View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1435_low_99 (Length: 256)
Name: NF1435_low_99
Description: NF1435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1435_low_99 |
 | |
|
| [»] scaffold0573 (1 HSPs) |
| | |
|
| [»] scaffold0054 (1 HSPs) |
| | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0014 (3 HSPs) |
| | |
|
| [»] scaffold0572 (1 HSPs) |
| | |
|
| [»] scaffold0429 (1 HSPs) |
| | |
|
| [»] scaffold0051 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 37)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 24890328 - 24890086
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
24890328 |
ttcctaatgtggtaacttacagttcccttattgatggtttgtgtaaattggggagaatcttttatgctttgaagctagtcgatgagatgcatgatagagg |
24890229 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| || | ||||||||||||||||||||||||||| || |
|
|
| T |
24890228 |
tcagccacctaatatagttacttacagttctatattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaacaaatttgaaagac |
24890129 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttatca |
242 |
Q |
| |
|
|| |||||| ||||| ||||||||| |||||| |||||||||| |
|
|
| T |
24890128 |
cagggtattcgaccagatatgtacacatacaccattcttatca |
24890086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 28926629 - 28926389
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28926629 |
ttcctaatgtggtaacttacaattcccttatcgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagagg |
28926530 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||| |||| || | |||||||||||||||||||| |||||| || |
|
|
| T |
28926529 |
tcaaccacctgatataattacttacagttctctattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaagac |
28926430 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| ||| || |||||||||||||| ||||||||||||||| |
|
|
| T |
28926429 |
cagggtcttcaaccaaatatgtacacatacactattcttat |
28926389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 31000016 - 30999838
Alignment:
| Q |
5 |
taatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaa |
104 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31000016 |
taatgtgttaatttacagtttccttattgatggtttgtgtaaatcggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaa |
30999917 |
T |
|
| Q |
105 |
ccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattat |
183 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
30999916 |
ccacctaatatagttatttacagttctatattggatgctttatgcaaaaaccatcgtgttgaccaggcaattgcattat |
30999838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 24730772 - 24731014
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| ||||||||| || |||||| ||||||||| |||||||||||| |||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
24730772 |
ttcctaatgtggtaacttacaattcccttattgatggtttgggtaaattggggaaaatctcttgtgtgttgaagctagtcgatgagatgcatgatagagg |
24730871 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||| || | ||||||||||||||||||||||||||| || |
|
|
| T |
24730872 |
tcaaccacctaatataataacttacaattctatattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaacaaatttgaaagac |
24730971 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttatca |
242 |
Q |
| |
|
|| |||||| ||||| ||||||||| ||||||| ||||||||| |
|
|
| T |
24730972 |
cagggtattcgaccagatatgtacacatacactgttcttatca |
24731014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 29358061 - 29357819
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||| ||| |||||||||||| |||||| |||||||| ||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
29358061 |
ttcctaacgtggtaacttacagttcccttattgatggtttatgtaaatcggggaaaatctcttatgctttgaagctagtggatgagatgcatgatagagg |
29357962 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||| ||||||||| | ||||| || |
|
|
| T |
29357961 |
tcaaccacctaatatagttacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaatgcaattgcgttattaacacagatgaaaaac |
29357862 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttatca |
242 |
Q |
| |
|
|| |||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
29357861 |
cagggtattcaaccaaatatgtacacatacactattcttatca |
29357819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29887214 - 29887454
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || ||||||| |||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29887214 |
ttcctgatgtggtaacttacaattcccttatcaatggtttgtgcaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagagg |
29887313 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| |||| ||||||||||| |||||||||| ||| || | |||||||| |||||||||||||||||| || |
|
|
| T |
29887314 |
tcaaccacctgatataattacttacagttctttattagatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaatttgaaagac |
29887413 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
29887414 |
cagggtattcgaccaaatatgtacacatacactattcttat |
29887454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29073680 - 29073920
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| | ||||||| || ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29073680 |
ttcctaatgtggtgacttacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagagg |
29073779 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||| |||||| || |
|
|
| T |
29073780 |
tgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaaattgaaagac |
29073879 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| |||||| |||| ||| ||||||||||||||| |
|
|
| T |
29073880 |
caaggtattcgaccaactatgcacacatacactattcttat |
29073920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29078444 - 29078684
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| | ||||||| || ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29078444 |
ttcctaatgtggtgacttacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagagg |
29078543 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||| |||||| || |
|
|
| T |
29078544 |
tgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaaattgaaagac |
29078643 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| |||||| |||| ||| ||||||||||||||| |
|
|
| T |
29078644 |
caaggtattcgaccaactatgcacacatacactattcttat |
29078684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29106253 - 29106493
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| | ||||||| || ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29106253 |
ttcctaatgtggtgacttacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagagg |
29106352 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||| |||||| || |
|
|
| T |
29106353 |
tgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaaattgaaagac |
29106452 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| |||||| |||| ||| ||||||||||||||| |
|
|
| T |
29106453 |
caaggtattcgaccaactatgcacacatacactattcttat |
29106493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29835132 - 29835372
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | || |
|
|
| T |
29835132 |
ttcctgatgtggtaacttacaattcccttattgatggtttgtgtaaattggggaaaatctcttatgctttgaagctagttgatgagatgcatgatcgggg |
29835231 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||| ||||||||||| |||||| || |
|
|
| T |
29835232 |
tgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaaattgaaagac |
29835331 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
29835332 |
cagggtattcgaccaaatatgtacacatacactattcttat |
29835372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29894470 - 29894710
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | || |
|
|
| T |
29894470 |
ttcctgatgtggtaacttacaattcccttattgatggtttgtgtaaattggggaaaatctcttatgctttgaagctagttgatgagatgcatgatcgggg |
29894569 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||| ||||||||||| |||||| || |
|
|
| T |
29894570 |
tgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaaattgaaagac |
29894669 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
29894670 |
cagggtattcgaccaaatatgtacacatacactattcttat |
29894710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 29211443 - 29211235
Alignment:
| Q |
33 |
gatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttcta |
132 |
Q |
| |
|
|||| ||| ||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
29211443 |
gatgttttttgtaaatcggggaaaatctcttatgctttgaagctagtggatgagatgcatgatagaggtcaaccacctaatatagttacttacagttcta |
29211344 |
T |
|
| Q |
133 |
tattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaataccacggtatttgaccaaatatgtaca-atacac |
231 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||| || | ||| |||||||||||||||| |||||| |||| |||||| ||||||||||| ||| |||||| |
|
|
| T |
29211343 |
tattggatgctttatgcaaaacccatcgggttgacaaggcagttgcattattaacaaaattgaaagaccaaggtattcgaccaaatatgcacacatacac |
29211244 |
T |
|
| Q |
232 |
tattcttat |
240 |
Q |
| |
|
||||||||| |
|
|
| T |
29211243 |
tattcttat |
29211235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29866566 - 29866806
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || |||||| ||||||||||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||| | || |
|
|
| T |
29866566 |
ttcctgatgtggtaacttacaattcccttattgatggtttgtgcaaatcggggaaaatctcttatgctttgaagctagttgatgagatgcatgatcgggg |
29866665 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||| |||||||||||||||||| || |
|
|
| T |
29866666 |
tgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaatttgaaagac |
29866765 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
29866766 |
cagggtattcgaccaaatatgtacacatacactattcttat |
29866806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29905556 - 29905796
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || ||||||||||||||||||||||| || | ||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
29905556 |
ttcctgatgtggtaacttacaattcccttatcgatggtttgtgtaaatctggaaaaatctcttatgctttgaagctagttgatgagatgcatgatagagg |
29905655 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||| ||| ||| || | ||||| ||||||||||||| |||||| || |
|
|
| T |
29905656 |
tcagccacctgatataattacttagagttctatattggatgctttatgcaaaaactatcaggttgacaaggcaatcacattattaacaaaattgaaagac |
29905755 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
| |||||| |||||||||||||| |||||| |||||||| |
|
|
| T |
29905756 |
ctgggtattcaaccaaatatgtacacatacaccattcttat |
29905796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 30118823 - 30118583
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || ||||||||||||||||||||||| || | ||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
30118823 |
ttcctgatgtggtaacttacaattcccttatcgatggtttgtgtaaatctggaaaaatctcttatgctttgaagctagttgatgagatgcatgatagagg |
30118724 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||| ||| ||| || | ||||| ||||||||||||| |||||| || |
|
|
| T |
30118723 |
tcagccacctgatataattacttagagttctatattggatgctttatgcaaaaactatcaggttgacaaggcaatcacattattaacaaaattgaaagac |
30118624 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
| || ||| |||||||||||||| |||||| |||||||| |
|
|
| T |
30118623 |
ctgggaattcaaccaaatatgtacacatacaccattcttat |
30118583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 237
Target Start/End: Complemental strand, 30062071 - 30061840
Alignment:
| Q |
7 |
atgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaacc |
106 |
Q |
| |
|
||||| || |||||| || |||||| |||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30062071 |
atgtggtagcttacaattcccttattgatggtttttgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagaggtcaacc |
30061972 |
T |
|
| Q |
107 |
acctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaataccacggt |
206 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| ||| ||||| | || || | ||||| |||||||| |||| |||||| | || ||| |
|
|
| T |
30061971 |
acctaatataattacttacaattctatattggatgctttatgcaaacgccatcatcttgacaaggcaatcacattattatcaaaattgaaagatcagggt |
30061872 |
T |
|
| Q |
207 |
atttgaccaaatatgtaca-atacactattct |
237 |
Q |
| |
|
||| ||| ||||| |||| |||||||||||| |
|
|
| T |
30061871 |
attcaaccgaatatttacacatacactattct |
30061840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 29897994 - 29898152
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || |||||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
29897994 |
ttcctgatgtggtaacttacaattctcttatcgatggtttgtgtaaattggggaaattctcttacgcgttgaagctagtcgatgagatgcatgatagagg |
29898093 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
159 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
29898094 |
tcaaccacctaatataattacgtacagttctatattgaatgctttatgcaaaaaccatc |
29898152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 30060244 - 30060007
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| |||| |||| || |||||| |||||| | ||||||| ||||| ||||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
30060244 |
ttcctgatgtggtaacatacaattcccttattgatggtatctgtaaatcggggaaaatctcttatgctttaaagctagtcgatgagatgaatgatagagg |
30060145 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
||||| |||| ||||| |||||||| ||||||||| |||||||||| |||||||||| ||| || | |||||||||||||||||||| |||||| || |
|
|
| T |
30060144 |
tcaactacctgatataattacttacaattctatattaaatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaaattgaaagac |
30060045 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattct |
237 |
Q |
| |
|
|| ||||| |||||||||| |||| | |||||||||| |
|
|
| T |
30060044 |
cagggtatccgaccaaatatttacacacacactattct |
30060007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 30127137 - 30126897
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||| |||| |||||| |||||||| ||||||| || || ||||||| ||||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
30127137 |
ttcctgatgtggtaacttatagttcccttattgatggtttctgtaaatcggagaaaatctctcatgctttgaatctagtcaatgagatgcatgatagagg |
30127038 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||||||||| ||||| || ||||| ||||||||||||||||||||| |||||||||| ||| || | ||||||||||| ||||| || || ||| || |
|
|
| T |
30127037 |
tcaaccacctgatataattatttacaattctatattggatgctttatgcaaaaaccatcaggttgacaaagcaattgcattgttaacgaaatttaaaaac |
