View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_low_67 (Length: 266)
Name: NF14353_low_67
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_67 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 22 - 243
Target Start/End: Complemental strand, 24180993 - 24180772
Alignment:
| Q |
22 |
gtggtggttgtggctgtaacttggcgtttatgtgtgccgtttgtgaaaggtgaagactttaaggttatgtttggttgtatttgagaatctgcatctatgt |
121 |
Q |
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| T |
24180993 |
gtggtggttgtggctgtaacttggcgtttatgtgtgccgtttgtgaaaggtgaagactttaaggttatgtttggttgtatttgagaatctgcatctatgt |
24180894 |
T |
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| Q |
122 |
ttcttgaggttatgtccatgtcttgttgattagggtttgttgaattgtagggttgaaaggggaaagggaacaagaggnnnnnnncaagggaaaaggataa |
221 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
24180893 |
ttcttgaggtgatgtccatgtcttgttgattagggtttgttgaattgtagggttgaaaggggaaagggaacaagaggaaaaaaacaagggaaaaggataa |
24180794 |
T |
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| Q |
222 |
tggtatgtttggaagagagaat |
243 |
Q |
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|||| ||||||||||||||||| |
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| T |
24180793 |
tggtttgtttggaagagagaat |
24180772 |
T |
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