View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14359_low_41 (Length: 256)
Name: NF14359_low_41
Description: NF14359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14359_low_41 |
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Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 12 - 238
Target Start/End: Original strand, 2177472 - 2177694
Alignment:
| Q |
12 |
gagatgaatacaagtcaaaacaaccatactgaggttctttgcatggtcttacttagtatcaactctactagctccaactcctccatgatagattccaaaa |
111 |
Q |
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| T |
2177472 |
gagaagaatacaagtcaaaccaaccatactgaggttctttgcatcgtcttacttagtatcaactctactagctccaactcctccatgatagattccaaaa |
2177571 |
T |
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| Q |
112 |
gccccaaaatagaatggatgatggtatgtgacatctagggttggttggttggtggcgctggaattagggttaacaactctctcttgcctatgctgaattt |
211 |
Q |
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| T |
2177572 |
gctccaaaatagaatggatgatggtatgtgacaggtag----ggatggtcgttggcgcttgaattagggttaacaactctctcttgcctatgctgaattt |
2177667 |
T |
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| Q |
212 |
ggtcttgtataagacatgtactagttt |
238 |
Q |
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|||||| ||||||||||||| |||||| |
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| T |
2177668 |
ggtcttatataagacatgtaatagttt |
2177694 |
T |
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