View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14361_high_1 (Length: 583)

Name: NF14361_high_1
Description: NF14361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14361_high_1
NF14361_high_1
[»] chr8 (39 HSPs)
chr8 (18-576)||(45547703-45548270)
chr8 (206-429)||(45540318-45540534)
chr8 (349-429)||(45540695-45540776)
chr8 (405-552)||(32924167-32924313)
chr8 (380-526)||(32975698-32975845)
chr8 (380-526)||(34286492-34286638)
chr8 (207-309)||(24504057-24504159)
chr8 (380-515)||(38895681-38895817)
chr8 (208-309)||(8444258-8444356)
chr8 (380-526)||(24350447-24350594)
chr8 (377-550)||(14942411-14942585)
chr8 (386-483)||(25465781-25465878)
chr8 (224-318)||(13089752-13089850)
chr8 (380-552)||(32131425-32131598)
chr8 (217-309)||(10230099-10230191)
chr8 (217-309)||(24581444-24581536)
chr8 (380-526)||(41145324-41145473)
chr8 (404-515)||(14724918-14725029)
chr8 (380-549)||(16972284-16972455)
chr8 (405-460)||(25333655-25333710)
chr8 (383-526)||(28879069-28879210)
chr8 (377-493)||(2563402-2563519)
chr8 (388-452)||(24087256-24087321)
chr8 (380-503)||(10298855-10298978)
chr8 (473-552)||(26046978-26047057)
chr8 (377-483)||(30974043-30974150)
chr8 (377-526)||(2669659-2669809)
chr8 (383-460)||(9131059-9131137)
chr8 (380-437)||(10213795-10213853)
chr8 (506-552)||(11988308-11988354)
chr8 (506-551)||(29713289-29713334)
chr8 (380-460)||(35055499-35055579)
chr8 (404-493)||(36907597-36907686)
chr8 (380-460)||(37410841-37410922)
chr8 (380-460)||(42102183-42102264)
chr8 (509-557)||(2669763-2669811)
chr8 (380-437)||(8752906-8752965)
chr8 (417-497)||(9782223-9782303)
chr8 (377-548)||(19925546-19925718)
[»] chr2 (32 HSPs)
chr2 (377-552)||(21788442-21788618)
chr2 (206-309)||(2702253-2702356)
chr2 (207-309)||(37647968-37648070)
chr2 (222-309)||(27271658-27271745)
chr2 (207-309)||(12410790-12410892)
chr2 (207-309)||(12422850-12422952)
chr2 (207-309)||(6764423-6764525)
chr2 (383-484)||(8832510-8832612)
chr2 (215-309)||(11031809-11031903)
chr2 (380-535)||(4004821-4004977)
chr2 (217-309)||(34394480-34394572)
chr2 (383-552)||(4026911-4027080)
chr2 (463-557)||(34913402-34913496)
chr2 (380-548)||(15155802-15155971)
chr2 (380-552)||(33321240-33321413)
chr2 (404-505)||(42064883-42064984)
chr2 (380-514)||(36501443-36501578)
chr2 (383-460)||(38216096-38216174)
chr2 (377-524)||(11776997-11777145)
chr2 (380-526)||(25836641-25836787)
chr2 (404-549)||(29774733-29774878)
chr2 (380-552)||(37409628-37409801)
chr2 (509-557)||(21788572-21788620)
chr2 (402-470)||(35731203-35731271)
chr2 (379-550)||(38471718-38471890)
chr2 (473-552)||(755764-755843)
chr2 (380-482)||(30382197-30382300)
chr2 (404-470)||(7480852-7480918)
chr2 (377-470)||(12950040-12950134)
chr2 (380-453)||(22898285-22898359)
chr2 (404-461)||(23956217-23956274)
chr2 (405-493)||(16108076-16108164)
[»] chr7 (33 HSPs)
chr7 (377-557)||(44613398-44613579)
chr7 (206-318)||(1032222-1032334)
chr7 (207-309)||(28782010-28782112)
chr7 (207-309)||(9948933-9949035)
chr7 (220-297)||(11621380-11621457)
chr7 (207-309)||(9942597-9942699)
chr7 (408-552)||(48021605-48021748)
chr7 (380-505)||(39279461-39279588)
chr7 (404-557)||(28759790-28759946)
chr7 (380-552)||(29390479-29390651)
chr7 (224-297)||(40871309-40871382)
chr7 (380-550)||(22032749-22032920)
chr7 (380-526)||(29378656-29378803)
chr7 (377-497)||(47654339-47654460)
chr7 (377-515)||(37465811-37465951)
chr7 (404-526)||(47648549-47648670)
chr7 (380-552)||(38372543-38372716)
chr7 (404-516)||(14691252-14691364)
chr7 (383-550)||(22575573-22575741)
chr7 (383-437)||(33204934-33204989)
chr7 (380-460)||(16932858-16932939)
chr7 (380-460)||(16938241-16938322)
chr7 (380-460)||(16958892-16958973)
chr7 (380-460)||(33288003-33288084)
chr7 (217-309)||(17193881-17193972)
chr7 (380-542)||(34922926-34923091)
chr7 (377-526)||(35809101-35809251)
chr7 (404-513)||(8180544-8180653)
chr7 (379-541)||(43391717-43391880)
chr7 (377-437)||(43818803-43818864)
chr7 (380-526)||(20888584-20888732)
chr7 (508-552)||(22515564-22515608)
chr7 (509-557)||(44613396-44613444)
[»] chr4 (47 HSPs)
chr4 (377-557)||(41228883-41229064)
chr4 (207-309)||(43499300-43499402)
chr4 (206-309)||(39059718-39059821)
chr4 (383-557)||(46704201-46704375)
chr4 (380-516)||(18630823-18630960)
chr4 (208-309)||(36651736-36651837)
chr4 (385-552)||(29877624-29877792)
chr4 (206-309)||(9896503-9896606)
chr4 (380-552)||(23297423-23297593)
chr4 (380-526)||(48591352-48591499)
chr4 (224-309)||(37870640-37870726)
chr4 (404-524)||(36298344-36298465)
chr4 (405-552)||(18424232-18424378)
chr4 (463-557)||(212960-213053)
chr4 (380-526)||(2547975-2548122)
chr4 (380-514)||(17222852-17222987)
chr4 (404-526)||(896981-897103)
chr4 (207-309)||(7743575-7743677)
chr4 (383-549)||(42611799-42611966)
chr4 (443-552)||(7206578-7206687)
chr4 (381-557)||(8057017-8057194)
chr4 (383-526)||(36740915-36741059)
chr4 (405-552)||(38345776-38345922)
chr4 (404-526)||(7148783-7148905)
chr4 (215-289)||(23106768-23106842)
chr4 (380-549)||(12495572-12495744)
chr4 (380-557)||(11298573-11298740)
chr4 (207-309)||(42718574-42718678)
chr4 (217-309)||(54898883-54898975)
chr4 (431-526)||(43983362-43983457)
chr4 (402-460)||(48721897-48721955)
chr4 (473-549)||(948060-948136)
chr4 (473-552)||(3564205-3564284)
chr4 (383-453)||(8130563-8130634)
chr4 (473-552)||(43699505-43699584)
chr4 (506-557)||(46175902-46175953)
chr4 (380-453)||(14987528-14987602)
chr4 (383-439)||(30956782-30956839)
chr4 (380-480)||(31022457-31022558)
chr4 (383-483)||(35405738-35405838)
chr4 (380-452)||(42617158-42617231)
chr4 (380-460)||(47202902-47202983)
chr4 (404-484)||(22397258-22397338)
chr4 (404-452)||(24031165-24031213)
chr4 (382-437)||(34526267-34526323)
chr4 (405-552)||(43415242-43415390)
chr4 (377-460)||(46175904-46175988)
[»] chr1 (50 HSPs)
chr1 (377-557)||(9572709-9572891)
chr1 (207-309)||(33766359-33766461)
chr1 (377-557)||(46689475-46689656)
chr1 (404-552)||(46473079-46473227)
chr1 (215-297)||(19227894-19227976)
chr1 (207-309)||(51534473-51534575)
chr1 (380-552)||(13038932-13039105)
chr1 (216-304)||(4532087-4532175)
chr1 (221-309)||(33936450-33936538)
chr1 (380-526)||(26988159-26988306)
chr1 (380-526)||(28122627-28122776)
chr1 (404-549)||(4068103-4068248)
chr1 (207-309)||(13182647-13182749)
chr1 (224-297)||(34549383-34549456)
chr1 (224-297)||(45432381-45432454)
chr1 (377-526)||(36422906-36423056)
chr1 (381-525)||(15515276-15515421)
chr1 (380-504)||(37712100-37712225)
chr1 (404-543)||(35282547-35282686)
chr1 (380-526)||(37329340-37329487)
chr1 (404-550)||(51162256-51162402)
chr1 (402-550)||(12256594-12256741)
chr1 (405-552)||(26946058-26946206)
chr1 (383-526)||(48819310-48819454)
chr1 (383-549)||(10365159-10365325)
chr1 (380-526)||(16888897-16889040)
chr1 (443-550)||(49971238-49971345)
chr1 (404-526)||(6337709-6337831)
chr1 (385-453)||(10849999-10850068)
chr1 (404-514)||(12828145-12828257)
chr1 (404-557)||(25485728-25485881)
chr1 (404-484)||(36259244-36259324)
chr1 (380-422)||(1565303-1565345)
chr1 (380-546)||(35897547-35897718)
chr1 (380-460)||(15791460-15791541)
chr1 (404-540)||(26542970-26543106)
chr1 (406-526)||(3069809-3069929)
chr1 (377-460)||(19395851-19395935)
chr1 (404-460)||(50919564-50919620)
chr1 (380-514)||(41196638-41196773)
chr1 (380-453)||(5347238-5347312)
chr1 (403-437)||(10082351-10082385)
chr1 (380-460)||(3115990-3116071)
chr1 (231-316)||(20505672-20505757)
chr1 (232-309)||(33676491-33676568)
chr1 (509-557)||(9572707-9572755)
chr1 (404-552)||(20169249-20169397)
chr1 (380-427)||(28690114-28690162)
chr1 (377-460)||(42591459-42591543)
chr1 (380-427)||(47413482-47413530)
[»] chr3 (31 HSPs)
chr3 (377-545)||(32901073-32901242)
chr3 (380-526)||(43971775-43971922)
chr3 (380-557)||(3876191-3876369)
chr3 (377-552)||(33946475-33946643)
chr3 (384-552)||(34707645-34707814)
chr3 (382-526)||(43079864-43080009)
chr3 (380-552)||(51409378-51409550)
chr3 (380-526)||(40240505-40240652)
chr3 (380-552)||(22809121-22809295)
chr3 (388-552)||(40581012-40581178)
chr3 (409-549)||(53217998-53218138)
chr3 (377-461)||(36266307-36266392)
chr3 (380-526)||(585031-585177)
chr3 (377-453)||(38524172-38524249)
chr3 (232-309)||(50642380-50642457)
chr3 (441-552)||(29270346-29270457)
chr3 (379-460)||(25341347-25341429)
chr3 (404-526)||(42956132-42956254)
chr3 (404-526)||(45331248-45331370)
chr3 (377-441)||(4974407-4974472)
chr3 (473-550)||(10448761-10448838)
chr3 (380-460)||(17752059-17752140)
chr3 (380-460)||(19053379-19053460)
chr3 (380-484)||(20174868-20174973)
chr3 (377-453)||(43376779-43376856)
chr3 (404-450)||(27769736-27769782)
chr3 (380-484)||(48597794-48597900)
chr3 (404-497)||(53787705-53787798)
chr3 (414-522)||(3870189-3870297)
chr3 (380-451)||(31787608-31787680)
chr3 (380-453)||(52895333-52895407)
[»] chr6 (27 HSPs)
chr6 (383-557)||(6758607-6758783)
chr6 (377-552)||(23239232-23239408)
chr6 (380-554)||(29623406-29623580)
chr6 (381-535)||(32675818-32675973)
chr6 (378-557)||(2040107-2040292)
chr6 (384-552)||(21891270-21891439)
chr6 (417-552)||(3829885-3830020)
chr6 (215-309)||(18972609-18972703)
chr6 (382-526)||(2034159-2034304)
chr6 (215-290)||(24393921-24393996)
chr6 (404-552)||(10873971-10874117)
chr6 (224-297)||(12912255-12912328)
chr6 (405-553)||(2255718-2255866)
chr6 (377-484)||(10184255-10184363)
chr6 (224-303)||(165531-165610)
chr6 (378-434)||(6752915-6752972)
chr6 (383-526)||(2027107-2027251)
chr6 (402-505)||(7576812-7576915)
chr6 (380-453)||(10755211-10755285)
chr6 (380-460)||(9764319-9764400)
chr6 (473-526)||(24625862-24625915)
chr6 (386-453)||(10730142-10730210)
chr6 (463-550)||(6632646-6632733)
chr6 (380-422)||(23239232-23239275)
chr6 (383-437)||(35071359-35071414)
chr6 (404-552)||(10687292-10687443)
chr6 (509-557)||(23239362-23239410)
[»] chr5 (37 HSPs)
chr5 (211-309)||(19021396-19021494)
chr5 (388-526)||(13625456-13625596)
chr5 (408-548)||(42852011-42852150)
chr5 (380-526)||(40152804-40152951)
chr5 (207-309)||(39143215-39143317)
chr5 (208-309)||(22639563-22639664)
chr5 (404-552)||(7364262-7364410)
chr5 (383-526)||(28625491-28625635)
chr5 (383-526)||(24030226-24030369)
chr5 (207-309)||(6537080-6537181)
chr5 (404-546)||(13060555-13060697)
chr5 (380-497)||(35536885-35537002)
chr5 (380-552)||(29922117-29922290)
chr5 (380-460)||(40697083-40697164)
chr5 (382-525)||(11912032-11912176)
chr5 (408-550)||(43318990-43319132)
chr5 (405-552)||(2878631-2878777)
chr5 (404-535)||(17657244-17657375)
chr5 (443-525)||(1868858-1868940)
chr5 (474-552)||(22201959-22202037)
chr5 (400-461)||(11163231-11163292)
chr5 (467-552)||(17128263-17128348)
chr5 (404-497)||(28357181-28357274)
chr5 (238-298)||(926759-926819)
chr5 (377-552)||(1371921-1372094)
chr5 (473-553)||(10537241-10537321)
chr5 (405-505)||(41419533-41419633)
chr5 (380-434)||(6125389-6125444)
chr5 (380-526)||(6144749-6144896)
chr5 (473-548)||(11991294-11991369)
chr5 (406-484)||(38498623-38498699)
chr5 (380-505)||(40452405-40452532)
chr5 (380-522)||(41059717-41059860)
chr5 (408-514)||(23087736-23087842)
chr5 (404-484)||(27805968-27806048)
chr5 (380-462)||(41125748-41125832)
chr5 (380-427)||(42558645-42558693)
[»] scaffold0041 (1 HSPs)
scaffold0041 (224-297)||(94900-94973)
[»] scaffold1367 (1 HSPs)
scaffold1367 (383-557)||(1038-1213)
[»] scaffold0300 (1 HSPs)
scaffold0300 (208-309)||(9581-9682)
[»] scaffold0037 (1 HSPs)
scaffold0037 (224-309)||(997-1082)
[»] scaffold0157 (1 HSPs)
scaffold0157 (380-549)||(24733-24905)
[»] scaffold0057 (1 HSPs)
scaffold0057 (380-552)||(24317-24489)
[»] scaffold0074 (1 HSPs)
scaffold0074 (219-309)||(23809-23899)


Alignment Details
Target: chr8 (Bit Score: 401; Significance: 0; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 18 - 576
Target Start/End: Original strand, 45547703 - 45548270
Alignment:
Q  18 ctttgcgagacgattatgtctatcaatcatctgcgttgcttgggaaatattacgtaacagggtagnnnnnnnnnngtt-----ccggttttggccatggg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||     |  ||||||||||||||    
T  45547703 ctttgcgagacgattatgtctatcaatcatctgcgttgcttgggaaatattacgtaacagggtagctttcttttttttttcttcatgttttggccatggg 45547802  T
Q  113 aaatctgatgttatattttgttcaactaaatctccgataatatccctttaccatgcttgggaatatttacg------ggtagctttcttttttattcctg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      |||||||||||||||| ||||||    
T  45547803 aaatctgatgttatattttgttcaactaaatctccgataatatccctttaccttgcttgggaatatttacgtaacagggtagctttcttttttgttcctg 45547902  T
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||| ||||||||    
T  45547903 ttttggcattcttgtaattgactctttcagctggggttttggcactccttgtgctgaaatctccaggctttcagtaatttaatccattttagtttcttaa 45548002  T
Q  307 aaataaacaaactatttttgatagacaaatnnnnnnnttaaatttaccacaaccacatgggccctgattgggattgagcttatgaaaaatatctttacaa 406  Q
    ||| |||  ||||||||||| |||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548003 aaaaaaa--aactatttttggtagaaaaataaaaaaattaaatttaccacaaccacatgggccctgattgggattgagcttatgaaaaatatctttacaa 45548100  T
Q  407 ataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaa 506  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  45548101 ataaataagcttttatattaactcataagtttttattaatgaaaattttatcttcctaagttgtattttcataaactattttaacaagcttgtgaataaa 45548200  T
Q  507 aaataaaagcgtatttattttcattagttattttgcataagctcaatccaatcggccaaaaggctttctc 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548201 aaataaaagcgtatttattttcattagttattttgcataagctcaatccaatcggccaaaaggctttctc 45548270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 206 - 429
Target Start/End: Original strand, 45540318 - 45540534
Alignment:
Q  206 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 305  Q
    ||||| ||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||   | |||||| |||||||||||  |||| |||||||    
T  45540318 gttttagcattcttgcaattgactcttttagttggggttttggcattccttgtgctgaaatct---ggctttcagtaatttaatccgttttagtttctta 45540414  T
Q  306 aaaataaacaaactatttttgatagacaaatnnnnnnnttaaatttaccacaaccacatgggccctgattgggattgagcttatgaaaaatatctttaca 405  Q
    |||| ||||    ||||||  ||||| ||||       ||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  45540415 aaaaaaaac----tattttgaatagaaaaataaaaaaattaaatttaccacaaccacataggccctgattgggattgaacttatgaaaaatatttttaca 45540510  T
Q  406 aataaataagcttttatattaact 429  Q
    ||||||||| ||||||||||||||    
T  45540511 aataaataaacttttatattaact 45540534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 349 - 429
Target Start/End: Original strand, 45540695 - 45540776
Alignment:
Q  349 tttaccacaaccacatgggccctgattgggattgagcttatg-aaaaatatctttacaaataaataagcttttatattaact 429  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  45540695 tttaccacaaccacataggccctgattgggattgaacttatgaaaaaatatctttacaaataaataagcttttatattaact 45540776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 405 - 552
Target Start/End: Original strand, 32924167 - 32924313
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 504  Q
    ||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||  ||||||||  ||||||||||||  | ||||||||| | ||||    
T  32924167 aaataaataagcttttatattaattcataagttttcactaa-gaaaattttatcttcataagttgttttttcataaactacataaacaagcttataaata 32924265  T
Q  505 aaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    | |||||||||| ||||||||  ||| || | ||||||||||||||||    
T  32924266 acaaataaaagcatatttattcgcataagctgttttgcataagctcaa 32924313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 380 - 526
Target Start/End: Complemental strand, 32975845 - 32975698
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | |  ||| |||||| ||||||  ||||||||  ||||||    
T  32975845 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcacaaacaaaaattgtatcttcataagttgtgttttcat 32975746  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  || |||||||| ||||||| | |||||||| |||||||||    
T  32975745 aaactaccttgacaagcttatgaataatatataaaagcttatttattt 32975698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 34286492 - 34286638
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||||||  || | |||||||||||||||||||||||| ||||||||| |   ||||||||||| ||||||  |||| |||  |||||     
T  34286492 ttgagcttatgaaaaataggttatgcaaataaataagcttttatattaattcataagttctccctaacgaaaattgtatcttcataagctgt-ttttcac 34286590  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  || |||||||| ||||||| | |||||||| |||||||||    
T  34286591 aaactaccttgacaagcttatgaataatacataaaagcttatttattt 34286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 24504057 - 24504159
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    ||||||||  ||||||||||||||||| ||||| |||||||||| |||||||||||||||||| |  |||||| |  ||||||||| |||| |||||| |    
T  24504057 ttttggcacacttgtaattgactcttttagctgaggttttggcattccttgtgctgaaatctctatgctttcagttttttaatccattttagtttcttca 24504156  T
Q  307 aaa 309  Q
    |||    
T  24504157 aaa 24504159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 515
Target Start/End: Complemental strand, 38895817 - 38895681
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||| ||  || |||||||||||||| ||||||||||| | ||||||||| | |||| || ||| ||||||  ||| || |  ||||||    
T  38895817 ttgagcttatgaaaattagtttatacaaataaataagtttttatattaatttataagttttcactaacaaatattgtatcttcataaattattttttcat 38895718  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaag 515  Q
    ||||||  ||||||||||| ||||||| |||||||||    
T  38895717 aaactaccttaacaagcttatgaataataaataaaag 38895681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 8444356 - 8444258
Alignment:
Q  208 tttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaa 307  Q
    ||||||| |||||||||||||||||| | |||||||||||||| || ||||||||||||||| || ||   |||| ||||||||| |||| |||||| ||    
T  8444356 tttggcactcttgtaattgactcttttaactggggttttggcactctttgtgctgaaatctctaggct---attattttaatccattttagtttcttcaa 8444260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 24350447 - 24350594
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||| || ||| | |||||||||||| |||||| |||| ||||||||| ||| ||||||||||| ||||||  |||| | |  ||||||    
T  24350447 ttgagcttatgaaaactagcttatgcaaataaataagattttatgttaattcataagttcttactaacgaaaattatatcttcataagctattttttcat 24350546  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||| ||  || |||||||| ||||||| | |||||||| || ||||||    
T  24350547 aaattacgttgacaagcttatgaataatatataaaagcttaattattt 24350594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 550
Target Start/End: Complemental strand, 14942585 - 14942411
Alignment:
Q  377 ggattgagcttatgaaaaatatcttta-caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    |||| ||||||||| |||||| ||||  |||||||||||| |||||| |||| | ||||||| ||  |||| ||||||  |||||  ||||| ||  |||    
T  14942585 ggatggagcttatggaaaatagcttttgcaaataaataaggttttatgttaatttataagttcttgctaacaaaaattgcatcttcataagtcgtttttt 14942486  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 550  Q
    |||||||||  ||||||||||| | ||||| | | |||||| ||||||| | ||| |||| |||| |||||||||    
T  14942485 cataaactaacttaacaagcttataaataatacacaaaagcttatttatatacataagttgttttacataagctc 14942411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 25465781 - 25465878
Alignment:
Q  386 ttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaact 483  Q
    |||||||||||| ||| | ||||||||||||||||||| |||| ||||||||||| | |||| |||||| ||||||  ||||||||  |||||||||||    
T  25465781 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcagtaacaaaaattgtatcttcataagttgt-ttttcataaact 25465878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 13089850 - 13089752
Alignment:
Q  224 ttgactctttcagctggggttttggca----atccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaataaacaaac 318  Q
    |||||||||||||||||||||||||||     ||||||||||||||||||||| |||| | |||| ||||||| ||||  ||||| |||| ||| ||||    
T  13089850 ttgactctttcagctggggttttggcactccttccttgtgctgaaatctccagacttttagtaatataatccattttagcttcttcaaaaaaaaaaaac 13089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 552
Target Start/End: Complemental strand, 32131598 - 32131425
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||||||  || | |||||| |||||||||||| |||| ||||||||| | | ||  ||||||| ||||||  || |||||   |||||    
T  32131598 ttgagcttatgaaaaatagtttatgcaaatagataagcttttatgttaattcataagttctcactattgaaaattgtatcttcataggttgtttattcat 32131499  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||| |||  ||||||   |||||||| ||||||||| ||| || | ||||||||||||||||    
T  32131498 aaactaccttgacaaacttaggaataatgcataaaagcttatttatttgcataagctgttttgcataagctcaa 32131425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 10230191 - 10230099
Alignment:
Q  217 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    ||||||||||||||||| || ||  | |||| || | ||| ||||||||||||||| |||||||| |||||||| | |||| |||||||||||    
T  10230191 cttgtaattgactcttttagttgaagctttgacacttcttatgctgaaatctccagactttcattgatttaatcaattttagtttcttaaaaa 10230099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 24581536 - 24581444
Alignment:
Q  217 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    ||||||||||| ||||||||||||||||||| || ||||| | ||||||| | ||| |||||| |||| |||| || ||||  ||||||||||    
T  24581536 cttgtaattgattctttcagctggggttttgacactccttatactgaaatattcagactttcaataatataattcattttagcttcttaaaaa 24581444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 41145324 - 41145473
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||||||  || | |||||||||||| || |||||||| ||||||||| | | ||| ||||||  |||||||  |||||||  ||||||    
T  41145324 ttgagcttatgaaaaatagtttatgcaaataaataagtttatatattaattcataagttctcactaatgaaaatcgtatcttt-aaagttgttttttcat 41145422  T
Q  479 aaactattttaacaagcttgtg---aataaaaaataaaagcgtatttattt 526  Q
    ||||||  ||||||| ||| ||   ||||| |||||||||| |||||||||    
T  41145423 aaactaccttaacaaacttatgaataataataaataaaagcttatttattt 41145473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 515
Target Start/End: Original strand, 14724918 - 14725029
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||| |||||| |||| ||||||||| ||||||||||||||| || ||   ||||||||  ||||||||| ||  ||||||| ||| | |||    
T  14724918 caaataaataagtttttatcttaattcataagttcttattaacgaaaattatacctacataagttgttttttcataaattacattaacaatcttataaat 14725017  T
Q  504 aaaaaataaaag 515  Q
    || | |||||||    
T  14725018 aatatataaaag 14725029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 549
Target Start/End: Original strand, 16972284 - 16972455
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||  |||||| ||| | ||||||||||| |||||||||| | ||||||||| | | ||||||||||| ||||||  |||| |||  ||||||    
T  16972284 ttgagcttattcaaaatagcttatgcaaataaataaacttttatattgattcataagttatcactaacgaaaattgtatcttcataagctgttttttcat 16972383  T
Q  479 aaactatttta-acaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 549  Q
     |||||  ||| |||| ||| ||||||| | ||| |||| ||||||||| ||  | || |||||||||||||    
T  16972384 gaactaccttagacaaacttatgaataatacatacaagcttatttatttgcaaaaattgttttgcataagct 16972455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 460
Target Start/End: Original strand, 25333655 - 25333710
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||| ||||||    
T  25333655 aaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatctt 25333710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 526
Target Start/End: Complemental strand, 28879210 - 28879069
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagt--ttttattaacgaaaattttatctttctaagttgtactttcata 479  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||||  ||| | |||| |||     |||||  ||||||||  |||||||    
T  28879210 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctttcactaacaaaa-----atcttcataagttgttatttcata 28879116  T
Q  480 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    |||||  || |||||||| ||||||| | |||||||| |||||||||    
T  28879115 aactaccttgacaagcttatgaataatacataaaagcttatttattt 28879069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 493
Target Start/End: Complemental strand, 2563519 - 2563402
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||| | ||| ||||||||| || |||||||| |||| ||||||| | ||| |||  |||||| ||| ||   |||||||  |||    
T  2563519 ggattgagcttatgaaaaagagcttatacaaataattatgcttttatgttaattcataagatcttactaataaaaattgtatattcaaaagttgtttttt 2563420  T
Q  476 cataaactattttaacaa 493  Q
    ||||||||| ||||||||    
T  2563419 cataaactactttaacaa 2563402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 452
Target Start/End: Complemental strand, 24087321 - 24087256
Alignment:
Q  388 atgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaat 452  Q
    |||||||||| ||| | ||||||||||||||||||| |||| | ||||||||| ||||||||||||    
T  24087321 atgaaaaatagcttatgcaaataaataagcttttattttaatttataagttttcattaacgaaaat 24087256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 503
Target Start/End: Original strand, 10298855 - 10298978
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||| |||| ||| | |||||| ||| |||||||| |||| ||||||||| | |||||| |||||| ||||||  |||| |||  ||||||    
T  10298855 ttgagcttatgaataatagcttatgcaaatagata-gcttttatgttaattcataagttctcattaacaaaaattgtatcttcataagctgttttttcat 10298953  T
Q  479 aaactattttaacaagcttgtgaat 503  Q
    ||||||  || |||||||| |||||    
T  10298954 aaactaccttgacaagcttatgaat 10298978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 552
Target Start/End: Original strand, 26046978 - 26047057
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||||||||  | ||||||||||| ||||| |||||||||| || || ||| ||| |||| |||| |||||||||||    
T  26046978 tttcataaactacctcaacaagcttgttaataataaataaaagcttacttttttgcataagttgttttacataagctcaa 26047057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 483
Target Start/End: Complemental strand, 30974150 - 30974043
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    |||||| |||||||||||| | ||| | |||||||||||||||||||  ||| ||||||| | ||| ||||||||||| ||  ||  ||||||||  |||    
T  30974150 ggattgtgcttatgaaaaagagcttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtaaattcataagttgtttttt 30974051  T
Q  476 cataaact 483  Q
    ||||||||    
T  30974050 cataaact 30974043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 526
Target Start/End: Complemental strand, 2669809 - 2669659
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||| | ||| |  |||||||||||||||||| |||| ||||||| |  || ||| ||||| | ||| ||  ||||||||  |||    
T  2669809 ggattgagcttatgaaaaagagcttatgaaaataaataagcttttatgttaattcataagatcctactaatgaaaaatgtatattcataagttgtttttt 2669710  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    |||||||||  ||||||| ||| | ||||| | || | ||| |||||||||    
T  2669709 cataaactaccttaacaaacttataaataatacattagagcttatttattt 2669659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 460
Target Start/End: Original strand, 9131059 - 9131137
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    ||||||||||||||| ||| | ||||||||||| ||||||| |||| |||||||||   | ||||||||||| ||||||    
T  9131059 agcttatgaaaaatagcttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatctt 9131137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 10213853 - 10213795
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 437  Q
    |||||||||||||||||| ||| | ||||||||||||||| ||| |||| |||||||||    
T  10213853 ttgagcttatgaaaaatagcttatgcaaataaataagcttgtatgttaattcataagtt 10213795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 552
Target Start/End: Original strand, 11988308 - 11988354
Alignment:
Q  506 aaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  11988308 aaaataaaagcatatttatttacataagttatttttcataagctcaa 11988354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 551
Target Start/End: Original strand, 29713289 - 29713334
Alignment:
Q  506 aaaataaaagcgtatttattttcattagttattttgcataagctca 551  Q
    ||||||||||| ||||||||| ||| ||||||||| ||||||||||    
T  29713289 aaaataaaagcttatttatttacataagttatttttcataagctca 29713334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 35055579 - 35055499
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| |||| ||||||| | | | ||||||||||| ||||||    
T  35055579 ttgagcttatgaaaaatagcttatgtaaataaataagcttttat-ttaattcataagctctcactaacgaaaattgtatctt 35055499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 493
Target Start/End: Original strand, 36907597 - 36907686
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaa 493  Q
    |||||||||||||||||||  ||| ||||||| | ||| ||||||||||| ||| ||   |||||||  ||||||||||||  |||||||    
T  36907597 caaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcacaagttgttttttcataaactaccttaacaa 36907686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 37410841 - 37410922
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  ||||||||||| || ||| |||| | ||||||| ||| ||||||||||| ||||||    
T  37410841 ttgagcttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagttcttactaacgaaaattgtatctt 37410922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 42102264 - 42102183
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| |||| | ||||  | | ||||||||||||| ||||||    
