View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14359_high_24 (Length: 338)

Name: NF14359_high_24
Description: NF14359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14359_high_24
NF14359_high_24
[»] chr5 (12 HSPs)
chr5 (1-338)||(5325815-5326152)
chr5 (242-338)||(14848738-14848834)
chr5 (243-338)||(14849040-14849135)
chr5 (262-338)||(30096875-30096951)
chr5 (243-338)||(12904754-12904849)
chr5 (244-338)||(15644725-15644819)
chr5 (269-338)||(5326352-5326421)
chr5 (200-242)||(15046755-15046797)
chr5 (265-322)||(40608893-40608950)
chr5 (240-326)||(5993886-5993972)
chr5 (241-338)||(15645045-15645142)
chr5 (243-335)||(4700448-4700540)
[»] chr2 (11 HSPs)
chr2 (239-338)||(16105548-16105647)
chr2 (243-338)||(17266398-17266493)
chr2 (242-320)||(6846783-6846861)
chr2 (242-320)||(10841727-10841805)
chr2 (239-298)||(28228666-28228725)
chr2 (245-338)||(11721195-11721288)
chr2 (246-338)||(11689544-11689636)
chr2 (246-338)||(11721423-11721515)
chr2 (242-300)||(11347451-11347509)
chr2 (242-291)||(44364465-44364513)
chr2 (250-326)||(6589704-6589780)
[»] chr4 (7 HSPs)
chr4 (243-338)||(11857892-11857987)
chr4 (245-338)||(11858122-11858216)
chr4 (242-326)||(32063681-32063765)
chr4 (243-338)||(7280209-7280304)
chr4 (240-320)||(7280457-7280537)
chr4 (229-303)||(36008830-36008904)
chr4 (245-295)||(37800953-37801003)
[»] chr7 (14 HSPs)
chr7 (242-338)||(15714625-15714721)
chr7 (241-320)||(23609011-23609090)
chr7 (243-325)||(23608808-23608890)
chr7 (239-297)||(18855406-18855464)
chr7 (229-287)||(20563720-20563778)
chr7 (237-325)||(20426676-20426764)
chr7 (242-320)||(7354861-7354939)
chr7 (251-335)||(15714404-15714487)
chr7 (250-300)||(34793911-34793961)
chr7 (241-293)||(18131794-18131846)
chr7 (241-293)||(18143582-18143634)
chr7 (250-338)||(18670196-18670284)
chr7 (250-326)||(19204496-19204572)
chr7 (246-294)||(22539369-22539417)
[»] chr1 (10 HSPs)
chr1 (243-338)||(9443572-9443667)
chr1 (251-338)||(13245858-13245945)
chr1 (261-338)||(42267533-42267610)
chr1 (251-338)||(13246080-13246167)
chr1 (243-338)||(42267303-42267398)
chr1 (252-338)||(10304188-10304274)
chr1 (245-338)||(19227192-19227285)
chr1 (246-338)||(10303926-10304018)
chr1 (242-319)||(32928166-32928243)
chr1 (242-334)||(22103609-22103700)
[»] chr3 (15 HSPs)
chr3 (239-320)||(44654613-44654694)
chr3 (242-338)||(14634085-14634181)
chr3 (241-338)||(20704660-20704757)
chr3 (242-338)||(20704429-20704525)
chr3 (246-338)||(30381077-30381169)
chr3 (238-309)||(26479287-26479358)
chr3 (243-338)||(44654836-44654931)
chr3 (242-295)||(26479069-26479122)
chr3 (241-316)||(1079576-1079651)
chr3 (250-309)||(32431554-32431613)
chr3 (241-298)||(1078535-1078592)
chr3 (241-326)||(2796177-2796262)
chr3 (241-326)||(6956246-6956331)
chr3 (241-326)||(21186040-21186125)
chr3 (242-323)||(54317978-54318059)
[»] chr6 (7 HSPs)
chr6 (245-338)||(13378527-13378620)
chr6 (250-338)||(26464532-26464620)
chr6 (251-338)||(1215015-1215102)
chr6 (241-295)||(28498401-28498455)
chr6 (241-295)||(29810812-29810866)
chr6 (242-291)||(22054080-22054128)
chr6 (248-308)||(1215229-1215289)
[»] scaffold0181 (1 HSPs)
scaffold0181 (244-320)||(9454-9530)
[»] chr8 (14 HSPs)
chr8 (251-338)||(20050091-20050178)
chr8 (245-309)||(22890356-22890420)
chr8 (243-326)||(2535895-2535978)
chr8 (246-320)||(9499611-9499684)
chr8 (244-338)||(31873232-31873326)
chr8 (242-338)||(13084820-13084916)
chr8 (242-294)||(2693689-2693741)
chr8 (244-338)||(9499930-9500024)
chr8 (240-338)||(11291024-11291122)
chr8 (242-295)||(10749884-10749937)
chr8 (250-338)||(24085780-24085869)
chr8 (240-300)||(7313376-7313436)
chr8 (246-338)||(10794178-10794270)
chr8 (246-294)||(22890101-22890149)
[»] scaffold0291 (1 HSPs)
scaffold0291 (243-320)||(6499-6576)
[»] scaffold0117 (1 HSPs)
scaffold0117 (243-338)||(15783-15876)
[»] scaffold0184 (1 HSPs)
scaffold0184 (241-323)||(8204-8286)
[»] scaffold0100 (1 HSPs)
scaffold0100 (246-316)||(31023-31093)
[»] scaffold0031 (1 HSPs)
scaffold0031 (250-326)||(68972-69048)
[»] scaffold0027 (1 HSPs)
scaffold0027 (245-289)||(14360-14404)


