18520980 tattctt 18520986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35785303 - 35785202
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  35785303 aaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 35785204  T
Q  101 ta 102  Q
    ||    
T  35785203 ta 35785202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35943888 - 35943987
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  35943888 aaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcat 35943987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33149634 - 33149744
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  33149634 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 33149733  T
Q  101 tattcttaaaa 111  Q
    || || |||||    
T  33149734 tactcataaaa 33149744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 13811755 - 13811650
Alignment:
Q  2 aagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatt 101  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcttt 13811656  T
Q  102 attctt 107  Q
    | ||||    
T  13811655 actctt 13811650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36732938 - 36733044
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  36732938 aaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcat 36733037  T
Q  101 tattctt 107  Q
    || ||||    
T  36733038 tactctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 14831914 - 14831817
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  14831914 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatta 14831817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40145511 - 40145410
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||    
T  40145511 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcat 40145412  T
Q  101 ta 102  Q
    ||    
T  40145411 ta 40145410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28177879 - 28177780
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||| |||| || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28177879 aaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 28177780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42414298 - 42414399
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||    
T  42414298 aaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcat 42414397  T
Q  101 ta 102  Q
    ||    
T  42414398 ta 42414399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6679802 - 6679703
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||| ||||||||| |||| || || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  6679802 aaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcat 6679703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26720620 - 26720521
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||||||||||| ||  | ||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  26720620 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26720521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26990369 - 26990270
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||||||||||| ||  | ||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  26990369 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26990270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15409606 - 15409705
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||| |||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||    
T  15409606 aaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcat 15409705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 31009088 - 31008993
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||   ||||||| ||||||||||||| ||||||||||    
T  31009088 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcat 31008993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36875608 - 36875700
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| ||||         ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  36875608 aaagagaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2252164 - 2252263
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  2252164 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 2252263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3921261 - 3921360
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  3921261 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 3921360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 38296304 - 38296208
Alignment:
Q  4 gagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||  ||||||||||| ||||||||| ||||||||||||||| | ||  ||||||||| ||||||||   |||||||||||||    
T  38296304 gagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcat 38296208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  42 tcagatttttgtgtgggtgtcaaatgg-tgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 33825356 - 33825421
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||||| ||||||||| |||||||    
T  33825356 acgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcatta 33825421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 16327969 - 16327895
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 111  Q
    ||||||||||||||| ||||||||||||  | ||||||||||||||||||| | ||| |||||||| | ||||||    
T  16327969 acgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattacttttaaaa 16327895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 39688893 - 39689003
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| ||| |||||| | ||  | || || | |||||||||||||||||||||||  | ||||||||||| ||||| ||| ||||||||||    
T  39688893 aaagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcat 39688992  T
Q  101 tattcttaaaa 111  Q
     | ||||||||    
T  39688993 aactcttaaaa 39689003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6259997 - 6260098
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| || | | |||| || || | |||| ||||||||| |||||||| ||| ||||||||| |||||| || ||| ||||||||||    
T  6259997 aaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcat 6260096  T
Q  101 ta 102  Q
    ||    
T  6260097 ta 6260098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9603917 - 9603804
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||  ||| ||||  | || | ||||||||||||||||| ||||| ||   |||||||  ||||||||||||| ||||||||||    
T  9603917 aaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcat 9603818  T
Q  101 tattcttaaaataa 114  Q
    || |||||| ||||    
T  9603817 tactcttaatataa 9603804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 20073516 - 20073613
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    ||||||||||||||||| || |||||||    |||||  |||||||| |||| |||||||| ||||||||| || |||| ||||||||| ||||||||    
T  20073516 agaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcatta 20073613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31132448 - 31132392
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgg 57  Q
    ||||| ||||| |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  31132448 aaagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 41470425 - 41470513
Alignment:
Q  14 gcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    ||||||||||| ||||||| |||||||||||||||||| | ||  | | ||| | ||||||||||||||| | ||||||||||| ||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattatta 41470513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 11100772 - 11100688
Alignment:
Q  115 cgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 201  Q
    |||||||||||||| |||||||||  ||||||||||| || |||| ||| ||||||| ||||||  || |||||| |||||||||||    
T  11100772 cgtttgagcttatagcttatcatt--ttttcttccatctttacccttattattttaactaaaacccatatttaccctttataattta 11100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21370108 - 21370014
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||| ||||||||| ||||||| || || ||||||||||||| |||          |||||||| |||||||||||||||||||||||||    
T  21370108 aaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtg----------ggtgtattaccacctaaggatgtctatgtatcat 21370019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 813816 - 813871
Alignment:
Q  140 tttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttat 195  Q
    ||||||||||| ||| |||| |||||| |||||||||| ||||||||||| |||||    
T  813816 tttttcttccaattttacccttatcatattaattaaaatttatgtttaccctttat 813871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 25914971 - 25914930
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccac 79  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  25914971 acgtgtcagaattttgtgtgggtgt-aaatggtgtattgccac 25914930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39557513 - 39557594
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta 82  Q
    |||||||||||||| ||||  ||| |||| || |  ||||||||||||||||||||| ||| ||  |||||||| |||||||    
T  39557513 aaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 9e-44; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 50052424 - 50052530
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50052424 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 50052523  T
Q  101 tattctt 107  Q
    || ||||    
T  50052524 tactctt 50052530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6034148 - 6034047
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  6034148 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 6034049  T
Q  101 ta 102  Q
    ||    
T  6034048 ta 6034047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 48183045 - 48183152
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  48183045 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcat 48183144  T
Q  101 tattctta 108  Q
    || |||||    
T  48183145 tactctta 48183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11511458 - 11511559
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11511458 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 11511557  T
Q  101 ta 102  Q
    ||    
T  11511558 ta 11511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41236451 - 41236350
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  41236451 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 41236352  T
Q  101 ta 102  Q
    ||    
T  41236351 ta 41236350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 480443 - 480549
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  480443 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 480542  T
Q  101 tattctt 107  Q
    || ||||    
T  480543 tactctt 480549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29239990 - 29239884
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  29239990 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcat 29239891  T
Q  101 tattctt 107  Q
    || ||||    
