View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14359_low_48 (Length: 238)

Name: NF14359_low_48
Description: NF14359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14359_low_48
NF14359_low_48
[»] chr5 (16 HSPs)
chr5 (55-224)||(31626099-31626269)
chr5 (130-214)||(31628836-31628920)
chr5 (43-104)||(24329993-24330055)
chr5 (45-107)||(6538865-6538928)
chr5 (43-104)||(20985540-20985602)
chr5 (43-105)||(34693227-34693290)
chr5 (39-101)||(35616806-35616869)
chr5 (43-104)||(3031832-3031894)
chr5 (43-111)||(11954422-11954492)
chr5 (40-104)||(4173132-4173197)
chr5 (41-70)||(6458801-6458830)
chr5 (55-103)||(27005502-27005551)
chr5 (45-101)||(30103464-30103521)
chr5 (43-103)||(41192586-41192647)
chr5 (43-102)||(16553504-16553564)
chr5 (43-110)||(39032615-39032683)
[»] chr4 (23 HSPs)
chr4 (40-108)||(29863545-29863614)
chr4 (40-103)||(6093615-6093679)
chr4 (43-104)||(54803339-54803401)
chr4 (43-103)||(31318752-31318813)
chr4 (43-102)||(32901329-32901389)
chr4 (43-102)||(45176746-45176806)
chr4 (40-103)||(51107449-51107513)
chr4 (45-104)||(53662441-53662501)
chr4 (40-102)||(19807426-19807489)
chr4 (45-103)||(20056395-20056454)
chr4 (44-102)||(47105911-47105970)
chr4 (43-104)||(22893867-22893928)
chr4 (43-104)||(22945535-22945596)
chr4 (40-105)||(23094373-23094439)
chr4 (43-104)||(24235318-24235380)
chr4 (43-104)||(29577447-29577509)
chr4 (46-103)||(54801501-54801559)
chr4 (43-112)||(55960690-55960760)
chr4 (43-103)||(4577556-4577617)
chr4 (43-103)||(34537930-34537990)
chr4 (41-105)||(44170628-44170693)
chr4 (40-107)||(9032775-9032843)
chr4 (40-107)||(29694061-29694129)
[»] chr3 (18 HSPs)
chr3 (43-110)||(9557933-9558001)
chr3 (40-109)||(52100254-52100324)
chr3 (43-94)||(1261386-1261438)
chr3 (43-102)||(47141611-47141671)
chr3 (43-108)||(33074868-33074934)
chr3 (43-104)||(50025709-50025771)
chr3 (43-107)||(16267908-16267973)
chr3 (51-103)||(25806547-25806600)
chr3 (43-102)||(48205045-48205105)
chr3 (43-105)||(9159047-9159110)
chr3 (45-102)||(25559704-25559762)
chr3 (43-104)||(32151886-32151948)
chr3 (45-102)||(34208267-34208325)
chr3 (43-103)||(7351649-7351710)
chr3 (45-105)||(46344411-46344472)
chr3 (43-102)||(16295464-16295524)
chr3 (43-102)||(30664503-30664563)
chr3 (40-102)||(42477961-42478024)
[»] chr2 (21 HSPs)
chr2 (43-102)||(13850195-13850255)
chr2 (43-103)||(11152710-11152771)
chr2 (43-101)||(9384376-9384435)
chr2 (43-101)||(34373006-34373065)
chr2 (45-102)||(6328667-6328725)
chr2 (43-104)||(19637227-19637289)
chr2 (43-104)||(19835820-19835882)
chr2 (43-112)||(27307242-27307312)
chr2 (43-103)||(4858112-4858173)
chr2 (49-101)||(37076658-37076711)
chr2 (43-102)||(23048094-23048154)
chr2 (43-106)||(41157012-41157076)
chr2 (45-102)||(25094352-25094410)
chr2 (41-105)||(1298191-1298256)
chr2 (43-103)||(12256900-12256961)
chr2 (43-106)||(36719149-36719214)
chr2 (43-103)||(44484667-44484728)
chr2 (43-102)||(9695072-9695132)
chr2 (43-102)||(11728132-11728192)
chr2 (43-102)||(18749374-18749434)
chr2 (43-102)||(35705928-35705987)
[»] chr1 (26 HSPs)
chr1 (43-105)||(11038259-11038322)
chr1 (43-104)||(21854475-21854537)
chr1 (43-103)||(36794614-36794675)
chr1 (44-104)||(835869-835930)
chr1 (43-103)||(2827721-2827782)
chr1 (43-103)||(22674711-22674772)
chr1 (43-107)||(47113269-47113334)
chr1 (43-102)||(3919300-3919360)
chr1 (43-102)||(40118726-40118786)
chr1 (43-102)||(43105105-43105165)
chr1 (56-102)||(11796317-11796364)
chr1 (43-104)||(1100215-1100277)
chr1 (43-108)||(3291436-3291502)
chr1 (53-102)||(34157806-34157856)
chr1 (43-104)||(36669381-36669443)
chr1 (43-107)||(46281431-46281497)
chr1 (43-103)||(13078842-13078903)
chr1 (43-107)||(18610768-18610833)
chr1 (43-103)||(27563483-27563544)
chr1 (51-103)||(39128409-39128462)
chr1 (45-105)||(44161785-44161846)
chr1 (43-102)||(6396327-6396387)
chr1 (40-103)||(26501294-26501358)
chr1 (45-104)||(26547232-26547292)
chr1 (45-104)||(26585186-26585246)
chr1 (43-102)||(38019515-38019575)
[»] chr8 (21 HSPs)
chr8 (43-100)||(43186298-43186356)
chr8 (40-104)||(28156201-28156266)
chr8 (43-105)||(32674243-32674306)
chr8 (49-102)||(10591890-10591944)
chr8 (44-105)||(33635579-33635641)
chr8 (43-107)||(33817151-33817216)
chr8 (44-104)||(34641543-34641604)
chr8 (43-102)||(14531621-14531681)
chr8 (43-102)||(40459773-40459833)
chr8 (43-105)||(23952491-23952554)
chr8 (43-82)||(44001077-44001116)
chr8 (43-104)||(22836150-22836212)
chr8 (45-98)||(32234465-32234519)
chr8 (43-99)||(14228710-14228767)
chr8 (43-103)||(18549978-18550039)
chr8 (43-103)||(37784385-37784446)
chr8 (43-102)||(5924810-5924870)
chr8 (43-102)||(10344324-10344384)
chr8 (43-102)||(21649179-21649239)
chr8 (57-100)||(44001033-44001077)
chr8 (40-107)||(44711973-44712041)
[»] chr7 (13 HSPs)
chr7 (45-101)||(35212968-35213025)
chr7 (43-102)||(37969931-37969991)
chr7 (43-101)||(17039158-17039217)
chr7 (43-104)||(28548232-28548294)
chr7 (40-121)||(29609872-29609954)
chr7 (43-104)||(33341136-33341198)
chr7 (43-104)||(36108170-36108232)
chr7 (43-103)||(11070227-11070288)
chr7 (43-103)||(38990100-38990161)
chr7 (43-102)||(28081793-28081853)
chr7 (43-102)||(30538626-30538686)
chr7 (43-71)||(38197693-38197721)
chr7 (43-102)||(44175545-44175605)
[»] chr6 (4 HSPs)
chr6 (52-102)||(32746248-32746299)
chr6 (40-70)||(16121185-16121215)
chr6 (41-102)||(32784738-32784800)
chr6 (43-106)||(17417246-17417310)
[»] scaffold0651 (1 HSPs)
scaffold0651 (43-103)||(4857-4918)
[»] scaffold0592 (1 HSPs)
scaffold0592 (43-107)||(905-970)
[»] scaffold0178 (1 HSPs)
scaffold0178 (40-102)||(9776-9840)
[»] scaffold0009 (1 HSPs)
scaffold0009 (45-105)||(5083-5144)
[»] scaffold0522 (1 HSPs)
scaffold0522 (43-102)||(2515-2575)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 31626099 - 31626269
Alignment:
Q  55 aaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttgttaaggagtgttatgtccactttgaccattgtagtttttgaaaaa 153  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31626099 aaagttgtacaaaaattataccaaaatgattgtacaaatatcatttctctttttgttaaggagtgttatgtccactttgaccattgtggtttttgaaaaa 31626198  T
