View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14353_low_51 (Length: 328)
Name: NF14353_low_51
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_51 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 29273231 - 29273541
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29273231 |
tagattgctcttgcaagggttgatttacccaagccaccaatcccataaattccaaccatatggatcccatcatcagatccattatcaagaagcgatttga |
29273330 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29273331 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
29273430 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtcaaataatacaagttagtaatagtatgtaacaactaatacttatttagaaatgtaaataaaaacggttttatccatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29273431 |
cttgtattcatatctattcatgtcaaataatacaagttagtaatagtatgtaacaactaatacttatttagaaacgtaaataaaaacggttttatccatt |
29273530 |
T |
|
| Q |
301 |
tatgatttaag |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
29273531 |
tatgatttaag |
29273541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 267733 - 267989
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| | |
|
|
| T |
267733 |
tagattgctcttgcaagggttgatttacccaagcctccaatcccataaattccaaccatatggaccccatcatcagatccattatcaagaagcaatttca |
267832 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
267833 |
cttgttgtacttgagaccataatccaacagggtaattggcaacatgtaagggctcacgactgatcttgttggagatgtatttgactatctctccaataaa |
267932 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtcaaataatacaagttagtaatagtatgtaacaac |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
267933 |
cttgtattcatatctattcatgtcaaataatgcaagttagtaatagtatgtaacaac |
267989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 28127079 - 28127308
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| |||||| || ||||||| ||| ||||| |||| | |||||||| |||| ||||| |||| | | || |||||||||||| |
|
|
| T |
28127079 |
tgcaagtgttgatttacccaagcctccaataccataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaaattcacttgttgtact |
28127178 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccg-ataaacttgtattca |
210 |
Q |
| |
|
|| ||||||||||||||| |||||||||||||||||| || || ||||| ||| ||| |||| ||||| ||||| || | ||||||||||||||| |
|
|
| T |
28127179 |
tggtcctgtaatccaacaggatatttggcaacatgtaagaaaacacgattgatcctgtcggatatgtctttgattatct-tctgaataaacttgtattca |
28127277 |
T |
|
| Q |
211 |
tatctattcatgtcaaataatacaagttagt |
241 |
Q |
| |
|
|||||||| || || ||||| | |||||||| |
|
|
| T |
28127278 |
tatctattaatctccaataagataagttagt |
28127308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 28163779 - 28163916
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| |||||| | |||||| ||| ||||| |||| | |||||||| |||| ||||| |||| | |||| |||||||||||| |
|
|
| T |
28163779 |
tgcaagtgttgatttacccaagcctccagtatcataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaatttcacttgttgtact |
28163878 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaa |
149 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||||||||| |
|
|
| T |
28163879 |
tgagattgtaatccaacaggatattttgcaacatgtaa |
28163916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 268056 - 268115
Alignment:
| Q |
252 |
aacaactaatacttatttagaaatgtaaataaaaacggttttatccatttatgatttaag |
311 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||| |
|
|
| T |
268056 |
aacaactaatacttatttagaaacgtaaataaaaaaggttttagccatttatggtttaag |
268115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 27697979 - 27698220
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||| |||||||| |||| |||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
27697979 |
tagattgctcttgcaagtgttgattttcccaagcctccaatcccaaaaattccaaccatatggaccccatcatcagatccattatcaagaattgatttca |
27698078 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
27698079 |
ctctttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaa |
27698178 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|||||||||||||||| || |||| | ||| | ||||||||| |
|
|
| T |
27698179 |
cttgtattcatatctactcgtgtcgagtaagaaaagttagta |
27698220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 26624060 - 26623837
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||| |||||||| |||| |||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
26624060 |
tagattgctcttgcaagtgttgatttgcccaagcctccaatcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatttca |
26623961 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| | | ||||| |
|
|
| T |
26623960 |
cttgttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaataaa |
26623861 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtc |
224 |
Q |
| |
|
| ||||||||||| |||||||| |
|
|
| T |
26623860 |
atcatattcatatctgttcatgtc |