T  29239890 tactctt 29239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 54473529 - 54473630
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  54473529 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcat 54473628  T
Q  101 ta 102  Q
    ||    
T  54473629 ta 54473630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42044363 - 42044469
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  || | ||||||||||||||||| ||||||||||||||    
T  42044363 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcat 42044462  T
Q  101 tattctt 107  Q
    || ||||    
T  42044463 tactctt 42044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 50526171 - 50526268
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||| |||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  50526171 agaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatta 50526268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 40574883 - 40574784
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| ||||||||| ||| |  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  40574883 aaagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 40574784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3481758 - 3481657
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||    
T  3481758 aaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcat 3481659  T
Q  101 ta 102  Q
    ||    
T  3481658 ta 3481657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23608339 - 23608226
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||  | ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||| ||||||    
T  23608339 aaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcat 23608240  T
Q  101 tattcttaaaataa 114  Q
    || |||||| ||||    
T  23608239 tactcttaatataa 23608226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29234241 - 29234342
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||| ||||| |||||||||||| |||||| ||||||||||||||    
T  29234241 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcat 29234340  T
Q  101 ta 102  Q
    ||    
T  29234341 ta 29234342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31910296 - 31910197
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| |||| ||  ||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  31910296 aaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcat 31910197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24995103 - 24995209
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||| |||||||||||| |||||| |||| || ||||||    
T  24995103 aaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcat 24995202  T
Q  101 tattctt 107  Q
    || ||||    
T  24995203 tactctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29977989 - 29977882
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| ||||  | |||||||||||||||||||||||||||| ||  |||||||||||||||| || | | ||||||||||    
T  29977989 aaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcat 29977890  T
Q  101 tattctta 108  Q
    || |||||    
T  29977889 tactctta 29977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 53352562 - 53352660
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||   ||||||| ||||||||| ||||||||||||||    
T  53352562 aaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 55475256 - 55475196
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcat 55475196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29547955 - 29548064
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| ||||||| ||| |||||||||||  |  | || |||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||    
T  29547955 aaagaaaaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 29548054  T
Q  101 tattcttaaa 110  Q
     | |||||||    
T  29548055 aactcttaaa 29548064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41823986 - 41823926
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgt 61  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  41823986 aaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 2320119 - 2320219
Alignment:
Q  109 aaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataatttaaaacaaa 208  Q
    ||||| ||||||| |||||||||||||| |  |||||||| ||||| | || |||||||||||| |||||| ||||||||  ||||||||||||||||||    
T  2320119 aaatagcgtttgaccttataacttatcact--ttttcttcaatttttatccttatcattttaatcaaaactcatgtttactctttataatttaaaacaaa 2320216  T
Q  209 aag 211  Q
    |||    
T  2320217 aag 2320219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19670712 - 19670811
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || ||||||||||||||||| |||||||  ||||||||||||||||||| ||| ||||||||||    
T  19670712 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 19670811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 17983739 - 17983823
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 85  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  |||||||||||||||||||    
T  17983739 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 48647722 - 48647830
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||||||||||||  ||||||| || |||||| |||||||| ||||||||| ||  |||||||||  |||||||||||| ||||| ||||    
T  48647722 aaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcat 48647821  T
Q  101 tattcttaa 109  Q
     | ||||||    
T  48647822 aactcttaa 48647830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 47986312 - 47986213
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||| ||||||  | ||||||||||||||||| ||| ||||||||||    
T  47986312 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcat 47986213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 50813888 - 50813987
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| | ||  | || || |||||||||||||||||||||||||  |||||||| |||||||||  ||| ||||||||||    
T  50813888 aaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcat 50813987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 28480267 - 28480360
Alignment:
Q  4 gagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtat 97  Q
    ||||||||||| ||||| ||| ||||| | ||||| ||||||||||||||||| |||| ||   |||||||| ||||||||| |||||||||||    
T  28480267 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 28481142 - 28481235
Alignment:
Q  4 gagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtat 97  Q
    ||||||||||| ||||| ||| ||||| | ||||| ||||||||||||||||| |||| ||   |||||||| ||||||||| |||||||||||    
T  28481142 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 28482017 - 28482110
Alignment:
Q  4 gagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtat 97  Q
    ||||||||||| ||||| ||| ||||| | ||||| ||||||||||||||||| |||| ||   |||||||| ||||||||| |||||||||||    
T  28482017 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 8343198 - 8343258
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||| ||| ||||||||| | ||||||||||||||||||||| ||||||||||    
T  8343198 tgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcat 8343258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 55079749 - 55079809
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcat 55079809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32767062 - 32766963
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| ||||||| || ||||  |  | || |||||||||||||| ||||||||||  ||||||||||||||||||  ||| ||||||||||    
T  32767062 aaagagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcat 32766963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 47104648 - 47104541
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||| ||| || |   ||| |||||||| |||||||||||||||||| |  |||||||| || ||||| |||||||| ||||||    
T  47104648 aaagagaaagtgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcat 47104549  T
Q  101 tattctta 108  Q
    || |||||    
T  47104548 tactctta 47104541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 31011039 - 31011107
Alignment:
Q  109 aaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaact 179  Q
    ||||| ||||| |||||||||||| |||||  ||||||||||| || |||| |||||||||||||||||||    
T  31011039 aaatatcgtttaagcttataacttctcatt--ttttcttccatatttacccttatcattttaattaaaact 31011107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 56300161 - 56300233
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtat 73  Q
    |||||||||||||| |||||| |||| ||  | || || |||||||||||||||||| ||||||||| |||||    
T  56300161 aaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaatgatgtat 56300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 18769177 - 18769114
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||||||| | | ||||||| |  || ||||||||| ||||||||||    
T  18769177 acgtgtcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcat 18769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 33703245 - 33703306
Alignment:
Q  16 ttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgcca 78  Q
    |||||||||||||| ||  | |||||||||| |||||||||||||| ||| ||||||||||||    
T  33703245 ttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 33703306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 18924530 - 18924575
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 85  Q
    |||||||||||||||||| | ||||  |||||||||||||||||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagg 18924575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 44536781 - 44536840
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||| |||| || |||||||||||||||||   ||| ||||||||||    
T  44536781 tgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcat 44536840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3434666 - 3434565
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3434666 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 3434567  T
Q  101 ta 102  Q
    ||    
T  3434566 ta 3434565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7389493 - 7389380
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  7389493 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 7389394  T
Q  101 tattcttaaaataa 114  Q
    || |||||||||||    
T  7389393 tactcttaaaataa 7389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3784099 - 3783996
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  3784099 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 3784000  T
Q  101 tatt 104  Q
    ||||    
T  3783999 tatt 3783996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19436183 - 19436289
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  19436183 aaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcat 19436282  T
Q  101 tattctt 107  Q
    || ||||    
T  19436283 tactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19329946 - 19329845