Q  154 tcaataatccaaatcattgactaacatgacatacctcgaattttatttcattccatcatatatgttgagac 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31626199 tcaataatccaaatcattgactaacatgacatacctcgaattttatttcattccatcatatatgttgagac 31626269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 31628836 - 31628920
Alignment:
Q  130 ttgaccattgtagtttttgaaaaatcaataatccaaatcattgactaacatgacatacctcgaattttatttcattccatcatat 214  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||   ||| ||||||| ||||| ||| |||||||||||||    
T  31628836 ttgaccattgtagtttttgaaaaatcaataatcataatctttgactagtctgatatacctccaatttgattccattccatcatat 31628920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 24329993 - 24330055
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| |||||||||||||||||| || || |||||||||| |||||||||||||||||||    
T  24329993 agtatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttctctt 24330055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 6538928 - 6538865
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    ||||||||||||||||||  |||||||||  |||||||||| ||||||||||||||||| ||||    
T  6538928 tatgaaagagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcatttctcatttt 6538865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 20985540 - 20985602
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| ||||||||||||||||||||||||  |||||  || |||||||||||||||||||    
T  20985540 agtatgagagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcatttctctt 20985602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 34693227 - 34693290
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||||| ||||||  ||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  34693227 agtatgagagagaagattgtacaaaaattatacaaaaatgattgtacaaatatcatttctcttt 34693290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 35616806 - 35616869
Alignment:
Q  39 agtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttct 101  Q
    ||||||||||| ||||||||||||| |||| ||||| ||||||| || | ||||||||||||||    
T  35616806 agtaagtatgagagagaaagttgtataaaagttataccaaaatagttgtgcaaatatcatttct 35616869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 3031894 - 3031832
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    |||||||||||||||||||||||||| || ||  |||||  || |||||||||||||||||||    
T  3031894 agtatgaaagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 3031832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 11954492 - 11954422
Alignment:
Q  43 agtatgaaagagaaagttgt-acaaaaattatatcaaaataatt-tacaaatatcatttctctttttgtta 111  Q
    ||||||| |||||||||||| ||||||||||||  | |||| || | ||||||||||||||||||||||||    
T  11954492 agtatgagagagaaagttgtcacaaaaattataaaacaatagttgttcaaatatcatttctctttttgtta 11954422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 4173132 - 4173197
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    |||||||||| ||||||||||||||| || |||||| ||||| ||| |||||||||  ||||||||    
T  4173132 gtaagtatgagagagaaagttgtacataagttatataaaaatgattgtacaaatattttttctctt 4173197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 70
Target Start/End: Complemental strand, 6458830 - 6458801
Alignment:
Q  41 taagtatgaaagagaaagttgtacaaaaat 70  Q
    ||||||||||||||||||||||||||||||    
T  6458830 taagtatgaaagagaaagttgtacaaaaat 6458801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 27005502 - 27005551
Alignment:
Q  55 aaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    |||||||||||||||||||   ||||||||| ||||||||||||||||||    
T  27005502 aaagttgtacaaaaattatcaaaaaataattgtacaaatatcatttctct 27005551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 30103464 - 30103521
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttct 101  Q
    ||||| ||||||| ||||||||||||||||  ||||| ||| ||||||||||||||||    
T  30103464 tatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttct 30103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 41192647 - 41192586
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||||||||  ||||||| || ||||||| || ||||||||||||||||||    
T  41192647 agtatgagagagaaagttgtcaaaaaattgtagcaaaatagttgtacaaatatcatttctct 41192586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 16553564 - 16553504
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| ||||||||||||| |||| || || |||||| ||| |||||||||||||||||    
T  16553564 agtatgagagagaaagttgtaaaaaatttgtagcaaaatgattgtacaaatatcatttctc 16553504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 39032615 - 39032683
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttgtt 110  Q
    ||||||| |||||| ||||||||||| || ||  |||||  || |||||||||||||||||||||||||    
T  39032615 agtatgagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctttttgtt 39032683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 29863614 - 29863545
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttg 108  Q
    ||||||||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||||| ||||    
T  29863614 gtaagtatgaaagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctctatttg 29863545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 6093615 - 6093679
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    |||||||||| ||||||||||||||||||||| ||| |||||  || ||||||||||||||||||    
T  6093615 gtaagtatgagagagaaagttgtacaaaaattgtattaaaatggttctacaaatatcatttctct 6093679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 54803339 - 54803401
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| |||||||||||||||||||||  | ||||||| || |||||||||||||||||||    
T  54803339 agtatgagagagaaagttgtacaaaaattgcaccaaaatagttgtacaaatatcatttctctt 54803401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 31318813 - 31318752
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||||||||||||||||| || ||||||  || ||||||||||||||||||    
T  31318813 agtatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctct 31318752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 32901389 - 32901329