26623837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 26730037 - 26729814
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||| |||||||| |||| |||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
26730037 |
tagattgctcttgcaagtgttgatttgcccaagcctccaatcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatttca |
26729938 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| | | ||||| |
|
|
| T |
26729937 |
cttgttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaataaa |
26729838 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtc |
224 |
Q |
| |
|
| ||||||||||| |||||||| |
|
|
| T |
26729837 |
atcatattcatatctgttcatgtc |
26729814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 27427005 - 27427246
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||| | |||||||| |||||| | |
|
|
| T |
27427005 |
tagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttca |
27427104 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
27427105 |
cttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaataag |
27427204 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
27427205 |
ctcgtattcatatctattcatgtccaataatataagttagta |
27427246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 26803235 - 26802994
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||| | ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||| | |||||||| |||||| | |
|
|
| T |
26803235 |
tagattgctcttgcaagtgctgatttacccaagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttca |
26803136 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
||| ||||||| |||| || |||||||||||||| || ||||||||||||||| || |||||||||||||||||||||||||||||||||| || || |
|
|
| T |
26803135 |
cttcttgtactcgagagtgcaatccaacagggtaattagcaacatgtaagggctgacgattgatcttgttggagatgtatttgactatctctccaatcaa |
26803036 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|||||||||||||||||||||||| || || | ||||||||| |
|
|
| T |
26803035 |
cttgtattcatatctattcatgtccaacaagataagttagta |
26802994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 27592426 - 27592654
Alignment:
| Q |
13 |
gcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtactt |
112 |
Q |
| |
|
||||| |||||||| |||| |||||| ||||||||||||||||||||||||| ||||| ||||||||| | |||||||| |||||| |||||||||||| |
|
|
| T |
27592426 |
gcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatcagatccttcatcaagaagcgatttcacttgttgtactc |
27592525 |
T |
|
| Q |
113 |
gagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcata |
212 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||| ||| |||| |||||||||||| |
|
|
| T |
27592526 |
gagactgcaatccaacagggtaagtggcaacatttaagggctgtcgactgatcttgttggagatgtatttgactatctttccaataagcttgtattcata |
27592625 |
T |
|
| Q |
213 |
tctattcatgtcaaataatacaagttagt |
241 |
Q |
| |
|
||||||||||| ||||| | |||||||| |
|
|
| T |
27592626 |
tctattcatgtgcaataagataagttagt |
27592654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 27679728 - 27679499
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| |||||||| |||| ||||| || |||||||||||||||||||||| ||||||||| ||||| | |||||||| |||||| |||||||||||| |
|
|
| T |
27679728 |
tgcaagtgttgatttccccaaacctccaatgccataaattccaaccatatggaccccatcatcggatccctcatcaagaagcgatttcacttgttgtact |
27679629 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |
|
|
| T |
27679628 |
cgagactgcaatccaacagggtaagtggcaacatgtaagggctgtcgactgatcttgttggagatgtatttgactatctttccaataagcttgtattcat |
27679529 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttagt |
241 |
Q |
| |
|
|||||||||||| ||||| | |||||||| |
|
|
| T |
27679528 |
atctattcatgtgcaataagataagttagt |
27679499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 27705800 - 27706037
Alignment:
| Q |
4 |
attgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgactt |
103 |
Q |
| |
|
||||||| |||||| ||||||||||||| |||||| || ||| |||||||||||||||||| ||||||||||| ||| | |||||||| ||||| |||| |
|
|
| T |
27705800 |
attgctcttgcaagtgttgatttacccaagcctccaatgccaaaaattccaaccatatggaccccatcatcaggtccctcatcaagaagtgatttcactt |
27705899 |
T |
|
| Q |
104 |
gttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaactt |
203 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||| |
|
|
| T |
27705900 |
gttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggatgtcgactgatcttgttggagatgtatttgactatctttccaataagctt |
27705999 |
T |
|
| Q |
204 |
gtattcatatctattcatgtcaaataatacaagttagt |
241 |
Q |
| |
|
|||||||||||||||||||| ||||| | |||||||| |
|
|
| T |
27706000 |
gtattcatatctattcatgtgcaataagataagttagt |
27706037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 28787014 - 28786786
Alignment:
| Q |
14 |
caagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtacttg |
113 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||||| ||| ||||| ||| |||||||||||||| | |||||||| |||||| |||||||||||| | |