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19329946 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcat 19329847  T
Q  101 ta 102  Q
    ||    
T  19329846 ta 19329845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8080379 - 8080485
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  8080379 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 8080478  T
Q  101 tattctt 107  Q
    || ||||    
T  8080479 tactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36361909 - 36362010
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  36361909 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcat 36362008  T
Q  101 ta 102  Q
    ||    
T  36362009 ta 36362010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38267144 - 38267043
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||    
T  38267144 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcat 38267045  T
Q  101 ta 102  Q
    ||    
T  38267044 ta 38267043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38837321 - 38837215
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||  || ||||||||||||||||||| ||||||||||||||    
T  38837321 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcat 38837222  T
Q  101 tattctt 107  Q
    || ||||    
T  38837221 tactctt 38837215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40957811 - 40957705
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||||  ||||||||||||||    
T  40957811 aaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcat 40957712  T
Q  101 tattctt 107  Q
    || ||||    
T  40957711 tactctt 40957705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4999510 - 4999611
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  4999510 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 4999609  T
Q  101 ta 102  Q
    ||    
T  4999610 ta 4999611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35137637 - 35137536
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  35137637 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcat 35137538  T
Q  101 ta 102  Q
    ||    
T  35137537 ta 35137536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36362130 - 36362029
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||    
T  36362130 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcat 36362031  T
Q  101 ta 102  Q
    ||    
T  36362030 ta 36362029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3694471 - 3694367
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||| ||| ||||||    
T  3694471 aaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcat 3694372  T
Q  101 tattc 105  Q
    |||||    
T  3694371 tattc 3694367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35522980 - 35522881
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||  |  | ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  35522980 aaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 21234504 - 21234406
Alignment:
Q  2 aagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||| |||||||||||||| | || ||  |||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcat 21234406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32951489 - 32951590
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| ||| | ||||||| || |||||  ||||||||||||||    
T  32951489 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcat 32951588  T
Q  101 ta 102  Q
    ||    
T  32951589 ta 32951590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 46374808 - 46374897
Alignment:
Q  11 tgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| |||| ||  | ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcat 46374897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8238317 - 8238217
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta-aggatgtctatgtatca 99  Q
    ||||||||||||| |||||||||| ||||  | ||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||    
T  8238317 aaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatca 8238218  T
Q  100 t 100  Q
    |    
T  8238217 t 8238217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40846109 - 40846208
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||  ||||||||| ||||  ||||||| ||| |||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||    
T  40846109 aaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcat 40846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18207283 - 18207185
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| | |||||  | |||||| |||||||||| ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  18207283 aaagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcat 18207185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32564422 - 32564521
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||  ||||||||| ||||  || | || |||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  32564422 aaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcat 32564521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 38044301 - 38044202
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  |||| |||||||||||||||||| ||||||  ||||||||||||||||||| ||| ||||||||||    
T  38044301 aaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcat 38044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39255920 - 39256018
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||| ||  |||||||  | ||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||    
T  39255920 aaagagaaagtgttcttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcat 39256018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22343465 - 22343366
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |    || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  22343465 aaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 22343366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 35468894 - 35468957
Alignment:
Q  44 agatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 107  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactctt 35468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36208277 - 36208178
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| ||||||||||| || ||||||| || || |||||| ||||||||||||||||||    |||||| |||||||||| ||||||||||||||    
T  36208277 aaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcat 36208178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41915845 - 41915746
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||    
T  41915845 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 41915746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 46033797 - 46033896
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| | |||||||||||  | || || || ||||||||||||||| ||||||||| ||| |||||||||||||||||| || ||||||||||||    
T  46033797 aaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcat 46033896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10343559 - 10343665
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||| | ||| |  |||||| ||  | ||||||||||||||||||||||||||   ||||||| |||||||||| ||||||||||||||    
T  10343559 aaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcat 10343658  T
Q  101 tattctt 107  Q
    || ||||    
T  10343659 tactctt 10343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31735981 - 31735889
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||||||||||| ||  | ||||||       |||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  31735981 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgt-------ttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcat 31735889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11044282 - 11044186
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||          |||||||||| | ||||||||||||||||| ||||||||||||||    
T  11044282 aaagagaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcat 11044193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41423786 - 41423687
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| | ||||||| ||||||| |||| || || ||||||||||||||||  |||||||  |||||||| ||| |||| ||||||||||||||||    
T  41423786 aaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcat 41423687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16374820 - 16374883
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaa 64  Q
    |||||||| ||||||||||| | ||||||||| || ||||||||||||||||||||| ||||||    
T  16374820 aaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaa 16374883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26296748 - 26296649
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| || ||||||||||| ||||  |  | |||| |||||||||| ||||| ||| ||| ||| ||||| ||||||||||||||||||||||||    
T  26296748 aaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcat 26296649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2318239 - 2318338
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||| ||||| ||  || ||||||| || ||  ||||||||||||||||||||||||  ||||| |||||||||| || |||  |||||||||    
T  2318239 aaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 7728006 - 7727911
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||||||||| ||||  | || || |||||||||||| ||||  ||||||  |||||||| |||||||||| ||| ||||||||||    
T  7728006 agaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcat 7727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 27744307 - 27744375
Alignment:
Q  3 agagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgt 71  Q
    ||||||| ||||||| || |||||||||||  | || |||||||||||||||||||| ||||| |||||    
T  27744307 agagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 45223111 - 45223040
Alignment:
Q  36 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 107  Q
    |||||||||||||||||||| | |||  ||   ||||||||||||||||||||| ||| |||||||| ||||    
T  45223111 tacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactctt 45223040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 12427672 - 12427710
Alignment:
Q  123 cttataacttatcattatttttcttccattttaacccat 161  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  12427672 cttataacttatcattctttttcttccatttttacccat 12427710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 32045906 - 32045840
Alignment:
Q  36 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||||||||||| |||||||||| | |  | |||||||||||||| || | ||||||||||||    
T  32045906 tacgtgtcagatttttatgtgggtgtccagtaatatattgccacctaagaatatatatgtatcatta 32045840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 42972977 - 42973018
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccac 79  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  42972977 acgtgtcagaattttgtgtgggtgt-aaatggtgtattgccac 42973018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 33609118 - 33609065
