View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1435_high_116 (Length: 238)
Name: NF1435_high_116
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1435_high_116 |
 | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0054 (1 HSPs) |
| | |
|
| [»] scaffold0654 (1 HSPs) |
| | |
|
| [»] scaffold0051 (1 HSPs) |
| | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
| [»] scaffold0308 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 29)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 31000245 - 31000462
Alignment:
| Q |
4 |
atcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgtttt |
103 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31000245 |
atcatcatggctaatacatttttagcttctttcaccctaccatccttacaaaaaccatcaaccagtatattaaaggtatacacatccgggttgatgtttt |
31000344 |
T |
|
| Q |
104 |
ccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31000345 |
ccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagcagaaaaaccactaattaaagcattgtaagtgaaaacatcaaggccaat |
31000444 |
T |
|
| Q |
204 |
tctcttagcaaccatttc |
221 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
31000445 |
tctcttagcaaccatttc |
31000462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 24890595 - 24890769
Alignment:
| Q |
46 |
tccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatt |
145 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
24890595 |
tccttacaaaagccatcaaccagtatattaaaggtatacacatttgggttgatgttttcctttttcattttattgaacaaatcaattgcatagttcaatt |
24890694 |
T |
|
| Q |
146 |
tagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccattt |
220 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24890695 |
tagaaacagcggaaaaaccactaattaaagcattgtaagtgaaaacatcagggcaaattctcttagcaaccattt |
24890769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24886825 - 24887045
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| | ||| |||| |||| |||||||||||||||| ||||| |||||| |||||||| |||||||||||| ||||||||||||||||| | |
|
|
| T |
24886825 |
ttcatcatcatagataacacatatttagcttctttcaccctaccttccttacaaaaagcatcaaccgatatattaaaggtatacacatccgggttgatat |
24886924 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||||||||| |||| || ||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
24886925 |
tttccgctgtcattttattgaacaacccaattgtatcattcaatttaccaacaatgcaaaaaccactaattaaagcactgtaagtgataacatcaggaga |
24887024 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||| || |||||||| |
|
|
| T |
24887025 |
aattctcttcgcgaccatttc |
24887045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24272251 - 24272471
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||||||||||| || ||||| ||||| ||||||||| ||||||||| || |||||||| |||||||||| |
|
|
| T |
24272251 |
ttcatcatcatagctaacccatttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgt |
24272350 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| ||||||||| |||| || ||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
24272351 |
tttccgatgtcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaaaccattaattaaagcattataagtgttaacatcagggaa |
24272450 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
24272451 |
aattctcttagaaaccatttc |
24272471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29834910 - 29834690
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||| | || ||||| ||||| ||||||||| |||||||||||| |||| ||| |||||||||| |
|
|
| T |
29834910 |
ttcatcatcatagctaacacatttttagcttctttcatttttccttccttacaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgt |
29834811 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
29834810 |
tttccaatgtcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaagccactaatcaaagcattgtaagtgaaaacatcagggga |
29834711 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
29834710 |
aattctcttagaaaccatttc |
29834690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29866344 - 29866124
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||| | || ||||| ||||| ||||||||| |||||||||||| |||| ||| |||||||||| |
|
|
| T |
29866344 |
ttcatcatcatagctaacacatttttagcttctttcatttttccttccttacaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgt |
29866245 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
29866244 |
tttccaatgtcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaagccactaatcaaagcattgtaagtgaaaacatcagggga |
29866145 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
29866144 |
aattctcttagaaaccatttc |
29866124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 29348902 - 29349095
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||||| || ||||| ||||| |||||||||| |||| ||||||| |||||||| |||||||| | |
|
|
| T |
29348902 |
ttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacatcagggttgattt |
29349001 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatc |
194 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
29349002 |
cttccgatatcattttattgaacaaaccaattgcatcattcaatttaccaagaatgcaaaaaccactaattaaagcactgtaagtaacaacatc |
29349095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 24264056 - 24264242
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||||||||||| || ||||| ||||| ||||||||| ||||||||| || |||||||| |||||||||| |
|
|
| T |
24264056 |
ttcatcatcatagctaacccatttttagcttctttcacccttccttccttacaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgt |
24264155 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtga |
187 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| ||||||||| |||| || ||| ||||||||||||||| | ||||||| |
|
|
| T |
24264156 |
tttccgatgtcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaagccactaattaaagcactataagtga |
24264242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29882130 - 29881910
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||||| || ||||| ||||| |||||||||| |||| ||||||| ||||||| ||| ||||||| |
|
|
| T |
29882130 |
ttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacattcggattgatgt |
29882031 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||||| | |||||||||| |||||| |||||||||| ||||||||| |||| || ||| ||||||||||||||| | ||||||| ||||| ||| |
|
|
| T |
29882030 |
tttccaatatcattttattaaacaaatcaattgcatctttcaatttaccaacaatgcaaaatccactaattaaagcactataagtgacaacattaggaga |
29881931 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||| ||| ||||||| |
|
|
| T |
29881930 |
aattctctttgcagccatttc |
29881910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29909286 - 29909066
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||||| || ||||| ||||| |||||||||| |||| ||||||| ||||||| ||| ||||||| |
|
|
| T |
29909286 |
ttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacacattcggattgatgt |
29909187 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||||| | |||||||||| |||||| |||||||||| ||||||||| |||| || ||| ||||||||||||||| | ||||||| ||||| ||| |
|
|
| T |
29909186 |
tttccaatatcattttattaaacaaatcaattgcatctttcaatttaccaacaatgcaaaatccactaattaaagcactataagtgacaacattaggaga |
29909087 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||| ||| ||||||| |
|
|
| T |
29909086 |
aattctctttgcagccatttc |
29909066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29886992 - 29886772
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| | ||||| || | || ||||| ||||| ||||||||| ||||||||| || |||||| |||||||||| |
|
|
| T |
29886992 |
ttcatcatcatagctaacacatttttagcctcttttacgtttccttccttacaaaatgcatcaaccaatatattaaaagtatacacagttgggttgatgt |
29886893 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||| || ||||||||||||||| ||| || ||||||| ||||||||| |||| || ||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
29886892 |
ttttcgatgtcattttattgaataaatcagttgcatctttcaatttaccaacaatgcaaaagccactaattaaagcattgtaagtgaaaacatcggggaa |
29886793 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||||| | ||||||| |
|
|
| T |
29886792 |
aattctcttagaagccatttc |
29886772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29897772 - 29897557
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| || || ||||||||| ||||||||||||| ||||| ||||| |||||||||| |||| ||||||| |||||||||||| |||||| |
|
|
| T |
29897772 |
ttcatcatcatagcaaacacatttttagcttctttcaccct----tccttacaaaatccatcaacca-tatactaaaggtatacacatccgggatgatgt |
29897678 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||| | | |||||||||||||||||||||||||||| ||||||||| |||| || ||| ||| ||||||||||| ||||||| | |||| | || |