T  42102264 ttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataacctctcattaacgaaaattgtatctt 42102183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 557
Target Start/End: Original strand, 2669763 - 2669811
Alignment:
Q  509 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||| ||||||||||||| || | |||| ||||||||||||||||    
T  2669763 ataaaagcttatttattttcataagctctttttcataagctcaatccaa 2669811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 8752965 - 8752906
Alignment:
Q  380 ttgagcttatgaaaaatatctttac--aaataaataagcttttatattaactcataagtt 437  Q
    |||||||||||||||||| ||| |   |||||||||||||||||| |||| |||||||||    
T  8752965 ttgagcttatgaaaaataacttaatgtaaataaataagcttttatgttaattcataagtt 8752906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 9782303 - 9782223
Alignment:
Q  417 ttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagctt 497  Q
    |||||| |||| ||||||| | ||| ||||||||||| ||| ||  ||||||||  ||| |||||||| ||||||||||||    
T  9782303 ttttatgttaattcataagatcttactaacgaaaattgtatattcataagttgttttttaataaactactttaacaagctt 9782223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 548
Target Start/End: Complemental strand, 19925718 - 19925546
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| |  |||||||||||  ||||| |||| |  |||| | | | ||||||||||| ||||||  ||| ||||  |||    
T  19925718 ggattgagcttatgaaaaatagcttatgtaaataaataagtatttattttaatttgtaagctctcactaacgaaaattgtatcttcataaattgtttttt 19925619  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagc 548  Q
    | |||| ||  ||||||| ||| | ||||| || ||||||| ||||||||| ||| || | ||||| ||||||    
T  19925618 cgtaaaataccttaacaaacttataaataataattaaaagcttatttatttgcataagctgttttgtataagc 19925546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 377 - 552
Target Start/End: Complemental strand, 21788618 - 21788442
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||| | | | ||||||||||||||||||  ||||||||  |||    
T  21788618 ggattgagcttatgaaaaataacttatgcaaataaataagcttttatattaattcataagctctcactaacgaaaattttatcttcataagttgtttttt 21788519  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    |||||||||| ||||||||||| ||||||| |||||||||| ||||||||| ||| || | |||||||||| |||||    
T  21788518 cataaactatcttaacaagcttatgaataataaataaaagcttatttatttgcataagatgttttgcataaactcaa 21788442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 2702356 - 2702253
Alignment:
Q  206 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  || |||||| || ||||||||| |||| ||||||     
T  2702356 gttttggcattcttgtaattgactctttcagctggggttttggcactccttgtgctgaaatcttgaggctttcagtattttaatccattttagtttcttt 2702257  T
Q  306 aaaa 309  Q
    ||||    
T  2702256 aaaa 2702253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 37647968 - 37648070
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    ||||| || |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||  |||||| || ||||||||| |||||||||||||    
T  37647968 ttttgacactcttgtaattgactcttttagctgaggttttggcactccttgtgctgaaatctccaaactttcagtattttaatccattttaatttcttaa 37648067  T
Q  307 aaa 309  Q
    |||    
T  37648068 aaa 37648070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 222 - 309
Target Start/End: Original strand, 27271658 - 27271745
Alignment:
Q  222 aattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||| |||||||||| | |||| |||||||||||    
T  27271658 aattgactctttcagctggagttttgacactccttgtgctgaaatctccaggctttcagtaatttaatctattttagtttcttaaaaa 27271745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 12410790 - 12410892
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||||||| ||||||||||||| || || ||||| |||||||||||| |||||| || ||||||||| |||| |||||| |    
T  12410790 ttttggcactcttgtaattgactcttttagctggggttttgtcactctttgtgatgaaatctccaggctttcagtattttaatccattttagtttcttca 12410889  T
Q  307 aaa 309  Q
    |||    
T  12410890 aaa 12410892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 12422850 - 12422952
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||||||| ||||||||||||| || || ||||| |||||||||||| |||||| || ||||||||| |||| |||||| |    
T  12422850 ttttggcactcttgtaattgactcttttagctggggttttgtcactctttgtgatgaaatctccaggctttcagtattttaatccattttagtttcttca 12422949  T
Q  307 aaa 309  Q
    |||    
T  12422950 aaa 12422952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 6764423 - 6764525
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||||||| ||||||||||||| || ||||| |||||||||||||   |||||| || ||||||||| |||| |||||| |    
T  6764423 ttttggcactcttgtaattgactcttttagctggggttttgacactccttatgctgaaatctccgagctttcagtattttaatccattttagtttcttca 6764522  T
Q  307 aaa 309  Q
    |||    
T  6764523 aaa 6764525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 8832612 - 8832510
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||||||| | ||||||||||| |||||||||||  |||  |||||||||    
T  8832612 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatctttctaacctgtgttttcataaa 8832513  T
Q  482 cta 484  Q
    |||    
T  8832512 cta 8832510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 11031809 - 11031903
Alignment:
Q  215 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||| | || || ||||  ||||||||||    
T  11031809 ttcttgtatttgactctttcagctggggttttggcactccttatgctgaaatctccagactttcaataatatcattcattttagcttcttaaaaa 11031903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 380 - 535
Target Start/End: Complemental strand, 4004977 - 4004821
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||| |||||||||||| ||| | || ||||| ||||||||||| ||| ||||||||| | | ||||||||||| || |||  ||||||||| ||||||    
T  4004977 ttgagtttatgaaaaatagcttatgcagataaaaaagcttttatagtaattcataagttctcactaacgaaaattgtagcttcataagttgtattttcat 4004878  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagtt 535  Q
    |||||| ||||| |||||| ||||||  | |||||||  ||||||||| ||| ||||    
T  4004877 aaactactttaaaaagcttatgaatagtacataaaagattatttatttgcataagtt 4004821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 34394572 - 34394480
Alignment:
Q  217 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||  || |||||| |||| |||| || ||||| ||||| ||||    
T  34394572 cttgtaattgactctttcagctggggttttggcactccttgtgttgaaatctttaggctttcagtaatataattcattttaacttcttcaaaa 34394480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 552
Target Start/End: Complemental strand, 4027080 - 4026911
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | |||||||||||||| |||| |||| ||||||||| | | |||| |||||| ||||||  |||| |||  |||||||||    
T  4027080 agcttatgaaaaatagcttatgcaaataaataagctattatgttaattcataagttctcactaacaaaaattgtatcttcataagctgttttttcataaa 4026981  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    |||  || |||||||| || |||| | |||||||| ||||||||| ||| ||   ||||||||||||||||    
T  4026980 ctaccttgacaagcttatg-ataatacataaaagcttatttatttgcataagcagttttgcataagctcaa 4026911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 463 - 557
Target Start/End: Original strand, 34913402 - 34913496
Alignment:
Q  463 taagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    ||||||||  ||||||||||||| ||||||| ||| ||||||| | |||||||| ||||||||| ||| || | |||||||||||||||||||||    
T  34913402 taagttgttttttcataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaatccaa 34913496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 548
Target Start/End: Complemental strand, 15155971 - 15155802
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||| | ||| |  ||||||||||| |||||| |||| ||||||||| | ||||||| ||||| || |||  ||| ||||  ||||||    
T  15155971 ttgagcttatgaaaaagagcttatgaaaataaataagtttttatcttaattcataagttctcattaacggaaattgtaccttcttaaattgttttttcat 15155872  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagc 548  Q
    |||||   |||||||| || | ||||| | |||||||| ||||||||||||| |||| |||| |||||||    
T  15155871 aaacttcattaacaagattataaataatacataaaagcatatttattttcataagttgttttacataagc 15155802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 552
Target Start/End: Original strand, 33321240 - 33321413
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||| |||||| ||| | ||||||||||| | ||||| |||| ||| ||| | | | |||| |||||| ||||||  |||| |||  ||||||    
T  33321240 ttgagcttatgtaaaatagcttatgcaaataaataaacctttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcat 33321339  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||||||| ||||||| | |||||||| ||||||||| ||  |||| ||||||||||||||||    
T  33321340 aaactaccttgacaagcttatgaataagacataaaagcttatttatttgcacaagttgttttgcataagctcaa 33321413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 505
Target Start/End: Complemental strand, 42064984 - 42064883
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||  ||||||  |||||| |  ||| ||||||||  ||||||||||| |||||    
T  42064984 caaataaataagcttttatattaattcataagttcttactaacgaaaatgatatcttcataagttatttttttataaactaccttaacaagcttatgaat 42064885  T
Q  504 aa 505  Q
    ||    
T  42064884 aa 42064883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 514
Target Start/End: Original strand, 36501443 - 36501578
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||| ||||||||| ||| | ||||||||||||||||||| |||| |||| |||| | | ||||| ||||||||||||  |||| |||  ||||||    
T  36501443 ttgagcttgtgaaaaatagcttatgcaaataaataagcttttatgttaattcatgagttctcactaacgcaaattttatcttcataagctgttttttcat 36501542  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaa 514  Q
    ||||||  || |||||||| ||||||| | ||||||    
T  36501543 aaactaccttgacaagcttatgaataatacataaaa 36501578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 383 - 460
Target Start/End: Complemental strand, 38216174 - 38216096
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||| |||||||| ||| | ||||||||||||||||||| |||||||||||||| | | ||||||||||| ||||||    
T  38216174 agcttacgaaaaatagcttatgcaaataaataagcttttatgttaactcataagttctcactaacgaaaattgtatctt 38216096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 524
Target Start/End: Complemental strand, 11777145 - 11776997
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||| ||||||| ||| | |||||||||||| |||||| |||  | ||||||| | | |||| |||| | ||||||  |||| |||  |||    
T  11777145 ggattgagcttattaaaaatagcttctgcaaataaataaggttttatgttagtttataagttctcactaacaaaaagtgtatcttcataagctgtgtttt 11777046  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttat 524  Q
    |||||||||  ||||||||||| | ||||| | |||||||| |||||||    
T  11777045 cataaactaacttaacaagcttataaataatacataaaagcttatttat 11776997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 25836641 - 25836787
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||| |||  ||||||||| | | |||||| |||| | ||||  ||||  ||  ||||||    
T  25836641 ttgagcttatgaagaataccttatgcaaataaataagcttttatgttat-tcataagttctcactaacgataattgtgtcttcataagccgttttttcat 25836739  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  || |||||||| ||||||| | |||||||| |||||||||    
T  25836740 aaactaccttgacaagcttatgaataatacataaaagcatatttattt 25836787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 549
Target Start/End: Complemental strand, 29774878 - 29774733
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||||||||||  |||| ||||||||| | | ||||||||||| ||| ||  ||||  ||  ||||||||||||  ||||||| ||  |||||    
T  29774878 caaataaataagcttttacgttaattcataagttctcactaacgaaaattgtattttcataagccgttttttcataaactaccttaacaaactaatgaat 29774779  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagct 549  Q
    ||   |||||||  ||||||||| ||| |||| || ||||||||||    
T  29774778 aatgcataaaagtttatttatttgcataagttgttatgcataagct 29774733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 552
Target Start/End: Complemental strand, 37409801 - 37409628
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| ||||| ||| |||| |||||| |||| |   ||||||| | |||| |||||| ||| ||  ||| ||||  ||||||    
T  37409801 ttgagcttatgaaaaatagcttatacaagtaactaagattttatgttaatttcgaagttttcaataacaaaaattgtattttcataaattgttttttcat 37409702  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||| || | |||||| |  ||||||| ||||||||| ||| |||| ||||||||| ||||||    
T  37409701 aaactacattgacaaactagagaataatacttaaaagcttatttatttgcataagttgttttgcatacgctcaa 37409628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 509 - 557
Target Start/End: Original strand, 21788572 - 21788620
Alignment:
Q  509 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||| ||||||||| ||| ||||||||| ||||||||||||||||    
T  21788572 ataaaagcttatttatttgcataagttatttttcataagctcaatccaa 21788620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 35731271 - 35731203
Alignment:
Q  402 tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgt 470  Q
    |||||||||||||| |||||  |||| ||||||| ||| ||||| ||||||||||| ||| ||||||||    
T  35731271 tacaaataaataagattttacgttaattcataagatttcattaatgaaaattttatttttataagttgt 35731203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 550
Target Start/End: Original strand, 38471718 - 38471890
Alignment:
Q  379 attgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttca 477  Q
    ||||| ||||||||||| | ||| |||||||||||||  | |||| |||| ||||||||| | | ||||||||||| || |||  |||  |||  |||||    
T  38471718 attgaacttatgaaaaagaacttatacaaataaataaattgttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttca 38471817  T
Q  478 taaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 550  Q
    |||||||  | || |||||| |  |||| | |||||||| ||||||||| ||| || | ||||||||||||||    
T  38471818 taaactacatcaagaagcttatacataacacataaaagcatatttatttgcataagctgttttgcataagctc 38471890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 552
Target Start/End: Original strand, 755764 - 755843
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||||||||   |||||||||| ||||||| | |||||||| || |||||| | | |||| ||||||||||||||||    
T  755764 tttcataaactaccgtaacaagcttctgaataatacataaaagcttaattatttgcgtaagttgttttgcataagctcaa 755843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 30382197 - 30382300
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||||||  || |  |||||||||||||||| | |||| | ||||| ||| | ||||||||||| |||||| |||| |||| ||||| |    
T  30382197 ttgagcttatgaaaaatagattatgtaaataaataagcttttgttttaatttataagctttcactaacgaaaattgtatcttcctaaattgttctttcgt 30382296  T
Q  479 aaac 482  Q
    ||||    
T  30382297 aaac 30382300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 7480852 - 7480918
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgt 470  Q
    |||||||||||| |||||| |||| ||||||||| | | ||| ||||||| |||||| |||||||||    
