View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14359_low_30 (Length: 324)
Name: NF14359_low_30
Description: NF14359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14359_low_30 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 6 - 274
Target Start/End: Original strand, 43369005 - 43369273
Alignment:
| Q |
6 |
aaagataaattactttgttatagatatacacacatgtatatgtaaatacaataaacaaaaaatggcagaatcatatgcatttgtctatgggttatgatcg |
105 |
Q |
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| T |
43369005 |
aaagataaattactttgttatagatatacacacatgtatatgtaaatccaataaacaaaaaatggcagaatcatatgcatttgtctatgggttatgatcg |
43369104 |
T |
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| Q |
106 |
aaaggataacaaattaaagggagaagattttctatttctaagaaaaagagaaaggaaaaagtggtttcttaatgtatacgtgtgtcacatgtaaaaagta |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43369105 |
aaaggataacaaattaaagggagaagattttctatttctaagaaaaagagaaaggaaaaagtggtttcttaatgtatacgtgtgtcacatgtaaaaagta |
43369204 |
T |
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| Q |
206 |
acaagtaacaaggattgatggatgagtatgttgggcacaagttctttagctaattaacttcattagcac |
274 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43369205 |
acaagtaacaaggattgatggatgagtatgttgggcacaagttctttagctaattaacttcattagcac |
43369273 |
T |
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