View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14356_low_9 (Length: 440)
Name: NF14356_low_9
Description: NF14356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14356_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 26909105 - 26909369
Alignment:
| Q |
12 |
atagggagacaagatatgatgattgtatcatatcctactataatcttttgtttgatgcaccggtgaaatatgataaattataccttttcttaatcctata |
111 |
Q |
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| T |
26909105 |
atagggagacaagatatgatgattgtatcatatcctactataatcttttgtttgatacaccggtgaaatatgataaattatacctttttttaatcctata |
26909204 |
T |
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| Q |
112 |
tatttactcttttgtaatttgcatcctagatttaggctgggttaaaatcaacctatcaagttaagcaaataaaatttcctttttagccctcacttcatat |
211 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |
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| T |
26909205 |
tatttactcttttgtaatttgcgtcctagatttaggctgggttaaaatcaacctatcaggttaagcaaataaaatttcctttttagccctcattccatat |
26909304 |
T |
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| Q |
212 |
aaacatattgttcatcttactatctattcgactcaaacacgacaacatttccttgtacatgaaca |
276 |
Q |
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|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
26909305 |
aaacatatcgttcatcttactatctattcgactcaagcacgacaacatttccttgtacatgaaca |
26909369 |
T |
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