|
|
| T |
28787014 |
caagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgatttcacttgttgtactcg |
28786915 |
T |
|
| Q |
114 |
agactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcatat |
213 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
28786914 |
agactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatctccaataaacttgtattcatat |
28786815 |
T |
|
| Q |
214 |
ctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|||||||||||| |||| | ||||||||| |
|
|
| T |
28786814 |
ctattcatgtcatataagataagttagta |
28786786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 27677025 - 27677253
Alignment:
| Q |
13 |
gcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtactt |
112 |
Q |
| |
|
||||| |||||||| |||| |||||| ||||||||||||||||||||||||| ||||| ||||||||| | |||||||| |||||| | |||||||||| |
|
|
| T |
27677025 |
gcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatcagatccttcatcaagaagcgatttcatttgttgtactc |
27677124 |
T |
|
| Q |
113 |
gagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcata |
212 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |||| |||||||||||| |
|
|
| T |
27677125 |
gagactgcaatccaacagggtaagtggcaacatgtaagggttgttgactgatcttgttggagatgtatttgactatctttccaataagcttgtattcata |
27677224 |
T |
|
| Q |
213 |
tctattcatgtcaaataatacaagttagt |
241 |
Q |
| |
|
||||||||||| ||||| | |||||||| |
|
|
| T |
27677225 |
tctattcatgtgcaataagataagttagt |
27677253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 28793135 - 28792907
Alignment:
| Q |
14 |
caagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtacttg |
113 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||||| ||| ||||| ||| |||||||||||||| | |||||||| |||||| |||||||||||| | |
|
|
| T |
28793135 |
caagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgatttcacttgttgtactcg |
28793036 |
T |
|
| Q |
114 |
agactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcatat |
213 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
28793035 |
agactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatctccaataaacttgtattcatat |
28792936 |
T |
|
| Q |
214 |
ctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
||||| ||||| |||| | ||||||||| |
|
|
| T |
28792935 |
ctattaatgtccgataagataagttagta |
28792907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 27610524 - 27610754
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| ||||| | ||||||| ||| ||||| |||| ||||||||||||| | |||||||| |||||| |||| ||||||| |
|
|
| T |
27610524 |
tgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttcttgtact |
27610623 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
27610624 |
tgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactgatcttgttggagatgtatttgactatctctccagtaaactcgtattcat |
27610723 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
||||||||||| | ||||| | ||||||||| |
|
|
| T |
27610724 |
atctattcatgcccaataagataagttagta |
27610754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 27717903 - 27718133
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| ||||| | ||||||| ||| ||||| |||| ||||||||||||| | |||||||| |||||| |||||||||||| |
|
|
| T |
27717903 |
tgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttgttgtact |
27718002 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
27718003 |
cgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgactatctctccaataaactcgtattcat |
27718102 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
||||||||||||| | ||| | ||||||||| |
|
|
| T |
27718103 |
atctattcatgtccagtaagataagttagta |
27718133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 28781877 - 28781649
Alignment:
| Q |
14 |
caagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtacttg |
113 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||||| ||| ||||| || |||| |||| |||| | | |||||| |||||| |||||||||||| | |
|
|
| T |
28781877 |
caagtgttgatttacccaagcctccagtaccataaagtcctaccatcctgactccattatcatatccttcaccaagaagcgatttcacttgttgtactcg |
28781778 |
T |
|
| Q |
114 |
agactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcatat |
213 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
28781777 |
ggactgtaatccaacagggtaattggcaacatgtaagtgctgacgactgatcttgttggagatgtatttgactatatcgccaataaacttgtattcatat |
28781678 |
T |
|
| Q |
214 |
ctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|||||||||||| |||| | ||||||||| |
|
|
| T |
28781677 |
ctattcatgtcatataagataagttagta |
28781649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 31285348 - 31285126
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||| ||||||||||||| |||||| |||||||||| ||| ||||| || | ||| | || || | | |||||||||| | |||| | |
|
|
| T |
31285348 |
tagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtgtacccctttattagtttccttatcaagaagcaatttca |
31285249 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
||||||||| | || ||| |||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
31285248 |
cttgttgtattcgaaacttaaatccaacagggtaattggcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaa |
31285149 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgt |
223 |
Q |
| |
|
| ||||||||||| ||||||| |
|
|
| T |
31285148 |
atcatattcatatctgttcatgt |
31285126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 27604108 - 27604338
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| ||||| | ||||||| ||| ||||| |||| ||||||||||||| | |||||||| ||||| |||||||||||| |
|
|
| T |
27604108 |
tgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagagatttcacttgttgtact |
27604207 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
||||||| ||||||| ||| || |||||||||||||||||| || ||||||||||||||||| | ||| ||||||| ||| |||| || |||||||| |
|
|
| T |
27604208 |
cgagactgcaatccaataggataattggcaacatgtaagggctgacgactgatcttgttggagatttctttcactatctttccaataagctcgtattcat |
27604307 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
||||||||||||| ||||| | ||||||||| |
|
|
| T |
27604308 |
atctattcatgtccaataagataagttagta |
27604338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 26647256 - 26647045
Alignment:
| Q |
13 |
gcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtactt |
112 |
Q |
| |
|
||||| ||||||||||||| ||||| | ||||||| ||| |||||||||| ||| ||||||||| | |||||||||| | |||| ||||||| || | |
|
|
| T |
26647256 |
gcaagtgttgatttacccaaacctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatc |
26647157 |
T |
|
| Q |
113 |
gagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcata |
212 |
Q |
| |
|
| |||| ||||||||||||||||||||| |||||||| || || |||||||||||||||||| || |||||||| || ||||||||||||||||| |
|
|
| T |
26647156 |
gggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcata |
26647057 |
T |
|
| Q |
213 |
tctattcatgtc |
224 |
Q |
| |
|
|||||||||||| |
|
|
| T |
26647056 |
tctattcatgtc |
26647045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 26753224 - 26753013
Alignment:
| Q |
13 |
gcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtactt |
112 |
Q |
| |
|
||||| ||||||||||||| ||||| | ||||||| ||| |||||||||| ||| ||||||||| | |||||||||| | |||| ||||||| || | |
|
|
| T |
26753224 |
gcaagtgttgatttacccaaacctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatc |
26753125 |
T |
|
| Q |
113 |
gagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcata |
212 |
Q |
| |
|
| |||| ||||||||||||||||||||| |||||||| || || |||||||||||||||||| || |||||||| || ||||||||||||||||| |
|
|
| T |
26753124 |
gggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcata |
26753025 |
T |
|
| Q |
213 |
tctattcatgtc |
224 |
Q |
| |
|
|||||||||||| |
|
|
| T |
26753024 |
tctattcatgtc |
26753013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 26656742 - 26656532
Alignment:
| Q |
13 |
gcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtactt |
112 |
Q |
| |
|
||||| ||||||||||||| |||||| | ||||||| ||| ||||| | | | |||| | |||||| |||||||||| | |||| |||||||||||| |
|
|
| T |
26656742 |
gcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactc |
26656643 |
T |
|
| Q |
113 |
gagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcata |
212 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| || || ||||||||| |||||||| ||||||||| | | ||||||||||||||||| |
|
|
| T |
26656642 |
gagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaataaacttgtattcata |
26656543 |
T |
|
| Q |
213 |
tctattcatgt |
223 |
Q |
| |
|
||||||||||| |
|
|
| T |
26656542 |
tctattcatgt |
26656532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 26762713 - 26762503
Alignment:
| Q |
13 |
gcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtactt |
112 |
Q |
| |
|
||||| ||||||||||||| |||||| | ||||||| ||| ||||| | | | |||| | |||||| |||||||||| | |||| |||||||||||| |
|
|
| T |
26762713 |
gcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactc |
26762614 |
T |
|
| Q |
113 |
gagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcata |
212 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| || || ||||||||| |||||||| ||||||||| | | ||||||||||||||||| |
|
|
| T |
26762613 |
gagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaataaacttgtattcata |
26762514 |
T |
|
| Q |
213 |
tctattcatgt |
223 |
Q |
| |
|
||||||||||| |
|
|
| T |
26762513 |
tctattcatgt |
26762503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 27530705 - 27530935
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||| | |||||| | ||||||| ||| ||||| |||| | ||||||||||| | ||||||| | ||| || ||||||||| |
|
|
| T |