Alignment Details
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 5325815 - 5326152
Alignment:
Q  1 tcaagtttctagctacaatctacaactaacttattaatgcaacatattttagtcagaacctattgaaatccacgtgagagtcaaggtattgtaaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  5325815 tcaagtttctagctacaatctacaactaacttattaattcaacatattttagtcagaatctattgaaatccacatgagagtcaaggtattgtaaattgta 5325914  T
Q  101 ataagagtgaaagttgtctaattaatagagctcattagtgcaatcacagccaacatatcaaagatatttgattgccnnnnnnncaaagataatcagtcca 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||       |||||||||||| ||||    
T  5325915 ataagagtgaaagttgtctaattaataaagctcattagtgcaatcacagtcaacatatcaaatatatttgattgccaaaaaaacaaagataatcaatcca 5326014  T
Q  201 accaattcaaacttctgcatgaaacaggtatagcaatatttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||    
T  5326015 accaattcaaacttctgcatgaaacaggtatagcaatatttaggcttttatatgtgtttaatccctgcaaataggggtcatttaaaaaatggtccctgca 5326114  T
Q  301 ttccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||| |||||||||| |||||  ||||||||||    
T  5326115 ttccttaatcctggcattttgccctttcaaaatttaat 5326152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 14848738 - 14848834
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||   ||||||||||||| || ||||||| |||| | ||||||||||    
T  14848738 aggcttttatatgtgtttagtccctgcaaatagggatcatttaaaaaatggtttgtgcattccttaatccttgcatttttccctcccaaaatttaat 14848834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 14849135 - 14849040
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||| ||| |||| |  ||||||||||||||||||||||||||| || ||||||||||  ||||||||| |||| | ||||||||||    
T  14849135 ggcttttatatgtgtttagtccttctaaatagggatcatttaaaaaatggtccatgtattccttaatcgtggcattttgccctaccaaaatttaat 14849040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 30096951 - 30096875
Alignment:
Q  262 tccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||| || ||||| ||||||||||||||||||||| || | |||||||||||| |||||||| |||||| |||||    
T  30096951 tccctgtaattaggggtcatttaaaaaatggtccctgtatccattaattctggcaatttaccctcctaaaaattaat 30096875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 12904754 - 12904849
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||| | ||| ||||||  |||||||||||||||||||||||||||||| |||| ||||| ||| || |||  ||| | ||||||||||    
T  12904754 ggcttttatatctgtttagtccctctaaatagggatcatttaaaaaatggtccctgtattcgttaatcctgacaatttgtcctcccaaaatttaat 12904849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 15644725 - 15644819
Alignment:
Q  244 gcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||| ||| ||||||| |||||| | |||||||||||||| |||| | |||||||||| ||| ||||||  ||| | ||||||||||    
T  15644725 gcttttatatgtgtttagtccctgtaaatagaggtcatttaaaaaatgatccccgtattccttaatcctgacattttttcctcccaaaatttaat 15644819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 5326421 - 5326352
Alignment:
Q  269 aaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||| |||||||||||||||||| |||||||||||||  |||||||||  ||| | ||||||||||    
T  5326421 aaataggggtcatttaaaaaatggtccatgcattccttaatcatggcattttgtcctcccaaaatttaat 5326352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 15046755 - 15046797
Alignment:
Q  200 aaccaattcaaacttctgcatgaaacaggtatagcaatattta 242  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  15046755 aaccaaatcaaacttctgcttgaaacaggtatagcaatattta 15046797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 40608893 - 40608950
Alignment:
Q  265 ctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttac 322  Q
    ||||||||| |  |||||||||||||||||| || |||||||||| ||||||||||||    
T  40608893 ctgcaaatatgagtcatttaaaaaatggtccatgtattccttaatcctggcattttac 40608950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 5993886 - 5993972
Alignment:
Q  240 ttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    ||||||||  ||||||||||  ||| ||||| ||||| || |||||||| ||||||||| | ||  ||||||||||| |||||||||    
T  5993886 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttaccctt 5993972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 15645142 - 15645045