|
|
| T |
29897677 |
ttttcaatatcattttattgaacaaaccaattgcatctttcaatttaccaacaatgcaaaagccaataattaaagcactgtaagtaacaacaccgggata |
29897578 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
29897577 |
aattctctttgcaaccatttc |
29897557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29928968 - 29928748
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||||| || ||||| ||||| |||||||||| |||| ||||||| |||| || ||| |||||| |
|
|
| T |
29928968 |
ttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccaatatactaaaggtatacaaatacggaatgatgt |
29928869 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||| | | |||||||||| || ||| ||| |||||| ||||||||| |||| || ||| ||||||||||||||| | ||||||| ||||| ||| |
|
|
| T |
29928868 |
tttacaatatcattttattaaaaaaatcaaatgcatctttcaatttaccaacaatgcaaaatccactaattaaagcactataagtgacaacattaggaga |
29928769 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
29928768 |
aattctctttgcaaccatttc |
29928748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 24711743 - 24711613
Alignment:
| Q |
91 |
gggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaa |
190 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| | ||||||||||||||||||| |||| || || |||||||||||||||| | ||||||| || |
|
|
| T |
24711743 |
gggttgatgttgtctgctgtcattttattgaacaaccaaattgcatcattcaatttaccaacaatgcaaacaccactaattaaagcactataagtgacaa |
24711644 |
T |
|
| Q |
191 |
catcagggccaattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||| ||||||||||||| ||||||| |
|
|
| T |
24711643 |
catcagggcaaattctcttagcagccatttc |
24711613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 29073458 - 29073262
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| || || ||| ||||| ||||||||| | | || ||||| ||||| |||||||||| ||||||||| || ||||||||||| ||||||| |
|
|
| T |
29073458 |
ttcatcatcatagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgt |
29073359 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagg |
197 |
Q |
| |
|
||||| | |||||||||| |||| | |||||||||| |||| |||| |||| || ||| ||||||||||||||| ||||||| | ||||||||| |
|
|
| T |
29073358 |
tttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcactgtaagtaacaacatcagg |
29073262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 29106031 - 29105835
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| || || ||| ||||| ||||||||| | | || ||||| ||||| |||||||||| ||||||||| || ||||||||||| ||||||| |
|
|
| T |
29106031 |
ttcatcatcatagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgt |
29105932 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagg |
197 |
Q |
| |
|
||||| | |||||||||| |||| | |||||||||| |||| |||| |||| || ||| ||||||||||||||| ||||||| | ||||||||| |
|
|
| T |
29105931 |
tttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaacccactaattaaagcactgtaagtaacaacatcagg |
29105835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 29902951 - 29902759
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||||| || ||||| |||||||||||||||| |||| |||| || ||||||| |||||||||| |
|
|
| T |
29902951 |
ttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaaaccatcaaccaatatagtaaaagtatacacatttgggttgatgt |
29902852 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacat |
193 |
Q |
| |
|
|||| | |||||||||| || ||| |||||||||| ||| |||| |||| || ||| ||||||||||||||| | ||||||| ||||| |
|
|
| T |
29902851 |
tttcgaatatcattttattaaagaaatcaattgcatctctcagtttaccaacaatgcaaaatccactaattaaagcactataagtgacaacat |
29902759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 29358284 - 29358429
Alignment:
| Q |
2 |
tcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgtt |
101 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||||||||||||| || ||||| ||||| |||||||| | |||| ||||||| |||||||||||||||||||| |
|
|
| T |
29358284 |
tcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaactaatatagtaaaggtatacacatccgggttgatgtt |
29358383 |
T |
|
| Q |
102 |
ttccgctgtcattttattgaacaaaccaattgcatcattcaattta |
147 |
Q |
| |
|
|||| | |||||||||| |||| | ||| |||||| |||| |||| |
|
|
| T |
29358384 |
ttccaatatcattttattaaacagatcaactgcatctttcagttta |
29358429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 29894248 - 29894064