T  7480852 caaataaataagtttttatgttaattcataagttctgactaatgaaaattgtatcttcctaagttgt 7480918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 12950040 - 12950134
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgt 470  Q
    ||||||||||||||||||| | | | | ||||||| ||||||||||| |||| ||||||| | ||| ||||||||||| ||| ||  ||||||||    
T  12950040 ggattgagcttatgaaaaagagcatatgcaaataattaagcttttatgttaattcataagatcttactaacgaaaattctatattcataagttgt 12950134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 22898285 - 22898359
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| ||||   ||||||||| | |||||||||||    
T  22898285 ttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttttgactaacgaaaatt 22898359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 23956217 - 23956274
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatcttt 461  Q
    |||||||||||| |||||| |||| | ||||||| | ||||||||||||| |||||||    
T  23956217 caaataaataagtttttatgttaatttataagttctcattaacgaaaattgtatcttt 23956274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 493
Target Start/End: Original strand, 16108076 - 16108164
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaa 493  Q
    |||||| ||||| ||||| |||| ||||||| ||| |||||| |||||| ||| ||  ||||||||  ||||||||||||  |||||||    
T  16108076 aaataattaagcgtttatgttaattcataagatttaattaacaaaaattgtatattcataagttgttttttcataaactaccttaacaa 16108164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 8e-41; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 377 - 557
Target Start/End: Original strand, 44613398 - 44613579
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | |||||  |||||| |||| |  ||||||||  |||    
T  44613398 ggattgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctaattaataaaaattgtatcgtcataagttgtttttt 44613497  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||||  ||||||||||| ||||||| |||||||||| ||||||||| ||| || | |||||||||||||||||||||    
T  44613498 cataaactaccttaacaagcttatgaataataaataaaagcttatttatttgcataagctgttttgcataagctcaatccaa 44613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 1032222 - 1032334
Alignment:
Q  206 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 305  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||| ||||||| |||| |||| |||||||    
T  1032222 gttttggcattcttgtaattgactctttcagctggggttttagcattccctgtgctgaaatctccaggctttcagtaatttagtccaatttagtttctta 1032321  T
Q  306 aaaataaacaaac 318  Q
    |||| ||| ||||    
T  1032322 aaaaaaaaaaaac 1032334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 28782112 - 28782010
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||| |||||| |    
T  28782112 ttttggcactcttgtaattgactcttttagctggggttttggcactccttgtgctgaaatctccaggctttcagtattttaatccattttagtttcttca 28782013  T
Q  307 aaa 309  Q
    |||    
T  28782012 aaa 28782010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 9948933 - 9949035
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||| |||||| || ||||||||| |||| |||||| |    
T  9948933 ttttggcactcttgtaattgactcttttagctggggttttggtactccttgtgctgaaatcttcaggctttcagtattttaatccattttagtttcttca 9949032  T
Q  307 aaa 309  Q
    |||    
T  9949033 aaa 9949035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 11621380 - 11621457
Alignment:
Q  220 gtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 297  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  11621380 gtaattgactctttcagctggggttttggcactccttgtgctgaaatctccaggctttcagtaatataatccatttta 11621457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 9942699 - 9942597
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||| ||| || || ||||||| || ||||||||||||||||||||| |||||| || ||||||||| |||| ||||||||    
T  9942699 ttttggcactcttgtaattgactattttagttgaggttttgacactccttgtgctgaaatctccagactttcagtattttaatccattttagtttcttaa 9942600  T
Q  307 aaa 309  Q
    |||    
T  9942599 aaa 9942597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 408 - 552
Target Start/End: Original strand, 48021605 - 48021748
Alignment:
Q  408 taaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaa 507  Q
    |||||||  ||||||||||| ||||||||||| | ||| ||||||| ||||||  | |||| |  |||||||||||| |||||||||||| ||||||| |    
T  48021605 taaataattttttatattaattcataagttttcactaatgaaaattgtatcttcattagttatt-tttcataaactactttaacaagcttatgaataata 48021703  T
Q  508 aataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||| ||| ||||||||| ||| | || ||||| ||||||||||    
T  48021704 aataagagcttatttatttgcataaattgttttgtataagctcaa 48021748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 380 - 505
Target Start/End: Complemental strand, 39279588 - 39279461
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagttttta-ttaacgaaaattttatctttctaagttgtactttca 477  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||| ||| | | |||||||||||| |||||| ||||| ||   |||||    
T  39279588 ttgagcttatgaaaaatagcttatacaaataaataagcttttatgttaattcataggttctcaattaacgaaaattgtatcttcctaagctgatttttca 39279489  T
Q  478 taaactattttaacaagcttgtgaataa 505  Q
    ||||| |  ||||||||||| |||||||    
T  39279488 taaaccaccttaacaagcttatgaataa 39279461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 557
Target Start/End: Original strand, 28759790 - 28759946
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaatt---ttatctttctaagttgtactttcataaactattttaacaagcttgtg 500  Q
    |||| |||||||||||||||| || ||||||||| ||| |||| || |||   |||||||| |||||| |  ||| ||||||||  ||||||||||| ||    
T  28759790 caaacaaataagcttttatatcaattcataagttcttactaacaaatattatattatctttataagttatttttttataaactaccttaacaagcttatg 28759889  T
Q  501 aataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    ||||| |||||||| | | ||| ||||||| |||| |||| ||||| ||||||||||    
T  28759890 aataataaataaaaactttttttttttcataagttgttttacataaactcaatccaa 28759946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 552
Target Start/End: Original strand, 29390479 - 29390651
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||||||  || | ||||||||||||||||||| |||| |||||| || |   ||||||||||| ||||||  ||||||||  ||||||    
T  29390479 ttgagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataaattctagctaacgaaaattgtatcttcataagttgtt-tttcat 29390577  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||||||| ||||||| | || ||||  ||||||||| ||| |||| |||| ||||| |||||    
T  29390578 aaactacctttacaagcttatgaataatacatcaaagattatttatttgcataagttgttttccataaactcaa 29390651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 40871382 - 40871309
Alignment:
Q  224 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 297  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  40871382 ttgactctttcagctgggattttggcactccttgtgctgaaatctccaggcttttaataatataatccatttta 40871309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 550
Target Start/End: Complemental strand, 22032920 - 22032749
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||| | ||| | |||||||||||| |||||| |||| | ||||||| | | ||||||||||| || |||  ||| ||||  ||||||    
T  22032920 ttgagcttatgaaaaaaagcttatgcaaataaataagtttttatcttaatttataagttctcactaacgaaaattgtaccttcataaattgttttttcat 22032821  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 550  Q
    ||||||  |||||| |||| | ||||| | |||||| | ||||||||| ||| |||| |||| |||||||||    
T  22032820 aaactacattaacatgcttataaataatacataaaaacatatttatttgcataagttgttttacataagctc 22032749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 526
Target Start/End: Complemental strand, 29378803 - 29378656
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||| |||||||||||| ||| | ||||||||||||||||||  |||| ||||||||| ||| ||||||||||| ||||||  |||| |||  ||||||    
T  29378803 ttgagtttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttcttactaacgaaaattgtatcttcataagctgttttttcat 29378704  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  || |||| ||  | ||||| | |||||||| |||||||||    
T  29378703 aaactaccttgacaaactcataaataatacataaaagcttatttattt 29378656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 497
Target Start/End: Original strand, 47654339 - 47654460
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||| ||||| | |||||||||||| |||||| |||| ||||||||| | | ||||||||||| || |||  |||  |||  |||    
T  47654339 ggattgagcttatgaaaaagatcttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgtttttt 47654438  T
Q  476 cataaactattttaacaagctt 497  Q
    |||||||||  |||||||||||    
T  47654439 cataaactacattaacaagctt 47654460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 515
Target Start/End: Original strand, 37465811 - 37465951
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    |||| ||||||||||||| || ||| | |||||||||||||||||||||||| ||||||||| |    ||| || ||| ||||||  ||||||||  |||    
T  37465811 ggatcgagcttatgaaaattagcttatgcaaataaataagcttttatattaattcataagttctcgccaacaaatattgtatcttaataagttgtttttt 37465910  T
Q  476 c-ataaactattttaacaagcttgtgaataaaaaataaaag 515  Q
    | ||||||||| |||||||| || ||||||| |||||||||    
T  37465911 ctataaactatcttaacaagtttatgaataataaataaaag 37465951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 526
Target Start/End: Complemental strand, 47648670 - 47648549
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||   ||||||||||| ||||||||||| | ||||||||| || |||||  ||  ||||  ||||||||||||| |||||||| | ||||||    
T  47648670 caaataaatatatttttatattaattcataagttttcactaacgaaaaatt-atcttaatagattgttttttcataaactatcttaacaagttcgtgaat 47648572  T
Q  504 aaaaaataaaagcgtatttattt 526  Q
    || |||||||||  |||||||||    
T  47648571 aataaataaaagtttatttattt 47648549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 552
Target Start/End: Complemental strand, 38372716 - 38372543
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||  | ||||||||| ||||||||| |||| ||||||||| | | ||||||||||| | ||||  | || ||   |||| |    
T  38372716 ttgagcttatgaaaaatagctaatgcaaataaatcagcttttatgttaattcataagttctcactaacgaaaattgtttcttcttgagctgctttttcgt 38372617  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||| ||| ||||||| | |||| ||| ||||||||| ||| || | ||||||||||||||||    
T  38372616 aaactaccttgacaaacttatgaataatacataagagcttatttatttgcataagctgttttgcataagctcaa 38372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 516
Target Start/End: Original strand, 14691252 - 14691364
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||| ||||||| |||| ||||||||| | | ||||||||||| ||||||  ||| ||||  ||||||||| ||  || |||||||| |||||    
T  14691252 caaataaataaccttttatgttaattcataagttctcactaacgaaaattatatcttcataaattgttttttcataaattacattgacaagcttatgaat 14691351  T
Q  504 aaaaaataaaagc 516  Q
    || | ||||||||    
T  14691352 aatacataaaagc 14691364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 550
Target Start/End: Complemental strand, 22575741 - 22575573
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| |  | ||||||||| |||||| |||| | ||||| | ||| ||||||||||| ||||||  |||  |||  |||||||||    
T  22575741 agcttatgaaaaatagcttatgtagataaataagtttttattttaatttataagctcttactaacgaaaattgtatcttcataaactgttttttcataaa 22575642  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 550  Q
     ||| ||||||| ||| | ||||| | |||||| ||||||||||| ||| || | |||| |||||||||    
T  22575641 atatcttaacaaacttataaataatacataaaaacgtatttatttgcataagatgttttacataagctc 22575573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 33204989 - 33204934
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 437  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||| |||||||||    
T  33204989 agcttatgaaaaatatcttatgcaaataaataagcttttatgttaattcataagtt 33204934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 16932858 - 16932939
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  | |||||||||||||||| |||| | ||||| ||||| ||||||||||| ||||||    
T  16932858 ttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatctt 16932939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 16938241 - 16938322
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  | |||||||||||||||| |||| | ||||| ||||| ||||||||||| ||||||    
T  16938241 ttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatctt 16938322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 16958973 - 16958892
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  | |||||||||||||||| |||| | ||||| ||||| ||||||||||| ||||||    
T  16958973 ttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatctt 16958892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 33288003 - 33288084
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    ||||||||||||||| || ||| | |||||||||||| |||||| |||| ||||||||||| | ||||||||| | ||||||    
T  33288003 ttgagcttatgaaaactagcttatccaaataaataagtttttatgttaattcataagttttcactaacgaaaactgtatctt 33288084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 17193972 - 17193881
Alignment:
Q  217 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    ||||||||||||| ||||||||||| ||| | || ||||| | ||||||||||| | |||||| || |||||| || ||||| ||||||||||    
T  17193972 cttgtaattgactgtttcagctgggattt-gacactccttatactgaaatctcccggctttcagtattttaatacattttaacttcttaaaaa 17193881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 542
Target Start/End: Complemental strand, 34923091 - 34922926
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttg--tactttc 476  Q
    |||||||||| ||||||| ||| | ||||||||||||||||||| |||  ||||||||| | | ||||||||| | ||||||   ||| ||  |  |||     
T  34923091 ttgagcttataaaaaatagcttatgcaaataaataagcttttatgttagttcataagttctcactaacgaaaagtgtatcttcacaagctgttttttttt 34922992  T
Q  477 ataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgc 542  Q
    ||||||||  || |||| ||| ||||||| | |||||||| ||||||||| ||| |||| ||||||    
T  34922991 ataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagttgttttgc 34922926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 526
Target Start/End: Complemental strand, 35809251 - 35809101
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||| | ||| |  |||||| ||||||||||| |||| ||||||  | ||| |  |||||||| ||| ||  ||||||||  |||    
T  35809251 ggattgagcttatgaaaaagagcttatgtaaataattaagcttttatgttaattcataaaatcttactggcgaaaattgtatattcttaagttgtttttt 35809152  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    |||||||||  ||||||||||| | ||||| | || || || |||||||||    
T  35809151 cataaactacgttaacaagcttataaataatacattaatgcttatttattt 35809101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 513
Target Start/End: Original strand, 8180544 - 8180653
