View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1435_low_112 (Length: 246)
Name: NF1435_low_112
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1435_low_112 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 44999076 - 44999286
Alignment:
| Q |
11 |
cagagaaaacaggggaggatgaagtaaatgtatggacaatttcttatttcattaccaagagtatcatagagaggcacacaaaccaagctatgggcgcaac |
110 |
Q |
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| T |
44999076 |
cagagaaaacaggggaggatgaagtaaatgtatggacaatttcttatattattaccaagagtatcatagagaggcacacaaaccaagctatgggcgcaac |
44999175 |
T |
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| Q |
111 |
aagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaaggaaggaaaaaataaataaataaagaaatgtgagaac |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
44999176 |
aagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaaggaaggaaaaaataaataaat----aaatgtgagaac |
44999271 |
T |
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| Q |
211 |
gttatatagaaatgg |
225 |
Q |
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||||||||||||||| |
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| T |
44999272 |
gttatatagaaatgg |
44999286 |
T |
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