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||||| ||| || |||||||||  || ||||||||||| ||||   || |||| ||||| ||| |||||| |||| | ||||||||||    
T  15645142 taggcttttatatgtgtttagttcctgcaaatgtgggtcatttaaaaattggtttatgtattcgttaatcctgacattttgccctcccaaaatttaat 15645045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 4700540 - 4700448
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaattt 335  Q
    ||||||||||||| ||| |||| |  |||||||| |||||||||||||| | | || |||| |||||| || || ||| |||||| |||||||    
T  4700540 ggcttttatatgtgtttcgtccttataaataggggtcatttaaaaaatgattcttgtattcattaattatgacaattttcccttccaaaattt 4700448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 16105548 - 16105647
Alignment:
Q  239 tttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||||||| ||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| |||||| |||| | ||||||||||    
T  16105548 tttaggcttttatatgtgtttagtccctgtaaataggggccatttaaaaaatggtccctgcattccttaatcctgacattttgccctcccaaaatttaat 16105647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 17266398 - 17266493
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||  || |||| || || ||| || ||| |||||| ||||||||||    
T  17266398 ggcttttatatgtgtttagtccctgtaaatagggatcatttaaaaaatggtcaatgtattcgtttatcctgacaattttcccttccaaaatttaat 17266493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 6846783 - 6846861
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    |||||||||||||| |||  ||||||||||||||| ||||||||||| |||||| || |||| ||||| | ||||||||    
T  6846783 aggcttttatatgtgtttaatccctgcaaataggggtcatttaaaaattggtccttgaattcgttaatccgggcatttt 6846861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 10841805 - 10841727
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||  |  |||||| |||| ||||| ||||||||||    
T  10841805 aggcttttatatgtgtttagtccctgcaaataggggtcatttaaaattttatccctgaattcgttaatcctggcatttt 10841727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 28228666 - 28228725
Alignment:
Q  239 tttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctg 298  Q
    |||||||||| |||||| ||| |||||||||| ||||| ||||||||||| |||||||||    
T  28228666 tttaggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctg 28228725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 11721195 - 11721288
Alignment:
Q  245 cttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||| | ||| |||| || |||||||| |||||||||||||| ||| || |||| ||||| || ||||||| |||| | ||||||||||    
T  11721195 cttttatatatgtttagtccttggaaataggggtcatttaaaaaatgatccttgtattctttaatcctagcattttgccctgccaaaatttaat 11721288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 11689544 - 11689636
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||| ||| |||| || |||||||| ||||||||||| || |||||| |||| ||||| | ||||||||  ||| | ||||||||||    
T  11689544 ttttatatgtgtttagtccttggaaataggggtcatttaaaaattgatccctgtattctttaatcccggcattttgtcctgccaaaatttaat 11689636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 11721515 - 11721423
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||| ||| |||  || |||||||| ||||||||||| || |||||| |||| ||||| ||| ||||||| ||| | ||||||||||    
T  11721515 ttttatatgtgtttagtctttggaaataggggtcatttaaaaattgatccctgtattctttaatcctgacattttatcctgccaaaatttaat 11721423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 11347451 - 11347509
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgca 300  Q
    ||||||||||| || ||| || | ||||||||||||||||||||||  |||||||||||    
T  11347451 aggcttttatacgtgtttagttcttgcaaatagggatcatttaaaatttggtccctgca 11347509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 44364465 - 44364513
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatg 291  Q
    |||||||||||||| ||| ||||||||||||| || ||||||||||||||    
T  44364465 aggcttttatatgtgtttagtccctgcaaata-ggttcatttaaaaaatg 44364513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 6589780 - 6589704
Alignment:
Q  250 atatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    |||||| ||| |||||||||| || || ||||||||||| |||||| || | || ||||||||||||  ||||||||    
T  6589780 atatgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattaccctt 6589704  T