27530705 |
tgcaagtgttgatttacctatgcctccagtaccataaagtcctaccatgtggacctcatcatcagatttttcatcaagatgccctttcacatgttgtact |
27530804 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||| ||||||| | || || ||| ||||||| |||| || |||||||| ||| ||||||| |||||||| |
|
|
| T |
27530805 |
cgggactgtaatccaacaggatatttggcaacatctaagggctcacgactaatcctgttggaaatgtcttcgactatctttccaataaactcgtattcat |
27530904 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
||||||||||||| ||||| | ||||||||| |
|
|
| T |
27530905 |
atctattcatgtccaataagataagttagta |
27530935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 239
Target Start/End: Complemental strand, 26884848 - 26884621
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| |||||| | ||||||||||| ||||| || | ||| || | |||| | |||||||||| | |||| | |||||||||| |
|
|
| T |
26884848 |
tgcaagtgttgatttacccaagcctccagtaccataaattcctaccatgtgtaccccttcgttagattccttatcaagaagcaattttaattgttgtact |
26884749 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||| || || |||| |||| |||||| | || |||||||| |||||||||| |||||| | |
|
|
| T |
26884748 |
cggtactgtaatccaacagggtatttggctacatgtaaaacaacacgattgattttgtcggagatatcttcgactatcttcccgataaactcgtattcgt |
26884649 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagtta |
239 |
Q |
| |
|
||||||||||||| ||||| | |||||| |
|
|
| T |
26884648 |
atctattcatgtccaataagataagtta |
26884621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 26824597 - 26824460
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||| | ||||| || || |||| ||| |||||||||| | ||||||||||| | |||||||||| ||||| |||||||||||| |
|
|
| T |
26824597 |
tgcaagtgttgatttacctaaacctccaataccgtaaagtcctaccatatggaccacatcatcagattcgttatcaagaagagatttcacttgttgtact |
26824498 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaa |
149 |
Q |
| |
|
| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
26824497 |
cgggactgtaatccaaccgggtatttggcaacatgtaa |
26824460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 25539321 - 25539093
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| |||||| | ||||||| ||| ||||| ||| | |||| ||||| || ||||||| | |||| ||||||| || | |
|
|
| T |
25539321 |
tgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccaagtcaagaagcaatttcacttgttctatt |
25539222 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
| |||||||||||||||||||||||||| |||| ||| || | |||| ||||||||||||| || |||||||| | |||||||||||||||| |
|
|
| T |
25539221 |
ggggactgtaatccaacagggtatttggccacatataaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcat |
25539122 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttag |
240 |
Q |
| |
|
||||||||||||| ||||| | ||||||| |
|
|
| T |
25539121 |
atctattcatgtccaataagataagttag |
25539093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 25580500 - 25580272
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| |||||| | ||||||| ||| ||||| |||| | |||| ||||| || | ||||||| | |||| ||||||| || | |
|
|
| T |
25580500 |
tgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgtggaccacatcctcagagcccatgtcaagaagcaatttcacttgttctatt |
25580401 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
| |||||||||||||||||||||||||| || | ||| || | |||| ||||||||||||| || |||||||| | |||||||||||||||| |
|
|
| T |
25580400 |
cgggactgtaatccaacagggtatttggctacgtttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcat |
25580301 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttag |
240 |
Q |
| |
|
|||||||| |||| ||||| | ||||||| |
|
|
| T |
25580300 |
atctattcgtgtccaataagataagttag |
25580272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 27337499 - 27337635
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| |||||||| |||| ||||| | ||||||| ||| ||||| | || ||| ||||||||| | | |||||||| | |||| |||||||||||| |
|
|
| T |
27337499 |
tgcaagtgttgattttcccaagcctctagtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttgttgtact |
27337598 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgta |
148 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
27337599 |
cgggactgtaatccaacagggtatttggcaacgtgta |
27337635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 27398239 - 27398375
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| |||||||| |||| ||||| | ||||||| ||| ||||| | || ||| ||||||||| | | |||||||| | |||| |||||||||||| |
|
|
| T |
27398239 |
tgcaagtgttgattttcccaagcctctagtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttgttgtact |
27398338 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgta |
148 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
27398339 |
cgggactgtaatccaacagggtatttggcaacgtgta |
27398375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 12 - 230
Target Start/End: Complemental strand, 26143646 - 26143428
