View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_low_48 (Length: 341)
Name: NF14353_low_48
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_48 |
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Alignment Details
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 12 - 327
Target Start/End: Original strand, 29336825 - 29337139
Alignment:
| Q |
12 |
gaatattgcatgcacatacatgttcagtttcttcattgcaaattctaggtggaaaggaaatctcacatgtgttggtttagagagcaaaatatagtttggt |
111 |
Q |
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| T |
29336825 |
gaatattgcatgcacatacatgttcagtttcttcattgcaaattctaggtggaaaggaaatctcacatgtgttggtttagagagcaaaatatagtttggt |
29336924 |
T |
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| Q |
112 |
ggtggtgcaaaactagagcatgaatgagatgatgaaaatctagtgattataagttctaaattacctagaaaccaagaaagaacacaatcagaagtttaga |
211 |
Q |
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| T |
29336925 |
gcgggtgcaaaactagagcatgaatgagatgatgaaaatctagtgattataaagagtg--ttacctagaaaccaagaaagaacacagtcagaagtttaga |
29337022 |
T |
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| Q |
212 |
acaggttgaaaataaagagtgttacataccctctcttaag-ttcaagttcaaactgatggttgcttgcttctgagatcaactataaactgctttggaaat |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29337023 |
acaggttgaaaataaagagtgttacataccctctcttaagtttcaagttcaaactgatggttgcttgcttctgagatcaactataaactgctttggaaat |
29337122 |
T |
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| Q |
311 |
tggagacatgtttttcc |
327 |
Q |
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| T |
29337123 |
tggagacatgtttttcc |
29337139 |
T |
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