View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14359_high_22 (Length: 354)
Name: NF14359_high_22
Description: NF14359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14359_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 17 - 272
Target Start/End: Original strand, 45047370 - 45047625
Alignment:
| Q |
17 |
actgcaacttatattcttgcaaagatacaagactgaggatggttcactagaccatgctactgcaacttatcttttgtgatcctaaacgattacttcatta |
116 |
Q |
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| T |
45047370 |
actgcaacttatattcttgcaaagatacaagactgaggatggttcactagaccatgctactgcaacttatcttttgtgatcctaaacgattacttcatta |
45047469 |
T |
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| Q |
117 |
attatctctcccagtcctttgacacccgaacaacgacatttatttaacactgatactagtaataatagaaatatccaagaacatcgactcaaaggagcaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45047470 |
attatctctcccagtcctttgacacccgaacaacgacatttatttaatactgatactagtaataatagaaatatccaagaacatcgactcaaaggagcaa |
45047569 |
T |
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| Q |
217 |
ggagcaagatttgtatgaccacaatacaaataatttgaattcatgcatatacacac |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45047570 |
ggagcaagatttgtatgaccacaatacaaataatttgaattcatgcatatacacac |
45047625 |
T |
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