View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14353_low_17 (Length: 537)

Name: NF14353_low_17
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14353_low_17
NF14353_low_17
[»] chr8 (28 HSPs)
chr8 (129-522)||(28390825-28391217)
chr8 (1-130)||(37430237-37430367)
chr8 (28-130)||(20003839-20003942)
chr8 (65-130)||(2952473-2952538)
chr8 (65-130)||(5860996-5861061)
chr8 (65-130)||(30883110-30883175)
chr8 (65-118)||(3048774-3048827)
chr8 (72-128)||(41878167-41878223)
chr8 (1-45)||(2952300-2952344)
chr8 (1-45)||(13534765-13534809)
chr8 (1-45)||(13624305-13624349)
chr8 (1-45)||(30883309-30883353)
chr8 (78-124)||(10917200-10917246)
chr8 (64-118)||(45472203-45472257)
chr8 (1-41)||(23606708-23606748)
chr8 (1-41)||(23798340-23798380)
chr8 (1-41)||(42600766-42600806)
chr8 (82-130)||(45294597-45294645)
chr8 (1-41)||(45475801-45475841)
chr8 (78-124)||(42600590-42600636)
chr8 (1-45)||(3048596-3048640)
chr8 (1-41)||(10917375-10917415)
chr8 (1-45)||(41879161-41879205)
chr8 (82-136)||(33978672-33978726)
chr8 (99-136)||(33963532-33963569)
chr8 (99-131)||(1176260-1176292)
chr8 (1-45)||(5860823-5860867)
chr8 (78-118)||(23606869-23606909)
[»] chr4 (50 HSPs)
chr4 (1-131)||(5128920-5129050)
chr4 (1-116)||(1105445-1105561)
chr4 (1-130)||(37514558-37514688)
chr4 (5-132)||(32915295-32915410)
chr4 (64-131)||(45560704-45560771)
chr4 (64-130)||(10431442-10431508)
chr4 (65-131)||(55255079-55255145)
chr4 (64-133)||(47127978-47128047)
chr4 (64-127)||(17679220-17679283)
chr4 (64-132)||(48208448-48208516)
chr4 (65-114)||(38209842-38209891)
chr4 (1-45)||(10428283-10428327)
chr4 (64-128)||(13459786-13459850)
chr4 (70-111)||(9579475-9579516)
chr4 (70-111)||(9585170-9585211)
chr4 (1-45)||(10978885-10978929)
chr4 (1-45)||(38209669-38209713)
chr4 (1-45)||(47128972-47129016)
chr4 (1-45)||(55255254-55255298)
chr4 (64-118)||(27596639-27596693)
chr4 (64-114)||(34769533-34769583)
chr4 (83-132)||(10978142-10978191)
chr4 (1-45)||(13460192-13460236)
chr4 (1-41)||(16845010-16845050)
chr4 (1-45)||(23509876-23509920)
chr4 (1-41)||(24969426-24969466)
chr4 (5-45)||(34768656-34768696)
chr4 (1-41)||(40089505-40089545)
chr4 (1-45)||(48209225-48209269)
chr4 (71-118)||(54779453-54779500)
chr4 (86-127)||(23510922-23510963)
chr4 (64-117)||(35780556-35780609)
chr4 (64-121)||(37777459-37777516)
chr4 (78-118)||(16844839-16844879)
chr4 (1-41)||(19498493-19498533)
chr4 (78-118)||(24969254-24969294)
chr4 (78-118)||(32128404-32128444)
chr4 (1-41)||(34027568-34027608)
chr4 (1-41)||(38352333-38352373)
chr4 (1-37)||(43455609-43455645)
chr4 (1-41)||(54083320-54083360)
chr4 (1-36)||(54780771-54780806)
chr4 (3-41)||(35465096-35465134)
chr4 (78-124)||(54083492-54083538)
chr4 (1-33)||(2790819-2790851)
chr4 (78-118)||(2790988-2791028)
chr4 (1-41)||(32128573-32128613)
chr4 (5-41)||(35779407-35779443)
chr4 (1-41)||(37777301-37777341)
chr4 (78-114)||(40089340-40089376)
[»] chr1 (37 HSPs)
chr1 (1-130)||(3406323-3406453)
chr1 (1-130)||(3440367-3440497)
chr1 (1-130)||(14146205-14146335)
chr1 (1-130)||(41697215-41697345)
chr1 (1-130)||(16139960-16140090)
chr1 (1-118)||(6771708-6771826)
chr1 (10-131)||(6888468-6888590)
chr1 (65-130)||(27906949-27907014)
chr1 (65-131)||(44655538-44655604)
chr1 (84-130)||(50880568-50880614)
chr1 (1-45)||(5316671-5316715)
chr1 (1-45)||(27906795-27906839)
chr1 (1-45)||(44655732-44655776)
chr1 (72-119)||(5027982-5028029)
chr1 (64-118)||(10912094-10912148)
chr1 (1-42)||(50881424-50881465)
chr1 (1-41)||(4971696-4971736)
chr1 (1-41)||(9173101-9173141)
chr1 (1-41)||(9181083-9181123)
chr1 (1-41)||(23185422-23185462)
chr1 (1-41)||(40501868-40501908)
chr1 (78-124)||(13913730-13913776)
chr1 (64-118)||(23181723-23181777)
chr1 (78-124)||(40502038-40502084)
chr1 (1-38)||(27559635-27559672)
chr1 (1-41)||(1366956-1366996)
chr1 (78-118)||(1367125-1367165)
chr1 (1-41)||(13913560-13913600)
chr1 (1-41)||(19955712-19955752)
chr1 (78-118)||(44895479-44895519)
chr1 (5-41)||(44895647-44895683)
chr1 (83-121)||(4977929-4977967)
chr1 (82-132)||(12037587-12037637)
chr1 (78-119)||(27559458-27559499)
chr1 (1-41)||(5027544-5027584)
chr1 (78-118)||(9173269-9173309)
chr1 (1-41)||(17168951-17168991)
[»] chr5 (27 HSPs)
chr5 (1-131)||(15480165-15480296)
chr5 (1-131)||(19523092-19523223)
chr5 (1-127)||(36187955-36188082)
chr5 (71-130)||(31881597-31881656)
chr5 (1-130)||(2274798-2274914)
chr5 (65-132)||(34756615-34756682)
chr5 (70-134)||(22987473-22987538)
chr5 (71-130)||(30853266-30853325)
chr5 (64-130)||(16592845-16592911)
chr5 (82-130)||(8433593-8433641)
chr5 (1-41)||(16198870-16198910)
chr5 (1-45)||(16592150-16592194)
chr5 (1-45)||(34756442-34756486)
chr5 (64-130)||(31194767-31194833)
chr5 (1-42)||(27078994-27079035)
chr5 (1-42)||(30854312-30854353)
chr5 (1-41)||(9364275-9364315)
chr5 (78-118)||(16199040-16199080)
chr5 (1-41)||(28822418-28822458)
chr5 (1-41)||(38869439-38869479)
chr5 (78-124)||(27923891-27923937)
chr5 (78-119)||(16799570-16799611)
chr5 (1-41)||(7670908-7670948)
chr5 (5-41)||(16799407-16799443)
chr5 (1-41)||(27924066-27924106)
chr5 (78-118)||(38869607-38869647)
chr5 (84-132)||(41842807-41842855)
[»] chr7 (21 HSPs)
chr7 (1-130)||(10955378-10955508)
chr7 (1-131)||(12596365-12596496)
chr7 (65-132)||(18777019-18777086)
chr7 (64-129)||(28749582-28749647)
chr7 (1-45)||(8171617-8171661)
chr7 (1-45)||(29077200-29077244)
chr7 (1-41)||(20091359-20091399)
chr7 (1-41)||(23551149-23551189)
chr7 (1-41)||(24525763-24525803)
chr7 (1-41)||(25010417-25010457)
chr7 (3-41)||(48983924-48983962)
chr7 (64-118)||(29076942-29076998)
chr7 (1-41)||(18776844-18776884)
chr7 (78-118)||(19691909-19691949)
chr7 (1-41)||(38414954-38414994)
chr7 (78-118)||(47985216-47985256)
chr7 (78-118)||(48984091-48984131)
chr7 (80-118)||(24525934-24525972)
chr7 (78-115)||(20091528-20091565)
chr7 (1-41)||(10329488-10329528)
chr7 (1-41)||(47985048-47985088)
[»] chr6 (27 HSPs)
chr6 (1-130)||(24711078-24711208)
chr6 (1-130)||(30832603-30832732)
chr6 (64-128)||(23070889-23070953)
chr6 (64-130)||(12083640-12083706)
chr6 (65-130)||(13727650-13727715)
chr6 (70-127)||(21280336-21280393)
chr6 (65-130)||(21479284-21479349)
chr6 (73-130)||(27314773-27314830)
chr6 (71-130)||(19741230-19741289)
chr6 (65-134)||(33773896-33773964)
chr6 (73-130)||(27579084-27579141)
chr6 (1-45)||(13727478-13727522)
chr6 (1-45)||(19737771-19737815)
chr6 (1-45)||(21479477-21479521)
chr6 (1-45)||(33774100-33774144)
chr6 (64-118)||(1156017-1156071)
chr6 (1-45)||(21280528-21280572)
chr6 (1-41)||(27788767-27788807)
chr6 (1-41)||(28075770-28075810)
chr6 (78-118)||(17353771-17353811)
chr6 (64-116)||(19986980-19987032)
chr6 (78-118)||(27788936-27788976)
chr6 (78-133)||(235473-235528)
chr6 (83-124)||(11574453-11574494)
chr6 (1-41)||(17353941-17353981)
chr6 (78-118)||(20711966-20712006)
chr6 (1-41)||(34397844-34397884)
[»] chr3 (37 HSPs)
chr3 (1-131)||(21582667-21582798)
chr3 (1-130)||(47467582-47467711)
chr3 (1-130)||(53149393-53149523)
chr3 (1-130)||(42098698-42098828)
chr3 (47-132)||(50258716-50258802)
chr3 (64-134)||(13795183-13795253)
chr3 (65-134)||(36716276-36716345)
chr3 (65-130)||(38681348-38681413)
chr3 (71-129)||(3954859-3954917)
chr3 (65-130)||(27078819-27078884)
chr3 (65-130)||(27084616-27084681)
chr3 (65-118)||(54619454-54619507)
chr3 (65-114)||(36605862-36605911)
chr3 (83-130)||(29620618-29620665)
chr3 (70-118)||(1148360-1148408)
chr3 (1-45)||(54619282-54619326)
chr3 (70-131)||(18372032-18372092)
chr3 (1-45)||(29620467-29620511)
chr3 (1-45)||(38681172-38681216)
chr3 (1-41)||(43207316-43207356)
chr3 (1-41)||(44708464-44708504)
chr3 (6-45)||(3953980-3954019)
chr3 (77-118)||(48156954-48156995)
chr3 (1-45)||(18372462-18372506)
chr3 (1-45)||(27078648-27078692)
chr3 (1-45)||(27084445-27084489)
chr3 (1-41)||(34290715-34290755)
chr3 (78-118)||(43207488-43207528)
chr3 (78-118)||(44708294-44708334)
chr3 (1-41)||(50939312-50939352)
chr3 (1-41)||(53506963-53507003)
chr3 (78-118)||(53507131-53507171)
chr3 (80-118)||(9878935-9878973)
chr3 (64-118)||(34290874-34290928)
chr3 (78-124)||(50939482-50939528)
chr3 (1-46)||(8073417-8073461)
chr3 (1-41)||(37168354-37168394)
[»] chr2 (28 HSPs)
chr2 (1-130)||(7162677-7162807)
chr2 (5-118)||(3952911-3953025)
chr2 (65-131)||(3155002-3155068)
chr2 (70-134)||(3399505-3399569)
chr2 (65-132)||(4505677-4505744)
chr2 (65-128)||(6964794-6964857)
chr2 (64-130)||(12337689-12337755)
chr2 (65-130)||(34693147-34693212)
chr2 (65-130)||(34715559-34715624)
chr2 (64-132)||(41213928-41213996)
chr2 (70-129)||(40635963-40636022)
chr2 (65-126)||(8907330-8907391)
chr2 (1-45)||(3155196-3155240)
chr2 (1-45)||(4505873-4505917)
chr2 (1-45)||(6964986-6965030)
chr2 (1-45)||(12337527-12337571)
chr2 (1-45)||(8907158-8907202)
chr2 (1-41)||(29939941-29939981)
chr2 (1-40)||(10762644-10762683)
chr2 (78-124)||(27506989-27507035)
chr2 (83-128)||(5952949-5952993)
chr2 (78-118)||(9045844-9045884)
chr2 (1-41)||(9046012-9046052)
chr2 (78-118)||(26715943-26715983)
chr2 (1-41)||(26716111-26716151)
chr2 (78-116)||(24410250-24410288)
chr2 (1-41)||(24410419-24410460)
chr2 (1-41)||(27506819-27506859)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-92)||(181851-181943)
scaffold0001 (85-130)||(181435-181480)
[»] scaffold0070 (2 HSPs)
scaffold0070 (71-130)||(1011-1070)
