View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1435_low_84 (Length: 282)

Name: NF1435_low_84
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1435_low_84
NF1435_low_84
[»] chr7 (24 HSPs)
chr7 (16-164)||(31097795-31097943)
chr7 (16-163)||(32660952-32661099)
chr7 (16-59)||(31097626-31097669)
chr7 (39-140)||(21681015-21681116)
chr7 (97-153)||(3840650-3840706)
chr7 (97-153)||(13786334-13786390)
chr7 (97-153)||(16376554-16376610)
chr7 (39-132)||(21651484-21651577)
chr7 (97-153)||(21670145-21670201)
chr7 (97-153)||(21804581-21804637)
chr7 (97-153)||(27903426-27903482)
chr7 (97-153)||(33916956-33917012)
chr7 (97-153)||(38163348-38163404)
chr7 (105-153)||(40969063-40969111)
chr7 (97-153)||(42242163-42242219)
chr7 (97-148)||(24924243-24924294)
chr7 (97-153)||(17178246-17178302)
chr7 (97-153)||(31373620-31373676)
chr7 (118-153)||(21342008-21342043)
chr7 (44-147)||(21713585-21713688)
chr7 (102-153)||(43933553-43933604)
chr7 (121-162)||(7853687-7853728)
chr7 (121-162)||(44579787-44579828)
chr7 (97-153)||(27138537-27138593)
[»] scaffold0896 (1 HSPs)
scaffold0896 (16-162)||(1000-1146)
[»] chr6 (22 HSPs)
chr6 (16-162)||(8657064-8657210)
chr6 (16-162)||(33289070-33289216)
chr6 (107-164)||(24570752-24570809)
chr6 (97-153)||(3593057-3593113)
chr6 (97-163)||(1405562-1405628)
chr6 (103-153)||(8539723-8539773)
chr6 (103-153)||(17202602-17202652)
chr6 (52-153)||(162678-162779)
chr6 (97-162)||(13533931-13533996)
chr6 (97-153)||(2266940-2266996)
chr6 (97-153)||(12597274-12597330)
chr6 (97-153)||(19997829-19997885)
chr6 (97-153)||(33646106-33646162)
chr6 (102-153)||(15044891-15044942)
chr6 (97-153)||(28099606-28099662)
chr6 (52-151)||(6300720-6300819)
chr6 (52-151)||(6307530-6307629)
chr6 (120-162)||(14671898-14671940)
chr6 (117-151)||(25342648-25342682)
chr6 (97-153)||(2005592-2005648)
chr6 (97-153)||(10584737-10584793)
chr6 (95-151)||(30142982-30143038)
[»] chr8 (26 HSPs)
chr8 (16-163)||(405353-405500)
chr8 (16-162)||(17695516-17695662)
chr8 (50-163)||(44831133-44831246)
chr8 (21-125)||(1848914-1849018)
chr8 (15-58)||(44831791-44831834)
chr8 (97-153)||(39997855-39997911)
chr8 (97-163)||(28583019-28583085)
chr8 (104-153)||(23353631-23353680)
chr8 (97-153)||(995824-995880)
chr8 (97-153)||(6299029-6299085)
chr8 (97-153)||(10478101-10478157)
chr8 (97-153)||(11142631-11142687)
chr8 (97-153)||(11725354-11725410)
chr8 (97-153)||(15961296-15961352)
chr8 (97-153)||(18175545-18175601)
chr8 (97-153)||(18997864-18997920)
chr8 (97-153)||(30473893-30473949)
chr8 (97-153)||(32110870-32110926)
chr8 (102-153)||(18842073-18842124)
chr8 (102-153)||(44837078-44837129)
chr8 (97-153)||(35122331-35122387)
chr8 (97-153)||(44832195-44832251)
chr8 (125-164)||(16367879-16367918)
chr8 (102-153)||(18569034-18569085)
chr8 (97-150)||(24409040-24409093)
chr8 (125-162)||(42308123-42308160)
[»] chr1 (21 HSPs)
chr1 (16-165)||(28947451-28947600)
chr1 (16-163)||(29387886-29388033)
chr1 (97-153)||(18706518-18706574)
chr1 (103-153)||(23482716-23482766)
chr1 (97-153)||(1231960-1232016)
chr1 (97-153)||(35614231-35614287)
chr1 (91-153)||(52957034-52957096)
chr1 (97-153)||(4266545-4266601)
chr1 (97-153)||(29942182-29942238)
chr1 (97-153)||(31018209-31018265)
chr1 (97-153)||(34888695-34888751)
chr1 (97-153)||(38913756-38913812)
chr1 (97-153)||(50326165-50326221)
chr1 (119-153)||(2590466-2590500)
chr1 (103-153)||(18855242-18855292)
chr1 (102-147)||(14009850-14009895)
chr1 (117-153)||(2951375-2951411)
chr1 (97-153)||(9216195-9216251)
chr1 (97-153)||(38444795-38444851)
chr1 (97-153)||(52687123-52687179)
chr1 (125-162)||(51387129-51387166)
[»] chr3 (24 HSPs)
chr3 (16-160)||(37099627-37099771)
chr3 (97-153)||(4584443-4584499)
chr3 (97-153)||(6460177-6460233)
chr3 (97-153)||(20671413-20671469)
chr3 (97-153)||(26948962-26949018)
chr3 (97-153)||(36076463-36076519)
chr3 (97-153)||(1941729-1941785)
chr3 (97-153)||(3898586-3898642)
chr3 (97-153)||(12264364-12264420)
chr3 (97-153)||(34121519-34121575)
chr3 (97-153)||(38653936-38653992)
chr3 (97-153)||(43363620-43363676)
chr3 (97-153)||(49672726-49672782)
chr3 (97-153)||(55041592-55041648)
chr3 (121-163)||(5561552-5561594)
chr3 (97-153)||(21098468-21098524)
chr3 (97-153)||(31488575-31488631)
chr3 (97-153)||(49478372-49478428)
chr3 (97-153)||(49506358-49506414)
chr3 (118-153)||(40014662-40014697)
chr3 (122-160)||(53556913-53556951)
chr3 (125-162)||(44708227-44708264)
chr3 (122-163)||(44751631-44751672)
chr3 (102-142)||(39146609-39146649)
[»] chr4 (29 HSPs)
chr4 (16-162)||(19745141-19745287)
chr4 (16-162)||(19794519-19794665)
chr4 (16-162)||(23976706-23976852)
chr4 (97-163)||(44376078-44376144)
chr4 (97-153)||(16904961-16905017)
chr4 (97-153)||(37590813-37590869)
chr4 (97-153)||(46256198-46256254)
chr4 (52-153)||(18209630-18209731)
chr4 (118-163)||(35760766-35760811)
chr4 (97-153)||(12090468-12090524)
chr4 (95-151)||(22289966-22290022)
chr4 (97-153)||(30824931-30824987)
chr4 (97-153)||(33139480-33139536)
chr4 (97-153)||(37651830-37651886)
chr4 (97-153)||(47142809-47142865)
chr4 (97-153)||(52434788-52434844)
chr4 (97-164)||(39058355-39058422)
chr4 (118-153)||(48118543-48118578)
chr4 (121-163)||(11238181-11238223)
chr4 (97-153)||(16917897-16917953)
chr4 (123-162)||(9199866-9199905)
chr4 (123-162)||(9201405-9201444)
chr4 (118-153)||(31965978-31966013)
chr4 (125-164)||(32225581-32225620)
chr4 (97-164)||(53143260-53143327)
chr4 (125-163)||(17558824-17558862)
chr4 (96-142)||(35903632-35903678)
chr4 (95-151)||(37340614-37340669)
chr4 (97-153)||(41387290-41387346)
[»] chr2 (15 HSPs)
chr2 (16-158)||(31572364-31572506)
chr2 (97-153)||(31424173-31424229)
chr2 (97-153)||(8700425-8700481)
chr2 (97-153)||(19596372-19596428)
chr2 (97-153)||(6120716-6120772)
chr2 (97-153)||(18351715-18351771)
chr2 (97-153)||(27944805-27944861)
chr2 (97-153)||(41664674-41664730)
chr2 (97-153)||(44902245-44902301)
chr2 (97-153)||(20544989-20545045)
chr2 (97-153)||(41663401-41663457)
chr2 (97-153)||(42442128-42442184)
chr2 (125-162)||(22136279-22136316)
chr2 (97-138)||(36279478-36279519)
chr2 (97-137)||(692227-692267)
[»] chr5 (20 HSPs)
chr5 (16-163)||(30096275-30096422)
chr5 (16-162)||(30088702-30088834)
chr5 (172-259)||(26410463-26410559)
chr5 (97-162)||(25099236-25099301)
chr5 (97-162)||(25158326-25158391)
chr5 (52-153)||(8179762-8179864)
chr5 (97-153)||(20655058-20655114)
chr5 (97-153)||(33375928-33375984)
chr5 (97-153)||(2398951-2399007)
chr5 (97-153)||(10729451-10729507)
chr5 (97-153)||(16526315-16526371)
chr5 (97-153)||(20874852-20874908)
chr5 (97-153)||(34107347-34107403)
chr5 (97-153)||(34110816-34110872)
chr5 (97-153)||(38246874-38246930)
chr5 (97-153)||(40177205-40177261)
chr5 (125-164)||(16349713-16349752)
chr5 (125-162)||(4082591-4082628)
chr5 (97-153)||(1396153-1396209)
chr5 (125-162)||(40951487-40951524)
[»] scaffold0051 (1 HSPs)
scaffold0051 (16-132)||(10254-10370)
[»] scaffold0007 (1 HSPs)
scaffold0007 (39-129)||(79105-79195)
[»] scaffold0515 (1 HSPs)
scaffold0515 (102-162)||(6061-6121)
[»] scaffold0306 (1 HSPs)
scaffold0306 (102-162)||(6071-6131)
[»] scaffold0031 (1 HSPs)
scaffold0031 (97-153)||(46438-46494)
[»] scaffold0173 (1 HSPs)
scaffold0173 (97-153)||(19511-19567)
[»] scaffold0022 (1 HSPs)
scaffold0022 (97-153)||(149059-149115)