30126938 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| ||||| | |||||| ||||||||||||||| |
|
|
| T |
30126937 |
cagggtattcaaccaagtgtgtacacatacactattcttat |
30126897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 29366503 - 29366345
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29366503 |
ttcctgatgtggtaacttacaattcccttattgatggtttgtgtaaattggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagagg |
29366404 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
159 |
Q |
| |
|
| ||||| | ||| | |||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
29366403 |
tgtaccacatgataaaattacttacaattctatattggatgctttatgcaaaaaccatc |
29366345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 29348680 - 29348440
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || |||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29348680 |
ttcctgatgtggtaacttacaattcccttattgatggtttgtgtaaatcagggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagagg |
29348581 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| ||||| | ||| | |||||||| ||||||||||||||||||||| |||||||||| ||| || | |||||||| || ||||| || ||||| | |
|
|
| T |
29348580 |
tgtaccacatgataaaattacttacaattctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttgttaacgaagatgaaagat |
29348481 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
| || ||| |||| ||||||||| ||||||||||||||| |
|
|
| T |
29348480 |
gaaggaattcaaccagatatgtacacatacactattcttat |
29348440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29929190 - 29929430
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||| ||| |||||||||||| ||||| |||| ||||||||||| |||||| || |||| |||||| |||||||||||||||| |
|
|
| T |
29929190 |
ttcctgatgtgataacttatagtgcccttatcgatggattgtgcaaatcagggagaatctcatatgctttgcagcttgtcgatcagatgcatgatagagg |
29929289 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| | |||||||||||| |||||||| ||||||||| ||||||||||| |||| ||||| ||| || | ||||||||||| ||||| || || ||| || |
|
|
| T |
29929290 |
tgtagcacctaatatagttacttacaattctatattagatgctttatgcaaaacccatcaggttgacaaagcaattgcattgttaacgaaattcaaagac |
29929389 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| ||||| | |||||| ||||||||||||||| |
|
|
| T |
29929390 |
cagggtattcaaccaagtgtgtacacatacactattcttat |
29929430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 25451035 - 25451181
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| |||||||||||| |||| | ||||||||||| |||| || |||||| || ||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
25451035 |
ttcctgatgtggtaacttacagttcccttgttgatggtttgtgcaaatcggagagaattcctaatgctttgaagcttgtcgatgagatgcatgatagagg |
25451134 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttat |
147 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25451135 |
tcaaccaccaaatatatttacttacagttctatattggatgctttat |
25451181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 29116190 - 29116420
Alignment:
| Q |
13 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
112 |
Q |
| |
|
|||||||||||| |||||| |||||||| | |||| ||||||||||| |||||| || |||| |||||| ||||||||||||||||| |||||||| |
|
|
| T |
29116190 |
taacttacagttcccttattgatggtttaagcaaatcagggagaatctcatatgctttgcagcttgtcgatcagatgcatgatagaggtgtaccacctac |
29116289 |
T |
|
| Q |
113 |
tatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaataccacggtatttga |
212 |
Q |
| |
|
|||| |||||||| ||||||||| ||||||||||| |||| ||||| ||| || | ||||||||||| ||||| || |||||| || | |||||| | |
|
|
| T |
29116290 |
tatacgtacttacaattctatattagatgctttatgcaaaatccatcaagttgacaaagcaattgcattgttaacgaaattgaaagacaagggtattcaa |
29116389 |
T |
|
| Q |
213 |
ccaaatatgtaca-atacactattcttatca |
242 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |
|
|
| T |
29116390 |
ccaaatatgtacacatacagtattcttatca |
29116420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29882352 - 29882590
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||| ||| |||||||||||| ||||| |||| || ||||| || |||||| || | || |||||||||||||||||| |||| |
|
|
| T |
29882352 |
ttcctgatgtgataacttatagtgcccttatcgatggattgtgcaaatctggaagaatatcatatgctttggaacttgtcgatgagatgcatgatcgagg |
29882451 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||| |||| ||||| ||| |||| ||||||||||||||||||||| ||||| |||| |||| || | |||||||||||||||||||| |||||| | |
|
|
| T |
29882452 |
gcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgttgacaaagcaattgcattattaacaaaattgaaaggc |
29882551 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattctt |
238 |
Q |
| |
|
|| |||||| ||||| ||||| ||| ||||||||||||| |
|
|
| T |
29882552 |
caaggtattcgaccagatatgaacacatacactattctt |
29882590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29909508 - 29909746