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Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 11857892 - 11857987
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||| ||| |||||||||||||| | ||||||||||||||||||||| |||||||||| |||||||||| | || | ||||||||||    
T  11857892 ggcttttatatgtgtttagtccctgcaaatagaggtcatttaaaaaatggtccctgtattccttaatcctggcattttgctctgccaaaatttaat 11857987  T

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Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 11858216 - 11858122
Alignment:
Q  245 cttttatatgtattttgtccctgcaaatagggatcatttaaaaaa-tggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||||| |||||||||||||||  |||||||||||| ||||||||| |||||||||| |||||||||||||||   ||||||||||    
T  11858216 cttttatatgtatttagtccctgcaaataggagtcatttaaaaaattggtccctgtattccttaatcctggcattttaccctgtcaaaatttaat 11858122  T

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Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 32063765 - 32063681
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||| ||||  ||| | || ||||| ||||||  ||||||||    
T  32063765 aggctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattaccctt 32063681  T

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Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 7280209 - 7280304
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||| | ||| |||| || |||||||| ||||||||||||||||| ||| |||| ||||| ||| |||||| ||||   ||||||||||    
T  7280209 ggcttttatatatgtttagtccttgtaaataggggtcatttaaaaaatggtctctgtattctttaatcctgtcattttgccctgtcaaaatttaat 7280304  T

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Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 7280537 - 7280457
Alignment:
Q  240 ttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    |||||||||||||||| |||    |||||||||||| ||||||| || |||||||| || |||| ||||||||| ||||||    
T  7280537 ttaggcttttatatgtgtttatatcctgcaaataggaatcattttaataatggtccttgtattctttaattctgacatttt 7280457  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 36008830 - 36008904
Alignment:
Q  229 tatagcaatatttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattc 303  Q
    ||||| |||||||||||||  ||||||||||  ||| || || |||||||| |||||||| ||||||||| ||||    
T  36008830 tatagtaatatttaggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattc 36008904  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 37801003 - 37800953
Alignment:
Q  245 cttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtcc 295  Q
    |||||| |||| ||| |||||| ||||||||| ||||||||||||||||||    
T  37801003 cttttacatgtgtttagtccctacaaataggggtcatttaaaaaatggtcc 37800953  T

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Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 15714721 - 15714625
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||||||||||| ||| |||||| |||| | || |||||||    
T  15714721 aggcttttatatgtgtttagtccctgcaaataggggtcatttaaaaattggtctctgcattccttaatcctgacattttgccctgccaagatttaat 15714625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 23609090 - 23609011
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||    
T  23609090 taggcttttatatgtgtttaatccctgcaaatagggatcatttaaaaaatggtccctatattccttaatcctgacatttt 23609011  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 23608808 - 23608890
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccct 325  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||||||| ||| |||||| |||||||||| ||||    
T  23608808 ggcttttatatgtgtttagtccttgcaaataggggtcatttaaaaattggtccctgtatttcttaatcctggcattttgccct 23608890  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 18855406 - 18855464
Alignment:
Q  239 tttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccct 297  Q
    |||||||||| |||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  18855406 tttaggctttaatatgtttttcgtccctgcaaataggggtcatttaaaaaatggtccct 18855464  T

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Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 20563720 - 20563778
Alignment:
Q  229 tatagcaatatttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaa 287  Q
    ||||| || |||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  20563720 tatagaaaaatttaggcttttatatgtgtttagtccctgcaaataggggtcatttaaaa 20563778  T