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| |||||| | ||| ||| ||| ||||| ||| | |||| ||||| || | ||||||| | |||| |||| || || | |
|
|
| T |
26143646 |
tgcaagtgttgatttacccatgcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttcttctatt |
26143547 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
| |||||||||||||||||||||||||| |||| ||| || | |||| ||||||||||||| || |||||||| | |||||||||||||||| |
|
|
| T |
26143546 |
cgggactgtaatccaacagggtatttggctacatttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcat |
26143447 |
T |
|
| Q |
212 |
atctattcatgtcaaataa |
230 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
26143446 |
atctattcatgtccaataa |
26143428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 25492723 - 25492860
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||| | |||||| | ||||||| ||| ||||| |||| | |||| |||||| | | ||| |||| | |||| || ||||||||| |
|
|
| T |
25492723 |
tgcaagtgttgatttacctaagcctccagtaccataaagtcctaccatgtggaactcatcctcagatacctcatctagaagcaatttcacgtgttgtact |
25492822 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaa |
149 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||| |
|
|
| T |
25492823 |
cgggattgtaatccaacagggtatttggcaacatgtaa |
25492860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 25483837 - 25483609
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| |||||| | ||| ||| ||| ||||| ||| | |||| ||||| || | ||||||| | |||| ||||||| || | |
|
|
| T |
25483837 |
tgcaagtgttgatttacccatgcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctatt |
25483738 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
| |||||||||||||||||||||||||| || | ||| | | |||| |||||||||||||||| |||||||| | |||||||||| ||||| |
|
|
| T |
25483737 |
cgggactgtaatccaacagggtatttggctacgtttaaaaaatcatgattgatattgttggagatgtattggactatcttctcaataaacttgtgttcat |
25483638 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttag |
240 |
Q |
| |
|
||||||||||||| ||||| | ||||||| |
|
|
| T |
25483637 |
atctattcatgtccaataagataagttag |
25483609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 26862358 - 26862230
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| |||||||| |||| |||||| | ||||||| ||| ||||| || | ||| ||||||||| | ||||||||| | |||| ||||||| |||| |
|
|
| T |
26862358 |
tgcaagtgttgatttccccatgcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctact |
26862259 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggc |
140 |
Q |
| |
|
| |||| ||||||||||||||||||||| |
|
|
| T |
26862258 |
cgggactttaatccaacagggtatttggc |
26862230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 230
Target Start/End: Complemental strand, 26056700 - 26056482
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| ||||||| | ||| ||||||| ||||| ||| | ||| ||||| || | ||||||| | |||| ||||||| || | |
|
|
| T |
26056700 |
tgcaagtgttgatttacccatgcctccggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgttctatt |
26056601 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
| ||||| |||||||||||||||||||| || | ||| || | ||||||||||||||||| || |||||||| | ||||||||| ||||| |
|
|
| T |
26056600 |
cgggactgcaatccaacagggtatttggctacgtttaaaaaaacatgattgatcttgttggagatgccttcgactatcttctcaataaacttgcattcag |
26056501 |
T |
|
| Q |
212 |
atctattcatgtcaaataa |
230 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
26056500 |
atctattcatgtccaataa |
26056482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 230
Target Start/End: Complemental strand, 26076670 - 26076452
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| ||||||| | ||| ||||||| ||||| ||| | ||| ||||| || | ||||||| | |||| ||||||| || | |
|
|
| T |
26076670 |
tgcaagtgttgatttacccatgcctccggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgttctatt |
26076571 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
| ||||| |||||||||||||||||||| || | ||| || | ||||||||||||||||| || |||||||| | ||||||||| ||||| |
|
|
| T |
26076570 |
cgggactgcaatccaacagggtatttggctacgtttaaaaaaacatgattgatcttgttggagatgccttcgactatcttctcaataaacttgcattcag |
26076471 |
T |
|
| Q |
212 |
atctattcatgtcaaataa |
230 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
26076470 |
atctattcatgtccaataa |
26076452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 25511567 - 25511498
Alignment:
| Q |
161 |
tgatcttgttggagatgtatttgactatctctccgataaacttgtattcatatctattcatgtcaaataa |
230 |
Q |
| |
|
|||||||||||||||||| || |||||||| | ||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
25511567 |
tgatcttgttggagatgtcttcgactatcttctcaataaacttgtattcagatctattcatgtccaataa |
25511498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 27215230 - 27215093
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| |||||| |||| || ||| ||||| |||| | | || | |||||| || ||||||| | |||| |||||||||| | |