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||| |||||||||||| ||||||||||| | |||  || ||| ||| ||| ||||||    ||| ||||||||  ||||||||||| | |||    
T  8180544 caaataaataaacttttatattaattcataagttttcactaataaatattatatttttataagttaattttttataaactaccttaacaagcttataaat 8180643  T
Q  504 aaaaaataaa 513  Q
    || |||||||    
T  8180644 aataaataaa 8180653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 541
Target Start/End: Complemental strand, 43391880 - 43391717
Alignment:
Q  379 attgagcttatgaaaaatatctttac--aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttc 476  Q
    |||||| ||||||||||||  |||||  ||||||||||| ||||||||| | | ||||||||| |  ||| |||||| ||||||  ||| || |  ||||    
T  43391880 attgagtttatgaaaaatag-tttacgtaaataaataagtttttatatttatttataagttttcacaaacaaaaattatatcttcataaattattttttc 43391782  T
Q  477 ataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttg 541  Q
    ||||||||  ||||||| ||| ||||||| ||| | |||  ||||||||| ||| |||| |||||    
T  43391781 ataaactaccttaacaaacttatgaataataaacataagtttatttatttacataagttgttttg 43391717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 437
Target Start/End: Original strand, 43818803 - 43818864
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 437  Q
    ||||||||||||||||||| | ||| | |||||||||||| |||||| |||| |||||||||    
T  43818803 ggattgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagtt 43818864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 526
Target Start/End: Complemental strand, 20888732 - 20888584
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | ||||||| |||| |||||| |||| | ||||||||| |   | ||||||| ||||||  ||| ||||  ||||||    
T  20888732 ttgagcttatgaaaaataacttatgcaaataagtaagtttttatgttaatttataagttttcacggaagaaaattgtatcttcataaattgttttttcat 20888633  T
Q  479 aaactattttaacaagcttgtgaataaaaaat-aaaagcgtatttattt 526  Q
    ||||||  ||  ||||||| ||||||| | || |||||| |||||||||    
T  20888632 aaactacctttgcaagcttatgaataatacataaaaagcttatttattt 20888584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 552
Target Start/End: Original strand, 22515564 - 22515608
Alignment:
Q  508 aataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||||| ||||||||||||| |  ||||||||||||||||||    
T  22515564 aataaaagcttatttattttcataatatattttgcataagctcaa 22515608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 557
Target Start/End: Complemental strand, 44613444 - 44613396
Alignment:
Q  509 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||| ||||||||| ||| || |||||| ||||||||||||||||    
T  44613444 ataaaagcttatttatttgcataagctatttttcataagctcaatccaa 44613396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 377 - 557
Target Start/End: Complemental strand, 41229064 - 41228883
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| | ||||||||| |||||||||||||| ||||||||| | | ||| ||||||| ||||||  | ||||||  |||    
T  41229064 ggattgagcttatgaaaaatagcttatgcaaataaattagcttttatattaattcataagttctaactaatgaaaattgtatcttcatcagttgtttttt 41228965  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||||  ||||||||||| ||||||| |||||||||| ||||||  | ||| || | |||||||||||||||||||||    
T  41228964 cataaactaccttaacaagcttatgaataataaataaaagcctatttacctgcataagctgttttgcataagctcaatccaa 41228883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 43499300 - 43499402
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||| || ||||||||| |||| ||||||||    
T  43499300 ttttggcactcttgtaattgactcttttagctggggttttggcactccttgtgctgaaatctccaagctttcagtattttaatccattttagtttcttaa 43499399  T
Q  307 aaa 309  Q
    |||    
T  43499400 aaa 43499402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 39059821 - 39059718
Alignment:
Q  206 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 305  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||| | ||||||||||| ||| ||| |||||| |||||||||||| |||| |||||||    
T  39059821 gttttgacattcttgtaattaactctttcagcttgggttttggcactgcttgtgctgaattcttcagactttcagtaatttaatccattttagtttctta 39059722  T
Q  306 aaaa 309  Q
    ||||    
T  39059721 aaaa 39059718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 383 - 557
Target Start/End: Original strand, 46704201 - 46704375
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | ||||||| |||  ||||||||||| ||||||||| | | ||| ||||||||||||||  |||| |||  |||||||||    
T  46704201 agcttatgaaaaataacttatgcaaataagtaactttttatattaattcataagttctcactaatgaaaattttatcttcataagctgttttttcataaa 46704300  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||  ||||||||||  ||||||| |||||||||| || |||||| ||| |||| |||| ||||||||||||||||    
T  46704301 ctaccttaacaagctcatgaataataaataaaagctta-ttatttgcataagttgttttacataagctcaatccaa 46704375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 380 - 516
Target Start/End: Original strand, 18630823 - 18630960
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | | ||||||||| ||||||||  |||| |||  ||||||    
T  18630823 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacgaaaactttatcttcataagctgttttttcat 18630922  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagc 516  Q
    ||||||  ||||||||||  || |||| ||||||||||    
T  18630923 aaactaccttaacaagctcatggataataaataaaagc 18630960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 36651837 - 36651736
Alignment:
Q  208 tttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaa 307  Q
    ||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||  |||||  || ||||||||| |||| ||||| |||    
T  36651837 tttggcactcttgtaactgactcttttagctggggttttggcactccttgtgctgaaatctccaaactttcgatattttaatccattttagtttctaaaa 36651738  T
Q  308 aa 309  Q
    ||    
T  36651737 aa 36651736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 385 - 552
Target Start/End: Complemental strand, 29877792 - 29877624
Alignment:
Q  385 cttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaact 483  Q
    ||||||||||||| ||| | |||||| |||||||||||| |||| ||||||||| | | |||| |||||| ||||||  |||| ||   |||||||||||    
T  29877792 cttatgaaaaatagcttatgcaaatatataagcttttatgttaattcataagttctcactaacaaaaattgtatcttcataagctgctttttcataaact 29877693  T
Q  484 attttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    |  ||| ||||||| ||||||| | |||||||| ||||||||| ||| | || ||||||||||||||||    
T  29877692 accttagcaagcttatgaataatacataaaagcttatttatttgcataaattgttttgcataagctcaa 29877624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 9896606 - 9896503
Alignment:
Q  206 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 305  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||| |||| ||||  |||||| |||||| ||||| |||| ||||||     
T  9896606 gttttggcattcttgcaattgactttttcatctggggttttggcactccttgtgcttaaatttccaagctttcactaattttatccattttagtttcttc 9896507  T
Q  306 aaaa 309  Q
    ||||    
T  9896506 aaaa 9896503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 552
Target Start/End: Complemental strand, 23297593 - 23297423
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | |||||||||||||||||||  ||| ||||||||| |   |||| |||||| ||||||  |||| |||   |||||    
T  23297593 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatcttcataagctgt---ttcat 23297497  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||| ||| ||||||| | |||||||| ||||||||| ||| || ||||||||||||||||||    
T  23297496 aaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagctattttgcataagctcaa 23297423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 48591352 - 48591499
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | ||||||||||||||||||  |||| ||||||||| | ||||||||||||| ||||||  |||| |||  ||||||    
T  48591352 ttgagcttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttctcattaacgaaaattgtatcttcataagctgttttttcat 48591451  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  || |||||| | ||||||| | |||||| | |||||||||    
T  48591452 aaactaccttgacaagcgtatgaataatatataaaaacttatttattt 48591499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 37870726 - 37870640
Alignment:
Q  224 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaattt-cttaaaaa 309  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||||| |||| ||| ||||||||    
T  37870726 ttgactctttcagctggggttttggcactccttgtgctgaaatctccagactttgagtaatataatccattttagtttacttaaaaa 37870640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 404 - 524
Target Start/End: Complemental strand, 36298465 - 36298344
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt-cataaactattttaacaagcttgtgaa 502  Q
    ||||||||||| |||||||||||| ||||||||||| |||||| |||| ||||||||  ||| ||||  ||| ||||||||||||||||||  || | ||    
T  36298465 caaataaataaacttttatattaattcataagttttcattaacaaaaaatttatcttcataaattgttttttccataaactattttaacaaagttataaa 36298366  T
Q  503 taaaaaataaaagcgtatttat 524  Q
    ||| |||||||||| |||||||    
T  36298365 taacaaataaaagcatatttat 36298344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 405 - 552
Target Start/End: Original strand, 18424232 - 18424378
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 504  Q
    |||||||||||||||||| |||| ||||||||||| | |||| |||||| ||||||  ||| ||||  ||||||||||||  || ||||| || ||||||    
T  18424232 aaataaataagcttttatgttaattcataagttttcaataacaaaaattgtatcttcataaattgt-ttttcataaactaccttcacaagtttatgaata 18424330  T
Q  505 aaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    | | |||||||| |||||||||  || | || ||||||||||||||||    
T  18424331 atacataaaagcttatttatttgtataaattgttttgcataagctcaa 18424378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 463 - 557
Target Start/End: Original strand, 212960 - 213053
Alignment:
Q  463 taagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    ||||||||  ||||||||||||  ||||||||||| ||||||| |||||||| | ||||||||| ||| |||| |||||||||||||||||||||    
T  212960 taagttgttttttcataaactaccttaacaagcttatgaataataaataaaa-cttatttatttgcataagttgttttgcataagctcaatccaa 213053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 2547975 - 2548122
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||| ||| | ||| | |||||||||||| ||||||||||| | ||||||| | |||| |||||||||||||||  ||| ||||  ||||||    
T  2547975 ttgagcttatgagaaagagcttatgcaaataaataagtttttatattaatttataagttctcattagcgaaaattttatcttcataaattgttttttcat 2548074  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  |||| | |||  ||||||| |||||||| | |||||||||    
T  2548075 aaactaacttaataggctcatgaataacaaataaaaacttatttattt 2548122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 514
Target Start/End: Complemental strand, 17222987 - 17222852
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | |||||||||||| |||||| |||| ||||||||| | | ||||||||||| ||||||  |||  |||  ||||||    
T  17222987 ttgagcttatgaaaaatagcttattcaaataaataagtttttatgttaattcataagttctaactaacgaaaattgtatcttcataatctgttttttcat 17222888  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaa 514  Q
    ||||||  || |||||||| ||||||| | ||||||    
T  17222887 aaactaccttgacaagcttatgaataatacataaaa 17222852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 526
Target Start/End: Complemental strand, 897103 - 896981
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||||||||||||||| | ||||||||| | ||||||||||  |||||   ||| ||||  ||||||||||||  || |||||||| |||||    
T  897103 caaataaataagcttttatattaatttataagttttcactaacgaaaatcgtatctacgtaaattgttttttcataaactacattgacaagcttatgaat 897004  T
Q  504 aaaaaataaaagcgtatttattt 526  Q
    || | |||||||  |||||||||    
T  897003 aatacataaaagtttatttattt 896981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 7743575 - 7743677
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    ||||| || |||||||||||||||||| ||||   ||||||||| ||||||||||||||||||||  |||||| |  ||||||||| |||| ||| ||||    
T  7743575 ttttgacactcttgtaattgactcttttagcttaagttttggcactccttgtgctgaaatctccatgctttcagttttttaatccattttagtttattaa 7743674  T
Q  307 aaa 309  Q
    |||    
T  7743675 aaa 7743677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 549
Target Start/End: Original strand, 42611799 - 42611966
Alignment:
Q  383 agcttatgaaaaatatcttta--caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 480  Q
    |||||||||||||||  ||||  ||||||||||||||||||| |||| ||||||||| | | | ||||||| | ||||||  ||||||||  ||||||||    
T  42611799 agcttatgaaaaatagatttatgcaaataaataagcttttatgttaattcataagttgtcact-acgaaaactgtatcttcataagttgttttttcataa 42611897  T
Q  481 actattttaacaagcttgtgaataaaaaata-aaagcgtatttattttcattagttattttgcataagct 549  Q
    ||||  |  |||||||| ||||||| | ||| ||||| ||||||||| ||| |||| |||||||||||||    
T  42611898 acta-ctcgacaagcttatgaataatacatataaagcttatttatttgcataagttgttttgcataagct 42611966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 552
Target Start/End: Original strand, 7206578 - 7206687
Alignment:
Q  443 taacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgc 542  Q
    ||||||||| ||||||||  ||||||||  ||||||||||||  |||||| ||| |||||||| |||||||||| |||| |||| ||| || | || |||    
T  7206578 taacgaaaactttatcttcataagttgttttttcataaactaccttaacaggctcgtgaataataaataaaagcttattcatttgcataagctgttctgc 7206677  T
Q  543 ataagctcaa 552  Q
    ||||||||||    
T  7206678 ataagctcaa 7206687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 557
Target Start/End: Original strand, 8057017 - 8057194
Alignment:
Q  381 tgagcttatgaaaaata-tctttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 479  Q
    |||||||||||||| || ||| | |||| ||||||| ||||||||||| | ||||||| | |  ||| || ||| ||||||  ||| | ||  |||| ||    
T  8057017 tgagcttatgaaaattagtctatccaaacaaataagtttttatattaatttataagttctcacgaacaaatattgtatcttcataaatcgttttttctta 8057116  T
Q  480 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    | |||  || |||||||| ||||||| |||||||| | ||||| ||| ||||||||||||| ||||||||||||||||    
T  8057117 agctaccttgacaagcttatgaataataaataaaaacttatttttttgcattagttatttttcataagctcaatccaa 8057194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 383 - 526
Target Start/End: Complemental strand, 36741059 - 36740915
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | ||||||||||||||||| | || | ||||||||| | | ||| ||||||| ||||||  | |  |||| |||||||||    
T  36741059 agcttatgaaaaatagcttatgcaaataaataagcttttgtgttgattcataagttctcactaatgaaaattgtatcttcatgaactgtattttcataaa 36740960  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||| ||| |||||||| || |||| | |||||||| |||||||||    
T  36740959 ctactttgacaagcttatgcataatatataaaagcttatttattt 36740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 552
Target Start/End: Original strand, 38345776 - 38345922
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 504  Q