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Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 237 - 325
Target Start/End: Complemental strand, 20426764 - 20426676
Alignment:
Q  237 tatttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccct 325  Q
    |||||||||||  ||||||||||  ||||||||| ||| | || |||||||| ||||||||| ||||  |||| |||||||||||||||    
T  20426764 tatttaggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccct 20426676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 7354861 - 7354939
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    ||||||||||| || ||| || ||||||||||||| ||||||||||| ||||||||  |||| |||||  |||||||||    
T  7354861 aggcttttatacgtgtttagttcctgcaaataggggtcatttaaaaattggtccctatattcgttaatcgtggcatttt 7354939  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 15714404 - 15714487
Alignment:
Q  251 tatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaattt 335  Q
    ||||| ||| ||||||||||||| || |||||| ||||||||| | || |||||||||| |||||||||| |||| | |||||||    
T  15714404 tatgtgtttagtccctgcaaatatgggtcattt-aaaaatggttcatgtattccttaatcctggcattttgccctgccaaaattt 15714487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 34793911 - 34793961
Alignment:
Q  250 atatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgca 300  Q
    ||||||||||| ||||||||||||||| || |||||||| |||||| ||||    
T  34793911 atatgtattttatccctgcaaataggggtcgtttaaaaattggtccttgca 34793961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 18131846 - 18131794
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggt 293  Q
    ||||||||||||| | ||||||| ||||||||| |||||||||| ||| ||||    
T  18131846 taggcttttatatatgttttgtctctgcaaatatggatcatttataaattggt 18131794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 18143634 - 18143582
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggt 293  Q
    ||||||||||||| | ||||||| ||||||||| |||||||||| ||| ||||    
T  18143634 taggcttttatatatgttttgtctctgcaaatatggatcatttataaattggt 18143582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 18670284 - 18670196
Alignment:
Q  250 atatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||  ||| ||||| ||||| || |||||||||||||||||| |||| ||||| || ||| ||| |||| | ||| ||||||    
T  18670284 atatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaagtttaat 18670196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 19204496 - 19204572
Alignment:
Q  250 atatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    ||||||||||  ||| || || ||||| || |||||||| ||||||||| | || |||||||||||| |||||||||    
T  19204496 atatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttaccctt 19204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 22539417 - 22539369
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtc 294  Q
    |||||||| ||||| ||||||||||||| |  |||||||||||||||||    
T  22539417 ttttatatatatttagtccctgcaaatatgagtcatttaaaaaatggtc 22539369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 9443572 - 9443667
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||  ||| | ||||||||||    
T  9443572 ggcttttatatgtgtttagtccttgcaaataggggtcatttaaaaaatggtctctgtattccttaatcctggcattttgtcctcccaaaatttaat 9443667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 13245858 - 13245945
Alignment:
Q  251 tatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||| |||||||||||||||  ||||||||||| |||||| || |||||||||| ||||||||||||||| | ||||||||||    
T  13245858 tatgtatttagtccctgcaaataggattcatttaaaaattggtccttgtattccttaatcctggcattttaccctgccaaaatttaat 13245945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 42267610 - 42267533
Alignment:
Q  261 gtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||||  | ||||||||||||||||| ||| |||||||||| |||||||||| |||| | ||||||||||    
T  42267610 gtccctgcaaataaaggtcatttaaaaaatggtctctgtattccttaatcctggcattttgccctaccaaaatttaat 42267533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 13246167 - 13246080
Alignment:
Q  251 tatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||| ||| |||| |||||||| | ||||||||||||||||||| || |||||||||| || ||||||| |||| | ||||||||||    
T  13246167 tatgtgtttagtccttgcaaatatgaatcatttaaaaaatggtccatgtattccttaatcctagcatttttccctaccaaaatttaat 13246080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 42267303 - 42267398
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||| |||  ||||||||||||||| ||||||||||| ||||||||| |||| ||||| ||| || |||  ||| | ||||||||||    
T  42267303 ggcttttatatgtgtttattccctgcaaataggggtcatttaaaaattggtccctgtattctttaatcctgacaatttgtcctgccaaaatttaat 42267398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 10304274 - 10304188
Alignment:
Q  252 atgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||| ||| |||||||||||||||| |||||||||||||||||  || |||| |||||||||||| ||| || | | ||||||||||    
T  10304274 atgtgtttagtccctgcaaataggggtcatttaaaaaatggtcaatgtattcgttaattctggcaatttgccttcccaaaatttaat 10304188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 19227285 - 19227192
Alignment:
Q  245 cttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||| ||| ||| || |||||| || ||||||||||||| |||| || |||||||||| ||| |||||| |||| | ||||||||||    
T  19227285 cttttatatgtgtttagtctctacaaataagggtcatttaaaaaatagtccttgtattccttaatcctgacattttgccctgccaaaatttaat 19227192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 10303926 - 10304018
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||| ||| ||| |||||||||||  |||||||||||||| ||  || |||| ||||| |||||| ||| |||||| ||||||||||    
T  10303926 ttttatatgtgtttggtctctgcaaataggagtcatttaaaaaatgatctatgtattcgttaatcctggcaatttgcccttccaaaatttaat 10304018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 32928243 - 32928166
