View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1435_high_63 (Length: 315)
Name: NF1435_high_63
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1435_high_63 |
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Alignment Details
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 18 - 307
Target Start/End: Original strand, 32539292 - 32539581
Alignment:
| Q |
18 |
atataaaagacaattttttcaggaaaacaatctttgagaagtgtcattcttacttggtcagaagaaaaaacagttcagaatcatatgataatgagagtga |
117 |
Q |
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| T |
32539292 |
atataaaagacaattttttcaggaaaacaatctttgagaagtgtcattcttacttggtcagaagaaaaaacagttcagaatcatgtgataatgagagtga |
32539391 |
T |
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| Q |
118 |
gattcttgtgaagatgaaactgagtattgagaatattgacaagttagtacatgatcaagggacaataaaagagcttaagataaaaagtttgaggaattca |
217 |
Q |
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| T |
32539392 |
gattcttgtgaagatgaaattgagtattgagaatattgacaagttagtacatgatcaagggacaataaaagagcttaagataaaaagtttgaggaattca |
32539491 |
T |
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| Q |
218 |
attgagcttttaaccataattgcagaattaaattccaatagtttacaagttgcaacaacatgtggaataccaaattctcatctctctgct |
307 |
Q |
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| T |
32539492 |
attgagcttttaaccataattgcagaattaaattccaatagtttacaagttgcaacaacatgcggaataccaaattctcatctctctgct |
32539581 |
T |
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