Alignment:
Q  148 ccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 201  Q
    ||||||| |||| ||| ||||||||||||||  ||||||||| |||||||||||    
T  33609118 ccatttttacccttattattttaattaaaacccatgtttaccctttataattta 33609065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 3e-43; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28863559 - 28863454
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  28863559 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T
Q  101 tattct 106  Q
    ||||||    
T  28863459 tattct 28863454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17473124 - 17473023
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  17473124 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 17473025  T
Q  101 ta 102  Q
    ||    
T  17473024 ta 17473023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40701582 - 40701481
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  40701582 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 40701483  T
Q  101 ta 102  Q
    ||    
T  40701482 ta 40701481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9058584 - 9058477
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  9058584 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 9058485  T
Q  101 tattctta 108  Q
    || |||||    
T  9058484 tactctta 9058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10249378 - 10249485
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  10249378 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcat 10249477  T
Q  101 tattctta 108  Q
    || |||||    
T  10249478 tactctta 10249485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33436096 - 33436202
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33436096 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 33436195  T
Q  101 tattctt 107  Q
    || ||||    
T  33436196 tactctt 33436202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5574484 - 5574585
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  5574484 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 5574583  T
Q  101 ta 102  Q
    ||    
T  5574584 ta 5574585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 4060785 - 4060688
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||    
T  4060785 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatta 4060688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7465731 - 7465832
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  7465731 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 7465830  T
Q  101 ta 102  Q
    ||    
T  7465831 ta 7465832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13438447 - 13438346
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||    
T  13438447 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcat 13438348  T
Q  101 ta 102  Q
    ||    
T  13438347 ta 13438346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 32505648 - 32505745
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatta 32505745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19930816 - 19930920
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  19930816 aaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T
Q  101 tattc 105  Q
    |||||    
T  19930916 tattc 19930920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40613898 - 40613997
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| |||| ||  | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40613898 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 40613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20700919 - 20700813
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||    
T  20700919 aaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcat 20700820  T
Q  101 tattctt 107  Q
    || ||||    
T  20700819 tactctt 20700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28381651 - 28381761
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||  |||| || ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||    
T  28381651 aaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcat 28381750  T
Q  101 tattcttaaaa 111  Q
    || || |||||    
T  28381751 tactcataaaa 28381761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30915567 - 30915461
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  30915567 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcat 30915468  T
Q  101 tattctt 107  Q
    || ||||    
T  30915467 tactctt 30915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27864808 - 27864707
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||||||||||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 27864709  T
Q  101 ta 102  Q
    ||    
T  27864708 ta 27864707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 42257297 - 42257198
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| |||| ||  | ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  42257297 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcat 42257198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 38273138 - 38273237
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||| ||||||| |||| ||  ||||||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||||||    
T  38273138 aaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcat 38273237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38882807 - 38882915
Alignment:
Q  1 aaagagaaagtgtgcttgtgcggga---tccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtat 97  Q
    |||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||    
T  38882807 aaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtat 38882905  T
Q  98 cattattctt 107  Q
    ||||| ||||    
T  38882906 cattactctt 38882915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2533227 - 2533129
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| |||||||||||||||||| || | ||  ||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||    
T  2533227 aaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcat 2533129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 17820000 - 17820099
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||| ||||| ||| |||||||||| || |||||||||||||||||||||||||  ||||||||||||||||  | ||||||||||||||    
T  17820000 aaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcat 17820099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 33436279 - 33436214
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcatta 33436214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 26891500 - 26891599
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| ||||||||| || | ||||||| || || ||||||||||||||||||||||| |  ||||||||||||||||||| || |||||||||||    
T  26891500 aaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcat 26891599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3440083 - 3439985
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatca 99  Q
    ||||||||| |||||||||||||| |||||||||  || ||| ||||||||||||||||||| |   |||||||||||||||||| |||||| ||||||    
T  3440083 aaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36168940 - 36168841
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||| |||||||||||| |||| ||  | |||||||| ||||||||||||| || ||| | ||||||| || |||||||||||||||||||||    
T  36168940 aaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcat 36168841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 45097731 - 45097830
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||| ||||||||||  | ||||||||||||||||||||| ||||||||||    
T  45097731 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 45097830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41575242 - 41575140
Alignment:
Q  1 aaagagaaagtgtgcttgtgc-gggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatca 99  Q
    ||||||||||||||||||||  ||| ||||| | || || ||||| |||||||||||  ||||||| |||||||| ||| ||||||||||||||||||||    
T  41575242 aaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatca 41575143  T
Q  100 tta 102  Q
    |||    
T  41575142 tta 41575140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2997483 - 2997567
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 85  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  |||||||||||||||||||    
T  2997483 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 17823853 - 17823778
Alignment:
Q  36 tacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattcttaaaa 111  Q
    ||||||||||||||||||||||||||  |    ||||||||||||||||||||| |||||||||||| ||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactcttaaaa 17823778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 38732458 - 38732359
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  | || || |||||||||||||||||||||||||  | ||||||| ||| ||||| ||| ||||||||||    
T  38732458 aaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcat 38732359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43490225 - 43490126
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| ||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  ||||||||| ||||||||| ||| ||||||||||    
T  43490225 aaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcat 43490126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 3738043 - 3737986
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtc 62  Q
    ||||| |||||||||||||| ||||| | || || |||||||||||||||||||||||    
T  3738043 agaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 38842998 - 38843051
Alignment:
Q  148 ccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 201  Q
    ||||||| |||||||| ||||||||||||| | ||||||||| |||||||||||    
T  38842998 ccatttttacccatattattttaattaaaattcatgtttaccctttataattta 38843051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13365457 - 13365373
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 85  Q
    ||||||||||||| |||||||||| ||||  |    || |||||||||||||||||||||||||  ||| |||||||| ||||||    
T  13365457 aaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 15428775 - 15428835
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| |||| ||  ||||||| ||||| ||||||||| ||||||||||    
T  15428775 tgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcat 15428835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3154247 - 3154193
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgt 55  Q
    ||||||||| |||| ||| |||||||||| || || |||||||||||||||||||    
T  3154247 aaagagaaactgtgtttgggcgggatccatgtgaccacgtgtcagatttttgtgt 3154193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 16136900 - 16136855
Alignment:
Q  346 ctaggttattcaaagctagatactttcccactagtgattactttgc 391  Q