    |||||||||||||||||| |||| ||||||||| |   |||  |||||| ||||||  ||||||||  |||||||||||| ||| |||| ||| ||||||    
T  38345776 aaataaataagcttttatgttaattcataagttctggctaataaaaattgtatcttcataagttgttttttcataaactactttgacaa-cttatgaata 38345874  T
Q  505 aaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
      | |||||||| |||||||||  || || | ||||||||||||||||    
T  38345875 ctacataaaagcttatttatttggataagctgttttgcataagctcaa 38345922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 526
Target Start/End: Complemental strand, 7148905 - 7148783
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||||||||||  ||| ||||||||| | | ||| ||||||| ||| ||| |||| |||  ||||| ||||||  || |||||||| |||||    
T  7148905 caaataaataagcttttatgctaattcataagttctgactaaagaaaattgtatttttataagctgttttttcaaaaactaccttgacaagcttatgaat 7148806  T
Q  504 aaaaaataaaagcgtatttattt 526  Q
    || | |||||||| |||||||||    
T  7148805 aatacataaaagcttatttattt 7148783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 23106842 - 23106768
Alignment:
Q  215 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaat 289  Q
    |||||||| ||||||||||||  ||||||||||||| ||||| ||||||||||||||  |||||| |||| ||||    
T  23106842 ttcttgtatttgactctttcaaatggggttttggcactccttatgctgaaatctccatactttcagtaatataat 23106768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 549
Target Start/End: Original strand, 12495572 - 12495744
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||| || ||| | |||||||||||| |||||| |||| | ||||||| | | ||| ||| ||| ||||||  | || |||  ||||||    
T  12495572 ttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcat 12495671  T
Q  479 aaacta--ttttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 549  Q
    ||||||  |||| |||||||| ||||||| | |||||||| ||||||||| ||| || | |||||| ||||||    
T  12495672 aaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataagctgttttgcttaagct 12495744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 557
Target Start/End: Complemental strand, 11298740 - 11298573
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||| ||| || |||||| | | ||||||||| ||||||||           | |||||    
T  11298740 ttgagcttatgaaaaatagcttatgcaaataaataaacttttataataattcttaagttctcactaacgaaaactttatctt-----------cattcat 11298652  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    ||||||  |||| |||||  ||||||| |||||||||| || ||| || ||| || | |||||||||||||||||||||    
T  11298651 aaactaccttaagaagctcatgaataataaataaaagcttaattacttgcataagctgttttgcataagctcaatccaa 11298573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 42718574 - 42718678
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttg-tgctgaaatctccagcctttcattaatttaatccagtttaattt-ctt 304  Q
    |||||||| |||| ||||| ||||||| ||| |||||||| ||| |||||| ||||||||||||||| |||||| |  ||||||||| |||| ||| |||    
T  42718574 ttttggcactcttataattaactcttttagccggggttttagcactccttggtgctgaaatctccaggctttcagttttttaatccattttagtttactt 42718673  T
Q  305 aaaaa 309  Q
    |||||    
T  42718674 aaaaa 42718678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 54898975 - 54898883
Alignment:
Q  217 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    ||||||||||||||||||||||| ||||||| || ||||| | || |||||||||  |||||| |||| || | || ||||| ||||||||||    
T  54898975 cttgtaattgactctttcagctgaggttttgacactccttatactaaaatctccaaactttcagtaatatatttcattttaacttcttaaaaa 54898883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 431 - 526
Target Start/End: Original strand, 43983362 - 43983457
Alignment:
Q  431 ataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||| ||||||||||||||||| ||| ||| ||||||||  ||| ||||||||| ||||||||||| | ||||| | || || || |||||||||    
T  43983362 ataagattttattaacgaaaattgtatgtttataagttgtttttttataaactatcttaacaagcttataaataatacattaatgcttatttattt 43983457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 48721955 - 48721897
Alignment:
Q  402 tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||||||||||| ||||||||| | | |||| |||||| ||||||    
T  48721955 tacaaataaataagcttttatattaattcataagttctcactaacaaaaattatatctt 48721897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 549
Target Start/End: Complemental strand, 948136 - 948060
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 549  Q
    ||||||||||||  || ||||  || ||||||| | |||||||| ||||||||||||| || |||||||||||||||    
T  948136 tttcataaactaccttgacaaagttatgaataatacataaaagcttatttattttcataagctattttgcataagct 948060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 552
Target Start/End: Complemental strand, 3564284 - 3564205
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||||||||  || |||| ||| ||||||| | |||||||  ||||||||||||| || | ||||||||||||||||    
T  3564284 tttcataaactaccttgacaaacttatgaataatatataaaagtttatttattttcataagctgttttgcataagctcaa 3564205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 453
Target Start/End: Complemental strand, 8130634 - 8130563
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    ||||||||||||||| ||| | |||||||||||| |||||| |||| ||||||||||| | |||| ||||||    
T  8130634 agcttatgaaaaatagcttgtgcaaataaataagtttttatgttaattcataagttttcactaacaaaaatt 8130563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 552
Target Start/End: Original strand, 43699505 - 43699584
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||||||||  || |||||||| ||||||| | |||||||| |||||||||  || |||| |||| |||||||||||    
T  43699505 tttcataaactacattgacaagcttatgaataagacataaaagcttatttatttgtataagttgtttttcataagctcaa 43699584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 557
Target Start/End: Complemental strand, 46175953 - 46175902
Alignment:
Q  506 aaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||| || ||||||||| ||| ||||||||| ||||||||||||||||    
T  46175953 aaaataaatgcttatttatttacataagttatttttcataagctcaatccaa 46175902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 14987528 - 14987602
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    ||||| |||||||||| | ||| || ||||||||||| ||||||||||| ||||||||| | | |||||||||||    
T  14987528 ttgagtttatgaaaaacagcttatataaataaataagtttttatattaattcataagttctcactaacgaaaatt 14987602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 30956839 - 30956782
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttt 439  Q
    ||||||||||||||| ||| | |||||||||||| ||||| ||||| |||||||||||    
T  30956839 agcttatgaaaaatagcttatgcaaataaataagtttttacattaattcataagtttt 30956782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 480
Target Start/End: Complemental strand, 31022558 - 31022457
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||| |||||||||| | ||| | ||||||||||||| ||||  |||| ||||||||||| | | ||||||||| ||||||| |||| |||  ||||||    
T  31022558 ttgagattatgaaaaacaacttatgcaaataaataagcatttaccttaattcataagttttcactgacgaaaattgtatctttataagctgttttttcat 31022459  T
Q  479 aa 480  Q
    ||    
T  31022458 aa 31022457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 483
Target Start/End: Complemental strand, 35405838 - 35405738
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| | || || | ||| ||||||||||| ||||||  |||| |||  |||||||||    
T  35405838 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattaat-aggtcttactaacgaaaattctatcttcataagctgttttttcataaa 35405740  T
Q  482 ct 483  Q
    ||    
T  35405739 ct 35405738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 452
Target Start/End: Original strand, 42617158 - 42617231
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaat 452  Q
    |||||||||||||||||| ||| |  ||||||||||| |||||| |||| | ||||||||| | ||||||||||    
T  42617158 ttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagttttcactaacgaaaat 42617231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 47202983 - 47202902
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| || |||||| ||||||||||| |||| | ||||| | | | ||||||||||| ||||||    
T  47202983 ttgagcttatgaaaaataacttatataaataagtaagcttttattttaatttataagatctcactaacgaaaattgtatctt 47202902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 484
Target Start/End: Original strand, 22397258 - 22397338
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaacta 484  Q
    ||||||| ||||||||||  |||| ||||||| | ||| ||||||||||| ||| ||  ||||||||  ||||||||||||    
T  22397258 caaataattaagcttttaagttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacta 22397338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 24031213 - 24031165
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaat 452  Q
    |||||||| || |||||||||||| ||||||||| ||||||| ||||||    
T  24031213 caaataaaaaaacttttatattaattcataagttcttattaaagaaaat 24031165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 34526267 - 34526323
Alignment:
Q  382 gagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 437  Q
    ||||||||||||||||  || | ||||||||||||||||||| |||| |||||||||    
T  34526267 gagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataagtt 34526323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 552
Target Start/End: Original strand, 43415242 - 43415390
Alignment:
Q  405 aaataaataagcttttatattaactcataagttttt-attaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||  |||||| |||| |||||||||||| | |||| || ||| ||||||  ||| ||||  |||| |||||||  ||||||| ||| |||||    
T  43415242 aaataaataaatttttatgttaattcataagtttttcactaacaaatattatatcttgataaattgttttttcgtaaactacattaacaaccttatgaat 43415341  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    || | |||||| | ||||||||| ||  |||| |||| | |||||||||    
T  43415342 aatacataaaaacttatttatttgcagaagttgttttacttaagctcaa 43415390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 460
Target Start/End: Original strand, 46175904 - 46175988
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    ||||||||||||||||||||| ||| |  |||||||||||| ||||| |||| | ||||| | ||| || |||||||| ||||||    
T  46175904 ggattgagcttatgaaaaataacttatgtaaataaataagcatttattttaatttataagctcttactagcgaaaattgtatctt 46175988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 7e-32; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 377 - 557
Target Start/End: Original strand, 9572709 - 9572891
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | | |||| |||| ||||||||  ||| ||||  |||    
T  9572709 ggattgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacaaaaactttatcttcataaattgtttttt 9572808  T
Q  476 cataaactattttaacaagcttgtgaataaaaaat-aaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||||  ||||||| ||| ||||||| |||| |||||| ||||||||| ||  || | |||||||||||||||||||||    
T  9572809 cataaactaccttaacaaacttatgaataataaataaaaagcttatttatttgcaaaagctgttttgcataagctcaatccaa 9572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 33766359 - 33766461
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    ||||| || |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||| ||||||||    
T  33766359 ttttgacactcttgtaattgactcttttaactggggttttggcactccttgtgctgaaatctccagactttcagtattttaatccattttagtttcttaa 33766458  T
Q  307 aaa 309  Q
    |||    
T  33766459 aaa 33766461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 377 - 557
Target Start/End: Original strand, 46689475 - 46689656
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| | ||||||||||| || ||||||||| ||||||||| | | ||||||||||||||| ||  ||||||||  | |    
T  46689475 ggattgagcttatgaaaaataacttatgcaaataaataaactattatattaattcataagttctcactaacgaaaattttattttcataagttgttttat 46689574  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
     ||||| ||  ||||||||||  ||||||| |||||||||| | ||||||| ||| |  | |||||||||||||||||||||    
T  46689575 tataaaataccttaacaagctcatgaataataaataaaagcttttttatttgcataaactgttttgcataagctcaatccaa 46689656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 404 - 552
Target Start/End: Complemental strand, 46473227 - 46473079
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||  ||||||||  ||||||| ||||  |||| || ||  |||||    
T  46473227 caaataaataagattttatattaattcataagttcttattaacgaaaactttatcttcataagttgttttttcatatactaccttaaaaacctcatgaat 46473128  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    || |||||||||| ||||||||| ||  || | ||||||||||||||||    
T  46473127 aataaataaaagcttatttatttacacaagctgttttgcataagctcaa 46473079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 19227976 - 19227894
Alignment:
Q  215 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 297  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  19227976 ttcttgtatttgactctttcagctggggttttggcactccttgtgctgaaatctccaggctttcagtaatataatccatttta 19227894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 51534575 - 51534473
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||  || ||||||||| |||| |||||| |    
T  51534575 ttttggcactcttgtaattgactcttttagcaggggttttggcactccttgtgctgaaatctccaggctttcggtattttaatccattttagtttcttta 51534476  T
Q  307 aaa 309  Q
    |||    
T  51534475 aaa 51534473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 380 - 552
Target Start/End: Complemental strand, 13039105 - 13038932
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||| ||||||||||||| ||| | ||||||||||| |||||||||||| |||||| || | | ||||||||| ||||||||  ||||||||  ||||||    
T  13039105 ttgaacttatgaaaaatagcttatgcaaataaataaacttttatattaattcataacttctcactaacgaaaactttatcttcataagttgttttttcat 13039006  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  ||||||||||  ||||||| | |||||||| ||||||||| ||| ||   |||||||||| |||||    
T  13039005 aaactaccttaacaagctcatgaataatatataaaagcttatttatttgcatcagccgttttgcataacctcaa 13038932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 4532175 - 4532087
Alignment:
Q  216 tcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctt 304  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||| ||||||    
T  4532175 tcttgtaattgactcttttacctggggttttggcactccttgtgctgaaatctccagactttcagtattttaatccattttagtttctt 4532087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 33936450 - 33936538
Alignment:
Q  221 taattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||| |||| ||||||| ||||| ||||||||||    
T  33936450 taattgactctttcagctgggattttggcactccttgtcctgaaatctccagactttcagtaatataatccattttaacttcttaaaaa 33936538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 526
Target Start/End: Complemental strand, 26988306 - 26988159
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||||||  || | ||||||||| ||||||||| |||| ||||||||||||| |||||| |||| ||||||  |||| |||  ||||||    