scaffold0070 (1-45)||(1323-1367)
[»] scaffold0039 (2 HSPs)
scaffold0039 (1-41)||(106522-106562)
scaffold0039 (78-118)||(106391-106431)


Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 129 - 522
Target Start/End: Complemental strand, 28391217 - 28390825
Alignment:
Q  129 tgattacaccaacataaaatttgttttaaacgtacaaacaagtgaaatgtaaaagtt-atacctctggaaagtacttttactaagattttgttctccagg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  28391217 tgattacaccaacataaaatttgttttaaacgtacaaacaagtgaaatgtaaaagtttatacctctggaaagtacttttactaagattttgctctccagg 28391118  T
Q  228 ttcattccaaacaatgtcgaagtacctataaataaatatgattgaataacacgttaaattcagtcaattaaacttaaaattacaattacttatcttctga 327  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28391117 ttcattccaaacaacgtcgaagtacctataaataaatatgattgaataacacgttaaattcagtcaattatacttaaaattacaattacttatcttctga 28391018  T
Q  328 tcgaactttgaattagtaaaacattttttccttatgaactagagggttgacatacnnnnnnnntataagacgcaaaatattttag-tttttgaggatcgt 426  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||||||         ||||| || ||||||||||||| ||||||||||||||    
T  28391017 tcgaactttgaattagtagaatattttttcctaatgaactagagggttgacata-aaaaaaaatataatacacaaaatattttagttttttgaggatcgt 28390919  T
Q  427 gcatnnnnnnnttaaacttctatttattctaaactttacttcattatttaaacccacacttaaatttaactaggttgatatgaagtaggaacatac 522  Q
    ||||       |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28390918 gcat--aaatattaaacttctatttatcctaaactttacttcattatttaaacccacacttaaatttaactagtttgatatgaagtaggaacatac 28390825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 37430237 - 37430367
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||||| ||||||||    
T  37430237 tgactaccgtatacatgaggaaccctcacgtaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttaaggaaggcccaactcgtttg 37430336  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||    
T  37430337 agctgtttgcaccccctcaaggacgcccctg 37430367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 20003839 - 20003942
Alignment:
Q  28 acctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcc 126  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20003839 acctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcc 20003938  T
Q  127 cctg 130  Q
    ||||    
T  20003939 cctg 20003942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 2952473 - 2952538
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2952473 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 2952538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 5860996 - 5861061
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5860996 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 5861061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 30883175 - 30883110
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  30883175 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccactcagggacgcccctg 30883110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 3048774 - 3048827
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3048774 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 3048827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 41878223 - 41878167
Alignment:
Q  72 catccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccc 128  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  41878223 catccttgagggaggctcaactcgtttgagctgtttgcaccccctcaaggacgcccc 41878167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2952300 - 2952344
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  2952300 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 2952344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13534765 - 13534809
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  13534765 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 13534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13624305 - 13624349
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  13624305 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 13624349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30883353 - 30883309
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  30883353 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 30883309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 10917246 - 10917200
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  10917246 tgagggaggcccagctctgttgagctgtttgcaccccctcaaggacg 10917200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 45472257 - 45472203
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  45472257 ttgaggcccatccttgggggtggcccagctcggttgagctgtttgcaccccctca 45472203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23606708 - 23606748
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  23606708 tgactaccgtatacatgaggaacccccacctaacaccaaaa 23606748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23798340 - 23798380
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  23798340 tgactaccgtatacatgaggaacccccacctaacaccaaaa 23798380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42600806 - 42600766
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  42600806 tgactaccgtatacatgaggaacccccacctaacaccaaaa 42600766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 45294597 - 45294645
Alignment:
Q  82 ggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||| || |||||||||||||||||||||||||| |||||    
T  45294597 ggaggcccagctcattagagctgtttgcaccccctcaaggacggccctg 45294645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45475841 - 45475801
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  45475841 tgactaccgtatacatgaggaacccccacctaacaccaaaa 45475801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 42600636 - 42600590
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||    
T  42600636 tgagggaggcccagctctgttgagctgtttgcaccccctcagggacg 42600590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3048596 - 3048640
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||    
T  3048596 tgactaccgtatacacgaggaaccctcacctaacaccaaaatcaa 3048640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10917415 - 10917375
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  10917415 tgactaccttatacatgaggaacccccacctaacaccaaaa 10917375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41879205 - 41879161
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||    
T  41879205 tgactaccgaatacatgagaaacccccacctaacaccaaaatcaa 41879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 33978672 - 33978726
Alignment:
Q  82 ggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgattaca 136  Q
    |||||| ||||||  | ||||||||||||||||||||||| || |||||||||||    
T  33978672 ggaggctcagctcagtagagctgtttgcaccccctcaaggccggccctgattaca 33978726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 33963532 - 33963569
Alignment:
Q  99 gagctgtttgcaccccctcaaggacgcccctgattaca 136  Q
    ||||||||||||||||||||||| || |||||||||||    
T  33963532 gagctgtttgcaccccctcaaggccggccctgattaca 33963569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 1176260 - 1176292
Alignment:
Q  99 gagctgtttgcaccccctcaaggacgcccctga 131  Q
    |||||||||||||||||||||||||| ||||||    
T  1176260 gagctgtttgcaccccctcaaggacggccctga 1176292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5860823 - 5860867
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||| |||||||||| |||| | ||||||||||||||||||    
T  5860823 tgactaccatatacatgagaaaccccaacctaacaccaaaatcaa 5860867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 23606869 - 23606909
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  23606869 tgagggaggcccaactctgttgagctgtttgcaccccctca 23606909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 4e-58; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 5128920 - 5129050
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaaccccactcttgagacccatccttgagggaggcccagctcgtttga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  5128920 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaaccccactcttgaggcctatccttgagggaggcccagctcgtttga 5129019  T
Q  101 gctgtttgcaccccctcaaggacgcccctga 131  Q
    |||||||||||||||||| | ||||||||||    
T  5129020 gctgtttgcaccccctcaggaacgcccctga 5129050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1105561 - 1105445
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  1105561 tgactaccatatacatgagcaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttg 1105462  T
Q  100 agctgtttgcaccccct 116  Q
    |||||||||||||||||    
T  1105461 agctgtttgcaccccct 1105445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 37514688 - 37514558
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||  ||||||||||||||||||    
T  37514688 tgactaccgtatacatgaagaatccccacctaacaccaaaatcaatcatgagaaacccccactcttgaggcccatccttggaggaggcccagctcgtttg 37514589  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||||||||| |||||||||||    
T  37514588 agctgtttgcaccccctcagggacgcccctg 37514558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 32915410 - 32915295
Alignment:
Q  5 taccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaaccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 104  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||            ||  ||||||||||||||| |||||||||||||    
