View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1435_low_109 (Length: 250)
Name: NF1435_low_109
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1435_low_109 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 26944808 - 26944564
Alignment:
| Q |
1 |
ctttttgcttcaactcttctatgtatttggaggcgtccacaataattgaggctttgttcatctgccaattacccatttcaaattaattaaaggaggtcca |
100 |
Q |
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| T |
26944808 |
ctttttgcttcaactcttttatgtatttggaggcgtccacaataattgaggctttgttcatctgccaattacccatttgaaattaattaaaggaggtcca |
26944709 |
T |
|
| Q |
101 |
tagttcaatattttctactaa-----aattaacatttccatgtaagaaaaacataagtaatagcattgtatcttcattgtaagaaaaacatatatgctaa |
195 |
Q |
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||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26944708 |
tagttcaatattttctactaaaatataattaacatttgcatgtaagaaaaacataagtaatagcattgtatcttcattgtaagaaaaacatatatgctaa |
26944609 |
T |
|
| Q |
196 |
ttcttatagcttctgtttagtagattttggttttctcaccctttg |
240 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26944608 |
ttcttatagcttctgtttagtagattttggttttctcaccctttg |
26944564 |
T |
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