T  26988306 ttgagcttatgaaaaatagtttatgcaaataaattagcttttatgttaattcataagtttttactaacgacaattgtatcttcataagctgttttttcat 26988207  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  || |||||||| ||||||| | |||||||| |||||||||    
T  26988206 aaactaccttgacaagcttatgaataagacataaaagcttatttattt 26988159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 526
Target Start/End: Complemental strand, 28122776 - 28122627
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttt--tattaacgaaaattttatctttctaagttgtactttc 476  Q
    ||||||||||||||||||  || |  ||||||||||||||||||||||| ||| |||||||  || ||||||||||||||||||| |||||| |  ||||    
T  28122776 ttgagcttatgaaaaatagtttatgaaaataaataagcttttatattaattcagaagttttcttactaacgaaaattttatctttataagttattttttc 28122677  T
Q  477 ataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||||  |||| |||||  ||||||| ||||||||||  ||||||||    
T  28122676 ataaactaccttaagaagctcatgaataataaataaaagctaatttattt 28122627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 404 - 549
Target Start/End: Complemental strand, 4068248 - 4068103
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||| |||||||||||| ||||||||| | | ||||||||||  ||||||  ||||||||  ||||||||||||  || |||||||| |||||    
T  4068248 caaataaataaacttttatattaattcataagttctcactaacgaaaatagtatcttcataagttgttttttcataaactaccttgacaagcttatgaat 4068149  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagct 549  Q
    || | |||||||| ||||||||| ||  || ||||||||| |||||    
T  4068148 aatacataaaagcttatttatttgcacaagctattttgcaaaagct 4068103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 13182647 - 13182749
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||| |||||||||||||||||||| || ||||||||||||| ||||| | ||||||| ||||| |||||| || ||||||| | ||||||||||| |    
T  13182647 ttttggaattcttgtaattgactcttttagttggggttttggcactccttatactgaaatttccaggctttcagtattttaatctattttaatttcttca 13182746  T
Q  307 aaa 309  Q
    |||    
T  13182747 aaa 13182749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 34549383 - 34549456
Alignment:
Q  224 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 297  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  34549383 ttgactctttcagctggggttttggcactccttgtgctgaaatctccagacttttagtaatataatccatttta 34549456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 45432454 - 45432381
Alignment:
Q  224 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 297  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  45432454 ttgactctttcagctggggttttggcactccttgtgctgaaatctccagacttttagtaatataatccatttta 45432381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 526
Target Start/End: Original strand, 36422906 - 36423056
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||| |||||||| |||| ||| | ||||||||||| |||||||||||  | |||| || | | |||||||| |||||||||  ||||||||   ||    
T  36422906 ggattgatcttatgaagaataacttatgcaaataaataaacttttatattattttataacttctcactaacgaaatttttatcttcataagttgtttatt 36423005  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    |||||||||  ||||||| ||| ||||||| |||||||||| |||||||||    
T  36423006 cataaactaccttaacaaacttatgaataataaataaaagcttatttattt 36423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 381 - 525
Target Start/End: Original strand, 15515276 - 15515421
Alignment:
Q  381 tgagcttatgaaaaatatctttac-aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 479  Q
    ||||||||||||||||| ||| |  ||||||||||||||| || |||| ||||||||| | | ||||||||||| ||||||  |||| | |  |||||||    
T  15515276 tgagcttatgaaaaatagcttaagtaaataaataagctttcatgttaattcataagttctcactaacgaaaattgtatcttcataagctcttttttcata 15515375  T
Q  480 aactattttaacaagcttgtgaataaaaaataaaagcgtatttatt 525  Q
    |||||  || |||||||| ||||||| | |||||||| ||||||||    
T  15515376 aactaccttgacaagcttatgaataatacataaaagcttatttatt 15515421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 504
Target Start/End: Complemental strand, 37712225 - 37712100
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||| |||||||| ||| | ||||||||||| ||||||| |||| ||||||||| ||| |||||||| || ||||||  ||||||||  ||||||    
T  37712225 ttgagcttacgaaaaatagcttatgcaaataaataaacttttatgttaattcataagttcttactaacgaaagttgtatcttcataagttgttttttcat 37712126  T
Q  479 aaactattttaacaagcttgtgaata 504  Q
    ||||||  || |||||||| ||||||    
T  37712125 aaactaccttgacaagcttatgaata 37712100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 404 - 543
Target Start/End: Original strand, 35282547 - 35282686
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||  |||||||||||| ||||||||||| | |||  |||||||||||||  ||||||||  ||||||||||||  |||||| | || | |||    
T  35282547 caaataaatagacttttatattaattcataagttttcactaattaaaattttatcttcataagttgttttttcataaactaccttaacatgtttataaat 35282646  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgca 543  Q
    || ||||||| || ||||||||| ||| || | |||||||    
T  35282647 aataaataaacgcttatttatttgcataagctgttttgca 35282686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 37329340 - 37329487
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| |||| | ||||||| | |  |||||||||| ||||||  |||| |||  ||||||    
T  37329340 ttgagcttatgaaaaataacttatgcaaataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatcttcataagctgttttttcat 37329439  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  || ||||| || ||||||| | ||||||||  ||||||||    
T  37329440 aaactaccttgacaagtttatgaataatacataaaagctcatttattt 37329487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 550
Target Start/End: Complemental strand, 51162402 - 51162256
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||| ||| ||||||| |||| | ||||| | ||||||||||||||| ||| ||  ||||||||  ||||||||||||  ||||||| ||||| |||    
T  51162402 caaataattaaacttttatgttaatttataagatcttattaacgaaaattgtatattcataagttgttttttcataaactaccttaacaaacttgtaaat 51162303  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagctc 550  Q
    || | || || || ||||||||| ||| || || |||||||||||||    
T  51162302 aatacattaatgcttatttatttgcataagctactttgcataagctc 51162256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 402 - 550
Target Start/End: Complemental strand, 12256741 - 12256594
Alignment:
Q  402 tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtga 501  Q
    |||||||||||||  |||||| |||| ||||||||| ||| ||||||||||| || |||  ||| ||||  ||||||||||||  | ||||| ||| | |    
T  12256741 tacaaataaataaatttttattttaattcataagttcttactaacgaaaattgtaccttcataaattgt-ttttcataaactacatcaacaatcttataa 12256643  T
Q  502 ataaaaaataaaagcgtatttattttcattagttattttgcataagctc 550  Q
    |||| | |||||||| || |||||| ||| |||| ||||||||||||||    
T  12256642 ataatatataaaagcataattatttacataagttgttttgcataagctc 12256594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 552
Target Start/End: Original strand, 26946058 - 26946206
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 504  Q
    ||||||| |||||||| || ||| ||| ||||| | | ||| ||||||| ||||||  ||||||||  ||||||||||||  ||||||||||| ||||||    
T  26946058 aaataaacaagcttttgtactaattcacaagttgtcactaaggaaaattgtatcttcataagttgttttttcataaactaccttaacaagcttatgaata 26946157  T
Q  505 aaaaat-aaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    | | || |||||| ||||||||| ||| ||   ||||||||||||||||    
T  26946158 acacataaaaagcttatttatttacataagccgttttgcataagctcaa 26946206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 383 - 526
Target Start/End: Complemental strand, 48819454 - 48819310
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||||| | | |||| |||| | ||||||  |||| |||  |||||||||    
T  48819454 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacaaaaaatgtatcttcataagctgttttttcataaa 48819355  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    |||  || |||||||| ||||||| | || |||||  ||||||||    
T  48819354 ctaccttgacaagcttatgaataatacattaaagctcatttattt 48819310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 549
Target Start/End: Complemental strand, 10365325 - 10365159
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | ||||| ||||||||||||| |||| | | ||||||||| ||||||||||| ||| ||  |  |||||  |||||||||    
T  10365325 agcttatgaaaaatagcttatgcaaatgaataagcttttatgttaatttaaaagtttttactaacgaaaattgtatattcatcggttgt-ttttcataaa 10365227  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 549  Q
    ||| ||| |||||||| | ||||| | |||||||  |||| |||| ||| | ||||||| ||||||||    
T  10365226 ctactttgacaagcttattaataatacataaaagtttattcatttgcataaattattttacataagct 10365159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 16888897 - 16889040
Alignment:
Q  380 ttgagcttatgaaaaatatctttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 479  Q
    ||||||||||||||||| | |   ||||||||||||||||||| |||| |||||| || | | ||| ||||||| ||||||  |||| |||  |||||||    
T  16888897 ttgagcttatgaaaaatttatg--caaataaataagcttttatgttaagtcataaattctcactaatgaaaattgtatcttcataagctgttttttcata 16888994  T
Q  480 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    |||||  || |||||||| ||||||| | |||||||| |||||||||    
T  16888995 aactacctt-acaagcttatgaataatacataaaagcttatttattt 16889040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 550
Target Start/End: Complemental strand, 49971345 - 49971238
Alignment:
Q  443 taacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgc 542  Q
    ||||||||||| ||||||  |||| |||  ||||||||||||  ||||||||||| | ||||| ||||||| |  ||||||||| ||| |||| ||||||    
T  49971345 taacgaaaattgtatcttcgtaagctgttttttcataaactacattaacaagcttataaataataaataaaggaatatttatttgcataagttgttttgc 49971246  T
Q  543 ataagctc 550  Q
    ||||||||    
T  49971245 ataagctc 49971238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 526
Target Start/End: Original strand, 6337709 - 6337831
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||| |||||||||||||| |||| ||||||||| |   |||| |||||| ||||||  |||| |||  ||||||||||||  || |||||||| |||||    
T  6337709 caaacaaataagcttttatgttaattcataagttctcgctaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaat 6337808  T
Q  504 aaaaaataaaagcgtatttattt 526  Q
    || | |||||||| |||||||||    
T  6337809 aatacataaaagcttatttattt 6337831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 453
Target Start/End: Original strand, 10849999 - 10850068
Alignment:
Q  385 cttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    ||||||||||||| ||| |||||||||||||||||| || |||| | ||||||||| |||||||||||||    
T  10849999 cttatgaaaaataacttatacaaataaataagctttcatgttaatttataagttttcattaacgaaaatt 10850068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 12828257 - 12828145
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatc--tttctaagttgtactttcataaactattttaacaagcttgtga 501  Q
    |||||| |||| ||||||||||||   ||||||||| ||||||||||||||||||  ||| ||||||||  ||||||||||||  |||| ||  || |||    
T  12828257 caaatagataaacttttatattaatctataagttttcattaacgaaaattttatctttttataagttgttttttcataaactaccttaaaaattttatga 12828158  T
Q  502 ataaaaaataaaa 514  Q
    |||| ||||||||    
T  12828157 ataacaaataaaa 12828145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 557
Target Start/End: Complemental strand, 25485881 - 25485728
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||  ||||||||||| | |||| |||| | || |||||||||||||||  ||| ||||  ||||||||||||  |||| ||| |  |||||    
T  25485881 caaataaataaatttttatattaatttataaattttcactagcgaaaattttatcttcataaattgttttttcataaactaccttaataaggtcatgaat 25485782  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    || ||||||||   ||||||||| ||| || | ||||| ||||| |||||||||    
T  25485781 aacaaataaaaatttatttatttgcataagctcttttgtataagttcaatccaa 25485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 484
Target Start/End: Original strand, 36259244 - 36259324
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaacta 484  Q
    |||||||||||||||||||||||| | |||||| || ||||||||||||| ||| ||| |||  |||  ||||||||||||    
T  36259244 caaataaataagcttttatattaatttataagtcttcattaacgaaaattgtatgtttataaactgttttttcataaacta 36259324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 1565303 - 1565345
Alignment:
Q  380 ttgagcttatgaaaaatatctttacaaataaataagcttttat 422  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  1565303 ttgagcttatgaaaaatagctttgcaaataaataagcttttat 1565345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 35897547 - 35897718
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttc-- 476  Q
    |||| ||||||||||||| ||| |  |||||||||| ||||||| |||| | |||| |||| | ||| ||||||| |||| || |||||| |  ||||      
T  35897547 ttgaacttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataaattttcactaatgaaaattgtatcgttataagtttttttttcct 35897646  T
Q  477 --ataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataa 546  Q
      |||||||| ||| | |||||| ||||||| |||||||| | ||||||||| ||| |||| ||||||||||    
T  35897647 tcataaactactttgaaaagcttatgaataataaataaaaacttatttatttgcataagttgttttgcataa 35897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 15791541 - 15791460
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| |||| | ||||| | | ||||||||||||| ||||||    
T  15791541 ttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataagctctcattaacgaaaattgtatctt 15791460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 540
Target Start/End: Complemental strand, 26543106 - 26542970
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttct-aagttgtactttcataaactattttaacaagcttgtgaa 502  Q
    |||||||||||  ||| || |||||| ||||||||| | ||||||||||| || |||||| |||||||  ||||||||||||  ||||||| ||| |  |    
T  26543106 caaataaataaattttaatcttaacttataagttttcactaacgaaaattgta-ctttcttaagttgttttttcataaactacattaacaaacttatata 26543008  T
Q  503 taaaaaataaaagcgtatttattttcattagttatttt 540  Q
    ||| | |||||||| ||||||||| ||| |||| ||||    
T  26543007 taatacataaaagcatatttatttgcataagttgtttt 26542970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 526
Target Start/End: Original strand, 3069809 - 3069929
Alignment:
Q  406 aataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataa 505  Q
    ||||||||||||||||| |||| ||||||||| | | ||  ||||||| ||||||  |||| |||  ||||||||||||  || |||||||| |||||||    
T  3069809 aataaataagcttttatgttaattcataagttctcactagtgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataa 3069908  T
Q  506 aaaataaaagcgtatttattt 526  Q
     | || ||||| || ||||||    
T  3069909 tacattaaagcttacttattt 3069929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 460
Target Start/End: Complemental strand, 19395935 - 19395851
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    ||||||||||||||||||||| ||| || | ||||||||| |||||| |||| | ||||| ||| | ||||||||||| ||||||    
