View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_low_71 (Length: 258)
Name: NF14353_low_71
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_71 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 13891030 - 13891250
Alignment:
| Q |
18 |
atgaaggttttgagaaggtgaatcaaacagtggaaacagcgcaaggaaacgataaacgaaagatgagggttaagactgtggcaaggaagagtgttgtgaa |
117 |
Q |
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| T |
13891030 |
atgaaggttttgagaaggtgaatcaaacagtggaaacagcgcaaggaaacgataaacgaaagatgagggttaagactgtggcaaggaagagtgttgtgaa |
13891129 |
T |
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| Q |
118 |
cagaatgacaagatttgattttggtaatgatttgggtttggatggaaaggattgtgaattggagtttactgaaggtgctgatgatgtctttgttggggtg |
217 |
Q |
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| T |
13891130 |
cagaataacaagatttgattttggtaatgatttgggtttggatggaaaggattgtgaattggagtttactgaaggtgctgatgatgtctttgttggggtg |
13891229 |
T |
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| Q |
218 |
aggtttaatggatgatgatag |
238 |
Q |
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| T |
13891230 |
aggtttaatggatgatgatag |
13891250 |
T |
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