View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_low_82 (Length: 237)
Name: NF14353_low_82
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_82 |
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Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 25099685 - 25099465
Alignment:
| Q |
1 |
cgtaggaagaatgttaatatgcaatgatttaaatttgaatttgagatttaaatgcagaagaaaagtgtttgcattacactcctcttcttagtgttagctg |
100 |
Q |
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||||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
25099685 |
cgtagaaagaacgttaatatacagtgatttaaattcgaatttgagatttaaatgcagaagaaaagtgtttgcattacactcctctttctagtgttagctg |
25099586 |
T |
|
| Q |
101 |
cttcattcgctaatgacttattagttgagaaaatgaggcttaagtcaatcattttcctgtccgaaagaaagaattatccacactcctccatttgtttttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
25099585 |
cttcattcgctaatgacttattagttgagaaaatgaggcttaagtcaatcattttcctgtccgaaaaaaagaattatccacactcctccatttgtttttg |
25099486 |
T |
|
| Q |
201 |
ttgctcttttaaacagggaaa |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
25099485 |
ttgctcttttaaacagggaaa |
25099465 |
T |
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