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||||||||||| ||||||||||   |||||| || |||||||||||||||||    
T  32901389 agtatgaaagagaaagttgtgcaaaaattatcaaaaaatagttgtacaaatatcatttctc 32901329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 45176746 - 45176806
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||||||||| |  ||||||| || |||||||||| |||||||||||||||||    
T  45176746 agtatgaaagagaaagttattaaaaaattgtaacaaaataattgtacaaatatcatttctc 45176806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 51107449 - 51107513
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    |||| ||||| |||||||||||| |||||||||||  ||||| ||| ||||||||||||||||||    
T  51107449 gtaaatatgagagagaaagttgtgcaaaaattatacaaaaatgattgtacaaatatcatttctct 51107513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 53662441 - 53662501
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||| ||||||||||||||||||||| |  ||||||| || |||||||||||||||||||    
T  53662441 tatgagagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttctctt 53662501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 19807426 - 19807489
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||| |||||||| | |||||| ||||||| ||||| ||| |||||||||||||||||    
T  19807426 gtaagtatgatagagaaagctatacaaatattatataaaaatgattgtacaaatatcatttctc 19807489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 20056454 - 20056395
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||| |||||||||||| ||||||||||| || |||| || ||||||||||||||||||    
T  20056454 tatgagagagaaagttgtccaaaaattataacataatagttgtacaaatatcatttctct 20056395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 47105970 - 47105911
Alignment:
Q  44 gtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||| |||||||||||||||||| ||||  |||| ||||| |||||||||||||||||    
T  47105970 gtatgagagagaaagttgtacaaaagttatcacaaattaattgtacaaatatcatttctc 47105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 22893928 - 22893867
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||||||||||||||||| ||||||| ||  ||||| ||| |||||||||||||||||||    
T  22893928 agtatgaaagagaaagttgta-aaaaattgtacaaaaatgattgtacaaatatcatttctctt 22893867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 22945596 - 22945535
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||||||||||||||||| ||||||| ||  ||||| ||| |||||||||||||||||||    
T  22945596 agtatgaaagagaaagttgta-aaaaattgtacaaaaatgattgtacaaatatcatttctctt 22945535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 23094439 - 23094373
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    |||| ||||||||||||||||||  |||| ||||  |||||| ||| ||||||||||||||||||||    
T  23094439 gtaaatatgaaagagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcatttctcttt 23094373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 24235380 - 24235318
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| ||||||||||||||||||||| |  |||| | ||| |||||||||||||||||||    
T  24235380 agtatgagagagaaagttgtacaaaaattgtcacaaattgattgtacaaatatcatttctctt 24235318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 29577447 - 29577509
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| | ||||||||||||||||||| ||  |||||| || |||||||||||||||||||    
T  29577447 agtatgagaaagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctctt 29577509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 54801501 - 54801559
Alignment:
Q  46 atgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    |||| ||||||| ||||||||||||||||  ||||| ||| ||||||||||||||||||    
T  54801501 atgagagagaaaattgtacaaaaattataataaaatgattgtacaaatatcatttctct 54801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 55960760 - 55960690
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttgttaa 112  Q
    ||||||| ||||||| |||||||||| ||||| ||||||  || ||||||||||||||||| |||| ||||    
T  55960760 agtatgagagagaaaattgtacaaaagttataccaaaatggttatacaaatatcatttctcatttttttaa 55960690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 4577617 - 4577556
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||||||||||||||||| ||  |||||  || ||||||||||||||||||    
T  4577617 agtatgagagagaaagttgtacaaaaattgtacgaaaatggttgtacaaatatcatttctct 4577556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 34537990 - 34537930
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| |||||||||||||||||| |||||||||| | ||| ||||||||| ||||||||    
T  34537990 agtatgagagagaaagttgtacaaaagttatatcaaattgattgtacaaatat-atttctct 34537930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 44170628 - 44170693
Alignment:
Q  41 taagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||||||  ||||||||||||  |||||||||| ||||||  || ||||||||||||||||||||    
T  44170628 taagtatgtgagagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttctcttt 44170693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 9032843 - 9032775
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    |||||||||| |||||||||||||||||| || |  |||| | ||| ||||||||||||||||| ||||    
T  9032843 gtaagtatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttctcatttt 9032775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 29694061 - 29694129
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataat-ttacaaatatcatttctcttttt 107  Q
    |||||||||||||||||| || |  |||||||||  |||||||||  || |||||||||||||||||||    
T  29694061 gtaagtatgaaagagaaaattatctaaaaattatcacaaaataatagtagaaatatcatttctcttttt 29694129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 9557933 - 9558001
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttgtt 110  Q
    ||||||| ||||||||||||||||||||| |||||||||  || || ||||||||||||||||||||||    
T  9557933 agtatgagagagaaagttgtacaaaaattgtatcaaaattgttgtataaatatcatttctctttttgtt 9558001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 52100324 - 52100254
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttgt 109  Q
    ||||||||||||||||||||||||||||||||||   |||||  || ||||||||||||||||| ||||||    
