View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14357_high_8 (Length: 276)
Name: NF14357_high_8
Description: NF14357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14357_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 270
Target Start/End: Original strand, 11489078 - 11489338
Alignment:
| Q |
8 |
ataatacttccttgcttaagatatgtatgctaattttgctactcttgataaatattaaaattgannnnnnn--aaaatattttagaataaattatgccct |
105 |
Q |
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|||| ||||||||||| || |||||||| |||||||| |||||| | | ||||||||||||||| ||||| ||||||||||||| ||||||| |
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| T |
11489078 |
ataaaacttccttgctaaaaatatgtatactaatttt-ctactccttagaaatattaaaattgaattttttttaaaatgttttagaataaatcatgccct |
11489176 |
T |
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| Q |
106 |
ttcactataaaaaatactcttcgaagatgtcaagtcttgaaccgagaacctctaggttgaagaataaatcttgcaaacaagcgacctataggaaactcgc |
205 |
Q |
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||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
11489177 |
ttcactataaaaa-tactcttcaaagatgccaagtcttgaac-gagaacctcaaggttgaagagtaaatcttgcaaacaagcgacctataggaaactcgc |
11489274 |
T |
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| Q |
206 |
ggnnnnnnncactctaaaataactaataaacgaagtctaacaagtataagaaaagtgaataatca |
270 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
11489275 |
gg-gaaaaacactctaaaataactaataaacgaagtctaacaagtataagaaaagtgagtaatca |
11489338 |
T |
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