View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_low_64 (Length: 273)
Name: NF14353_low_64
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_64 |
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Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 12701019 - 12701284
Alignment:
| Q |
1 |
tttcattaaataacaactcttgtacatatatttgttattgcaatttgagttggttttttgttggtagatatctattgcatctctttctaaaagctgtatt |
100 |
Q |
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| T |
12701019 |
tttcattaaataataactcttgcacatatatttgttattgcaatttgagttggttttttgttggtagatatctattgcatctctttctaaaagctgtatt |
12701118 |
T |
|
| Q |
101 |
tgtcgcttatccgagtaaaaagaggactgttgtattagggcattaagtaactactaaaacattgttggttggatcttcatgatatggacaaacaatgttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12701119 |
tgtcgcttatccgagtaaaaagaggactgttgtattagggcattaagtaactactaaaacattgttggttggatcttcatgatatggacaaacaatgttg |
12701218 |
T |
|
| Q |
201 |
ttttaaggtataacatgaatttaatgcagccctgcttgtgctattctgaatctaatcgtccctatg |
266 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
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| T |
12701219 |
ttttaaggtataacatgaatttaatgcagccatgcttgtgctattctgaatctaatcgtctctatg |
12701284 |
T |
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