|
|
| T |
27215230 |
tgcaagtgttgatttacccatgcctccagctccatgaagtcctaccatgtggacctcttccttagatcccttgtcaagaagcaattttacttgttgtatt |
27215131 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaa |
149 |
Q |
| |
|
|| | |||||||||||||||| ||||||||||||||| |
|
|
| T |
27215130 |
tgggtatgtaatccaacagggtgtttggcaacatgtaa |
27215093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 60358 - 60117
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||| | |||||||| |||||| | |
|
|
| T |
60358 |
tagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttca |
60259 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
60258 |
cttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaataag |
60159 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
60158 |
ctcgtattcatatctattcatgtccaataatataagttagta |
60117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 134; Significance: 1e-69; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 18074550 - 18074309
Alignment:
| Q |
1 |
tagattgctcgtgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttga |
100 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||| | |||||||| |||||| | |
|
|
| T |
18074550 |
tagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttca |
18074451 |
T |
|
| Q |
101 |
cttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaa |
200 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
18074450 |
cttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaataag |
18074351 |
T |
|
| Q |
201 |
cttgtattcatatctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
18074350 |
ctcgtattcatatctattcatgtccaataatataagttagta |
18074309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 18698801 - 18699018
Alignment:
| Q |
13 |
gcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtactt |
112 |
Q |
| |
|
||||| ||||||||||||| |||||| || ||||||| ||| | ||| ||| |||||||||||||| |||||||||| || ||| |||||||||||| |
|
|
| T |
18698801 |
gcaagtgttgatttacccatgcctccaatgccataaagtcctaacatgcggactccatcatcagatcctttatcaagaagcgctttcacttgttgtactc |
18698900 |
T |
|
| Q |
113 |
gagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcata |
212 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||| |||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
18698901 |
gagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagacgtatttgactatatctccaataaacttgtattcata |
18699000 |
T |
|
| Q |
213 |
tctattcatgtcaaataa |
230 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
18699001 |
tctattcatgtccaataa |
18699018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 230
Target Start/End: Original strand, 18678960 - 18679178
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||| ||||||||| |||||| || ||||||| ||| ||||| ||| ||||||| ||||| | |||||||| |||||| |||||||||||| |
|
|
| T |
18678960 |
tgcaagtgttaatttacccatgcctccaatgccataaagtcctaccatgcggactccatcataagatcattcatcaagaagcgatttcacttgttgtact |
18679059 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||| || ||||||||||| |||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
18679060 |
cgagactgcaatccaacagggtaattggcaacatgtaagggctgccgactgatcttgttagagacgtatttgactatctctccaataaacttgtattcat |
18679159 |
T |
|
| Q |
212 |
atctattcatgtcaaataa |
230 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
18679160 |
atctattcatgtccaataa |
18679178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 230
Target Start/End: Original strand, 18654877 - 18655095
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| |||||||| |||| |||||| || ||||||| ||| | ||| ||| ||| |||||||||| |||||||||| |||||| |||||||||||| |
|
|
| T |
18654877 |
tgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccatcagatcctttatcaagaagcgatttcacttgttgtact |
18654976 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
||||||| || ||||||||||| ||||| ||||||||||| || |||||||||||||||| ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
18654977 |
cgagactgcaacccaacagggtaactggcagcatgtaagggctgacgactgatcttgttggagacatatttgactatctttccaataaacttgtattcat |
18655076 |
T |
|
| Q |
212 |
atctattcatgtcaaataa |
230 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
18655077 |
atctattcatgtccaataa |
18655095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 18730905 - 18731122
Alignment:
| Q |
13 |
gcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtactt |
112 |
Q |
| |
|
||||| |||||||| |||| |||||| || ||||||| ||| | ||| ||| ||| ||| |||||| |||||||||| |||||| |||||||||||| |
|
|
| T |
18730905 |
gcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccataagatcctttatcaagaagcgatttcacttgttgtactc |
18731004 |
T |
|
| Q |
113 |
gagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcata |
212 |
Q |
| |
|