T  32915410 taccgtatacatgaggaacccccacctaacaccaaaatcaatcatgagggacccc------------cactcttgagggaggcccaactcgtttgagctg 32915323  T
Q  105 tttgcaccccctcaaggacgcccctgat 132  Q
    |||||||||||||| |||||||||||||    
T  32915322 tttgcaccccctcagggacgcccctgat 32915295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 45560704 - 45560771
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctga 131  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45560704 ttgaggcccatctttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctga 45560771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 10431442 - 10431508
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10431442 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 10431508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 55255145 - 55255079
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctga 131  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55255145 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctga 55255079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 47128047 - 47127978
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgatt 133  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  47128047 ttgaggcccatccttgagggaggcccagctcgtttgggctgtttgcaccccctcagggacgcccctgatt 47127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 17679283 - 17679220
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgccc 127  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  17679283 ttgaggcccatccttgagggaggctcagctcgtttgagctgtttgcaccccctcagggacgccc 17679220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 48208516 - 48208448
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||    
T  48208516 ttgaggcccatccttgagggaggcccaactcgtttgagctgtttgcaccccctcagggatgcccatgat 48208448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 38209842 - 38209891
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcacccc 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38209842 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 38209891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10428283 - 10428327
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10428283 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 10428327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 13459850 - 13459786
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccc 128  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||    
T  13459850 ttgaggcccatccttaagggaggctcagctcgtttgagctgtttgcaccccctcaggaacgcccc 13459786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 9579475 - 9579516
Alignment:
Q  70 cccatccttgagggaggcccagctcgtttgagctgtttgcac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9579475 cccatccttgagggaggcccagctcgtttgagctgtttgcac 9579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 9585170 - 9585211
Alignment:
Q  70 cccatccttgagggaggcccagctcgtttgagctgtttgcac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9585170 cccatccttgagggaggcccagctcgtttgagctgtttgcac 9585211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10978929 - 10978885
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  10978929 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 10978885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38209669 - 38209713
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  38209669 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 38209713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47129016 - 47128972
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  47129016 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 47128972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 55255298 - 55255254
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  55255298 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 55255254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 27596639 - 27596693
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||| |||||||| | |||||||||||||||||||||||||| |||||||||||    
T  27596639 ttgaggcccatcctcgggggaggcccagctcgtttgagctgttcgcaccccctca 27596693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 34769533 - 34769583
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcacccc 114  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  34769533 ttgaggcccatccttgagggaggcccaactcgtttgagctatttgcacccc 34769583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 10978191 - 10978142
Alignment:
Q  83 gaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  10978191 gaggcgcagctcgtttgagctgtttgcaccctctcagggacgcccctgat 10978142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13460236 - 13460192
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  13460236 tgactaccgtatacataaggaacccccacctaacaccaaaatcaa 13460192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16845050 - 16845010
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  16845050 tgactaccgtatacatgaggaacccccacctaacaccaaaa 16845010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23509876 - 23509920
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  23509876 tgactaccgtagacatgaggaacccccacctaacaccaaaatcaa 23509920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24969466 - 24969426
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  24969466 tgactaccgtatacatgaggaacccccacctaacaccaaaa 24969426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 34768656 - 34768696
Alignment:
Q  5 taccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  34768656 taccgtatacatgaggaacccccacctaacaccaaaatcaa 34768696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40089545 - 40089505
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  40089545 tgactaccgtatacatgaggaacccccacctaacaccaaaa 40089505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48209269 - 48209225
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||    
T  48209269 tgactaccgtatacatgagaaacccccacctaacaccaaaatcaa 48209225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 54779500 - 54779453
Alignment:
Q  71 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  54779500 ccatccttgggggaggcccagctcggttgagctgtttgcactccctca 54779453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 23510922 - 23510963
Alignment:
Q  86 gcccagctcgtttgagctgtttgcaccccctcaaggacgccc 127  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  23510922 gcccagttcgtttgagctgtttgcaccccctcagggacgccc 23510963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 35780556 - 35780609
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctc 117  Q
    ||||| || |||| || ||||||||||||||| |||||||||||||||||||||    
T  35780556 ttgaggcctatccgtgggggaggcccagctcggttgagctgtttgcaccccctc 35780609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 37777459 - 37777516
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaagg 121  Q
    ||||| |||||  |||||||||| |||||||  |||||||||||||||||||||||||    
T  37777459 ttgaggcccatgattgagggaggtccagctctgttgagctgtttgcaccccctcaagg 37777516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 16844879 - 16844839
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  16844879 tgagggaggcccagctctgttgagctgtttgcaccccctca 16844839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19498533 - 19498493
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  19498533 tgactactgtatacatgaggaacccccacctaacaccaaaa 19498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 24969294 - 24969254
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  24969294 tgagggaggcccagctctgttgagctgtttgcaccccctca 24969254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 32128444 - 32128404
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  32128444 tgagggaggcccagctctgttgagctgtttgcaccccctca 32128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34027608 - 34027568
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  34027608 tgactacggtatacatgaggaacccccacctaacaccaaaa 34027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38352333 - 38352373
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  38352333 tgactaccgtgtacatgaggaacccccacctaacaccaaaa 38352373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43455609 - 43455645
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacacc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  43455609 tgactaccgtatacatgaggaacccccacctaacacc 43455645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 54083320 - 54083360
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  54083320 tgactaccgtatacatgaggaacccctacctaacaccaaaa 54083360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 54780806 - 54780771
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  54780806 tgactaccgtatacatgaggaacccccacctaacac 54780771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 35465134 - 35465096
Alignment:
Q  3 actaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  35465134 actaccgtatacatgaggaatccccacctaacaccaaaa 35465096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 54083492 - 54083538
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    ||||||| |||||||||  |||||||||||||||||||||| |||||    