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattt 319  Q
    ||||||||||| || ||| |||| ||||||||||| |||||||| || |||||| || |||  |||||||||||||||    
T  32928243 aggcttttatacgtgtttagtccgtgcaaataggggtcatttaagaattggtccatgaatttgttaattctggcattt 32928166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 334
Target Start/End: Original strand, 22103609 - 22103700
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatt 334  Q
    ||||||||||| || ||| ||||| | |||||||| |||||||||||||||||| || |||  |||||  ||||||||| |||||| ||||||    
T  22103609 aggcttttatacgtgtttagtccc-gtaaataggggtcatttaaaaaatggtccatgtattttttaatcttggcattttgcccttccaaaatt 22103700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 320
Target Start/End: Original strand, 44654613 - 44654694
Alignment:
Q  239 tttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    ||||||||||||||||| ||| ||||||| |||||||| |||||||||||||||||| || ||| |||||||| ||||||||    
T  44654613 tttaggcttttatatgtgtttagtccctgtaaataggggtcatttaaaaaatggtccatgtatttcttaattcaggcatttt 44654694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 14634181 - 14634085
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||| | ||| |||| ||||||||||| ||||||||||| ||||||||| ||||||||||   |||||||| |||| | ||||||||||    
T  14634181 aggcttttatatatgtttagtccttgcaaataggggtcatttaaaaattggtccctgtattccttaatcgaggcattttgccctgccaaaatttaat 14634085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 20704757 - 20704660
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||||| ||| | |||||||||||||||| |||||||||||||| | || ||| |||||| |||| ||||| | || | ||||||||||    
T  20704757 taggcttttatatgtgtttagcccctgcaaatagggattatttaaaaaatggttcatgtatttcttaatcctggtattttgctctgccaaaatttaat 20704660  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 20704429 - 20704525
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||||| ||| ||||||||||||| |  |||||||||||||||| |||  ||||||||||  || |||||| |||| | ||||||||||    
T  20704429 aggcttttatatgtgtttagtccctgcaaataagagtcatttaaaaaatggttcctatattccttaatcttgacattttgccctgccaaaatttaat 20704525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 30381169 - 30381077
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||| |||| ||| |||| || |||||||  |||||||||||||||||| || |||| |||||||||||||||| |||| | ||||||||||    
T  30381169 ttttacatgtgtttagtccttgtaaataggagtcatttaaaaaatggtccatgtattctttaattctggcattttgccctgccaaaatttaat 30381077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 26479358 - 26479287
Alignment:
Q  238 atttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaat 309  Q
    ||||||| |||||||||| ||| ||||||| |||||||| ||||||||||||||||| ||| | ||||||||    
T  26479358 atttaggtttttatatgtgtttagtccctgtaaataggggtcatttaaaaaatggtctctgtaatccttaat 26479287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 44654931 - 44654836
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||| | |||| || |||||| |||  |||||||||  ||| | ||||||||||    
T  44654931 ggcttttatatgtgtttagtccctgcaaataggggtcatttaaaaatttgtccatgtattcctaaatcatggcattttggcctgccaaaatttaat 44654836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 26479069 - 26479122
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtcc 295  Q
    |||||||||||||| ||| |||||||||||||||| | ||||||||||||||||    
T  26479069 aggcttttatatgtgtttagtccctgcaaataggggtgatttaaaaaatggtcc 26479122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 1079651 - 1079576
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggca 316  Q
    |||||||| |||||| |||  ||||||||| ||||| ||||||||||| ||||||||| | || ||||| ||||||    
T  1079651 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggca 1079576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 32431613 - 32431554
Alignment:
Q  250 atatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaat 309  Q
    |||||||||| ||||||| || ||||| ||||||||||| ||||||||||| || |||||    
T  32431613 atatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaat 32431554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 1078535 - 1078592
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctg 298  Q
    |||||||| |||||| ||| |||| ||||| ||||| ||||||||||| |||||||||    
T  1078535 taggctttaatatgtttttcgtccatgcaattaggggtcatttaaaaattggtccctg 1078592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 2796177 - 2796262
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    |||||||  ||||||||||  ||| ||||| ||||| ||||||||||| ||||||||| | ||  |||| |||||| |||||||||    
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttaccctt 2796262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 6956246 - 6956331
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    |||| ||| |||||| ||| |||||||||| ||||||||||||||||| | ||||||  | || ||||| ||||||  ||||||||    
T  6956246 taggttttaatatgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattaccctt 6956331  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 21186125 - 21186040
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    |||||||| |||||| |||||||| ||||| ||||| ||||||||||| |||| | || | || ||||| ||||||  ||||||||    
T  21186125 taggctttaatatgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattaccctt 21186040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 54318059 - 54317978
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacc 323  Q
    |||||||||||||| ||| |||| |||||||| |  |||||||| ||||||||| || |||| ||||| ||| || ||||||    
T  54318059 aggcttttatatgtgtttagtccttgcaaatatgagtcatttaagaaatggtccatgtattcgttaatactgacaatttacc 54317978  T

