View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_low_80 (Length: 243)
Name: NF14353_low_80
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_80 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 37847027 - 37846801
Alignment:
| Q |
1 |
tttgttgcattaattcaaggcaaagtgcgataggacaaggaattgttgtcaacaagcactagccaactttaaaattccattcaaaagggtctcaagttta |
100 |
Q |
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| T |
37847027 |
tttgttgcattaattcaaggcaaagtgcgataggacaaggaattgttgtcaacaagcactagccaactttaaaattccattcaaaagggtctcaagttta |
37846928 |
T |
|
| Q |
101 |
acacttgctctagccaatagggtagcctagactctctaaaaatggatgccaatttcctgatttgttctctttaggccctagaacagtactgtcctttgaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
37846927 |
acacttgctctagccaatagggtagcctagactctctaaaaatggatgccaatttcctgatttgttctcttttggccctagaacagtactgtcctttgaa |
37846828 |
T |
|
| Q |
201 |
gggaattgacacaagtccctgaggaaa |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
37846827 |
gggaattgacacaagtccctgaggaaa |
37846801 |
T |
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