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||| ||| |||||||||||| ||||| |||| || ||||| || |||||| || | || |||||||||||||||||| |||| |
|
|
| T |
29909508 |
ttcctgatgtgataacttatagtgcccttatcgatggattgtgcaaatctggaagaatatcatatgctttggaacttgtcgatgagatgcatgatcgagg |
29909607 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||| |||| ||||| ||| |||| ||||||||||||||||||||| ||||| |||| |||| || | |||||||||||||||||||| |||||| | |
|
|
| T |
29909608 |
gcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgttgacaaagcaattgcattattaacaaaattgaaaggc |
29909707 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattctt |
238 |
Q |
| |
|
|| |||||| ||||| ||||| ||| ||||||||||||| |
|
|
| T |
29909708 |
caaggtattcgaccagatatgaacacatacactattctt |
29909746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 29946354 - 29946543
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| ||||||||| || |||||| |||||||||| | || |||||||||||| |||||| || |||| |||||||| |||||||||||||| |
|
|
| T |
29946354 |
ttcctaatgtggtaacttacaattcccttattaatggtttgtgcagatcggggagaatctcatatgctttggagcttgtcgatgaaatgcatgatagagg |
29946453 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaa |
190 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||| |||||| || ||| || |||| || | ||||||| ||| |||||||| |
|
|
| T |
29946454 |
tcaaccacctaatataattacttacaactctatattggatgttttatgcaagaactatgatgttgacaaggcaattgtatttttaacaaa |
29946543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 24263834 - 24263594
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| ||||||| | || |||||| ||||| ||||| |||| || ||||| || |||||| || | || ||||| |||||||||| |||| |
|
|
| T |
24263834 |
ttcctaatgtgataacttataattcccttattgatggattgtgcaaatctggaagaatatcatatgctttggaacttatcgatttgatgcatgatcgagg |
24263735 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||| |||| ||||| || |||||||||||||||||||| ||||| |||||||||| ||| || | |||||||||||||||| ||| |||||| || |
|
|
| T |
24263734 |
gcaacaacctgatataatcacgtacagttctatattggatgccttatgcaaaaaccatctggttgacaaggcaattgcattattaataaaattgaaagac |
24263635 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
24263634 |
cagggtattcgaccaaatatgtacacatacactattcttat |
24263594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 29099272 - 29099446
Alignment:
| Q |
13 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
112 |
Q |
| |
|
|||||||||||| |||||| |||||||| | |||| ||||||||||| |||||| || |||| |||||| ||||||||||||||||| ||||||||| |
|
|
| T |
29099272 |
taacttacagttcccttattgatggtttaagcaaatcagggagaatctcatatgctttgcagcttgtcgatcagatgcatgatagaggtgtaccacctaa |
29099371 |
T |
|
| Q |
113 |
tatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaac |
187 |
Q |
| |
|
|||| |||||||| ||||||||| ||||||||||| |||| ||||| ||| || | ||||||||||| ||||| |
|
|
| T |
29099372 |
tatatgtacttacaattctatattagatgctttatgcaaaacccatcaagttgacaaagcaattgcattgttaac |
29099446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 24886561 - 24886406
Alignment:
| Q |
87 |
atgcatgatagaggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaa |
186 |
Q |
| |
|
||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||| |||||||||| ||| | |||||||||||||||| |
|
|
| T |
24886561 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattggatgctttatg-aaaaaccatcatgtgacaaaggcaattgcattattaa |
24886463 |
T |
|
| Q |
187 |
caaatttgaaataccacggtatttgaccaaatatgtaca-atacactattcttatca |
242 |
Q |
| |
|
|||| |||||| |||| |||||| ||||| ||||||||| |||||||||| |||||| |
|
|
| T |
24886462 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatttttatca |
24886406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29084935 - 29085175
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| | ||||||| || ||||| |||||||| | |||| ||||||||||| |||||| || |||| |||||| |||||||||||||||| |
|
|
| T |
29084935 |
ttcctaatgtggtgacttacaattctcttattgatggtttaagcaaatcagggagaatctcatatgctttgcagcttgtcgatcagatgcatgatagagg |
29085034 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| ||||||||||||| |||||||| ||||||| | |||||||||| |||| ||||| ||| || | ||||||||||| |||| || || ||| || |
|
|
| T |
29085035 |
tgtaccacctaatatacttacttacaattctataatagatgctttattcaaaacccatcaagttgacaaagcaattgcattgataacgaaatttaaagac |
29085134 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| |||||| ||||| ||||||| ||||||||||||||| |
|
|
| T |
29085135 |
cagggtattcaaccaagcatgtacacatacactattcttat |
29085175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 78 - 238
Target Start/End: Original strand, 29903240 - 29903401
Alignment:
| Q |
78 |
gtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattg |
177 |
Q |
| |
|
|||||||||||||||||| |||| |||| |||| ||||| ||| |||| ||||||||||||||||||||| ||||| |||| || | | | ||||||| |
|
|
| T |
29903240 |
gtcgatgagatgcatgatcgagggcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgctggcaaagcaattg |
29903339 |
T |
|
| Q |
178 |
cattattaacaaatttgaaataccacggtatttgaccaaatatgtaca-atacactattctt |
238 |
Q |
| |
|
| ||||||||||| |||||| |||| |||||| ||||||||||| ||| |||||| |||||| |
|
|
| T |
29903340 |
cgttattaacaaaattgaaagaccagggtattcgaccaaatatgaacacatacaccattctt |
29903401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29889647 - 29889887
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| | ||||||| || ||||| |||||||| | |||| |||| |||||| |||| | || |||| |||||| |||||||||||||||| |
|
|
| T |
29889647 |
ttcctaatgtggtgacttacaattctcttattgatggtttaagcaaatcagggataatctcatatgttttgcagcttgtcgatcagatgcatgatagagg |
29889746 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
| |||||||||||||| ||||||| ||||||||| ||||||||||| |||| ||||| ||| || | |||||||||| | ||| || || ||| || |
|
|
| T |
29889747 |
tgtaccacctaatatagtcacttacaattctatattagatgctttatgcaaaacccatcaggttgacaaaacaattgcattgtcaacgaaatttaaagac |
29889846 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| ||||| ||||||| |||| | ||||||||||||||| |
|
|
| T |
29889847 |
cagagtattcaaccaaatgtgtaaacatacactattcttat |
29889887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 29876757 - 29876894
Alignment:
| Q |
16 |
cttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatat |
115 |
Q |
| |
|
|||| |||| |||||| |||||||| || |||| ||||||||| | | ||| || |||| || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
29876757 |
cttatagttcccttattgatggtttttgcaaatcggggagaattccacaggctttggagcttgttgatgagatgcatgatagaggccaaccacctaatat |
29876856 |
T |
|
| Q |
116 |
agatacttacagttctatattggatgctttatgtaaaa |
153 |
Q |
| |
|
| |||||||| |||||||||| |||||||||| |||| |
|
|
| T |
29876857 |
aattacttacaattctatattgtatgctttatgcaaaa |
29876894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 24272029 - 24271871
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| ||||||| |||| |||||| ||||| ||||| |||| || ||||| || |||||| || | || |||||||||||||||| |||| |
|
|
| T |
24272029 |
ttcctaatgtgataacttatagttcccttattgatggattgtgcaaatctggaagaatatcatatgctttggaacttaacgatgagatgcatgatcgagg |
24271930 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
159 |
Q |
| |
|
|||| |||| ||||| || ||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
24271929 |
gcaacaacctgatataatcacgtacagttctatattggatgatttatgcaaaaaccatc |
24271871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 30135122 - 30135200
Alignment:
| Q |
81 |
gatgagatgcatgatagaggtcaaccacctaatatagat-acttacagttctatattggatgctttatgtaaaaaccatc |
159 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| | ||| ||||||| |||| ||||||||||||| || |||||||||| |
|
|
| T |
30135122 |
gatgagatgcatgaaagaggtcaacctgctaatgt-gatcacttacaattctttattggatgctttgtgcaaaaaccatc |
30135200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 16702153 - 16702057
Alignment:
| Q |
85 |
agatgcatgatagaggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcatt |
181 |
Q |
| |
|
|||||| ||||||||| ||||| || ||| || ||||||| ||| |||| ||||||||||||||||||||| |||| || | ||||||||||| |
|
|
| T |
16702153 |
agatgcgtgatagaggccaacctcccaatgtaatcacttacaattccttattacatgctttatgtaaaaaccatcatgttgacaaggcaattgcatt |
16702057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0573 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0573
Description:
Target: scaffold0573; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4054 - 4294
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4054 |
ttcctaatgtggtaacttacaattcccttatcgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagagg |
4153 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||| | | || | |||||||||||||||||||| |||||| || |
|
|
| T |
4154 |
tcaaccacctgatataattacttacagttctctattggatgctttatgcaaaaaccatccaggtgacaaggcaattgcattattaacaaaattgaaagac |
4253 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattcttat |
240 |
Q |
| |
|
|| ||| || |||||||||||||| ||||||||||||||| |
|
|
| T |
4254 |
cagggtcttcaaccaaatatgtacacatacactattcttat |
4294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 53678 - 53532
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||||| || |||||| |||||||||||||||| ||||| ||| ||||||||| | |||||||| ||||||||||||||||||| |
|
|
| T |
53678 |
ttcctgatgtggtaacttacaattcccttattgatggtttgtgtaaatcggggaaaatatcttatgctttccagctagtcaatgagatgcatgatagagg |
53579 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttat |
147 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
