View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14356_low_25 (Length: 305)
Name: NF14356_low_25
Description: NF14356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14356_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 61 - 291
Target Start/End: Original strand, 46945018 - 46945251
Alignment:
| Q |
61 |
aataaggatgagaatagatcaaaccgatcgacaaaaa-ctctagtttatgatatctcaaggtcaatcaagatttagtatagaacgctaaattcattagaa |
159 |
Q |
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| T |
46945018 |
aataaggatgagaatagatcatgccgatcgataaaaaaccctagtttatgatatctcaaggtcaatcaagatttagtatagaaggctaaattcattagaa |
46945117 |
T |
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| Q |
160 |
gcttagttaactaaaatggacagactacgggtcat-aacaaaaaactaaagatttaactatgagtcat-nnnnnnnnctattgagtctatgagggcagta |
257 |
Q |
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||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
46945118 |
gcttagttaactaaaatggacagactacgggtcataaaaaaaaaactaaagatttaactatgagtcataaaaaaaaactattgagtctatgagggcagtc |
46945217 |
T |
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| Q |
258 |
tagttaaataaatataaataatattgttgttact |
291 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
46945218 |
tagttaaataaatataaataatattgttgttact |
46945251 |
T |
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