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| || || ||| ||||| ||||||||| | | || ||||| ||||| |||||||||| ||||||||| || ||||||||||| ||||||| |
|
|
| T |
29894248 |
ttcatcatcatagcaaacacagttttaccttctttcatctttccgtccttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgt |
29894149 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagt |
185 |
Q |
| |
|
||||| | |||||||||| |||| | |||||||||| |||| || | ||||||| ||| ||||||||||||||| ||||||| |
|
|
| T |
29894148 |
tttccaatatcattttattaaacagatcaattgcatctttcagttgaccaacagtgaaaaacccactaattaaagcactgtaagt |
29894064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 29889215 - 29889069
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||||| || ||||| ||||| |||||||||| ||| |||||||| ||||||| ||| ||||||| |
|
|
| T |
29889215 |
ttcatcatcatagctaacacatttttagcttctttcacccttccttccttacaaaatccatcaaccattatgttaaaggtatacacattcggattgatgt |
29889116 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaattta |
147 |
Q |
| |
|
||||| | |||||||||| || || |||||||||| |||| |||| |
|
|
| T |
29889115 |
tttccaatatcattttattaaaacaatcaattgcatctttcatttta |
29889069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 29905252 - 29905129
Alignment:
| Q |
97 |
atgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcag |
196 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||| ||||||||| |||| || ||| |||||||||||||||||||||||| || ||||| |
|
|
| T |
29905252 |
atgttttccaatgtcattttattgaaaaaaccaattgcatctttcaatttaccaacaatgcaaaagtcactaattaaagcattgtaagtgagaatatcag |
29905153 |
T |
|
| Q |
197 |
ggccaattctcttagcaaccattt |
220 |
Q |
| |
|
|| ||||||||||| |||||||| |
|
|
| T |
29905152 |
gggaaattctcttagaaaccattt |
29905129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 29115956 - 29115763
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| | || ||| ||||| ||||||||| | | || ||||| ||||| ||| ||||| ||||||||| || ||||||||||| ||||||| |
|
|
| T |
29115956 |
ttcatcatcatatcaaacacagttttaccttctttcatctttccgtccttacaaaatgcattaaccaatatattaaaagtatacacatccggtttgatgt |
29115857 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatc |
194 |
Q |
| |
|
||||| | |||||||||| |||| | ||||||||||||||| |||| || | || ||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
29115856 |
tttccaatatcattttattaaacagatcaattgcatcattcagtttaccaagaatgcaaaaaccactaattaaagcactgtaagtaacaacatc |
29115763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 29211433 - 29211566
Alignment:
| Q |
52 |
caaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaa |
151 |
Q |
| |
|
|||||| ||||||||| ||||||||| || ||||||||||| ||||||||||||| | |||||||||| |||| | ||| |||||| |||| |||| || |
|
|
| T |
29211433 |
caaaaaacatcaaccaatatattaaaagtatacacatccggtttgatgttttccgatatcattttattaaacagatcaactgcatctttcagtttaccaa |
29211532 |
T |
|
| Q |
152 |
cagtgggaaaaccactaattaaagcattgtaagt |
185 |
Q |
| |
|
||||| ||| ||||||||||||||| ||||||| |
|
|
| T |
29211533 |
cagtgaaaaacccactaattaaagcactgtaagt |
29211566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 29366725 - 29366918
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| |||| ||||||||| ||||||||| ||| | ||||| ||||| |||||||||| ||| ||||| || ||||||| |||||||||| |
|
|
| T |
29366725 |
ttcatcatcatagctagcacatttttagcttctttcaaccttctttccttacaaaatccatcaaccaatatgttaaaagtatacacatttgggttgatgt |
29366824 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatc |
194 |
Q |
| |
|
|||| | |||||||||| |||||| || ||||||| |||| |||| ||| || ||| ||||||||||||||||||||||| | |||||| |
|
|
| T |
29366825 |
tttcgaatatcattttattaaacaaatcagttgcatctttcattttaccgacaatgcaaaagccactaattaaagcattgtaagtaacaacatc |
29366918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 29099038 - 29098845
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| | || ||| ||||| ||||||||| | | || ||||| ||||| ||| ||||| ||||||||| || ||||||||||| ||||||| |
|
|
| T |
29099038 |
ttcatcatcatatcaaacacagttttaccttctttcatctttccgtccttacaaaatgcattaaccaatatattaaaagtatacacatccggtttgatgt |
29098939 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatc |
194 |
Q |
| |
|
||||| | |||||||||| |||| | |||||||||| |||| |||| || | || ||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