    ||||| |||||||||||||||| || || |||||||||||||||||    
T  16136900 ctaggctattcaaagctagatatttccctactagtgattactttgc 16136855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44152031 - 44151928
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggat---ccacgtaactacgtgtcaga-tttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgta 96  Q
    |||||||||||||||||||| |||||   | || |||| |||||||||| ||||| ||| ||||| |||  |||||||| ||||||  | ||||||||||    
T  44152031 aaagagaaagtgtgcttgtgtgggattcactacataaccacgtgtcagattttttttgtaggtgttaaagagtgtattgtcacctatagttgtctatgta 44151932  T
Q  97 tcat 100  Q
    ||||    
T  44151931 tcat 44151928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 5e-42; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 14548026 - 14547919
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  14548026 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctt 14547927  T
Q  101 tattctta 108  Q
    || |||||    
T  14547926 tactctta 14547919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5957934 - 5957833
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  5957934 aaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcat 5957835  T
Q  101 ta 102  Q
    ||    
T  5957834 ta 5957833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 37038579 - 37038482
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  37038579 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatta 37038482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 34012292 - 34012402
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  34012292 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 34012391  T
Q  101 tattcttaaaa 111  Q
    || || |||||    
T  34012392 tactcataaaa 34012402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 504117 - 504218
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  504117 aaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 504216  T
Q  101 ta 102  Q
    ||    
T  504217 ta 504218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12831151 - 12831050
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  12831151 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 12831052  T
Q  101 ta 102  Q
    ||    
T  12831051 ta 12831050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15197437 - 15197336
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  15197437 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 15197338  T
Q  101 ta 102  Q
    ||    
T  15197337 ta 15197336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1179936 - 1180037
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  1179936 aaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 1180035  T
Q  101 ta 102  Q
    ||    
T  1180036 ta 1180037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23122593 - 23122694
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  23122593 aaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcat 23122692  T
Q  101 ta 102  Q
    ||    
T  23122693 ta 23122694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 10621083 - 10621182
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  10621083 aaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40423939 - 40424040
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||    
T  40423939 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcat 40424038  T
Q  101 ta 102  Q
    ||    
T  40424039 ta 40424040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15048178 - 15048276
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  15048178 aaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 15048276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43414577 - 43414676
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||||||||||| || || |||||| |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  43414577 aaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcat 43414676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 10284627 - 10284726
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||  |||||||| ||| ||||| ||||||||||||||    
T  10284627 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcat 10284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44507083 - 44507184
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||||||||| |||  ||||||| |||||||||| ||||||||||||||    
T  44507083 aaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcat 44507182  T
Q  101 ta 102  Q
    ||    
T  44507183 ta 44507184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8841428 - 8841512
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 85  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  8841428 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4854859 - 4854966
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||| || |||| ||  | || | |||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  4854859 aaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 4854958  T
Q  101 tattctta 108  Q
    || |||||    
T  4854959 tactctta 4854966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9122289 - 9122198
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||          |||||||||||||||||| ||||||||||||||    
T  9122289 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgg----------gtgtattgccacctaagggtgtctatgtatcat 9122200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16383481 - 16383382
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  16383481 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 16383382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 20074966 - 20075031
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||| |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcatta 20075031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24307789 - 24307902
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || | |||||||||||||||||||||||  | ||||||||||||||||| ||| ||||||||||    
T  24307789 aaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcat 24307888  T
Q  101 tattcttaaaataa 114  Q
     | |||||||||||    
T  24307889 aactcttaaaataa 24307902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30479470 - 30479569
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||| | ||||  || | || |||||||||||| ||||| ||||||| ||||||||||||||||||| ||| ||||||||||    
T  30479470 aaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcat 30479569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 34307320 - 34307221
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| | ||  |  | || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  34307320 aaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 34307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42221619 - 42221513
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||  ||| ||||  | | ||||||||||||||||||||||||||| |    ||||||| ||||||||||||| ||||||||||    
T  42221619 aaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcat 42221520  T
Q  101 tattctt 107  Q
    || ||||    
T  42221519 tactctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16056397 - 16056496
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  | ||||||| ||| ||||||||| ||||||||||    
T  16056397 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcat 16056496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17443929 - 17443830
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||  ||||| ||| ||||| | ||||| ||||||||||||||||| |||| ||   |||||||| ||||||||| ||||||||||||||    
T  17443929 aaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcat 17443830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15258925 - 15259038
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| ||||||||||| || ||||||| || || |||||||||||| ||||| |||| |  | |||||||||| |||||  | ||||||||||||    
T  15258925 aaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcat 15259024  T
Q  101 tattcttaaaataa 114  Q
     | |||||||||||    
T  15259025 aactcttaaaataa 15259038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32032828 - 32032730
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| ||||||| |||||||  |  | || |||||||||||||||||| ||||||  | ||||||||||||||||| ||| ||||||||||    
T  32032828 aaagagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtcaag-gatgtattgccacctaagggtgtttatgtatcat 32032730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 24307692 - 24307634
Alignment:
Q  42 tcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||  | ||||||||||||||||| ||| ||||||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcat 24307634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 13970102 - 13970163
Alignment:
Q  115 cgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaac 178  Q
    |||||||||||||| ||||||||   |||||||||||||| |||| ||||||||||||||||||    
T  13970102 cgtttgagcttatagcttatcata--ttttcttccatttttacccttatcattttaattaaaac 13970163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 14055613 - 14055687
Alignment:
Q  26 tccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||| ||||| ||| |||||||||||||| ||||||   |||||||| ||||||||| |||| |||||||||    
T  14055613 tccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcat 14055687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38229532 - 38229470
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtca 63  Q
    ||||||||| ||||||||| | | |||||||| || || ||||||||||||||||||||||||    
T  38229532 aaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtca 38229470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 25838252 - 25838202
Alignment:
Q  50 ttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||| |||||||  |||||||||||||||||||| ||||| ||||||    
T  25838252 ttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcat 25838202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 5e-42; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 54868891 - 54868998
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  54868891 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 54868990  T
Q  101 tattctta 108  Q
    || |||||    
T  54868991 tactctta 54868998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 49607518 - 49607412
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  49607518 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 49607419  T
Q  101 tattctt 107  Q
    || ||||    
T  49607418 tactctt 49607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 53982115 - 53982014
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  53982115 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 53982016  T
Q  101 ta 102  Q
    ||    
T  53982015 ta 53982014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33644304 - 33644203