T  54083492 tgagggatgcccagctctattgagctgtttgcaccccctcagggacg 54083538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2790819 - 2790851
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  2790819 tgactaccgtatacatgaggaacccccacctaa 2790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 2790988 - 2791028
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||| ||||||||  ||||||||||||||||||||||    
T  2790988 tgagggagacccagctctgttgagctgtttgcaccccctca 2791028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32128613 - 32128573
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||| || |||| ||||||||||||||||    
T  32128613 tgactaccgtatacataagaaacccccacctaacaccaaaa 32128573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 35779407 - 35779443
Alignment:
Q  5 taccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  35779407 taccgtatacatgaggaaccttcacctaacatcaaaa 35779443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37777301 - 37777341
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||||||||||||||  || ||||||||||||    
T  37777301 tgactaccgtatacatgaggaaccctcaactaacaccaaaa 37777341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 40089376 - 40089340
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcacccc 114  Q
    |||||||||||||||||  ||||||||||||||||||    
T  40089376 tgagggaggcccagctctgttgagctgtttgcacccc 40089340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 9e-56; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3406453 - 3406323
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  3406453 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagctcgtttg 3406354  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||    
T  3406353 agctgtttgcaccccctcaaggacgcccctg 3406323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 3440367 - 3440497
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  3440367 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagctcgtttg 3440466  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||    
T  3440467 agctgtttgcaccccctcaaggacgcccctg 3440497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 14146335 - 14146205
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  14146335 tgactaccgtatacatgaggaacccccacctaacaccaaaattaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttg 14146236  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||||||||| |||||||||||    
T  14146235 agctgtttgcaccccctcagggacgcccctg 14146205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 41697215 - 41697345
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  41697215 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgatgcccatccttgagggaggcccagctcgtttg 41697314  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||||||||| |||||||||||    
T  41697315 agctgtttgcaccccctcagggacgcccctg 41697345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 16140090 - 16139960
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  16140090 tgactaccgtatacatgaggaatccccacctaacactaaaatcaatcatgaggaacccccacgcttgagacccatccttgagggaggcccaactcgtttg 16139991  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||    
T  16139990 agctgtttgcaccccctcaaggacgcccctg 16139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6771826 - 6771708
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  6771826 tgactaccgtatacacgaggaacctccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttaagggaggcccagctcgtttg 6771727  T
Q  100 agctgtttgcaccccctca 118  Q
    |||||||||||||||||||    
T  6771726 agctgtttgcaccccctca 6771708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 6888590 - 6888468
Alignment:
Q  10 tatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttgagctgtttg 108  Q
    |||||| |||||||| || | ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  6888590 tatacacgaggaacccccgcttaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccaactcgtttgagctgtttg 6888491  T
Q  109 caccccctcaaggacgcccctga 131  Q
    |||||||||| ||||||| ||||    
T  6888490 caccccctcagggacgcctctga 6888468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 27906949 - 27907014
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27906949 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 27907014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 44655604 - 44655538
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctga 131  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44655604 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctga 44655538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 50880614 - 50880568
Alignment:
Q  84 aggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  50880614 aggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 50880568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5316715 - 5316671
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  5316715 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 5316671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27906795 - 27906839
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  27906795 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 27906839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44655776 - 44655732
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  44655776 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 44655732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 5027982 - 5028029
Alignment:
Q  72 catccttgagggaggcccagctcgtttgagctgtttgcaccccctcaa 119  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5027982 catccttgggggaggcccagctcggttgagctgtttgcaccccctcaa 5028029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 10912094 - 10912148
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  10912094 ttgaggcccatccttggaggaggcccagctcgtttgagctgttcgcaccccctca 10912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50881465 - 50881424
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaat 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  50881465 tgactacagtatacatgaggaacctccacctaacaccaaaat 50881424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4971696 - 4971736
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  4971696 tgactaccgtatacatgaggaacccccacctaacaccaaaa 4971736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9173101 - 9173141
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  9173101 tgactaccgtatacatgaggaacccccacctaacaccaaaa 9173141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9181083 - 9181123
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  9181083 tgactaccgtatacatgaggaacccccacctaacaccaaaa 9181123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23185462 - 23185422
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  23185462 tgactaccgtatacatgaggaacccccacctaacaccaaaa 23185422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40501868 - 40501908
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  40501868 tgactaccgtatacatgaagaacctccacctaacaccaaaa 40501908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 13913730 - 13913776
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||    
T  13913730 tgagggaggcccagctctgttgagctgtttgcaccccctcagggacg 13913776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 23181777 - 23181723
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||| |||||| ||| ||| ||||||||||| ||||||||||||||||||||||    
T  23181777 ttgaggcccatcattgggggtggcccagctcggttgagctgtttgcaccccctca 23181723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 40502038 - 40502084
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||    
T  40502038 tgagggaggcccagctctgttgagctgtttgcaccccctcagggacg 40502084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27559672 - 27559635
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacacca 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  27559672 tgactaccgtatacatgaggaacccccacctaacacca 27559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1366956 - 1366996
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  1366956 tgactaccgtatacacgaggaacccccacctaacaccaaaa 1366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 1367125 - 1367165
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  1367125 tgagggaggcccagctctgttgagctgtttgcaccccctca 1367165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13913560 - 13913600
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  13913560 tgactaccgtatacatgagaaacccccacctaacaccaaaa 13913600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19955752 - 19955712
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  19955752 tgactaccgtatatatgaggaacccccacctaacaccaaaa 19955712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 44895519 - 44895479
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  44895519 tgagggaggcccagctctgttgagctgtttgcaccccctca 44895479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 44895683 - 44895647
Alignment:
Q  5 taccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44895683 taccgtatacatgaggaacccccacctaacaccaaaa 44895647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 4977929 - 4977967
Alignment:
Q  83 gaggcccagctcgtttgagctgtttgcaccccctcaagg 121  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  4977929 gaggcctagctcgattgagctgtttgcaccccctcaagg 4977967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 12037637 - 12037587