T  52100324 gtaagtatgaaagagaaagttgtacaaaaattattaaaaaatggttgtacaaatatcatttctcattttgt 52100254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 1261386 - 1261438
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatat 94  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  1261386 agtatgaaagagaaagttgtacaaaaattgtatcaaaatagttgtacaaatat 1261438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 47141611 - 47141671
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||||||||||||||| ||||||  || |||||||||||||||||    
T  47141611 agtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 47141671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 33074934 - 33074868
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttg 108  Q
    ||||||| ||| |||||||||||||||||||| |||||| ||| |||||||||| ||||||| ||||    
T  33074934 agtatgagagaaaaagttgtacaaaaattataccaaaattattgtacaaatatcctttctctatttg 33074868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 50025709 - 50025771
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| |||||||||||||||||| ||||| ||||||  || |||||||||||||||||||    
T  50025709 agtatgagagagaaagttgtacaaaatttataccaaaatggttgtacaaatatcatttctctt 50025771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 16267908 - 16267973
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    ||||||| |||||||||||| ||||||||||   ||||| ||| ||||||||||||||||||||||    
T  16267908 agtatgagagagaaagttgttcaaaaattattagaaaatgattatacaaatatcatttctcttttt 16267973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 25806547 - 25806600
Alignment:
Q  51 agagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||    
T  25806547 agagaaagttgtataaaagttataccaaaataattatacaaatatcatttctct 25806600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 48205105 - 48205045
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| ||||||| ||||||||||||||||  ||||| ||| |||||||||||||||||    
T  48205105 agtatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 48205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 9159047 - 9159110
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||||||||||||| ||||||||||||| ||  |||||  || ||||||||||||||||||||    
T  9159047 agtatgaaagagaaaattgtacaaaaattgtacaaaaatggttgtacaaatatcatttctcttt 9159110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 25559762 - 25559704
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||| ||||||||||||| |||||||||| ||||||  || |||||||||||||||||    
T  25559762 tatgagagagaaagttgtataaaaattataccaaaatggttgtacaaatatcatttctc 25559704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 32151948 - 32151886
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| |||||| ||| |||||||||||||  ||||||||| |||| ||||||||||||||    
T  32151948 agtatgagagagaaggttatacaaaaattatacaaaaataattgtacacatatcatttctctt 32151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 34208325 - 34208267
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||||||||| || || |||| || ||||||||||||| |||||||||||||||||    
T  34208325 tatgaaagagaaaattatataaaagttgtatcaaaataattgtacaaatatcatttctc 34208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 7351649 - 7351710
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||| ||||||||||||||||  |||||  || ||||||||||||||||||    
T  7351649 agtatgagagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttctct 7351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 46344472 - 46344411
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||| ||||||| ||||||||||||| || |||| || || ||||||||||||||||||||    
T  46344472 tatgagagagaaaattgtacaaaaattgtaacaaattagttgtacaaatatcatttctcttt 46344411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 16295524 - 16295464
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||||||||| || ||||||| |  || |||||||||||||||||    
T  16295524 agtatgagagagaaagttgtacaaaagttgtatcaaattggttgtacaaatatcatttctc 16295464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 30664563 - 30664503
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||||||||| || ||  ||||| ||| |||||||||||||||||    
T  30664563 agtatgagagagaaagttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctc 30664503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 42478024 - 42477961
Alignment:
Q  40 gtaagtatgaaagagaaagttgt-acaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||| |||||||||| ||||||||||||  ||||||||| | |||||||||||||||    
T  42478024 gtaagtatgaaatagaaagttgtcacaaaaattata-aaaaataattgttcaaatatcatttctc 42477961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 13850195 - 13850255
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  13850195 agtatgagagagaaagttgtacaaaaattatatcaaaatgattgtataaatatcatttctc 13850255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 11152710 - 11152771
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| |||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  11152710 agtatgagagagaaggttgtacaaaaattatataaaaatgattgtacaaatatcatttctct 11152771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 9384435 - 9384376
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttct 101  Q
    ||||||| ||||||||||||||||||||||| | |||||| || ||||||||||||||||    
T  9384435 agtatgagagagaaagttgtacaaaaattatgtaaaaatagttgtacaaatatcatttct 9384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 34373065 - 34373006
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttct 101  Q
    ||||||| |||||||||||||||||||||||| ||||||  || ||||||||||||||||    
T  34373065 agtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct 34373006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 6328725 - 6328667
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||| |||||||||||||||||||||||| ||||||  || |||||||||||||||||    
T  6328725 tatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 6328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 19637289 - 19637227
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    |||||||||||||||||||||||||| |||||  |||||  || |||||||||||||||||||    