53578 |
tcaaccacctaatataattacttacaattctatattaaatgctttat |
53532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 24219292 - 24219128
Alignment:
| Q |
26 |
ccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttac |
125 |
Q |
| |
|
|||||| ||||||||||| |||| ||| |||||||| |||||| |||| || ||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
24219292 |
ccttattgatggtttgtgcaaatcgggaagaatctcatatgctttgaaacttatcggagagatgcatgatagaggtcaaccacctaatataattacttac |
24219193 |
T |
|
| Q |
126 |
agttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaa |
190 |
Q |
| |
|
| |||| |||||||||||||||| |||||||||| |||| || | ||||||| ||| |||||||| |
|
|
| T |
24219192 |
aattctttattggatgctttatgcaaaaaccatcatgttgacaaggcaattgaattgttaacaaa |
24219128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 11991261 - 11991410
Alignment:
| Q |
33 |
gatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttcta |
132 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||| | |||| || ||||| |||||||||| ||||||||| | |||||| ||||||| | | |
|
|
| T |
11991261 |
gatggtttgtgcaaatcagggagaatctcctatgcttgggagcttgttgatgaaatgcatgataatggtcaaccagccaatatattcacttacaactgtt |
11991360 |
T |
|
| Q |
133 |
tattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcatta |
182 |
Q |
| |
|
|| | |||||||||||||||||||||| |||| |||| || ||||||||| |
|
|
| T |
11991361 |
taatagatgctttatgtaaaaaccatcatgttgaccaggctattgcatta |
11991410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 24226819 - 24226895
Alignment:
| Q |
83 |
tgagatgcatgatagaggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
159 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||| ||||||| |||| |||| |||| || || |||||||||| |
|
|
| T |
24226819 |
tgagatgcatgatagaggtcaaccagctaacataatcacttacaattctttattagatggattgtgcaaaaaccatc |
24226895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 22260 - 22498
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
||||| ||||| ||||||| |||| |||||||||||| ||||| |||| || ||||| || |||||| || | || ||||||||||||||| || |||| |
|
|
| T |
22260 |
ttcctgatgtgataacttatagttcccttatcgatggattgtgcaaatctggaagaatatcatatgctttggaacttgtcgatgagatgcattatcgagg |
22359 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
200 |
Q |
| |
|
|||| |||| ||||| |||||||| ||||||||||||||||||||| ||||| |||| ||| || | |||||| ||||||||||||| |||||| | |
|
|
| T |
22360 |
gcaacaacctgatataattacttacaattctatattggatgctttatgcaaaaaacatcatgtggacaaagcaattacattattaacaaaattgaaaggc |
22459 |
T |
|
| Q |
201 |
cacggtatttgaccaaatatgtaca-atacactattctt |
238 |
Q |
| |
|
|| |||||| ||||| ||||| ||| |||||| |||||| |
|
|
| T |
22460 |
caaggtattcgaccagatatgaacacatacaccattctt |
22498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 15062958 - 15062769
Alignment:
| Q |
1 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
100 |
Q |
| |
|
|||| |||||| ||||||||| || |||| | |||||||||||||||| || |||| ||| | |||| || |||| |||||||| |||||||||||||| |
|
|
| T |
15062958 |
ttccaaatgtggtaacttacaattcccttgttgatggtttgtgtaaatctggaagaacctcgtgtgctttggagcttgtcgatgaaatgcatgatagagg |
15062859 |
T |
|
| Q |
101 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaa |
190 |
Q |
| |
|
||||||| |||||||| |||||||| ||||||||| |||||| |||| |||||| ||| |||| | | ||||||| ||||||||||| |
|
|
| T |
15062858 |
tcaaccatctaatataattacttacaattctatattagatgctatatgcaaaaacaatcatgttgataaggcaattgtgttattaacaaa |
15062769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 104808 - 104666
Alignment:
| Q |
13 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
112 |
Q |
| |
|
|||||||||||| || || ||||||||||| |||| |||||| |||||| |||| | |||| || ||||||||||||| || |||||||||||||| |
|
|
| T |
104808 |
taacttacagttctctcattgatggtttgtgcaaatctgggagattctcttgtgcttgggagcttgtggatgagatgcatgttaatggtcaaccacctaa |
104709 |
T |
|
| Q |
113 |
tatagatacttacagttctatattggatgctttatgtaaaaac |
155 |
Q |
| |
|
||| ||||||||||||| || | ||||||||||| |||||| |
|
|
| T |
104708 |
catatttacttacagttctttaatagatgctttatgcaaaaac |
104666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 155
Target Start/End: Original strand, 137323 - 137445
Alignment:
| Q |
33 |
gatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttcta |
132 |
Q |
| |
|
||||||||||| |||| || |||||||| ||||| |||||| |||||||||||||||| || |||||||||||| | ||| ||| ||||||||| |
|
|
| T |
137323 |
gatggtttgtgcaaatcaggtagaatctcccatgcttggaagcttgtcgatgagatgcatgttaatggtcaaccacctgacatatttacctacagttctt |
137422 |
T |
|
| Q |
133 |
tattggatgctttatgtaaaaac |
155 |
Q |
| |
|
|| | ||||||||||| |||||| |
|
|
| T |
137423 |
taatagatgctttatgcaaaaac |
137445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 121550 - 121457
