View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1435_low_124 (Length: 238)
Name: NF1435_low_124
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1435_low_124 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3357108 - 3356888
Alignment:
| Q |
1 |
tgcaccggaggatgtggtatgaatgaggatagagaacatcaatttgttacctgtgatttttatggaaagattcgccaagttgtatgtggttggttaggtt |
100 |
Q |
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| T |
3357108 |
tgcaccggaggatgtggtatgaatgaggatagagaacatcaatttgttacatgtgatttttatggaaagattcgccaggttgtatgtggttggttaggtt |
3357009 |
T |
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| Q |
101 |
tttcaactgcagttcaggggaagttgatgggtcatcttgatcagtttagtggcttatgaggctttccaaaacaaatatgcaaggtgtttaacattatttg |
200 |
Q |
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| T |
3357008 |
tttcaactgcagttcaggggaagttgatgggtcatcttgatcagtttagtggcttatgaggctttccaaaataaatatgcaaggtgtttaacattatttg |
3356909 |
T |
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| Q |
201 |
gatttcagttgtttgggttat |
221 |
Q |
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| T |
3356908 |
gatttcagttgtttgggttat |
3356888 |
T |
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