T  19637289 agtatgaaagagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctctt 19637227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 19835882 - 19835820
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    |||||||||||||||||||||||||| |||||  |||||  || |||||||||||||||||||    
T  19835882 agtatgaaagagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctctt 19835820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 27307242 - 27307312
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttgttaa 112  Q
    ||||||| |||||||||||||||||| || |  |||| | ||| |||||||||||||||||||||||||||    
T  27307242 agtatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttctctttttgttaa 27307312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 4858173 - 4858112
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| |||||||||| ||||||||||||| ||||||| || |||| |||||||||||||    
T  4858173 agtatgacagagaaagttatacaaaaattataccaaaatagttatacagatatcatttctct 4858112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 37076711 - 37076658
Alignment:
Q  49 aaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttct 101  Q
    ||||||||| || |||||||||||||| ||||||||| ||||||||||||||||    
T  37076711 aaagagaaaattatacaaaaattatataaaaataattgtacaaatatcatttct 37076658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 23048094 - 23048154
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||| |||||||||||| ||||| | ||| |||||||||||||||||    
T  23048094 agtatgagagagaaagttatacaaaaattatctcaaattgattgtacaaatatcatttctc 23048154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 41157012 - 41157076
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttt 106  Q
    ||||||| ||||||||||||||||| ||||||  ||||| ||| |||||||||||||| ||||||    
T  41157012 agtatgagagagaaagttgtacaaatattatacaaaaatgattatacaaatatcatttttctttt 41157076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 25094410 - 25094352
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||| ||||||||||||||||||||| || ||||||  || |||||||||||||||||    
T  25094410 tatgagagagaaagttgtacaaaaattgtaccaaaatggttatacaaatatcatttctc 25094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 1298256 - 1298191
Alignment:
Q  41 taagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||||||| ||||||| ||||  |||||||||| ||||||  || ||||||||||||||||||||    
T  1298256 taagtatgagagagaaaattgtcaaaaaattatagcaaaatggttctacaaatatcatttctcttt 1298191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 12256961 - 12256900
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| |||||| ||||||||||| |||||  ||||| ||| ||||||||||||||||||    
T  12256961 agtatgagagagaaggttgtacaaaagttatacaaaaatgattgtacaaatatcatttctct 12256900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 36719214 - 36719149
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaa-tatcatttctctttt 106  Q
    ||||||| |||||||||||| ||||| ||||| ||||||| || |||||| |||||||||||||||    
T  36719214 agtatgagagagaaagttgttcaaaatttataccaaaatagttgtacaaagtatcatttctctttt 36719149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 44484667 - 44484728
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||||||||||||||||| |  ||||||  || ||||||||||||||||||    
T  44484667 agtatgagagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttctct 44484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 9695072 - 9695132
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||| |||||||||| ||| |||  || |||||||||||||||||    
T  9695072 agtatgagagagaaagttgtccaaaaattatctcataatggttgtacaaatatcatttctc 9695132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11728132 - 11728192
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||||||||||||||||| || || ||||||  || |||||| ||||||||||    
T  11728132 agtatgaaagagaaagttgtacaaaagttgtaccaaaatggttgtacaaacatcatttctc 11728192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 18749374 - 18749434
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||| |||||||||||||||||  |||||  || |||||||||||||||||    
T  18749374 agtatgagagagaaggttgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 18749434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 35705928 - 35705987
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||||||||||||||||| ||||||||||  |||||  || |||||||||||||||||    
T  35705928 agtatgaaagagaaagttgta-aaaaattatacaaaaatggttgtacaaatatcatttctc 35705987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 11038322 - 11038259
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    |||||||||||||||||||||||||||||||| ||||||  || || |||||||||||||||||    
T  11038322 agtatgaaagagaaagttgtacaaaaattataccaaaatggttgtataaatatcatttctcttt 11038259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 21854475 - 21854537
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| |||||||||||||||||| || || |||||||||| |||||||||||||||||||    
T  21854475 agtatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttctctt 21854537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 36794675 - 36794614
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||||||||||| || | ||||||||||| |||||||||| ||||||||||||||||||    
T  36794675 agtatgaaagagaaatttatccaaaaattataccaaaataattgtacaaatatcatttctct 36794614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 835930 - 835869
Alignment:
Q  44 gtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    |||||| ||||||||||||||||||||| || |||||| ||| |||||||||||||| ||||    
T  835930 gtatgagagagaaagttgtacaaaaattgtaacaaaatgattgtacaaatatcatttatctt 835869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 2827721 - 2827782
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| |||||||||||||||||||||||| | || | ||| ||||||||||||||||||    
T  2827721 agtatgagagagaaagttgtacaaaaattataccgaattgattgtacaaatatcatttctct 2827782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 22674772 - 22674711
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||||||||||||||||| ||  |||||| || ||||||||||||||||||    