Alignment:
| Q |
13 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaacc |
106 |
Q |
| |
|
|||||||||||| ||||| |||| |||||| |||| |||||||||||| |||| | |||| | ||| |||||||||||||||||||||| |
|
|
| T |
121550 |
taacttacagttctcttattgatgctttgtgcaaatcagggagaatctctcatgcatgggagcttcttgatcagatgcatgatagaggtcaacc |
121457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0572 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0572
Description:
Target: scaffold0572; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 3182 - 3331
Alignment:
| Q |
33 |
gatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttcta |
132 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||| | |||| || |||||||||| |||||| ||||||||| || ||||| ||||||| ||| |
|
|
| T |
3182 |
gatggtttgtgcaaatctgggagaatctcctatgcttgggagcttgttgatgagatgcgtgatagtggtcaaccagctgatataatcacttacaattcat |
3281 |
T |
|
| Q |
133 |
tattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcatta |
182 |
Q |
| |
|
|| | ||||||||||| |||||||||| |||| || | || ||||||||| |
|
|
| T |
3282 |
taatagatgctttatgcaaaaaccatcatgttgacaaggctattgcatta |
3331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 4260374 - 4260242
Alignment:
| Q |
26 |
ccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttac |
125 |
Q |
| |
|
|||||| ||||||||||| |||| |||||| | || |||||| || | || || ||||| ||| ||||||||||| |||||||||||||| |||||| |
|
|
| T |
4260374 |
ccttattgatggtttgtgcaaatccgggagattatcatatgctatggaacttgttgatgaaatggatgatagaggtgaaccacctaatataattacttat |
4260275 |
T |
|
| Q |
126 |
agttctatattggatgctttatgtaaaaaccat |
158 |
Q |
| |
|
|| ||||| |||||| |||||| ||||||||| |
|
|
| T |
4260274 |
tgtcctatagtggatgttttatgcaaaaaccat |
4260242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 4263996 - 4263864
Alignment:
| Q |
26 |
ccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttac |
125 |
Q |
| |
|
|||||| ||||||||||| |||| |||||| | || |||||| || | || || ||||| ||| ||||||||||| |||||||||||||| |||||| |
|
|
| T |
4263996 |
ccttattgatggtttgtgcaaatccgggagattatcatatgctatggaacttgttgatgaaatggatgatagaggtgaaccacctaatataattacttat |
4263897 |
T |
|
| Q |
126 |
agttctatattggatgctttatgtaaaaaccat |
158 |
Q |
| |
|
|| ||||| |||||| |||||| ||||||||| |
|
|
| T |
4263896 |
tgtcctatagtggatgttttatgcaaaaaccat |
4263864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 10130066 - 10130201
Alignment:
| Q |
13 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
112 |
Q |
| |
|
||||||| |||| |||||| ||||| ||||| |||| ||||||||||| ||||| | | || || ||||||| |||||||||||||| |||||| |
|
|
| T |
10130066 |
taacttatagttcccttattgatggcttgtgcaaatcagggagaatctcagatgcttgggaacttgtaagtgagatgtctgatagaggtcaacaacctaa |
10130165 |
T |
|
| Q |
113 |
tatagatacttacagttctatattggatgctttatg |
148 |
Q |
| |
|
|||| |||||||| |||| ||||| |||||||||| |
|
|
| T |
10130166 |
tataattacttacaattctttattgaatgctttatg |
10130201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 17251310 - 17251342
Alignment:
| Q |
81 |
gatgagatgcatgatagaggtcaaccacctaat |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
17251310 |
gatgagatgcatgatagaggtcaaccacctaat |
17251342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0429
Description:
Target: scaffold0429; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 6125 - 6276
Alignment:
| Q |
13 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
112 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||| || |||||||| |||||| | || | || |||||||||| ||||| |||||||||||| | |
|
|
| T |
6125 |
taacttacagttctctcattgatggtttgtgtaaattaggtagaatctcctatgcttgggagtttgttgatgagatgcgtgataatggtcaaccacctga |
6224 |
T |
|
| Q |
113 |
tatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtt |
164 |
Q |
| |
|
||| ||||||| |||| || | ||||| ||||| |||||||||| |||| |
|
|
| T |
6225 |
catatgcacttacaattctttaatagatgcattatgcaaaaaccatcatgtt |
6276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 43355 - 43199
Alignment:
| Q |
13 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
112 |
Q |
| |
|
|||||||||||| || || ||||||||||| ||||| || |||||||| |||||| | |||| || |||||||||| ||| | ||||||| |||| | |
|
|
| T |
43355 |
taacttacagttctctcattgatggtttgtgcaaattaggtagaatctcctatgcttgggagcttgttgatgagatgcgtgacaatggtcaacaacctga |
43256 |
T |
|
| Q |
113 |
tatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttacca |
169 |
Q |
| |
|
||| ||||||| |||| || | ||||| ||||| |||||||||| |||| |||| |
|
|
| T |
43255 |
catatgcacttacaattctttaatagatgcattatgcaaaaaccatcatgttgacca |
43199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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