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Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 13378527 - 13378620
Alignment:
Q  245 cttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||| ||||||||||  ||||||||||||||| |||||||||||||||||| || |||  ||||| |||||| ||| |||| ||||||||||||    
T  13378527 ctttaatatgtatttactccctgcaaataggggtcatttaaaaaatggtccttgtatttgttaatcctggcaatttgccctcctaaaatttaat 13378620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 26464620 - 26464532
Alignment:
Q  250 atatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||  ||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||| ||| |||| |||||| |||||    
T  26464620 atatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggcaattttccctcctaaaaattaat 26464532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 1215015 - 1215102
Alignment:
Q  251 tatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||| ||| |||||||||||||||| |||||||||| |||||| ||| ||| |||||| ||| |||||| ||||   ||||||||||    
T  1215015 tatgtgtttagtccctgcaaatagggctcatttaaaacatggtctctgtattgcttaatcctgacattttgccctgtcaaaatttaat 1215102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 28498455 - 28498401
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtcc 295  Q
    |||||||| |||||| ||| |||||||||| ||||| ||||||||||| ||||||    
T  28498455 taggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtcc 28498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 29810866 - 29810812
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtcc 295  Q
    |||||||| |||||| ||| |||||||||| ||||| ||||||||||| ||||||    
T  29810866 taggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtcc 29810812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 22054080 - 22054128
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatg 291  Q
    |||||||||||||| ||| ||||||||||||| || ||||||||||||||    
T  22054080 aggcttttatatgtgtttagtccctgcaaata-ggttcatttaaaaaatg 22054128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 1215289 - 1215229
Alignment:
Q  248 ttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaa 308  Q
    |||||||| |||  ||||||||||||||| |||||||||||||| | | || |||||||||    
T  1215289 ttatatgtgtttactccctgcaaatagggctcatttaaaaaatgattcatgtattccttaa 1215229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 9530 - 9454
Alignment:
Q  244 gcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    |||||||||||| ||| |||||| |||| |||||||||||||||||||||||||  |||||||||| |||| |||||    
T  9530 gcttttatatgtgtttagtccctccaaacagggatcatttaaaaaatggtccctatattccttaatcctggtatttt 9454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 20050091 - 20050178
Alignment:
Q  251 tatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||| ||| ||||| | |||||||| ||||||||||| |||||| || ||||||||||||||||||||| |||| | ||||||||||    
T  20050091 tatgtgtttagtcccaggaaataggggtcatttaaaaattggtccatgtattccttaattctggcattttgccctgccaaaatttaat 20050178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 22890420 - 22890356
Alignment:
Q  245 cttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaat 309  Q
    ||||||||||| ||| |||||||||||||||| |||||||||| ||||| |||| ||||||||||    
T  22890420 cttttatatgtgtttagtccctgcaaataggggtcatttaaaacatggtacctgtattccttaat 22890356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 326
Target Start/End: Complemental strand, 2535978 - 2535895
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    |||||| |||||||||| |||||||||| ||||| ||||||||||| ||||||||| | || ||||| ||||||  ||||||||    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattaccctt 2535895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 9499611 - 9499684
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    |||||||||| ||| |||| ||||||||   ||||||||||||||||||| || |||||||||||||||||||||    
T  9499611 ttttatatgtgtttagtccttgcaaataaa-atcatttaaaaaatggtccatgtattccttaattctggcatttt 9499684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 31873326 - 31873232
Alignment:
Q  244 gcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||| ||| ||||||||||||| || |||||||||||||||||| |  |||| |||||  ||||| ||| |||| | ||||||||||    
T  31873326 gcttttatatgtgtttagtccctgcaaatatgggtcatttaaaaaatggtccttttattcgttaatcttggcaatttgccctcccaaaatttaat 31873232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 13084916 - 13084820
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||||| ||| ||| ||||||||| |  ||||||||||| |||||| || ||||||||||  ||| ||||| |||| | ||||||||||    
T  13084916 aggcttttatatgtgtttagtctctgcaaatatgagtcatttaaaaattggtccatgtattccttaatcttggaattttgccctgccaaaatttaat 13084820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 2693689 - 2693741
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtc 294  Q
    |||||||||||||| ||| ||||||||||||| || || ||||||||||||||    
T  2693689 aggcttttatatgtgtttagtccctgcaaatatgggtcgtttaaaaaatggtc 2693741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 9500024 - 9499930
Alignment:
Q  244 gcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||| ||||| ||| |||| | ||||||||| ||  |||||||||||| | || ||| |||||| ||| ||||||||||| | ||||||||||    
T  9500024 gcttttgtatgtgtttagtccttacaaataggggtcgattaaaaaatggttcatgtatttcttaatcctgacattttaccctcccaaaatttaat 9499930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 11291024 - 11291122
Alignment:
Q  240 ttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    ||||||||||||| || ||| || ||| ||||||||  |||||||||||||||| | || |||||||||| |||  ||||| || | | ||||||||||    
T  11291024 ttaggcttttatacgtgtttagttcctacaaataggagtcatttaaaaaatggttcttgtattccttaatcctgatattttgccatgccaaaatttaat 11291122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 10749937 - 10749884
Alignment:
Q  242 aggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtcc 295  Q
    ||||||| |||||| ||| |||| ||||| ||||||||||||||||| ||||||    
T  10749937 aggctttaatatgtgtttcgtccttgcaattagggatcatttaaaaattggtcc 10749884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 24085780 - 24085869
Alignment:
Q  250 atatgtattttgtccctgcaaatag-ggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||| ||| |||||||||||||| || |||| ||||||||||||| || ||| |||||| ||| ||||||  ||| | ||||||||||    
T  24085780 atatgtgtttagtccctgcaaatagagggtcatataaaaaatggtccttgtatttcttaatcctgacattttgtcctgccaaaatttaat 24085869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 7313436 - 7313376
Alignment:
Q  240 ttaggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgca 300  Q
    ||||||||  ||||||||||  ||||||||||||||| || |||||||| |||||| ||||    
T  7313436 ttaggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgca 7313376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 10794178 - 10794270
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||| ||| | ||||  ||||||||||||||||||||||| ||  |  ||||||||||| || ||||||| ||| | ||| ||||||    
T  10794178 ttttatatgtgtttcgaccctataaatagggatcatttaaaaaatgatcattatattccttaattatgacattttatcctgccaaagtttaat 10794270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 22890101 - 22890149
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtc 294  Q
    |||||||||| ||| ||||| | |||||||| |||||||||||||||||    
T  22890101 ttttatatgtgtttagtcccggtaaataggggtcatttaaaaaatggtc 22890149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 6499 - 6576
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcatttt 320  Q
    |||||||||||||  || ||||| |||||||||| |||||||||||||||||| || ||| |||||| ||||||||||    
T  6499 ggcttttatatgtgattagtcccagcaaataggggtcatttaaaaaatggtccatgtatttcttaatcctggcatttt 6576  T