T  22674772 agtatgagagagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctct 22674711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 47113334 - 47113269
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    ||||||| |||||||||||| ||||||||||  |||||| ||| |||||||||||||| |||||||    
T  47113334 agtatgagagagaaagttgtccaaaaattattgcaaaatgattgtacaaatatcatttatcttttt 47113269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 3919360 - 3919300
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||| ||||||||||| ||||||  || |||||||||||||||||    
T  3919360 agtatgagagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttctc 3919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 40118726 - 40118786
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| ||||||| ||||||||||||||||  ||||| ||| |||||||||||||||||    
T  40118726 agtatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 40118786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 43105165 - 43105105
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| ||||||| ||||| ||||||||||  ||||||||| |||||||||||||||||    
T  43105165 agtatgagagagaaaattgtataaaaattatacaaaaataattgtacaaatatcatttctc 43105105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 11796364 - 11796317
Alignment:
Q  56 aagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  11796364 aagttgtacaaaaattataccaaattaattgtacaaatatcatttctc 11796317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 1100277 - 1100215
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| ||||||||||||||||||||| ||  |||||  || |||||||||||||||||||    
T  1100277 agtatgatagagaaagttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 1100215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 3291436 - 3291502
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttg 108  Q
    ||||||||||||||| |||||||||| || || |||| ||||| ||| |||||||||||||| ||||    
T  3291436 agtatgaaagagaaaattgtacaaaagttgtaacaaattaattgtacgaatatcatttctctatttg 3291502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 34157856 - 34157806
Alignment:
Q  53 agaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  34157856 agaaagttgtccaaaaattatcacaaaataattatacaaatatcatttctc 34157806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 36669381 - 36669443
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| ||| |||||||||||||||||||  |||| | ||| |||||||||||||||||||    
T  36669381 agtatgagagaaaaagttgtacaaaaattatcacaaattgattgtacaaatatcatttctctt 36669443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 46281497 - 46281431
Alignment:
Q  43 agtatgaaagagaaagttgt-acaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    ||||||| |||||||||||| |||||||||||  ||||||| || ||||||||||||||||| ||||    
T  46281497 agtatgagagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttctcatttt 46281431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 13078903 - 13078842
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||||||||| | |||| |||||||| ||||||||| ||| || |||||||||||||||    
T  13078903 agtatgaaagagagacttgttcaaaaattgtatcaaaatgattgtataaatatcatttctct 13078842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 18610833 - 18610768
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    ||||||| ||||||||||||| |||| || |  ||||||| || ||||||||||||||||||||||    
T  18610833 agtatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctcttttt 18610768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 27563544 - 27563483
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||| ||||  |||||||||| |||||| ||| ||||||||||||||||||    
T  27563544 agtatgagagagaaaattgtcaaaaaattatagcaaaatgattgtacaaatatcatttctct 27563483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 39128462 - 39128409
Alignment:
Q  51 agagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    |||||||||||| ||||||||||  |||||||||| ||||||||| ||||||||    
T  39128462 agagaaagttgtccaaaaattattgcaaaataattgtacaaatataatttctct 39128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 44161785 - 44161846
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||| ||||||| |||| ||||||||||| ||||||| || |||||||||||||| |||||    
T  44161785 tatgagagagaaaattgtccaaaaattataccaaaatagttatacaaatatcatttatcttt 44161846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 6396387 - 6396327
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||||||||||||||||| || || ||||||  || ||| |||||||||||||    
T  6396387 agtatgaaagagaaagttgtacaaaagttgtaccaaaatggttgtaccaatatcatttctc 6396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 26501358 - 26501294
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    |||||||||| |||||||||||| ||||| ||||  ||||||  || ||||||||||||||||||    
T  26501358 gtaagtatgagagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttctct 26501294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 26547292 - 26547232
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaata-atttacaaatatcatttctctt 104  Q
    ||||| |||||||||||| |||||||| |  ||||||| || |||||||||||||||||||    
T  26547292 tatgagagagaaagttgttcaaaaattgtcacaaaatatatgtacaaatatcatttctctt 26547232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 26585186 - 26585246
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||| ||| |||||||||||||| ||||  ||||||| || |||||||||||||||||||    
T  26585186 tatgagagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttctctt 26585246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 38019515 - 38019575
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||| |||||||||||  |||| ||||  |||||||||| |||||||||||||||||    
T  38019515 agtatgaaggagaaagttgtctaaaagttatcacaaaataattatacaaatatcatttctc 38019575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 43186356 - 43186298
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttc 100  Q
    ||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  43186356 agtatgagagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 28156266 - 28156201
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    |||||||||| ||||||||||||||||||||| || ||||||  || |||||||||||||||||||    