Alignment:
Q  82 ggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    |||||||||||||  | ||||||||||||||||||||| |||| |||||||    
T  12037637 ggaggcccagctcagtagagctgtttgcaccccctcaaagacggccctgat 12037587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 27559499 - 27559458
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaa 119  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  27559499 tgagggaggtccagctctgttgagctgtttgcaccccctcaa 27559458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5027584 - 5027544
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||| |||| |||||||||| ||||||||||||||||    
T  5027584 tgactaccatatagatgaggaacccccacctaacaccaaaa 5027544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 9173269 - 9173309
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  9173269 tgagggaggcccaactctgttgagctgtttgcaccccctca 9173309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17168991 - 17168951
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||| ||||||||||||||| | ||||||||||||||    
T  17168991 tgactaccatatacatgaggaacccctacctaacaccaaaa 17168951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 5e-54; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15480165 - 15480296
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  15480165 tgactaccgtatgcatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttg 15480264  T
Q  100 agctgtttgcaccccctcaaggacgcccctga 131  Q
    ||||||||||||||||||| ||||||||||||    
T  15480265 agctgtttgcaccccctcagggacgcccctga 15480296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19523223 - 19523092
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  19523223 tgactaccatatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttg 19523124  T
Q  100 agctgtttgcaccccctcaaggacgcccctga 131  Q
    ||||||||||||||||||| ||||||||||||    
T  19523123 agctgtttgcaccccctcagggacgcccctga 19523092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 36187955 - 36188082
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  36187955 tgactaccgtatacatgagaaacctccacctaacaccaaaattaatcatgaggaacccccactcttgaggcccatccttgagggaggcccaactcgtttg 36188054  T
Q  100 agctgtttgcaccccctcaaggacgccc 127  Q
    ||||||||||||||||||| ||||||||    
T  36188055 agctgtttgcaccccctcagggacgccc 36188082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 31881597 - 31881656
Alignment:
Q  71 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31881597 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 31881656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2274914 - 2274798
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaaccccactcttgagacccatccttgagggaggcccagctcgtttga 100  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||             ||||||  |||||||||||||||||||| ||| |||||    
T  2274914 tgactaccgtatacacgaggaacccccacctaacaccaaaatcaatcat-------------cttgaggtccatccttgagggaggcccaactcatttga 2274828  T
Q  101 gctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||| | |||||||||    
T  2274827 gctgtttgcaccccctcaggaacgcccctg 2274798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 34756615 - 34756682
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  34756615 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaggaacgcctctgat 34756682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 22987473 - 22987538
Alignment:
Q  70 cccatccttgagggaggcccagctcgtttgagctgtttgca-ccccctcaaggacgcccctgatta 134  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  22987473 cccatctttgagggaggcccagctcgtttgagctgtttgcacccccctcagggacgcccctgatta 22987538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 30853325 - 30853266
Alignment:
Q  71 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  30853325 ccatccttgaaggaggcccagctcgtttgagctgtttgcaccccctaagggacgcccctg 30853266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 16592845 - 16592911
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  16592845 ttgaggcccatccttaaaggaggtccagctcgtttgagctgtttgcaccccctcagggacgcccctg 16592911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 8433593 - 8433641
Alignment:
Q  82 ggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||| || |||||||||||||||||||||||||| |||||    
T  8433593 ggaggcccagctcattagagctgtttgcaccccctcaaggacggccctg 8433641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16198870 - 16198910
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  16198870 tgactaccgtatacatgaggaacccccacctaacaccaaaa 16198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16592150 - 16592194
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  16592150 tgactaccgtatatatgaggaacccccacctaacaccaaaatcaa 16592194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34756442 - 34756486
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  34756442 tgactaccgtatacatgaggaacccccacctaacaacaaaatcaa 34756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 31194767 - 31194833
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||| |||||||||||| ||||||||| ||||||||| |||||||||| ||||  | |||||||||    
T  31194767 ttgaggcccatccttgagagaggcccagttcgtttgagttgtttgcacctcctctggaacgcccctg 31194833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27079035 - 27078994
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaat 42  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  27079035 tgactactgtatacatgaggaacccccacctaacaccaaaat 27078994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30854353 - 30854312
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaat 42  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  30854353 tgactatcgtatacatgaggaacccccacctaacaccaaaat 30854312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9364315 - 9364275
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  9364315 tgactaccgtatacatgaggaacccccacctaacatcaaaa 9364275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 16199040 - 16199080
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  16199040 tgagggaggcccagctctgttgagctgtttgcaccccctca 16199080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28822418 - 28822458
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  28822418 tgactaccgtatacatgatgaacccccacctaacaccaaaa 28822458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38869439 - 38869479
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  38869439 tgactaccgtatacatgagaaacccccacctaacaccaaaa 38869479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 27923937 - 27923891
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    ||||||||| |||||||  |||||||||||||||||||||| |||||    
T  27923937 tgagggaggtccagctctgttgagctgtttgcaccccctcagggacg 27923891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 16799570 - 16799611
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaa 119  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  16799570 tgagggaggcctagctctattgagctgtttgcaccccctcaa 16799611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7670948 - 7670908
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||| | | ||||||||||||||||    
T  7670948 tgactaccgtatacatgaggtatccccacctaacaccaaaa 7670908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 16799407 - 16799443
Alignment:
Q  5 taccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||| |||| |||||||||||    
T  16799407 taccgtatacatgaggaacccccacataacaccaaaa 16799443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27924106 - 27924066
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||  || |||||||||||||    
T  27924106 tgactaccgtatacatgaggaacgcccgcctaacaccaaaa 27924066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 38869607 - 38869647
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||||||||||||||   ||||||||||||||||||||||    
T  38869607 tgagggaggcccagctttgttgagctgtttgcaccccctca 38869647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 41842855 - 41842807
Alignment:
Q  84 aggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    |||||||||||  | |||||||||| ||||||||||||||| |||||||    
T  41842855 aggcccagctcagtagagctgtttgtaccccctcaaggacggccctgat 41842807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 10955508 - 10955378
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  10955508 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccaactcgtttg 10955409  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||||||||    
T  10955408 agctatttgcaccccctcaaggacgcccctg 10955378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12596365 - 12596496
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  12596365 tgactaccgtatgcatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgagggccatccttgagggaggcccagctcgtttg 12596464  T
Q  100 agctgtttgcaccccctcaaggacgcccctga 131  Q
    ||||||||||||||||||| ||||||||||||    
T  12596465 agctgtttgcaccccctcagggacgcccctga 12596496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 18777019 - 18777086
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18777019 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacctcctcagggacgcccctgat 18777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 28749647 - 28749582