[»] scaffold0836 (1 HSPs)
scaffold0836 (97-153)||(5287-5343)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 6e-74; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 31097795 - 31097943
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31097795 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaatgttgcttttgtctactaca 31097894  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagttt 164  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31097895 cttacaatgtatatgacccgtgcggcagcacgggtggacgatctagttt 31097943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 32660952 - 32661099
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32660952 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttggcactgtattataaaattttgcttttgtctactaca 32661051  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32661052 cttacaatgtatatgactcgtgcggcagcacgggtagacgatctagtt 32661099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31097626 - 31097669
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattat 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31097626 gaatcaattatacaatttccttctatagttgtatttaaaattat 31097669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 21681015 - 21681116
Alignment:
Q  39 tatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatatgactcgtgc 138  Q
    |||| |||||||||   |||| |||||||||||||||||||||  |||  |||| ||||||  |||||||||||||| |||| ||||||||||| |||||    
T  21681015 tataattgtatttattcttataacattaaaattataagttgggtatgtgctatataattttatttttgtctactacatttacgatgtatatgacccgtgc 21681114  T
Q  139 gg 140  Q
    ||    
T  21681115 gg 21681116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 3840706 - 3840650
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  3840706 tttgtttttgtctactatatctacaatgtatatgactcgtgcggcagcacgggtgga 3840650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 13786334 - 13786390
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  13786334 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 13786390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 16376610 - 16376554
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  16376610 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 16376554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 21651484 - 21651577
Alignment:
Q  39 tatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatatgac 132  Q
    |||| |||||||||  ||||| |||||||||||||||||||||   ||| |||  |||||||||| |||||| | || ||||||||||||||||    
T  21651484 tataattgtatttattattataacattaaaattataagttgggtaagtactatctaattttgcttctgtctattgcatttacaatgtatatgac 21651577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 21670145 - 21670201
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  |||||||||||||||  |||||||||||||||||||    
T  21670145 tttgtttttgtctactacatctacaatgtatatgacctgtgcggcagcacgggtgga 21670201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 21804637 - 21804581
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  21804637 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 21804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 27903482 - 27903426
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  |||||| |||||||| ||||||||||||||||||||    
T  27903482 tttgtttttgtctactacatctacaatatatatgacccgtgcggcagcacgggtgga 27903426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 33917012 - 33916956
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  33917012 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 33916956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 38163404 - 38163348
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  38163404 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 38163348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 40969063 - 40969111
Alignment:
Q  105 tgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  40969063 tgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 40969111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 42242219 - 42242163
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  42242219 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 42242163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 24924243 - 24924294
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgg 148  Q
    |||| ||||||||||||||  ||||||||||||||| |||||||||||||||    
T  24924243 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgg 24924294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 17178302 - 17178246
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| | ||||||||||||||||||    
T  17178302 tttgtttttgtctactatatctacaatgtatatgacccatgcggcagcacgggtgga 17178246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 31373620 - 31373676
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||| || |  ||||||||||||||| ||||||||||||||||||||    
T  31373620 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 31373676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 21342008 - 21342043
Alignment:
Q  118 tacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||||| ||||||||||||||||||||    
T  21342008 tacaatgtatatgacccgtgcggcagcacgggtgga 21342043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 21713585 - 21713688
Alignment:
Q  44 ttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatatgactcgtgcggcag 143  Q
    |||||||||  ||||| |||||||||||||||  | ||  |||| |||| |||||||||||| |||||||||  |||  |||||||||| | ||||| ||    
T  21713585 ttgtatttattattataacattaaaattataaaattggtatgtactatataattttgcttttatctactacatctacggtgtatatgacccatgcggtag 21713684  T
Q  144 cacg 147  Q
    ||||    
T  21713685 cacg 21713688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 43933604 - 43933553
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||||  ||||||||||||||| | ||||| ||||||||||||    
T  43933604 ttttgtctactacatctacaatgtatatgacccttgcggtagcacgggtgga 43933553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 7853687 - 7853728
Alignment:
Q  121 aatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||||||| ||||||| ||||||||| |||||||||||    
T  7853687 aatgtatatgacccgtgcggtagcacgggtagacgatctagt 7853728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 44579787 - 44579828
Alignment:
Q  121 aatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||||||| |||||||||||| |||| |||||||||||    
T  44579787 aatgtatatgacccgtgcggcagcatgggtagacgatctagt 44579828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 27138593 - 27138537
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  || ||||||||||||  |||||||||||||||||||    
T  27138593 tttgtttttgtctactatatctagaatgtatatgacctgtgcggcagcacgggtgga 27138537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 1000 - 1146
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1000 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggattgtattataaaattttgcttttgtctactaca 1099  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  1100 cttacaatgtatatgacccgtgcggcagcacgggtggacgatctagt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 9e-73; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 8657210 - 8657064