||||||| || ||||||||||| ||||||||||||||||| || |||||||||||||||| ||||||||||||| | | ||||||||||||||||| |
|
|
| T |
18731005 |
gagactgcaacccaacagggtaaatggcaacatgtaagggctgacgactgatcttgttggagacatatttgactatcttttcaataaacttgtattcata |
18731104 |
T |
|
| Q |
213 |
tctattcatgtcaaataa |
230 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
18731105 |
tctattcatgtccaataa |
18731122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 230
Target Start/End: Original strand, 18723485 - 18723703
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| |||||||| |||| |||||| || ||||||| ||| | ||| ||| ||| ||| |||||| |||||||||| |||||| |||||||||||| |
|
|
| T |
18723485 |
tgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccattagatcctttatcaagaagcgatttcacttgttgtact |
18723584 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
||||||| || ||||||||||| ||||||||||||||||| || |||||||||||| || ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
18723585 |
cgagactgcaacccaacagggtaagtggcaacatgtaagggctgacgactgatcttgttgttgacatatttgactatctttccaataaacttgtattcat |
18723684 |
T |
|
| Q |
212 |
atctattcatgtcaaataa |
230 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
18723685 |
atctattcatgtccaataa |
18723703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 8263 - 8035
Alignment:
| Q |
14 |
caagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtacttg |
113 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||||| ||| ||||| |||| |||||||||||||| | |||||||| |||||| || ||||||||| | |
|
|
| T |
8263 |
caagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgatttcacatgttgtactcg |
8164 |
T |
|
| Q |
114 |
agactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcatat |
213 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
8163 |
agactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatcgccaataaacttgtattcatat |
8064 |
T |
|
| Q |
214 |
ctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|||||||||||| |||| | ||||||||| |
|
|
| T |
8063 |
ctattcatgtcatataagataagttagta |
8035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 121; Significance: 6e-62; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 13081 - 13309
Alignment:
| Q |
14 |
caagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtacttg |
113 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||||| ||| ||||| |||| |||||||||||||| | |||||||| |||||| || ||||||||| | |
|
|
| T |
13081 |
caagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgatttcacatgttgtactcg |
13180 |
T |
|
| Q |
114 |
agactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcatat |
213 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
13181 |
agactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatcgccaataaacttgtattcatat |
13280 |
T |
|
| Q |
214 |
ctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
|||||||||||| |||| | ||||||||| |
|
|
| T |
13281 |
ctattcatgtcatataagataagttagta |
13309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 4118 - 4346
Alignment:
| Q |
14 |
caagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtacttg |
113 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||||| ||| ||||| ||| |||| ||||||||| | |||||||| |||||| || ||||||||| | |
|
|
| T |
4118 |
caagtgttgatttacccaagcctccagtaccataaagtcctaccatgtgggctccatgatcagatccttcatcaagaagcgatttcacatgttgtactcg |
4217 |
T |
|
| Q |
114 |
agactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcatat |
213 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
4218 |
agactgtaatccaacagggtaattggcaacatgtaagggctgatgactgatcttgttggagatgttcttgactatctctccaataaacttgtattcatat |
4317 |
T |
|
| Q |
214 |
ctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
||||| ||||| |||| | ||||||||| |
|
|
| T |
4318 |
ctattaatgtccgataagataagttagta |
4346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 2943 - 3173
Alignment:
| Q |
12 |
tgcaagggttgatttacccaggcctccgatcccataaattccaaccatatggatcccatcatcagatccattatcaagaaacgatttgacttgttgtact |
111 |
Q |
| |
|
|||||| ||||||||||||| ||||| | ||||||| ||| ||||| |||| ||||||||||||| | |||||||| |||||| |||||||||||| |
|
|
| T |
2943 |
tgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttgttgtact |
3042 |
T |
|
| Q |
112 |
tgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccgataaacttgtattcat |
211 |
Q |
| |
|
|||||| | |||||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
3043 |
cgagacttcattccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgactatctctccaataaactcgtattcat |
3142 |
T |
|
| Q |
212 |
atctattcatgtcaaataatacaagttagta |
242 |
Q |
| |
|
||||||||||||| | ||| | ||||||||| |
|
|
| T |
3143 |
atctattcatgtccagtaagataagttagta |
3173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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