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccct 129  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  28749647 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagagacgcccct 28749582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8171617 - 8171661
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  8171617 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 8171661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29077244 - 29077200
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  29077244 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 29077200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20091359 - 20091399
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  20091359 tgactaccgtatacatgaggaacccccacctaacaccaaaa 20091399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23551149 - 23551189
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  23551149 tgactaccgtatacatgaggaacccccacctaacaccaaaa 23551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24525763 - 24525803
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  24525763 tgactaccgtatacatgaggaacccccacctaacaccaaaa 24525803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25010457 - 25010417
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  25010457 tgactaccgtatacatgaggaacccccacctaacaccaaaa 25010417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 48983924 - 48983962
Alignment:
Q  3 actaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  48983924 actaccgtatacatgaggaacccccacctaacaccaaaa 48983962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 29076998 - 29076942
Alignment:
Q  64 ttgagacccatccttgaggg--aggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||| ||||||||||||||  |||||| |||||||| |||||||||||||||||||    
T  29076998 ttgaggcccatccttgagggggaggccctgctcgtttaagctgtttgcaccccctca 29076942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18776844 - 18776884
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  18776844 tgactaccgtatacatgagaaacccccacctaacaccaaaa 18776884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 19691949 - 19691909
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  19691949 tgagggaggcccagctctgttgagctgtttgcaccccctca 19691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38414954 - 38414994
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  38414954 tgactactgtatacatgaggaacccccacctaacaccaaaa 38414994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 47985216 - 47985256
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  47985216 tgagggaggcccagctctgttgagctgtttgcaccccctca 47985256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 48984091 - 48984131
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  48984091 tgagggaggcccagctctgttgagctgtttgcaccccctca 48984131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 24525934 - 24525972
Alignment:
Q  80 agggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  24525934 agggaggcccagctctgttgagctgtttgcaccccctca 24525972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 20091528 - 20091565
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccc 115  Q
    |||||||||||||||||  |||||||||||||||||||    
T  20091528 tgagggaggcccagctctattgagctgtttgcaccccc 20091565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10329488 - 10329528
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||||||||| |||| |||| |||||||||||    
T  10329488 tgactaccgtatacatgagaaacccccacttaacaccaaaa 10329528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47985048 - 47985088
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||| ||||||||||||||||||| ||||||||||| ||||    
T  47985048 tgaccaccgtatacatgaggaacccccacctaacacaaaaa 47985088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 5e-51; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 24711078 - 24711208
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| |||||    
T  24711078 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagcttgtttg 24711177  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||||||||| |||||||||||    
T  24711178 agctgtttgcaccccctcagggacgcccctg 24711208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 30832603 - 30832732
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  30832603 tgactaccgtatgcatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcatttg 30832702  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||| |||||||||||||||||||    
T  30832703 agctgtttgca-cccctcaaggacgcccctg 30832732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 23070889 - 23070953
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccc 128  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23070889 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccc 23070953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 12083640 - 12083706
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12083640 ttgaggcccatccttgaggaaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 12083706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 13727650 - 13727715
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13727650 tgaggcccatctttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 13727715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 21280393 - 21280336
Alignment:
Q  70 cccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgccc 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21280393 cccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 21280336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 21479349 - 21479284
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  21479349 tgaggcccatccttgagggaggcccagctcgttttagctgtttgcaccccctcagggacgcccctg 21479284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 27314773 - 27314830
Alignment:
Q  73 atccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27314773 atccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 27314830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 19741230 - 19741289
Alignment:
Q  71 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  19741230 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgtccctg 19741289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 33773964 - 33773896
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgatta 134  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  33773964 tgaggcccatccttgagggaggcccagctcatttgag-tgtttgcaccccctcagggacgcccctgatta 33773896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 27579084 - 27579141
Alignment:
Q  73 atccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||    
T  27579084 atccttgagggaggcccagctcgtttgagctggttgcacccccttagggacgcccctg 27579141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13727478 - 13727522
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  13727478 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 13727522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19737771 - 19737815
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  19737771 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 19737815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21479521 - 21479477
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  21479521 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 21479477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33774144 - 33774100
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  33774144 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 33774100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 1156017 - 1156071
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||| ||||||||| |||||| || |||||||||||||||||||||||||||||    
T  1156017 ttgaggcccatccttaagggagacctagctcgtttgagctgtttgcaccccctca 1156071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21280572 - 21280528
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  21280572 tgactaccgtatacatgaggaactcccacctaacaccaaaatcaa 21280528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27788767 - 27788807
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27788767 tgactaccgtatacatgaggaacccccacctaacaccaaaa 27788807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28075810 - 28075770
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  28075810 tgactaccgtatacatgaggaacccccacctaacaccaaaa 28075770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 17353811 - 17353771
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  17353811 tgagggaggcccagctctgttgagctgtttgcaccccctca 17353771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 19987032 - 19986980
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccct 116  Q
    ||||| |||||  ||||||||||||||||||  ||||||||||||||||||||    
T  19987032 ttgaggcccataattgagggaggcccagctctgttgagctgtttgcaccccct 19986980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 27788936 - 27788976
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  27788936 tgagggaggcccagctctgttgagctgtttgcaccccctca 27788976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 235473 - 235528
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgatt 133  Q
