View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1435_high_98 (Length: 251)
Name: NF1435_high_98
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1435_high_98 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 29132127 - 29131885
Alignment:
| Q |
1 |
catgttggtataaatttaggtagcatagtatctactaaaattatcaatgtttcagatattggagtttctcttaaggatggttttgttcaccatgcttgga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29132127 |
catgttggtataaatttaggtagcatagtatctactaaaattatcaatgtttcagatattggagtttctcttaaggatggttttgttcaccatgcttgga |
29132028 |
T |
|
| Q |
101 |
ttgattatgatggtcctcgaagacgaattgacattcgtttaggacttgctaatcaagatgtttatcctactaagcctattttctcggagtttatggatct |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29132027 |
ttgattatgatggtcctcaaagacgaattgacattcgtttaggacttgctaatcaagatgtttatcctactaagcctattttctcggagtttatggatct |
29131928 |
T |
|
| Q |
201 |
gtcaccttatctgaatgagtatatgtttgtaggattctctgct |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
29131927 |
ttcaccttatctgaatgagtatatgtttgtaggattctctgct |
29131885 |
T |
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