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8657210 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggattgtattataaaattttgcttttgtctactaca 8657111  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  8657110 cttacaatgtatatgacccgtgcggcagcacgggtggacgatctagt 8657064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 33289216 - 33289070
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| |||| |||||||||||||| |||    
T  33289216 gaatcaattatacaaatttcttctatagttgtatttataattttgacattaaaattataagttgggactatattatcaaatgttgcttttgtctaccaca 33289117  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||    
T  33289116 cttacaatctatatgacccgtgcggcagcacgggtggacgatctagt 33289070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 24570809 - 24570752
Alignment:
Q  107 tctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagttt 164  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  24570809 tctactacacttacaatgtatatgacccgtgtggcagcacgggtggacgatctagttt 24570752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 3593057 - 3593113
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  3593057 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 3593113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 1405628 - 1405562
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    |||| |||| |||||||||  ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  1405628 tttgtttttatctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagtt 1405562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 8539723 - 8539773
Alignment:
Q  103 tttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  8539723 tttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 8539773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 17202602 - 17202652
Alignment:
Q  103 tttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||||||  |||||||||||||||| |||||||||||||||||||    
T  17202602 tttgtctactacatctacaatgtatatgacttgtgcggcagcacgggtgga 17202652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 162779 - 162678
Alignment:
Q  52 aaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtg 151  Q
    ||||| |||||||||||||||||||||   | || | |||  |||||||||||   |||||||| ||  |||||||||||| ||||||||||||||||||    
T  162779 aaaataatgacattaaaattataagttataattgaactattgaattttgctttgacctactacattttgaatgtatatgacccgtgcggcagcacgggtg 162680  T
Q  152 ga 153  Q
    ||    
T  162679 ga 162678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 13533931 - 13533996
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||| |||| |||||||||  ||||||||||||||| ||||||||||||||||||||  |||||||    
T  13533931 tttgtttttatctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 13533996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 2266940 - 2266996
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  2266940 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 2266996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 12597330 - 12597274
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  12597330 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 12597274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 19997829 - 19997885
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  19997829 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 19997885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 33646106 - 33646162
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  33646106 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 33646162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 15044891 - 15044942
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||||||||    
T  15044891 ttttgtctactacatctacaatgtatatgacctgtgcggcagcacgggtgga 15044942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 28099662 - 28099606
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||| || |  ||||||||||||||| ||||||||||||||||||||    
T  28099662 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 28099606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 6300819 - 6300720
Alignment:
Q  52 aaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtg 151  Q
    ||||| |||||||||||| ||||| |||  | ||   ||| ||| |||| ||||| |||||| |  ||||||||||||||| ||||||||||||||||||    
T  6300819 aaaataatgacattaaaactataaattgtaattgagctattaaactttgtttttgcctactagatatacaatgtatatgacccgtgcggcagcacgggtg 6300720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 6307629 - 6307530
Alignment:
Q  52 aaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtg 151  Q
    ||||| |||||||||||| ||||| |||  | ||   ||| ||| |||| ||||| |||||| |  ||||||||||||||| ||||||||||||||||||    
T  6307629 aaaataatgacattaaaactataaattgtaattgagctattaaactttgtttttgcctactagatatacaatgtatatgacccgtgcggcagcacgggtg 6307530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 14671898 - 14671940
Alignment:
Q  120 caatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||    
T  14671898 caatgtatatgacacgtgcggcagcacaggtggaagatctagt 14671940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 25342682 - 25342648
Alignment:
Q  117 ttacaatgtatatgactcgtgcggcagcacgggtg 151  Q
    ||||| |||||||||||||||||||||||||||||    
T  25342682 ttacattgtatatgactcgtgcggcagcacgggtg 25342648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 2005592 - 2005648
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||| ||  ||||||||||||||| |||||||| ||||| |||||    
T  2005592 tttgtttttgtctactgcatctacaatgtatatgacccgtgcggccgcacgagtgga 2005648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 10584793 - 10584737
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| | |  |||||||||||||||    
T  10584793 tttgtttttgtctactacatctacaatgtatatgacccatatggcagcacgggtgga 10584737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 30142982 - 30143038
Alignment:
Q  95 attttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtg 151  Q
    |||||||||||||||||||   ||||| | |||||| ||||||||||| ||||||||    
T  30142982 attttgcttttgtctactatttttacattatatatgtctcgtgcggcaacacgggtg 30143038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 5e-71; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 405500 - 405353
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  405500 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggattgtattataaaattttgcttttgtctactata 405401  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  405400 cttacaatgtatatgacccgtgcggcagcacgggtggacgatctagtt 405353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 17695516 - 17695662
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17695516 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttatctactaca 17695615  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  17695616 cttacaatgtatattacccgtgcggcagcacgggtggacgatctagt 17695662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 44831246 - 44831133
Alignment:
Q  50 ttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacggg 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  44831246 ttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttatctactacacttacaatgtatatgacccgagcggcagcacggg 44831147  T
Q  150 tggacgatctagtt 163  Q
    ||||| ||||||||    
T  44831146 tggactatctagtt 44831133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 1849018 - 1848914
Alignment:
Q  21 aattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttac 120  Q
    ||||||||||| | ||| ||||||| | ||||||||||||| ||||||| |||||||||||| |||| |||||||||||||| |||||||||||| |||     