T  28156266 gtaagtatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctctt 28156201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 32674243 - 32674306
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||||| |||||||||||||||||| ||||| ||||||  || ||||||||||||||||||||    
T  32674243 agtatgagagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctcttt 32674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 10591890 - 10591944
Alignment:
Q  49 aaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||||||||||| |||||| |||||| || |||||||||||||||||    
T  10591890 aaagagaaagttgtacaaaagttatataaaaatagttgtacaaatatcatttctc 10591944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 33635641 - 33635579
Alignment:
Q  44 gtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    |||||||||||||||||||||||| |||||| |||| || || || |||||||||||||||||    
T  33635641 gtatgaaagagaaagttgtacaaagattataccaaattagttgtataaatatcatttctcttt 33635579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 33817216 - 33817151
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    ||||||||| ||||||||||||||||||| |  |||| | ||| ||||||||||||||||||||||    
T  33817216 agtatgaaaaagaaagttgtacaaaaattgttacaaattgattgtacaaatatcatttctcttttt 33817151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 34641604 - 34641543
Alignment:
Q  44 gtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    |||||| ||||||||||| ||||||||||||| |||||  || |||||||||||||||||||    
T  34641604 gtatgagagagaaagttgcacaaaaattatataaaaatggttgtacaaatatcatttctctt 34641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 14531681 - 14531621
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||||||||||||||||| ||||   |||||| || |||||||||||||||||    
T  14531681 agtatgaaagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatttctc 14531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 40459773 - 40459833
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||||||||| ||||| ||||||| || ||||||| |||||||||    
T  40459773 agtatgagagagaaagttgtacaaaagttataccaaaatagttgtacaaatttcatttctc 40459833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 23952554 - 23952491
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||||||| ||||| |||||||||| | ||  |||||||||| ||||||||||||||||||||    
T  23952554 agtatgaaaaagaaaattgtacaaaagtcatcacaaaataattgtacaaatatcatttctcttt 23952491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 44001116 - 44001077
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaata 82  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  44001116 agtatgagagagaaagttgtacaaaaattgtatcaaaata 44001077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 22836150 - 22836212
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| |||||||||||||||||| || ||| |||||  || |||||||||||||||||||    
T  22836150 agtatgagagagaaagttgtacaaaatttgtatgaaaatggttgtacaaatatcatttctctt 22836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 32234465 - 32234519
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatt 98  Q
    ||||||||||||| ||||| ||||||||||| |||||| || |||||||||||||    
T  32234465 tatgaaagagaaaattgtataaaaattatataaaaatagttgtacaaatatcatt 32234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 14228767 - 14228710
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcattt 99  Q
    ||||||| |||||||||||||||||| ||||  ||||||| || ||||||||||||||    
T  14228767 agtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 14228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 18550039 - 18549978
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| |||||| ||||||||||| |||||  ||||| ||| ||||||||||||||||||    
T  18550039 agtatgagagagaatgttgtacaaaagttatacaaaaatgattgtacaaatatcatttctct 18549978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 37784385 - 37784446
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||| |||||||||| ||||| ||||||  || ||||||||||||||||||    
T  37784385 agtatgagagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttctct 37784446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 5924870 - 5924810
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaata-atttacaaatatcatttctc 102  Q
    ||||||| |||||||||||||||||||||||   |||||| || ||| |||||||||||||    
T  5924870 agtatgagagagaaagttgtacaaaaattattataaaatagatgtacgaatatcatttctc 5924810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 10344384 - 10344324
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaata-atttacaaatatcatttctc 102  Q
    ||||||| |||||||||||| ||||||||||   |||||| || |||||||||||||||||    
T  10344384 agtatgagagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctc 10344324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 21649179 - 21649239
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||||||||||||||||| || ||  |||||  || |||||||||||||||||    
T  21649179 agtatgaaagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 21649239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 44001077 - 44001033
Alignment:
Q  57 agttgtacaaaaattatatcaaaataatt-tacaaatatcatttc 100  Q
    ||||||||||||||| |||||||||| || |||||||||||||||    
T  44001077 agttgtacaaaaattgtatcaaaatagttgtacaaatatcatttc 44001033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 44712041 - 44711973
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    |||||||||| ||||||| ||||  |||||||||  |||| ||||| || |||||||||||||||||||    
T  44712041 gtaagtatgagagagaaaattgtcaaaaaattattacaaattaattgtataaatatcatttctcttttt 44711973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 35212968 - 35213025
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttct 101  Q
    ||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  35212968 tatgagagagaaagttgtacaaaaattgtagcaaaataattgtacaaatatcatttct 35213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 37969991 - 37969931
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||||||||| || |||||||||| || |||||||||||||||||    
