View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1435_high_137 (Length: 219)
Name: NF1435_high_137
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1435_high_137 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 24068567 - 24068785
Alignment:
| Q |
1 |
aactaaggtgcacatcaaagtggcaatgcatcagccaaacacctgtttaaagtgatcaaagtatcatataaataacttgagatacaagataagaaaaact |
100 |
Q |
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| T |
24068567 |
aactaaggtgcacatcaaagtggcaatgcatcagccaaacacctgtttaaagtgatcaaagtatcatataaataacttgagatacaagataagaaaaact |
24068666 |
T |
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| Q |
101 |
atatgatatataatatttggattgacttatttaagctgatcagactgtttagaagagcttatcaaaataaattgaaaacaacttacaacatgtcttgaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
24068667 |
atatgatatataatatttggattgacttatttaagctgatcagactgtttagaagagcttatcaaaataaattgaaaacaacttacaacatgtctttaaa |
24068766 |
T |
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| Q |
201 |
ttgtttttaatttattttc |
219 |
Q |
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||||||||||||||||||| |
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| T |
24068767 |
ttgtttttaatttattttc |
24068785 |
T |
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