T  1849018 aattatacaatctgcttttatagttctgtttaaaattatgatattaaaaatataagttgggattgtactataaaattttgctgttgtctactacatttat 1848919  T
Q  121 aatgt 125  Q
    |||||    
T  1848918 aatgt 1848914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 44831834 - 44831791
Alignment:
Q  15 agaatcaattatacaatttccttctatagttgtatttaaaatta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44831834 agaatcaattatacaatttccttctatagttgtatttaaaatta 44831791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 39997855 - 39997911
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  39997855 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 39997911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 28583019 - 28583085
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    |||| |||| |||||||||  ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  28583019 tttgtttttatctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagtt 28583085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 23353680 - 23353631
Alignment:
Q  104 ttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  23353680 ttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 23353631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 995880 - 995824
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  995880 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 995824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 6299085 - 6299029
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  6299085 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 6299029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 10478101 - 10478157
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  10478101 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 10478157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 11142631 - 11142687
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||  ||||||||||||||||||||    
T  11142631 tttgtttttgtctactacatctacaatgtatatgatccgtgcggcagcacgggtgga 11142687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 11725354 - 11725410
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||| ||||||||||||||    
T  11725354 tttgtttttgtctactacatctacaatgtatatgacccgtgcagcagcacgggtgga 11725410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 15961296 - 15961352
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  15961296 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 15961352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 18175545 - 18175601
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  18175545 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 18175601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 18997864 - 18997920
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  18997864 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 18997920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 30473949 - 30473893
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  30473949 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 30473893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 32110926 - 32110870
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  32110926 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 32110870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 18842073 - 18842124
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||||  ||||||||||||||| |||||||||| |||||||||    
T  18842073 ttttgtctactacatctacaatgtatatgacccgtgcggcagaacgggtgga 18842124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 44837078 - 44837129
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  44837078 ttttgtctactacatctacaatgtatataacccgtgcggcagcacgggtgga 44837129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 35122387 - 35122331
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| |||||| ||||| |||||||    
T  35122387 tttgtttttgtctactacatctacaatgtatatgacccgtgcgacagcaggggtgga 35122331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 44832251 - 44832195
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||| ||||||||||    
T  44832251 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcaacacgggtgga 44832195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 16367879 - 16367918
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagttt 164  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  16367879 tatatgacccgtgcggcagcacgggtagacgatctagttt 16367918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 18569034 - 18569085
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||| |||  ||||||||||||||| ||||||| ||||||||||||    
T  18569034 ttttgtctacaacatctacaatgtatatgacccgtgcggtagcacgggtgga 18569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 24409040 - 24409093
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggt 150  Q
    |||| |||| |||||||||  ||||||||||||||| ||||||||| |||||||    
T  24409040 tttgtttttatctactacatctacaatgtatatgacccgtgcggcaacacgggt 24409093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 42308160 - 42308123
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  42308160 tatatgacccgtgcggcagcacaggtggacgatctagt 42308123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 8e-70; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 28947600 - 28947451
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28947600 gaatcaattatacaatttctttctatagttgtatttaaaattatgacattaaaattataagttgagactgtattataaaattttgcttttgtctactaca 28947501  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagttta 165  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  28947500 cttataatgtatatgacccgtgcggcagcacgggtggacgatctagttta 28947451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 29388033 - 29387886
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  29388033 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggattgtattataaaattttgtttttgtctactaca 29387934  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  29387933 cttacaatgtatatgacccgtgcggcagtacgggtggacgatctagtt 29387886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 18706574 - 18706518
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  18706574 tttgtttttgtctactacatctacaatgtatatgactcgtgcggcagcacgggtgga 18706518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 23482766 - 23482716
Alignment:
Q  103 tttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  23482766 tttgtctactacatctacaatgtatatgactcgtgcggcagcacgggtgga 23482716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 1231960 - 1232016
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  1231960 tttgtttttgtctactatatttacaatgtatatgacccgtgcggcagcacgggtgga 1232016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 35614231 - 35614287
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  35614231 tttgtttttgtctactacatttacaatgtatatgacccgtgcggtagcacgggtgga 35614287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 52957034 - 52957096
Alignment:
Q  91 taaaattttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||||||| | ||| ||||  ||||||||||||||| ||||||||||||||||||||    
T  52957034 taaaattttgctttggcctaatacatctacaatgtatatgacccgtgcggcagcacgggtgga 52957096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 4266545 - 4266601