29098938 |
tttccaatatcattttattaaacagatcaattgcatctttcagtttaccaagaatgcaaaaaccactaattaaagcactgtaagtaacaacatc |
29098845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 29084713 - 29084529
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| || || ||| ||||| ||||||||| | | | ||||| ||||| |||||||||| ||||||||| || ||| ||||||| ||||||| |
|
|
| T |
29084713 |
ttcatcatcatagcaaacacagttttaccttctttcatctttctgtccttacaaaatccatcaaccaatatattaaaagtatacccatccggtttgatgt |
29084614 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagt |
185 |
Q |
| |
|
||||| | | |||||||| |||| | |||||||||| |||| |||| |||| | ||| ||||||||||||||| ||||||| |
|
|
| T |
29084613 |
tttccaatattattttattaaacagatcaattgcatctttcagtttaccaacaacgaaaaacccactaattaaagcactgtaagt |
29084529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 28927344 - 28927470
Alignment:
| Q |
59 |
catcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtggg |
158 |
Q |
| |
|
|||||| || |||||||||||| |||| || |||||||| ||||| | | ||||||||| ||||||||||||| ||||||||||||| || | || |
|
|
| T |
28927344 |
catcaatcaatatattaaaggtatacatatttgggttgatcttttctgatatcattttatgaaacaaaccaattgaatcattcaatttaccaagaatgca |
28927443 |
T |
|
| Q |
159 |
aaaaccactaattaaagcattgtaagt |
185 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
28927444 |
aaaaccactaattaaagcactgtaagt |
28927470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 25450603 - 25450459
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
|||||||||| |||||| || |||| | ||||||||| | || ||||| ||||| |||||||||| |||||| ||||| |||||| |||||||||| |
|
|
| T |
25450603 |
ttcatcatcacggctaacactactttagcatctttcacctttccttccttacaaaatccatcaaccaatatattgaaggtatacacagttgggttgatgt |
25450504 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatt |
145 |
Q |
| |
|
|||||| | |||| | || ||||||| ||||||||| ||||||| |
|
|
| T |
25450503 |
tttccgataccattatcttaaacaaactaattgcatctttcaatt |
25450459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 30154150 - 30154066
Alignment:
| Q |
46 |
tccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaa |
130 |
Q |
| |
|
||||| || ||||||||||||| |||||| ||||| ||||||| |||||| |||||| | |||||| |||||||||||||| |
|
|
| T |
30154150 |
tccttacataaaccatcaaccaatatattgaaggtatacacattggggttggtgtttttgagtatcatttcattgaacaaaccaa |
30154066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 22038 - 21818
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||| | ||||| | | || ||||| ||||| |||||||||| |||| ||||||| |||||||| ||| |||||| |
|
|
| T |
22038 |
ttcatcatcatagctaacacatttttagcctcttttatgtttccgtccttacaaaatccatcaaccaatatactaaaggtatacacatctgggatgatgt |
21939 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
||| || ||||||||||||||| ||| |||||||||| ||||||||| |||| || ||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
21938 |
ttttcgatgtcattttattgaataaatcaattgcatctttcaatttaccaacaatgcaaaagccactaattaaagcattgtaagtgaaaacatcggggaa |
21839 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
||||||||||| |||| |||| |
|
|
| T |
21838 |
aattctcttagaaaccttttc |
21818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 54006 - 54225
Alignment:
| Q |
2 |
tcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgtt |
101 |
Q |
| |
|
|||||||||| |||| ||||||||| ||| ||||| ||| || ||||| ||||| |||||||| | |||||||||||| ||||||||||| |||||||| |
|
|
| T |
54006 |
tcatcatcatatctaacacatttttagcttttttcagccttccttccttacaaaatccatcaactaatatattaaaggtatacacatccggtttgatgtt |
54105 |
T |
|
| Q |
102 |
ttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcca |
201 |
Q |
| |
|
|||| | |||||||||| |||| | |||||||||| |||| |||| |||| || ||| || |||||||||||| ||||||| | |||||| || | |
|
|
| T |
54106 |
ttccaatatcattttattaaacagatcaattgcatctttcagtttaccaacaatgaaaaaccctctaattaaagcactgtaagtaacaacatcgggagaa |
54205 |
T |
|
| Q |
202 |
attctcttagcaaccatttc |
221 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
54206 |
attctctttgcaaccatttc |
54225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 24219557 - 24219759
Alignment:
| Q |
19 |
acatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttat |
118 |
Q |
| |
|
||||||||| |||||||||| | || ||||| ||||| ||||||||| |||| ||||||| |||||| ||||||||||||||| | ||||||||| |