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  33644304 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcat 33644205  T
Q  101 ta 102  Q
    ||    
T  33644204 ta 33644203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 52629404 - 52629305
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  52629404 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8076497 - 8076396
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||    
T  8076497 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcat 8076398  T
Q  101 ta 102  Q
    ||    
T  8076397 ta 8076396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17470509 - 17470408
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||||    
T  17470509 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcat 17470410  T
Q  101 ta 102  Q
    ||    
T  17470409 ta 17470408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 27714888 - 27714993
Alignment:
Q  2 aagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatt 101  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  102 attctt 107  Q
    | ||||    
T  27714988 actctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31456793 - 31456692
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||    
T  31456793 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcat 31456694  T
Q  101 ta 102  Q
    ||    
T  31456693 ta 31456692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 48587087 - 48587187
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||| | ||||||||||||    
T  48587087 aaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcat 48587186  T
Q  101 t 101  Q
    |    
T  48587187 t 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 26141528 - 26141627
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| |||| || || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  26141528 aaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26141627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11095351 - 11095457
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| || |||||| |  |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11095351 aaagagaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 11095448  T
Q  101 tattcttaa 109  Q
    || ||||||    
T  11095449 tactcttaa 11095457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33118847 - 33118955
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| || || ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  33118847 aaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 33118946  T
Q  101 tattcttaa 109  Q
     | ||||||    
T  33118947 aactcttaa 33118955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36707424 - 36707526
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| | ||||||||||||    
T  36707424 aaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcat 36707519  T
Q  101 tattctt 107  Q
    || ||||    
T  36707520 tactctt 36707526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41189760 - 41189859
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| |||| ||  | |||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  41189760 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcat 41189859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 24699950 - 24700060
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| |||| | || |||||||  | ||||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  24699950 aaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcat 24700049  T
Q  101 tattcttaaaa 111  Q
    || ||| ||||    
T  24700050 tactctaaaaa 24700060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14623835 - 14623936
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| | | ||||| | |  || |||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  14623835 aaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcat 14623934  T
Q  101 ta 102  Q
    ||    
T  14623935 ta 14623936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35536730 - 35536629
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||| |||||||||||||   | ||||| | || |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35536730 aaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcat 35536631  T
Q  101 ta 102  Q
    ||    
T  35536630 ta 35536629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11347918 - 11348017
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| ||| || |||| ||  | ||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||    
T  11347918 aaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcat 11348017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 20764911 - 20765010
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| |||| |||| ||  | ||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||| ||||    
T  20764911 aaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcat 20765010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26754799 - 26754700
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||||||||||||| |||| || || || |||||||||||||||||| |||| || ||||||||||||||||||| |||||||| |||||    
T  26754799 aaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 51419356 - 51419455
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||||||||||||||| ||| | ||||||| || |||||||||||||||||||||    
T  51419356 aaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcat 51419455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13898051 - 13898152
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| | | ||||| | |  ||||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||| ||||||    
T  13898051 aaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcat 13898150  T
Q  101 ta 102  Q
    ||    
T  13898151 ta 13898152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 47531969 - 47531870
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| | ||  |  | |||||||||||| |||||||| ||| ||| |||||||||||| |||||||||||||||||||||    
T  47531969 aaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcat 47531870  T

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Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30801729 - 30801829
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||||||||| ||| ||||  | ||||| ||||| |||||||||||||| ||||| ||||||||  ||||||||| ||||||||||||||    
T  30801729 aaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcat 30801828  T
Q  101 t 101  Q
    |    
T  30801829 t 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 9563101 - 9563002
Alignment:
Q  3 agagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||||| | ||| ||||||| | ||||||| || |||| | ||| ||||||||||||    
T  9563101 agagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcatta 9563002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 8956830 - 8956765
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||| |||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  8956830 acgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcatta 8956765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35965778 - 35965877
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||| ||||||||||        ||||||||||| ||||||||||||| | ||||||  ||| ||||||||| ||||||||||    
T  35965778 aaagagaaagtgtgcttgtgcaggatccacgt--------gtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcat 35965869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 25407143 - 25407248
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagattttt-gtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatca 99  Q
    |||||||||||||| ||||| ||||||||  | |  ||||||||||||||| ||||| |||||||  ||| |||||||||||| || ||| |||||||||    
T  25407143 aaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatca 25407242  T
Q  100 ttattc 105  Q
    ||||||    
T  25407243 ttattc 25407248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41080811 - 41080712
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||||||||| ||| ||||| | || || | ||||||||||| |||||||||||| ||||| |||| || ||||||||||||||||||||    
T  41080811 aaagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgctac-taaggatgtctatgtatcat 41080714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 37489948 - 37489887
Alignment:
Q  115 cgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaac 178  Q
    |||||||||||||| ||| |||||  ||||||||||||||||||| ||||||||||||||||||    
T  37489948 cgtttgagcttatagcttctcatt--ttttcttccattttaacccttatcattttaattaaaac 37489887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11907475 - 11907376
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||||||||||||| ||||  | || || ||||||||||||||||| ||||  |   |||||||| ||||||||| ||||||||||||||    
T  11907475 aaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcat 11907376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36331325 - 36331407
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaa 83  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  |||| ||||||||||||    
T  36331325 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 35093688 - 35093592
Alignment:
Q  2 aagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatc 98  Q
    ||||||||||||||||||  ||  | ||| | || || ||||||||||||| |||| ||||||||| ||||||| ||||||| | ||||||||||||    
T  35093688 aagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 45058588 - 45058647
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  45058588 tgtcagatttttatgtgggtgtcaag-ggtgtattgccacctaagggtgtttatgtatcat 45058647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1758452 - 1758553
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaa--atggtgtattgccacctaaggatgtctatgtatc 98  Q
    ||||||||| |||| ||||| ||  |||||||||| |  |||||||||||||||||||||||||    |||||||||| ||||| || || |||||||||    
T  1758452 aaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatc 1758551  T
Q  99 at 100  Q
    ||    
T  1758552 at 1758553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 21746212 - 21746280
Alignment:
Q  36 tacgtgtcagatttttgtgtggg--tgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||||||||||||||||||  |||| |    ||||||||||||||||||||| ||||||||||||    
T  21746212 tacgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcatta 21746280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 20450617 - 20450677
Alignment:
Q  141 ttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 201  Q
    |||| ||||||||  |||| ||| |||||||||||||||||| |||||| |||||||||||    
T  20450617 ttttattccatttctacccttattattttaattaaaacttatatttaccctttataattta 20450677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48375702 - 48375801