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  4266545 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 4266601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 29942182 - 29942238
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  29942182 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 29942238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 31018265 - 31018209
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  31018265 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 31018209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 34888751 - 34888695
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  34888751 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 34888695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 38913812 - 38913756
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  38913812 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 38913756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 50326165 - 50326221
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  50326165 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 50326221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 2590466 - 2590500
Alignment:
Q  119 acaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||||||||||||||||||||||||||||    
T  2590466 acaatgtatatgactcgtgcggcagcacgggtgga 2590500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 18855292 - 18855242
Alignment:
Q  103 tttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||| ||  ||||||||||||||| ||||||||||||||||||||    
T  18855292 tttgtctactgcatctacaatgtatatgacccgtgcggcagcacgggtgga 18855242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 14009850 - 14009895
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggcagcacg 147  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||||    
T  14009850 ttttgtctactacatttacaatttatatgacccgtgcggcagcacg 14009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 2951411 - 2951375
Alignment:
Q  117 ttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||||||||||||||| ||||||||||||||||||||    
T  2951411 ttacaatgtatatgacccgtgcggcagcacgggtgga 2951375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 9216195 - 9216251
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||| ||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  9216195 tttgtttttatctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 9216251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 38444795 - 38444851
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| | ||||||| ||||||||||    
T  38444795 tttgtttttgtctactacatctacaatgtatatgacccatgcggcatcacgggtgga 38444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 52687179 - 52687123
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||| |||||||  ||||||||||||||| |||||| |||||||||||||    
T  52687179 tttgtttttgtatactacatctacaatgtatatgacccgtgcgacagcacgggtgga 52687123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 51387166 - 51387129
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  51387166 tatatgacccgtgcggcagcacgggtagacgatctagt 51387129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 37099627 - 37099771
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  37099627 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattacaagttgggactgtattataaaattttacttttgtctactaca 37099726  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatcta 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  37099727 cttacaatgtatatgacccgtgcggcagcacgggtggacgatcta 37099771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 4584499 - 4584443
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  4584499 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 4584443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 6460233 - 6460177
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  6460233 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 6460177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 20671413 - 20671469
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  20671413 tttgtttttgtctactacatctacaatgtatatgactcgtgtggcagcacgggtgga 20671469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 26948962 - 26949018
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  26948962 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 26949018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 36076519 - 36076463
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  36076519 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 36076463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 1941785 - 1941729
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  1941785 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 1941729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 3898586 - 3898642
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  3898586 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 3898642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 12264364 - 12264420
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  12264364 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 12264420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 34121519 - 34121575
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  34121519 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 34121575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 38653992 - 38653936
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  38653992 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 38653936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 43363676 - 43363620
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  43363676 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 43363620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 49672726 - 49672782
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  49672726 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 49672782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 55041648 - 55041592
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||| ||||||||||||    
T  55041648 tttgtttttgtctactacatctacaatgtatatgacccgtgcggtagcacgggtgga 55041592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 5561594 - 5561552
Alignment:
Q  121 aatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  5561594 aatgtatatgacccgtgcggcagcacgggtagacgatctagtt 5561552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 21098468 - 21098524
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||| || |  ||||||||||||||| ||||||||||||||||||||    
T  21098468 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 21098524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 31488575 - 31488631
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  |||||||||||| || ||||||||||||||| ||||    
T  31488575 tttgtttttgtctactacatctacaatgtatataacccgtgcggcagcacggatgga 31488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 49478372 - 49478428
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||| ||||||||   ||||||||| ||||||||||||||||||||||||||    
T  49478372 tttgtttttatctactacgtctacaatgtaaatgactcgtgcggcagcacgggtgga 49478428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 49506414 - 49506358
