View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14353_low_84 (Length: 236)
Name: NF14353_low_84
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_84 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 9222421 - 9222615
Alignment:
| Q |
1 |
attactttccctctttcttcctttttcgttatcttaatctcaaattaattttctgttttatttaattaacccattcattacgttaattgcataactcctt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9222421 |
attactttccctctttcttcctttttcgttatcttaatctcaaattaattttctgttttatttaattaacccattcattacgttaattgcataactcctt |
9222520 |
T |
|
| Q |
101 |
ataaattataatccctatccatccaaatccaccatcacaatcataatcatcacgattcgattcacaatcacacctttttcttctatcactacgcc |
195 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9222521 |
ataaattataatccctatccatccaaatccaccatcacaatcataatcatcacgattcgattcacaatcacacctttttcttctatcactacgcc |
9222615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University