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||||||||||||| |||| || || ||  ||||||||||||| ||| | |  |  ||||||||| ||||||||| |||||||| |||||    
T  48375702 aaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcat 48375801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 42217788 - 42217875
Alignment:
Q  112 taacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 201  Q
    ||||||||||||||||| ||| ||||  ||| |||  |||||| |||| ||| |||||||||||||   ||||||||| |||||||||||    
T  42217788 taacgtttgagcttatagcttctcatattttatct--catttttacccttattattttaattaaaatccatgtttaccctttataattta 42217875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 44947212 - 44947157
Alignment:
Q  121 agcttataacttatcattatttttcttccattttaacccatatcattttaattaaaac 178  Q
    |||||||| ||||||||   |||||||||||||| |||| ||||||||||||||||||    
T  44947212 agcttatagcttatcatc--ttttcttccatttttacccttatcattttaattaaaac 44947157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 36331416 - 36331473
Alignment:
Q  43 cagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||| ||||||  |||| ||||||| |||||| ||| ||||||||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcat 36331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 42823215 - 42823102
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||| | ||| |||||| ||||  | || || ||||| |||||| ||||||||||||  |||||||| |||| ||| | ||| ||||||||||    
T  42823215 aaagagaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T
Q  101 tattcttaaaataa 114  Q
     |||| || |||||    
T  42823115 aattcctataataa 42823102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 25395368 - 25395428
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| | ||  | ||||| ||||| ||||||||| ||||||||||    
T  25395368 tgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatcat 25395428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 52629951 - 52629994
Alignment:
Q  35 ctacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccac 79  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||    
T  52629951 ctacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 52629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 8e-41; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27564731 - 27564832
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27564731 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcat 27564830  T
Q  101 ta 102  Q
    ||    
T  27564831 ta 27564832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44548372 - 44548473
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  44548372 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcat 44548471  T
Q  101 ta 102  Q
    ||    
T  44548472 ta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 51898683 - 51898780
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  51898683 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcatta 51898780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 2582015 - 2581913
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattatt 104  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 2581916  T
Q  105 ctt 107  Q
    |||    
T  2581915 ctt 2581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9474872 - 9474973
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  9474872 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 9474971  T
Q  101 ta 102  Q
    ||    
T  9474972 ta 9474973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 47452316 - 47452417
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  47452316 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 47452415  T
Q  101 ta 102  Q
    ||    
T  47452416 ta 47452417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 48716278 - 48716379
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  48716278 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcat 48716377  T
Q  101 ta 102  Q
    ||    
T  48716378 ta 48716379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8346384 - 8346490
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||    
T  8346384 aaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcat 8346483  T
Q  101 tattctt 107  Q
    || ||||    
T  8346484 tactctt 8346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3000423 - 3000322
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  3000423 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 3000324  T
Q  101 ta 102  Q
    ||    
T  3000323 ta 3000322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32813351 - 32813252
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| |||| || || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  32813351 aaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 32813252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38595258 - 38595152
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||||||    
T  38595258 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcat 38595159  T
Q  101 tattctt 107  Q
    || ||||    
T  38595158 tactctt 38595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38632317 - 38632423
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||    
T  38632317 aaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcat 38632416  T
Q  101 tattctt 107  Q
    || ||||    
T  38632417 tactctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37649302 - 37649201
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||| |||||||||||||||||| || ||||| || |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  37649302 aaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcat 37649203  T
Q  101 ta 102  Q
    ||    
T  37649202 ta 37649201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50630562 - 50630461
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||| | ||||||||||||||||| | ||||||||||||    
T  50630562 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcat 50630463  T
Q  101 ta 102  Q
    ||    
T  50630462 ta 50630461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26274536 - 26274429
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| ||||||| ||||||| |||||||||| |||| ||||||||||||| ||||| ||||||||| ||||||||||| ||||| ||||||||||||||    
T  26274536 aaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcat 26274437  T
Q  101 tattctta 108  Q
    ||||||||    
T  26274436 tattctta 26274429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 43236 - 43135
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||| | ||||||| | ||||||  ||||||||||||||    
T  43236 aaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcat 43137  T
Q  101 ta 102  Q
    ||    
T  43136 ta 43135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41758909 - 41758808
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||||||| |||| || |||||||||||||||||||||||| ||||||| ||||||||||||  ||| | ||||||||||||||    
T  41758909 aaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcat 41758810  T
Q  101 ta 102  Q
    ||    
T  41758809 ta 41758808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 49811523 - 49811622
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||  || |  |  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  49811523 aaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcat 49811622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 45044556 - 45044666
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||| ||||||||| |||| ||  |||| |||||||||||||| ||||||||||||||||||||||||||||||||  | ||||||||||    
T  45044556 aaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcat 45044655  T
Q  101 tattcttaaaa 111  Q
     | ||||||||    
T  45044656 aactcttaaaa 45044666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 26440838 - 26440741
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatc 98  Q
    ||||||||||||||||| ||||||||||| ||  | ||||||||||||||||||||||||| ||| ||||||||| || |||||||||||||| ||||    
T  26440838 aaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44454083 - 44453984
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||  | ||||||||||| ||| | ||||||||||||||    
T  44454083 aaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 11152378 - 11152474
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||| ||||||||||||| || || | |||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||| ||||||    
T  11152378 agaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg-tgtctatgtttcatta 11152474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5958996 - 5959095
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  | || || |||||||||||||||||||||||||  ||||||||||||| ||||| ||| ||||||||||    
T  5958996 aaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcat 5959095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37926434 - 37926533
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| ||||| ||||||||| ||  | ||||||||||||||| ||||||||| ||| | ||||||||||||||| ||| ||||||||||||    
T  37926434 aaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcat 37926533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 50590996 - 50591095
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  50590996 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 50591095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13414865 - 13414791
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattg 75  Q
    ||||||||| |||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  13414865 aaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41608489 - 41608588
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| ||||| |||| ||||  |  | || ||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||    
T  41608489 aaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 41608588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 23597123 - 23597193
Alignment:
Q  37 acgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcattattctt 107  Q
    ||||||||||||||| ||||||| |||||  |||||||||||||||| |||||||||||||||||| ||||    
T  23597123 acgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactctt 23597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 3302533 - 3302630
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    |||||||||||||||  ||| ||||  | | ||||||||||||||||||||||||||| |    | ||||| ||||||||||||| ||||||||||||    
T  3302533 agaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcatta 3302630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 48489400 - 48489343
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtc 62  Q
    ||||| |||||||||||||||||||||| || || |||||||||||||||||| ||||    
T  48489400 agaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 6260970 - 6260875
Alignment:
Q  5 agaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||| ||||||| |||||| ||||||| || || ||| |||||||| |||||||||  |  |||||||| |||||||||||| ||||| ||||||    
T  6260970 agaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcat 6260875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 47748546 - 47748448
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||| | |||||||||||||||  |  | || |||||||||||| | ||||||||||  ||||||||||||||||||| | | ||||||||||    
T  47748546 aaagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaag-ggtgtattgccacctaagggtatttatgtatcat 47748448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 14127049 - 14127127
Alignment:
Q  318 atactcacgcaaactgaatctttaatcgctaggttattcaaagctagatactttcccactagtgattactttgcagcag 396  Q
    ||||||||| || ||| |||||||||| ||||  || |||||||||||||||| |||| ||||||||| ||||| ||||    
T  14127049 atactcacgtaacctggatctttaatcactagactactcaaagctagatacttccccaatagtgattattttgctgcag 14127127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 31259587 - 31259543
Alignment:
Q  109 aaataacgtttgagcttataacttatcattatttttcttccattt 153  Q
    ||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  31259587 aaatagcgtttgagcttatagcttatcattttttttcttctattt 31259543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 5e-39; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 22880654 - 22880756
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  22880654 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 22880753  T
Q  101 tat 103  Q
    |||    
T  22880754 tat 22880756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 32869782 - 32869672
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |    
T  32869782 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctt 32869683  T
Q  101 tattcttaaaa 111  Q
    || || |||||    
T  32869682 tactcataaaa 32869672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17598658 - 17598557
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  17598658 aaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 17598559  T
Q  101 ta 102  Q
    ||    
T  17598558 ta 17598557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29857931 - 29857830
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| | ||||||||||||||    
T  29857931 aaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcat 29857832  T
Q  101 ta 102  Q
    ||    
T  29857831 ta 29857830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11427722 - 11427619
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta--aggatgtctatgtatc 98  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||  ||| ||||||||||||    
T  11427722 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatc 11427623  T
Q  99 atta 102  Q
    ||||    
T  11427622 atta 11427619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6209461 - 6209572
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||| ||||||| ||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  6209461 aaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcat 6209560  T
Q  101 tattcttaaaat 112  Q
    || |||| ||||    
T  6209561 tactctttaaat 6209572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31976352 - 31976253
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||| | || || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  31976352 aaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcat 31976253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23128123 - 23128229
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | ||||||  ||| ||| | ||||||| ||||||    
T  23128123 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcat 23128222  T
Q  101 tattctt 107  Q
    |||||||    
T  23128223 tattctt 23128229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31109396 - 31109497
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| ||| |||||| || |||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||  |||||    
T  31109396 aaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcat 31109495  T
Q  101 ta 102  Q
    ||    
T  31109496 ta 31109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28536484 - 28536589
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||| ||| ||||| | ||  |||||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||    
T  28536484 aaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T
Q  101 tattctta 108  Q
    | ||||||    
T  28536582 ttttctta 28536589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15832681 - 15832575
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||  |||||| |||||||||| ||||||||||| |||||||||||||||||||||| | ||||| ||||||| | ||||||||||||||    
T  15832681 aaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcat 15832582  T
Q  101 tattctt 107  Q
    || ||||    
T  15832581 tactctt 15832575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 31110757 - 31110854
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||||| || |||| ||   ||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||    
T  31110757 aaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcat 31110854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 946480 - 946383
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatc 98  Q
    |||||||||||||||| | |||||||  |||| |||| |||||||||||||| || ||||||||| ||||||||  ||||||||||||||||||||||    
T  946480 aaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15508020 - 15508119
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  15508020 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15990038 - 15990137
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  15990038 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15990137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30341356 - 30341455
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  30341356 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 30341455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12732586 - 12732480
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| ||||||| || ||||||||| || | ||||||||||||||||||||||||||||    | ||||||||| |||| |||||||||||||||    
T  12732586 aaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcat 12732487  T
Q  101 tattctt 107  Q
    || ||||    
T  12732486 tactctt 12732480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31953026 - 31953127
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||| ||||| | | ||||| | |  || |||||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  31953026 aaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcat 31953125  T
Q  101 ta 102  Q
    ||    
T  31953126 ta 31953127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4231652 - 4231553
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||| |||||||||| ||||  |  | |||||||||||||||||||||||| |||  ||||||||||||||||| ||||| |||| |||||    
T  4231652 aaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcat 4231553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9379708 - 9379807
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| |||| ||||| | ||||||| |  | |||||||| |||||||| ||||||||||  | ||||||| || |||||||||||||||||||||    
T  9379708 aaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 22422053 - 22422115
Alignment:
Q  40 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcatta 102  Q
    ||||||| |||||| || |||||||  | | ||||||||||||||||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcatta 22422115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 20584427 - 20584517
Alignment:
Q  109 aaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaacttatgtttaccttttataattta 201  Q
    |||||||||||||| |||||| |||||||  ||||||||||| ||| |||  | | ||||||  ||||| |||| ||||||| ||||||||||    
T  20584427 aaataacgtttgagtttataatttatcat--tttttcttccaattttacctttgttattttatctaaaatttatttttacctattataattta 20584517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4133 - 4032
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| | ||||||||||||||    
T  4133 aaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcat 4034  T
Q  101 ta 102  Q
    ||    
T  4033 ta 4032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 925 - 1026
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||    
T  925 aaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcat 1024  T
Q  101 ta 102  Q
    ||    
T  1025 ta 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 925 - 1026
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||    
T  925 aaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcat 1024  T
Q  101 ta 102  Q
    ||    
T  1025 ta 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 249676 - 249571
Alignment:
Q  494 gccgcataccaagcagtggcattatgaaaatattggcattctgtttggcagcatgtcagctcatcaaatatgccgaactcccctacttcacttggttcaa 593  Q
    |||||||||||||||| ||||||  ||||||||||||||||| ||||||||  ||| |||||||||||||||||| | ||||||||| |||| |||||||    
T  249676 gccgcataccaagcagcggcattcggaaaatattggcattctatttggcagtgtgttagctcatcaaatatgccggagtcccctactacactcggttcaa 249577  T
Q  594 actgat 599  Q
    ||||||    
T  249576 actgat 249571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 10105 - 10204
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||||||||||||| || | ||||||| |||||||||||||||||| ||||| ||||||| | ||||||||||||||| | ||||||||||||||    
T  10105 aaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcat 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8859 - 8958
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggatgtctatgtatcat 100  Q
    ||||||||| ||| |||||| ||| ||||||| |||| |||||| |||||||||| | |||||||| |||||||| ||| ||||||||||||| ||||||    
T  8859 aaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcat 8958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 152602 - 152518
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 85  Q
    |||||||||||||  ||||||||||||||  | || || |||||||||||||||||||||||||  |||||||||||||| ||||    
T  152602 aaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 11843 - 11910
Alignment:
Q  109 aaataacgtttgagcttataacttatcattatttttcttccattttaacccatatcattttaattaaaac 178  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||||| | || ||||||||| ||||||||    
T  11843 aaatagcgtttgagcttataacttatcat--tttttattccatttttatccttatcatttttattaaaac 11910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17158 - 17097
Alignment:
Q  1 aaagagaaagtgtgcttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtc 62  Q
    ||||||||| |||||||||||||| |||| || || || |||||||||||||||||| ||||    
T  17158 aaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtc 17097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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