    |||||||||||||||||  || ||||||||||||||||||| |||||  |||||||    
T  235473 tgagggaggcccagctctgttaagctgtttgcaccccctcagggacgggcctgatt 235528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 11574494 - 11574453
Alignment:
Q  83 gaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  11574494 gaggcccagctcagtagagctgtttgcaccccctcaaggacg 11574453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17353981 - 17353941
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||| ||||||||||| ||||| ||||||||||||||||    
T  17353981 tgactatcgtatacatgatgaacccccacctaacaccaaaa 17353941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 20711966 - 20712006
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  20711966 tgagggaggcccagctctgttgagctgtttgcacctcctca 20712006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34397884 - 34397844
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||| |||| ||||||||||||||||| |||||||||||    
T  34397884 tgactatcgtaaacatgaggaacctccacttaacaccaaaa 34397844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 21582798 - 21582667
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||    
T  21582798 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttaagggatgcccagctcgtttg 21582699  T
Q  100 agctgtttgcaccccctcaaggacgcccctga 131  Q
    |||||||||||||||||||  |||||||||||    
T  21582698 agctgtttgcaccccctcagagacgcccctga 21582667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 47467711 - 47467582
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  47467711 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggctcagctcgtttg 47467612  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||| ||||||| |||||||||||    
T  47467611 agctgtttgca-cccctcagggacgcccctg 47467582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 53149393 - 53149523
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||    
T  53149393 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttggtggaggcccagctcgtttg 53149492  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||||||| | |||||||||||    
T  53149493 agctgtttgcaccccctgagggacgcccctg 53149523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 42098828 - 42098698
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    |||||||||||||||||||||||| | || ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||    
T  42098828 tgactaccgtatacatgaggaacccctacttaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgtgggaggcccaactcgtttg 42098729  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||||||||| |||||||||||    
T  42098728 agctgtttgcaccccctcagggacgcccctg 42098698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 50258716 - 50258802
Alignment:
Q  47 catgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  50258716 catgaggaacccccactcttgaggcccatccttgagggaggcccagctcatttgagctgtttgcaccccctcagggacgcccctgat 50258802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 13795253 - 13795183
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgatta 134  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13795253 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacgccctcaaggacgcccctgatta 13795183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 36716276 - 36716345
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgatta 134  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36716276 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctgatta 36716345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 38681348 - 38681413
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38681348 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 38681413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 3954859 - 3954917
Alignment:
Q  71 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccct 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3954859 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccct 3954917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 27078819 - 27078884
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  27078819 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaggaacgcccctg 27078884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 27084616 - 27084681
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  27084616 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaggaacgcccctg 27084681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 54619454 - 54619507
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54619454 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 54619507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 36605911 - 36605862
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcacccc 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36605911 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 36605862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 29620618 - 29620665
Alignment:
Q  83 gaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  29620618 gaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 29620665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 1148360 - 1148408
Alignment:
Q  70 cccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  1148360 cccatccttgggggaggcccagctcgtttgagctgttcgcaccccctca 1148408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54619282 - 54619326
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  54619282 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 54619326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 18372092 - 18372032
Alignment:
Q  70 cccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctga 131  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||||||  |||||||||||    
T  18372092 cccatccttgagggagccccagctcgtttgaactgtttgca-cccctcagagacgcccctga 18372032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29620467 - 29620511
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  29620467 tgactaccgtatacatgaggaacccccacctaacaccacaatcaa 29620511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38681172 - 38681216
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  38681172 tgactaccgtatacatgaggaaaccccacctaacaccaaaatcaa 38681216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43207316 - 43207356
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  43207316 tgactaccgtatacatgaggaacccccacctaacaccaaaa 43207356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44708504 - 44708464
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  44708504 tgactaccgtatacatgaggaacccccacctaacaccaaaa 44708464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 3953980 - 3954019
Alignment:
Q  6 accgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  3953980 accgtatacatgaggaacccccacctaacaccaaaatcaa 3954019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 48156995 - 48156954
Alignment:
Q  77 ttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  48156995 ttgagggaggcccagctctgttgagctgtttgcaccccctca 48156954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18372506 - 18372462
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||    
T  18372506 tgactaccgtatacatgaggaatccccatctaacaccaaaatcaa 18372462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27078648 - 27078692
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||    
T  27078648 tgactaccgtatacatgagaaacccctacctaacaccaaaatcaa 27078692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27084445 - 27084489
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||    
T  27084445 tgactaccgtatacatgagaaacccctacctaacaccaaaatcaa 27084489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34290715 - 34290755
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  34290715 tgactaccgtatatatgaggaacccccacctaacaccaaaa 34290755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 43207488 - 43207528
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  43207488 tgagggaggcccagctctgttgagctgtttgcaccccctca 43207528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 44708334 - 44708294
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  44708334 tgagggaggcccagctctgttgagctgtttgcaccccctca 44708294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50939312 - 50939352
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  50939312 tgactaccgtatacatgaggaacccccgcctaacaccaaaa 50939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 53506963 - 53507003
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  53506963 tgactaccgtatacatgagaaacccccacctaacaccaaaa 53507003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 53507131 - 53507171
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  53507131 tgagggaggcccagctctgttgagctgtttgcaccccctca 53507171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 9878935 - 9878973
Alignment:
Q  80 agggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  9878935 agggaggcccagctctgttgagctgtttgcaccccctca 9878973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 34290874 - 34290928
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    ||||| ||||| | ||||||||||||| |||  ||||||||||||||||||||||    
T  34290874 ttgaggcccatgcctgagggaggcccaactctgttgagctgtttgcaccccctca 34290928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 50939482 - 50939528
