View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14353_low_90 (Length: 216)
Name: NF14353_low_90
Description: NF14353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14353_low_90 |
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Alignment Details
Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 51273016 - 51273163
Alignment:
| Q |
1 |
tcaatatattttactttgtatttatcatagtagtaaatacataagtaacattatccgtgtgagtttaccgatgctcttcatcagatcaccaatgcacgcc |
100 |
Q |
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| T |
51273016 |
tcaatatattttactttgtatttatcatagtagtaaatacacaagtaacattatccgtgtgagcttaccgatgctcttcatcagatcaccaatgcacgcc |
51273115 |
T |
|
| Q |
101 |
gattacaatactcgtcaatcataacagccatcaaaagacttttcccat |
148 |
Q |
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|||||||||||||||||||||||| ||||| ||||||||||||||||| |
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| T |
51273116 |
gattacaatactcgtcaatcataatagccaccaaaagacttttcccat |
51273163 |
T |
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