T  37969991 agtatgagagagaaagttgtacaaaagttgtatcaaaatagttgtacaaatatcatttctc 37969931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 17039217 - 17039158
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttct 101  Q
    ||||||| ||||||||||||||||||||||||  |||||| || ||||||||||||||||    
T  17039217 agtatgagagagaaagttgtacaaaaattatacaaaaatagttgtacaaatatcatttct 17039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 28548232 - 28548294
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| |||||||||||||||||| || || ||||||| || |||||||||||||||||||    
T  28548232 agtatgagagagaaagttgtacaaaagttgtaccaaaatagttgtacaaatatcatttctctt 28548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 29609872 - 29609954
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttttgttaaggagtgtta 121  Q
    |||||||||| ||||||||||||  |||| || ||  |||||| || ||||||||| ||||||||| || |||||||||||||    
T  29609872 gtaagtatgagagagaaagttgtcaaaaagttgtagtaaaatagttgtacaaatatgatttctcttattattaaggagtgtta 29609954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 33341136 - 33341198
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||||||||||| |||||||||| |||||  |||||  || |||||||||||||||||||    
T  33341136 agtatgaaagagaaaattgtacaaaagttatactaaaattgttgtacaaatatcatttctctt 33341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 36108232 - 36108170
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctt 104  Q
    ||||||| |||||||||| || ||||||| |||||||||  || |||||||||||||||||||    
T  36108232 agtatgagagagaaagttataaaaaaattgtatcaaaatggttgtacaaatatcatttctctt 36108170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 11070288 - 11070227
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| |||||||||||||||||| |||||  |||||  || ||||||||||||||||||    
T  11070288 agtatgatagagaaagttgtacaaaagttatactaaaatggttgtacaaatatcatttctct 11070227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 38990161 - 38990100
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||||||| |||||||| ||||||||||   ||||||||| |||| |||||||||||||    
T  38990161 agtatgaaagaaaaagttgtccaaaaattatgaaaaaataattatacatatatcatttctct 38990100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 28081793 - 28081853
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| ||||||||||||| |||||||||  ||||||  || |||||||||||||||||    
T  28081793 agtatgagagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttctc 28081853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 30538686 - 30538626
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||||||||| || || ||||||  || |||||||||||||||||    
T  30538686 agtatgagagagaaagttgtacaaaagttgtaccaaaattgttgtacaaatatcatttctc 30538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 38197721 - 38197693
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaatt 71  Q
    |||||||||||||||||||||||||||||    
T  38197721 agtatgaaagagaaagttgtacaaaaatt 38197693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 44175605 - 44175545
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||| |||||||||||||||||| ||||  |||||| ||| ||||||||| |||||||    
T  44175605 agtatgagagagaaagttgtacaaaagttatcacaaaatgattgtacaaatattatttctc 44175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 32746248 - 32746299
Alignment:
Q  52 gagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  32746248 gagaaagttgtacaaaaattatatcaaattgattatacaaatatcatttctc 32746299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 70
Target Start/End: Complemental strand, 16121215 - 16121185
Alignment:
Q  40 gtaagtatgaaagagaaagttgtacaaaaat 70  Q
    |||||||||||||||||||||||||||||||    
T  16121215 gtaagtatgaaagagaaagttgtacaaaaat 16121185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 32784800 - 32784738
Alignment:
Q  41 taagtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||||||||| ||||||||  |||| || || |||||||||| |||||||||||||||||    
T  32784800 taagtatgaaagaaaaagttgtcaaaaagttgtaacaaaataattgtacaaatatcatttctc 32784738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 17417246 - 17417310
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctctttt 106  Q
    ||||||| |||||||||||| |||||||| |  || ||| ||| |||||||||||||||||||||    
T  17417246 agtatgagagagaaagttgtccaaaaattgtcacataatgattgtacaaatatcatttctctttt 17417310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 4857 - 4918
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctct 103  Q
    ||||||| ||||||||||||||||||||| || ||||||  || ||||||||||||||||||    
T  4857 agtatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctct 4918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 970 - 905
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttttt 107  Q
    ||||||| ||||||| || |||||||||||||||||| |  || ||||||||||||||||||||||    
T  970 agtatgagagagaaaattatacaaaaattatatcaaattggttgtacaaatatcatttctcttttt 905  T

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Target: scaffold0178 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 9840 - 9776
Alignment:
Q  40 gtaagtatgaaagagaaagttgt-acaaaaattatatcaaaataatt-tacaaatatcatttctc 102  Q
    ||||||||||||||||||||||| ||||||||||||  |||||  || |||||||||||||||||    
T  9840 gtaagtatgaaagagaaagttgtcacaaaaattataaaaaaatggttgtacaaatatcatttctc 9776  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 5083 - 5144
Alignment:
Q  45 tatgaaagagaaagttgtacaaaaattatatcaaaataatt-tacaaatatcatttctcttt 105  Q
    ||||| ||||||||||||||||||||| ||| |||||  || || |||||||||||||||||    
T  5083 tatgagagagaaagttgtacaaaaattctataaaaatggttatataaatatcatttctcttt 5144  T

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Target: scaffold0522 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 2515 - 2575
Alignment:
Q  43 agtatgaaagagaaagttgtacaaaaattatatcaaaata-atttacaaatatcatttctc 102  Q
    ||||||| |||||||||||| ||||||||||  || |||| || |||||||||||||||||    
T  2515 agtatgagagagaaagttgtccaaaaattatcacataatagatgtacaaatatcatttctc 2575  T

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