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    |||||||||||||||||  |||||||||||||||| ||||| |||||    
T  50939482 tgagggaggcccagctctgttgagctgtttgcacctcctcagggacg 50939528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8073417 - 8073461
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaat 46  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||    
T  8073417 tgactaccgtatacatgaggaacc-ccacataacaccaaaagcaat 8073461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37168394 - 37168354
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||  ||||||||||| ||||    
T  37168394 tgactaccgtatacatgaggaactcccacctaacactaaaa 37168354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 7162807 - 7162677
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttg 99  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  7162807 tgactaccgtatatatgaggaacccctacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgtgggaggcccagctcgtttg 7162708  T
Q  100 agctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||||||||||||||||| |||||||||||    
T  7162707 agctgtttgcaccccctcagggacgcccctg 7162677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 3953025 - 3952911
Alignment:
Q  5 taccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttgagct 103  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  3953025 taccgtatgcatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagct 3952926  T
Q  104 gtttgcaccccctca 118  Q
    |||||||||||||||    
T  3952925 gtttgcaccccctca 3952911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 3155068 - 3155002
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctga 131  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3155068 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctga 3155002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 3399569 - 3399505
Alignment:
Q  70 cccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgatta 134  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  3399569 cccatccttgagggaggtccaactcgtttgagctgtttgcaccccctcaaggacgcccctgatta 3399505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 4505744 - 4505677
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4505744 tgaggcccatcattgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctgat 4505677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 6964857 - 6964794
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6964857 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccc 6964794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 12337689 - 12337755
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  12337689 ttgaggcccatccttgagggaggctcagctcgtttgagctgtttgcaccccctcagggacgcccctg 12337755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 34693212 - 34693147
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  34693212 tgaggcccatccttgagggaggcccaactcgtttgagctgtttgcaccccctcagggacgcccctg 34693147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 34715624 - 34715559
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  34715624 tgaggcccatccttgagggaggcccaactcgtttgagctgtttgcaccccctcagggacgcccctg 34715559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 41213928 - 41213996
Alignment:
Q  64 ttgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgat 132  Q
    ||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||||||    
T  41213928 ttgaggcccatcctcgagggagacccagctcgtttaagctgtttgcaccccctcaaggatgcccctgat 41213996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 40636022 - 40635963
Alignment:
Q  70 cccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccct 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  40636022 cccatccttgagggaggcccaactcgtttgagctgtttgcacccccttagggacgcccct 40635963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 8907330 - 8907391
Alignment:
Q  65 tgagacccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcc 126  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  8907330 tgagacccatctttgagggaggtccagcttgtttgagctgtttgcaccccctcagggacgcc 8907391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3155240 - 3155196
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  3155240 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 3155196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4505917 - 4505873
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  4505917 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 4505873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6965030 - 6964986
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  6965030 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 6964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12337527 - 12337571
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  12337527 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 12337571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8907158 - 8907202
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||    
T  8907158 tgactaccgtatacatgagaaacccccacctaacaccaaaatcaa 8907202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29939941 - 29939981
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  29939941 tgactaccgtatacatgaggaaccaccacctaacaccaaaa 29939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10762644 - 10762683
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  10762644 tgactaccgtatacatgaggaacccccacctaacaccaaa 10762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 27506989 - 27507035
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacg 124  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||    
T  27506989 tgagggaggcccagctctgttgagctgtttgcaccccctcagggacg 27507035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 5952949 - 5952993
Alignment:
Q  83 gaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccc 128  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||    
T  5952949 gaggcccagctcgtttgagctgtttgca-cccctcagggacgcccc 5952993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 9045884 - 9045844
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  9045884 tgagggaggcccagctctgttgagctgtttgcaccccctca 9045844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9046052 - 9046012
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  9046052 tgactaccgtatacatgaggaacccccacctaacacaaaaa 9046012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 26715983 - 26715943
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  26715983 tgagggaggcccagctctgttgagctgtttgcaccccctca 26715943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26716151 - 26716111
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  26716151 tgactaccgtatacatgaggaacccccacctaacacaaaaa 26716111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 24410288 - 24410250
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccct 116  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  24410288 tgagggaggcccagctctgttgagctgtttgcaccccct 24410250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24410460 - 24410419
Alignment:
Q  1 tgactaccgtatacatgaggaa-cctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  24410460 tgactaccgtatacatgaggaaccccccacctaacaccaaaa 24410419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27506819 - 27506859
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  27506819 tgactactgtatacatgaggaactcccacctaacaccaaaa 27506859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 181943 - 181851
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagc 92  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  181943 tgactaccgtatacatgaggaacccccatctaacaccaaaatcaatcatgaggaacccccactcttgagacccatccttgagggaggcccagc 181851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 181480 - 181435
Alignment:
Q  85 ggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  181480 ggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 181435  T

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Target: scaffold0070 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 1070 - 1011
Alignment:
Q  71 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctg 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1070 ccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctg 1011  T

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Target: scaffold0070; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1367 - 1323
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  1367 tgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 1323  T

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Target: scaffold0039 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 106562 - 106522
Alignment:
Q  1 tgactaccgtatacatgaggaacctccacctaacaccaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  106562 tgactaccgtatacatgaggaacccccacctaacaccaaaa 106522  T

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Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 106431 - 106391
Alignment:
Q  78 tgagggaggcccagctcgtttgagctgtttgcaccccctca 118  Q
    |||||||||||||||||  ||||||||||||||||| ||||    
T  106431 tgagggaggcccagctctgttgagctgtttgcaccctctca 106391  T

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