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| |||||||||| |||||||||    
T  49506414 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagtacgggtgga 49506358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 40014697 - 40014662
Alignment:
Q  118 tacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40014697 tacaatgtatatgacccgtgcggcagcacgggtgga 40014662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 160
Target Start/End: Complemental strand, 53556951 - 53556913
Alignment:
Q  122 atgtatatgactcgtgcggcagcacgggtggacgatcta 160  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  53556951 atgtatatgacccgtgcggcagcacgggtggatgatcta 53556913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 44708264 - 44708227
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  44708264 tatatgacccgtgcggcagcacgggtagacgatctagt 44708227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 44751672 - 44751631
Alignment:
Q  122 atgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    ||||||||||| |||||||||||| ||||||| |||||||||    
T  44751672 atgtatatgacccgtgcggcagcatgggtggatgatctagtt 44751631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 39146609 - 39146649
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggca 142  Q
    ||||||||||||||  ||||||||||||||| |||||||||    
T  39146609 ttttgtctactacatctacaatgtatatgacccgtgcggca 39146649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 19745141 - 19745287
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  19745141 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaatgttgcctttgtctactaca 19745240  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19745241 cttacaatgtatatgacccgtgcggccgcacgggtggacgatctagt 19745287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 19794665 - 19794519
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  19794665 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaatgttgcctttgtctactaca 19794566  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19794565 cttacaatgtatatgacccgtgcggccgcacgggtggacgatctagt 19794519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 23976852 - 23976706
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  23976852 gaatcaattatacaatctccttctacagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaatgttgcttttgtgtactaca 23976753  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||    
T  23976752 cttacaatatatatgacccgtgcggcagcacgggtggacgatctagt 23976706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 44376144 - 44376078
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  44376144 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggacgatctagtt 44376078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 16905017 - 16904961
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  16905017 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 16904961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 37590869 - 37590813
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  37590869 tttgattttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 37590813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 46256198 - 46256254
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  46256198 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 46256254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 18209630 - 18209731
Alignment:
Q  52 aaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtg 151  Q
    ||||| |||||||||||||||||||||   | || | |||  |||||||||||   |||||||| ||  |||||||||||| ||||||||||||||||||    
T  18209630 aaaataatgacattaaaattataagttataattgaactattgaattttgctttgacctactacattttgaatgtatatgacccgtgcggcagcacgggtg 18209729  T
Q  152 ga 153  Q
    ||    
T  18209730 ga 18209731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 35760766 - 35760811
Alignment:
Q  118 tacaatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  35760766 tacaatgtatatgactcgtgcggcagcacgggtggaaaatctagtt 35760811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 12090524 - 12090468
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  12090524 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 12090468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 22290022 - 22289966
Alignment:
Q  95 attttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtg 151  Q
    |||||| ||||| || ||||| || ||||||||||||||||||||||||||||||||    
T  22290022 attttgtttttgccttctacattttcaatgtatatgactcgtgcggcagcacgggtg 22289966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 30824987 - 30824931
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  30824987 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 30824931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 33139536 - 33139480
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  33139536 tttgtttttgtctactaaatctacaatgtatatgacccgtgcggcagcacgggtgga 33139480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 37651830 - 37651886
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  37651830 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 37651886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 47142865 - 47142809
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  |||||||||||||||  |||||||||||||||||||    
T  47142865 tttgtttttgtctactacatctacaatgtatatgaccagtgcggcagcacgggtgga 47142809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 52434788 - 52434844
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  52434788 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 52434844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 39058422 - 39058355
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagttt 164  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||| ||||||  |||||||||    
T  39058422 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacaggtggaaaatctagttt 39058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 48118578 - 48118543
Alignment:
Q  118 tacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  48118578 tacaatgtatatgactcgtgcggcagcacgggtgga 48118543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 11238181 - 11238223
Alignment:
Q  121 aatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  11238181 aatgtatatgacccgtgcggcagcacgggtggccgatctagtt 11238223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 16917953 - 16917897
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||| ||||||    
T  16917953 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacaggtgga 16917897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 9199905 - 9199866
Alignment:
Q  123 tgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  9199905 tgtatatgacccgtgcggcagcacgggtagacgatctagt 9199866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 9201444 - 9201405
Alignment:
Q  123 tgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  9201444 tgtatatgacccgtgcggcagcacgggtagacgatctagt 9201405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 31966013 - 31965978
Alignment:
Q  118 tacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    ||||||||||||||| ||||||||||||||||||||    
T  31966013 tacaatgtatatgacccgtgcggcagcacgggtgga 31965978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 32225620 - 32225581