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Target: scaffold0117 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 15876 - 15783
Alignment:
Q  243 ggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacccttctaaaatttaat 338  Q
    |||||||||||||  || |||||||||||||||| ||||||| ||||| || |||| |||| ||||| | |||||||| |||| | ||||||||||    
T  15876 ggcttttatatgt--ttagtccctgcaaataggggtcatttagaaaattgttcctgtattctttaatccaggcatttttccctgccaaaatttaat 15783  T

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Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 8286 - 8204
Alignment:
Q  241 taggcttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttacc 323  Q
    ||||||||||||||||||| |||| |||||| ||   | ||||||||| || |||||| |||| | |||||||||||||||||    
T  8286 taggcttttatatgtatttagtccttgcaaacagatgttatttaaaaattgatccctgtattcttcaattctggcattttacc 8204  T

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Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 31023 - 31093
Alignment:
Q  246 ttttatatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggca 316  Q
    |||||||||| |||  |||||||||||| |  |||||||||||||||| | || |||||||||||||||||    
T  31023 ttttatatgtgtttaatccctgcaaatatgagtcatttaaaaaatggttcatgtattccttaattctggca 31093  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 68972 - 69048
Alignment:
Q  250 atatgtattttgtccctgcaaatagggatcatttaaaaaatggtccctgcattccttaattctggcattttaccctt 326  Q
    ||||||||||  ||| ||||| ||||| ||||||||||| ||||||||| | ||  |||| |||||| |||||||||    
T  68972 atatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttaccctt 69048  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 14404 - 14360
Alignment:
Q  245 cttttatatgtattttgtccctgcaaatagggatcatttaaaaaa 289  Q
    ||||||||||| ||| | || ||||||||||||||||||||||||    
T  14404 cttttatatgtgtttagcccttgcaaatagggatcatttaaaaaa 14360  T

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