|
|
| T |
24219557 |
acatttttagcttctttcacttttccttccttacaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttat |
24219656 |
T |
|
| Q |
119 |
tgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccat |
218 |
Q |
| |
|
||||||||||||||||| ||||||| | | | || ||||||| |||||||| ||| ||||||| |||| ||| | |||||||||||||||||| |
|
|
| T |
24219657 |
gtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccat |
24219756 |
T |
|
| Q |
219 |
ttc |
221 |
Q |
| |
|
||| |
|
|
| T |
24219757 |
ttc |
24219759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15063180 - 15063400
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||||| ||||| | || ||||| ||||||||||||| || |||| |||| || ||||||| ||| || |||| |
|
|
| T |
15063180 |
ttcatcatcacagctaacacatttttagcttctctcacctttccttccttacaaaaaccatcaatcaatatactaaaagtatacacattcggattaatgt |
15063279 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggcc |
200 |
Q |
| |
|
| |||| | ||||| |||| |||||| ||| |||| ||||||||| |||| | ||| ||||||||||||| | | ||||||| |||||||| |
|
|
| T |
15063280 |
tgtccgatatcattctattaaacaaatcaacagcatatttcaatttaccaacaacgcaaaagccactaattaaagaactataagtgactacatcaggaga |
15063379 |
T |
|
| Q |
201 |
aattctcttagcaaccatttc |
221 |
Q |
| |
|
|||||| |||| ||||||||| |
|
|
| T |
15063380 |
aattcttttagaaaccatttc |
15063400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 10129790 - 10129612
Alignment:
| Q |
43 |
ccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattca |
142 |
Q |
| |
|
|||||||| |||||| ||||||||| |||| | | ||| || |||| ||||| ||||||||| | ||||||||| ||||||||||||||||| |||| |
|
|
| T |
10129790 |
ccatccttacaaaaagcatcaaccaatatactcatggtataaacatttgggttaatgttttccaatatcattttatgcaacaaaccaattgcatctttca |
10129691 |
T |
|
| Q |
143 |
atttagaaacagtgggaaaaccactaattaaagcattgtaagtgaaaacatcagggccaattctcttagcaaccatttc |
221 |
Q |
| |
|
||| | ||| | ||| |||||||||||| ||| ||||||| ||||||||| |||||||||||| | |||||| |
|
|
| T |
10129690 |
attgacccacaacgcaaaagccactaattaaattattataagtgacaacatcaggaaaaattctcttagcgatcatttc |
10129612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0654 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0654
Description:
Target: scaffold0654; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1524 - 1626
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||| |||| ||||||||| |||||||| | || ||||| |||||| |||| |||| ||||||||| || |||||||| |||||||||| |
|
|
| T |
1524 |
ttcatcatcatagctatcacatttttagcttctttcgtgtttccttccttacaaaaagcatcgaccaatatattaaaagtatacacatcagggttgatgt |
1623 |
T |
|
| Q |
101 |
ttt |
103 |
Q |
| |
|
||| |
|
|
| T |
1624 |
ttt |
1626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43591 - 43693
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
||||||||||||||||| | ||| ||| || ||||||| | || ||||| |||| | ||||||||| ||||||||| || ||||||| |||||||||| |
|
|
| T |
43591 |
ttcatcatcatggctaacagattcttagctcctttcacatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggttgatgt |
43690 |
T |
|
| Q |
101 |
ttt |
103 |
Q |
| |
|
||| |
|
|
| T |
43691 |
ttt |
43693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 105087 - 105144
Alignment:
| Q |
46 |
tccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgtttt |
103 |
Q |
| |
|
||||| |||| | ||||||||| ||||||||| || |||||||| ||||||||||||| |
|
|
| T |
105087 |
tccttacaaagagcatcaaccaatatattaaaagtatacacatctgggttgatgtttt |
105144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0308
Description:
Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 8690 - 8554
Alignment:
| Q |
1 |
ttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgt |
100 |
Q |
| |
|
|||| |||||| ||||| ||||||||| ||||||||| | || ||||| || | | ||||||||| ||||||||| || || |||| |||||||||| |
|
|
| T |
8690 |
ttcaccatcatagctaacacatttttagcttctttcatttttccttccttacagagagcatcaaccaatatattaaaagtataaacatttgggttgatgt |
8591 |
T |
|
| Q |
101 |
tttccgctgtcattttattgaacaaaccaattgcatc |
137 |
Q |
| |
|
||| | | ||||| ||||||||||| || |||||| |
|
|
| T |
8590 |
ttttcaataccatttcattgaacaaacgaaatgcatc |
8554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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