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagttt 164  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  32225620 tatatgacccgtgcggcagcaccggtggacgatctagttt 32225581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 53143327 - 53143260
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagttt 164  Q
    |||| ||||||||| || |  ||||||||||||||| |||||||||||||||||| |  |||||||||    
T  53143327 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgaaaaatctagttt 53143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 17558862 - 17558824
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  17558862 tatatgacccgtgcggcagcacgggtagacgatctagtt 17558824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 35903632 - 35903678
Alignment:
Q  96 ttttgcttttgtctactacacttacaatgtatatgactcgtgcggca 142  Q
    |||||||||||||||||||| |||| ||||||||||  |||||||||    
T  35903632 ttttgcttttgtctactacatttacgatgtatatgatccgtgcggca 35903678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 37340669 - 37340614
Alignment:
Q  95 attttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtg 151  Q
    |||||||||||||||||||   ||||| |||||||||| |||||| |||||||||||    
T  37340669 attttgcttttgtctactatt-ttacattgtatatgacccgtgcgtcagcacgggtg 37340614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 41387290 - 41387346
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||| ||||||||||| ||||    
T  41387290 tttgtttttgtctactatatctacaatgtatatgacccgtacggcagcacggatgga 41387346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 31572364 - 31572506
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31572364 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaatgttgcttttgtctactaca 31572463  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatc 158  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  31572464 cttacaatgtatatgacccgtgcggcagcacgggtggatgatc 31572506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 31424173 - 31424229
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  31424173 tttgtttttgtctactacatctacaatgtatatgactcgtgcggcagcacgggtgga 31424229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 8700425 - 8700481
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  8700425 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 8700481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 19596428 - 19596372
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  19596428 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 19596372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 6120716 - 6120772
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  6120716 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 6120772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 18351715 - 18351771
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  18351715 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 18351771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 27944861 - 27944805
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  27944861 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 27944805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 41664674 - 41664730
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  41664674 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 41664730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 44902245 - 44902301
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  44902245 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 44902301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 20544989 - 20545045
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||| | |  ||||||||||||||| ||||||||||||||||||||    
T  20544989 tttgtttttgtctaccatatctacaatgtatatgacccgtgcggcagcacgggtgga 20545045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 41663401 - 41663457
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| | ||||||||||||||||||    
T  41663401 tttgtttttgtctactatatctacaatgtatatgacccatgcggcagcacgggtgga 41663457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 42442128 - 42442184
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||| ||||||||||    
T  42442128 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcaacacgggtgga 42442184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 22136316 - 22136279
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  22136316 tatatgacccgtgcggcaacacgggtggacgatctagt 22136279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 36279519 - 36279478
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgc 138  Q
    |||| ||||||||||||||  |||||||||||||||||||||    
T  36279519 tttgtttttgtctactacatctacaatgtatatgactcgtgc 36279478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 692267 - 692227
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtg 137  Q
    |||| |||||||||||||| |||||||||||||||| ||||    
T  692267 tttgtttttgtctactacatttacaatgtatatgacccgtg 692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 30096422 - 30096275
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  30096422 gaatcaattatacaatttccttctatagttgtatttcaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctacaata 30096323  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagtt 163  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  30096322 cttacaatgtatatgatccgtgcggcagcacgggtggacgatctagtt 30096275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 30088834 - 30088702
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||| |||||||||| | |    
T  30088834 gaatcaattatacaatttccttctatagttgtatttaaaattat--------------aagttgggactgtattataaaattttgtttttgtctacaata 30088749  T
Q  116 cttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  30088748 cttacaatgtatatgacccgtgcggcagcacggatggacgatctagt 30088702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 26410463 - 26410559
Alignment:
Q  172 ttgtgggactaacccgaaagtcgatagcagaacattcattaattgtttac---------tgtactttttaaatcaacgactcaaagaatcaaactca 259  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||         |||||||||||||||| |||||||||||||||||||||    
T  26410463 ttgtgggactaacccgaaagtcgatagcggaacattcattaattgtttacatatgattatgtactttttaaatcagcgactcaaagaatcaaactca 26410559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 25099301 - 25099236
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||| ||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  25099301 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggacgatctagt 25099236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 25158391 - 25158326
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||| ||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  25158391 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggacgatctagt 25158326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 8179864 - 8179762
Alignment:
Q  52 aaaattatgacattaaaattataagttgggactgtatta-taaaattttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggt 150  Q
    ||||| ||||||||||||||||||||||  | ||  ||| |||| ||||||||| ||||||||||  |||||| |||||||  |||||||||||||||||    
T  8179864 aaaatgatgacattaaaattataagttgtaattgagttattaaacttttgctttggtctactacatctacaatatatatgatccgtgcggcagcacgggt 8179765  T
Q  151 gga 153  Q
    |||    
T  8179764 gga 8179762  T

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Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 20655114 - 20655058
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  20655114 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 20655058  T

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Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 33375928 - 33375984
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  33375928 tttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtgga 33375984  T

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Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 2399007 - 2398951
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  2399007 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 2398951  T

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Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 10729507 - 10729451
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  10729507 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 10729451  T

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Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 16526371 - 16526315
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  16526371 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 16526315  T

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Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 20874852 - 20874908
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  20874852 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 20874908  T

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Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 34107403 - 34107347
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  34107403 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 34107347  T

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Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 34110816 - 34110872
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  34110816 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 34110872  T

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Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 38246930 - 38246874
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  38246930 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 38246874  T

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Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 40177205 - 40177261
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  40177205 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 40177261  T

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Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 16349752 - 16349713
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagttt 164  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  16349752 tatatgacccgtgcggcagcacgggtggacgatctagttt 16349713  T

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Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 4082591 - 4082628
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4082591 tatatgacccgtgcggcagcacgggtggacgatctagt 4082628  T

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Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 1396153 - 1396209
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||| |||||  | ||||||||||||| ||||||||||||||||||||    
T  1396153 tttgtttttgtctgctacatctgcaatgtatatgacccgtgcggcagcacgggtgga 1396209  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 40951487 - 40951524
Alignment:
Q  125 tatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  40951487 tatatgacccgtgcggcagcacgggtagacgatctagt 40951524  T

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Target: scaffold0051 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 10370 - 10254
Alignment:
Q  16 gaatcaattatacaatttccttctatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactaca 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10370 gaatcaattatacaatttccttctatagttgtgtttaaaattatgacattaaaattataagttgggactatattataaaattttgcttttgtctactaca 10271  T
Q  116 cttacaatgtatatgac 132  Q
    |||||||| ||||||||    
T  10270 cttacaatatatatgac 10254  T

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Target: scaffold0007 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 79195 - 79105
Alignment:
Q  39 tatagttgtatttaaaattatgacattaaaattataagttgggactgtattataaaattttgcttttgtctactacacttacaatgtatat 129  Q
    |||||||||||| ||||| ||||||||||| ||||||||| ||| ||   ||| ||||||||||||||||||||||| |||||||||||||    
T  79195 tatagttgtattcaaaatcatgacattaaagttataagtttggattgcgctattaaattttgcttttgtctactacatttacaatgtatat 79105  T

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Target: scaffold0515 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 6121 - 6061
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||||||||||  |||||||    
T  6121 ttttgtctacaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6061  T

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Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 6131 - 6071
Alignment:
Q  102 ttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtggacgatctagt 162  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||||||||||  |||||||    
T  6131 ttttgtctacaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6071  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 46438 - 46494
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  46438 tttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtgga 46494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 19511 - 19567
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||||||||  ||||||||||| ||| ||| ||||||||||||||||    
T  19511 tttgtttttgtctactacatctacaatgtataggacccgtacggcagcacgggtgga 19567  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 149115 - 149059
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| |||||||||||| |  |||||| |||||||| ||||||||||||||||||||    
T  149115 tttgtttttgtctactatatctacaatttatatgacccgtgcggcagcacgggtgga 149059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 5343 - 5287
Alignment:
Q  97 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggtgga 153  Q
    |||| ||||||||| || |  ||||||||||||| | ||||||||||||||||||||    
T  5343 tttgtttttgtctattatatctacaatgtatatgtcccgtgcggcagcacgggtgga 5287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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