T  19395935 ggattgagcttatgaaaaatagcttatatatataaataagtttttattttaatttataagctttcactaacgaaaattgtatctt 19395851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 50919620 - 50919564
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||| || |||| | || |||||||||||||||||||| ||||||    
T  50919620 caaataaataagctttcatgttaatttattagtttttattaacgaaaattgtatctt 50919564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 514
Target Start/End: Original strand, 41196638 - 41196773
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||| |||||| ||| | ||||||||||||| ||||| |||| ||| ||| | | | |||| |||||| ||||||  |||| |||  ||||||    
T  41196638 ttgagcttatgtaaaatagcttatgcaaataaataagcctttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcat 41196737  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaa 514  Q
    ||||||  || |||||||| ||||||| | ||||||    
T  41196738 aaactacattgacaagcttatgaataatacataaaa 41196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 5347312 - 5347238
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| ||||   ||||||| | |||||||||||||    
T  5347312 ttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgattaacgaaaatt 5347238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 437
Target Start/End: Complemental strand, 10082385 - 10082351
Alignment:
Q  403 acaaataaataagcttttatattaactcataagtt 437  Q
    ||||||||||||||||||||||||| |||||||||    
T  10082385 acaaataaataagcttttatattaattcataagtt 10082351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 3115990 - 3116071
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  |||||| ||||||||||| |||| | ||||| | ||| ||||||||||| ||||||    
T  3115990 ttgagcttatgaaaaataacttatgtaaataagtaagcttttattttaatttataagatcttactaacgaaaattgtatctt 3116071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 20505672 - 20505757
Alignment:
Q  231 tttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaataaacaa 316  Q
    ||||||||||| |||| ||| | ||||||||||||| | ||| | |||| |||| || |||| ||||| |||||||||| ||||||    
T  20505672 tttcagctgggtttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattccattttaacttcttaaaaaaaaacaa 20505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 309
Target Start/End: Complemental strand, 33676568 - 33676491
Alignment:
Q  232 ttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    |||||||||| |||| ||| ||||||||||||||||| |||   |||| |||| || |||| ||||| ||||||||||    
T  33676568 ttcagctgggtttttagcactccttgtgctgaaatcttcaggtgttcaataatatattccattttaacttcttaaaaa 33676491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 557
Target Start/End: Complemental strand, 9572755 - 9572707
Alignment:
Q  509 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||| ||||||||| ||| || |||||| ||||||||||||||||    
T  9572755 ataaaagcttatttatttgcataagctatttttcataagctcaatccaa 9572707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 552
Target Start/End: Complemental strand, 20169397 - 20169249
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||| |||||| |||| |  |||||| | ||| ||| ||||| ||| ||| |||  |||  ||||||||||||| || | || ||| | |||    
T  20169397 caaataaataagtttttatgttaatttttaagttctcattgacggaaattgtatatttataaactgttttttcataaactatatttaaaaacttataaat 20169298  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    || | |||||||| ||||||||| ||| || | |||| |||||||||||    
T  20169297 aatacataaaagcttatttatttgcataagctgtttttcataagctcaa 20169249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 28690162 - 28690114
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaa 427  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  28690162 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaa 28690114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 460
Target Start/End: Complemental strand, 42591543 - 42591459
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    ||||||||||||||||||||| ||| |  ||||||||||| |||||| |||| | ||||| ||| | ||||||||| | ||||||    
T  42591543 ggattgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctttcactaacgaaaagtgtatctt 42591459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 47413530 - 47413482
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaa 427  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  47413530 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaa 47413482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 377 - 545
Target Start/End: Original strand, 32901073 - 32901242
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| | |||||||||| | |||||||||||   ||||||| | | ||||||||||||||||||  ||||||||  | |    
T  32901073 ggattgagcttatgaaaaatagcttatgcaaataaatatgtttttatattaaaatataagttctcactaacgaaaattttatcttcataagttgttttct 32901172  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcata 545  Q
     ||||||||| |||||||  |||||||||| |||||||||| ||||||||| ||| |||| |||||||||    
T  32901173 tataaactatcttaacaaatttgtgaataataaataaaagcttatttatttacataagttgttttgcata 32901242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 43971775 - 43971922
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | |||||||||| | ||||| |||||   ||||||| | | ||||||||||||||||||  ||| ||||  | ||||    
T  43971775 ttgagcttatgaaaaataacttatgcaaataaatatgtttttaaattaaaatataagttctcactaacgaaaattttatcttcataaattgttttctcat 43971874  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  43971875 aaactattttaacaaacttgtgaataataaataaaagcttatttattt 43971922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 380 - 557
Target Start/End: Original strand, 3876191 - 3876369
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | |||||||||||| ||||||||||| |||||||||   | |||| |||| |||| |||  ||||||||  ||||||    
T  3876191 ttgagcttatgaaaaatagcttatgcaaataaataagtttttatattaattcataagttagaactaacaaaaactttaccttcttaagttgttttttcat 3876290  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    ||||||  ||||| || || ||||||| ||||||||||  |||||||| ||| || | ||||| |||||||||||||||    
T  3876291 aaactaccttaactagattatgaataataaataaaagctaatttatttacataagctgttttgtataagctcaatccaa 3876369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 377 - 552
Target Start/End: Original strand, 33946475 - 33946643
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| | ||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||   |||||||   |||    
T  33946475 ggattgagcttatgaaaaatagcttatgcaaataaatgagcttttatattaattcataagttctcattaacgaaaattttatctacataagttggttttt 33946574  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    |||||| ||  |||||         ||||| |||||||||| ||||||||| ||| || ||||||||||||||||||    
T  33946575 cataaattaccttaac--------taataataaataaaagcttatttatttgcataagctattttgcataagctcaa 33946643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 552
Target Start/End: Original strand, 34707645 - 34707814
Alignment:
Q  384 gcttatgaaaaatatcttta-caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaac 482  Q
    |||||||||||||| ||| | |||||||||||| |||||| |||| || |||||| |   ||||||||||| ||||||  | || |||  ||||||||||    
T  34707645 gcttatgaaaaataacttaagcaaataaataagtttttatgttaattcgtaagttctcgctaacgaaaattgtatcttcgttagctgttttttcataaac 34707744  T
Q  483 tattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||  ||||||||||| ||||||| | |||||||| ||| ||||| | | |||| ||||||||||||||||    
T  34707745 taccttaacaagcttatgaataatacataaaagcttatatatttacgtaagttgttttgcataagctcaa 34707814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 526
Target Start/End: Original strand, 43079864 - 43080009
Alignment:
Q  382 gagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 480  Q
    |||||||||||||||| ||| | ||||||||||||||||||  |||| ||||||||| | | | ||||||||| ||||||  |||| |||  ||||||||    
T  43079864 gagcttatgaaaaatagcttattcaaataaataagcttttaagttaattcataagttctcaatcacgaaaattgtatcttcataagctgttttttcataa 43079963  T
Q  481 actattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||  || |||||||| ||||||| | |||||||| |||||||||    
T  43079964 actaccttgacaagcttatgaataacacataaaagcttatttattt 43080009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 552
Target Start/End: Complemental strand, 51409550 - 51409378
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||| ||||||||| || ||| |||||||||||||| ||||||||||| |||||| |||| | ||  | ||||||||||||  ||||||||  ||||||    
T  51409550 ttgagattatgaaaagtagcttatacaaataaataag-ttttatattaattcataatttttcagtattggaaattttatcttcataagttgttttttcat 51409452  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||| ||  ||||||| |||||||||  ||||||||| ||| || |||||| |||||||||||    
T  51409451 aaactaccttgacaaactcatgaataataaataaaagattatttatttgcataagctattttccataagctcaa 51409378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 40240505 - 40240652
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||| | | | ||||||||||| ||||||  ||||||||  ||||||    
T  40240505 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatcttaattcataagctctcactaacgaaaattgtatcttcataagttgttttttcat 40240604  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||  |  ||| |||| ||||||| | |||||||| | |||||||    
T  40240605 aaactacctagacacgcttatgaataatacataaaagcttctttattt 40240652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 552
Target Start/End: Original strand, 22809121 - 22809295
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||| | | ||| | |||||||||||| |||||| |||| ||||||||| || |||||||||||| ||||||  ||||  ||  ||||||    
T  22809121 ttgagcttatgaaataaagcttgtgcaaataaataagtttttatgttaattcataagttcttcttaacgaaaattgtatcttcataagcagttttttcat 22809220  T
Q  479 aaactattttaacaagcttgtgaataaaaaat-aaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||||||| ||||||| | || |||||| ||||||||| ||| || | |||||||||| |||||    
T  22809221 aaactaccttgacaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgcataacctcaa 22809295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 552
Target Start/End: Original strand, 40581012 - 40581178
Alignment:
Q  388 atgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt-cataaactat 485  Q
    |||||||||||||| | |||||||||||| |||||| |||| ||||||||| | | ||||||||||| | ||||  || | |||  ||| |||||||||     
T  40581012 atgaaaaatatcttatgcaaataaataagattttatgttaattcataagttctcactaacgaaaattgtttcttcatacgctgtttttttcataaactac 40581111  T
Q  486 tttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
     || |||||||| | ||||| | |||||||| ||||||||| ||| |||| ||||||||||||||||    
T  40581112 cttgacaagcttattaataatacataaaagcttatttatttgcataagttgttttgcataagctcaa 40581178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 549
Target Start/End: Original strand, 53217998 - 53218138
Alignment:
Q  409 aaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaa 508  Q
    |||||||||||||| |||| | ||||||| | | ||||||||||| ||||||   |||||||  ||||||||||||  || |||||||| ||||||| |     
T  53217998 aaataagcttttattttaatttataagttctcactaacgaaaattgtatcttcaaaagttgttttttcataaactaccttgacaagcttatgaataatac 53218097  T
Q  509 ataaaagcgtatttattttcattagttattttgcataagct 549  Q
    |||||| | ||||||||  ||| |||| |||||||||||||    
T  53218098 ataaaatcttatttattcgcataagttgttttgcataagct 53218138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 461
Target Start/End: Complemental strand, 36266392 - 36266307
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatcttt 461  Q
    |||||||||||||||||||||  || | |||||||||||| |||||| |||| | ||||||||||||||||||||||  |||||||    
T  36266392 ggattgagcttatgaaaaataatttatgcaaataaataagtttttattttaatttataagtttttattaacgaaaatcatatcttt 36266307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 380 - 526
Target Start/End: Complemental strand, 585177 - 585031
Alignment:
Q  380 ttgagcttatgaaaaatatctttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 479  Q
    ||||||||||||||||||  | | ||||| ||||||||| ||| |||| || ||||||   | ||||||||||| ||||||  ||||||||  |||||||    
T  585177 ttgagcttatgaaaaatagttattcaaatcaataagcttatatgttaattcttaagttcaaactaacgaaaattgtatcttcataagttgttttttcata 585078  T
Q  480 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    |||||  | || |||||| |||||||   |||||||| |||||||||    
T  585077 aactacctcaagaagcttttgaataatgcataaaagcttatttattt 585031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 453
Target Start/End: Complemental strand, 38524249 - 38524172
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    ||||||||||||||||||| | ||| | ||||||||||||||||||| |||| ||||||| | ||| |||||||||||    
T  38524249 ggattgagcttatgaaaaagagcttatgcaaataaataagcttttatgttaattcataagatcttactaacgaaaatt 38524172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 309
Target Start/End: Complemental strand, 50642457 - 50642380
Alignment:
Q  232 ttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    |||||||||||||| |||| ||||| |||||||||||||||  ||||| |||| |||| || ||||| ||||||||||    
T  50642457 ttcagctggggtttcggcactccttatgctgaaatctccaggttttcagtaatataattcattttaacttcttaaaaa 50642380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 441 - 552
Target Start/End: Complemental strand, 29270457 - 29270346
Alignment:
Q  441 attaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttatttt 540  Q
    ||||||||||||| ||||||  |||| |||  ||||||||| ||| || | |||||| ||||||| | |||||||| ||||||||   || |||| ||||    
T  29270457 attaacgaaaattgtatcttcataagctgttttttcataaattatcttgaaaagcttatgaataatacataaaagcttatttattcctataagttgtttt 29270358  T
Q  541 gcataagctcaa 552  Q
    ||||||||||||    
T  29270357 gcataagctcaa 29270346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 460
Target Start/End: Complemental strand, 25341429 - 25341347
Alignment:
Q  379 attgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    ||||||||||||||||| | ||| |  ||||||||||| ||||||||||| ||| |||||||   ||||||||||||||||||    
T  25341429 attgagcttatgaaaaagagcttatgtaaataaataagtttttatattaattcacaagttttccctaacgaaaattttatctt 25341347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 526
Target Start/End: Original strand, 42956132 - 42956254
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||| |||||| |||| | ||||||| | | ||||||||||| ||||||| |||| |||  | |||||||||| ||  ||||| || |||||    
T  42956132 caaataaataagtttttatgttaatttataagttctcactaacgaaaattgtatctttataagctgttttatcataaactacttcgacaagtttatgaat 42956231  T
Q  504 aaaaaataaaagcgtatttattt 526  Q
    || | |||||| | |||||||||    
T  42956232 aatacataaaaacttatttattt 42956254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 526
Target Start/End: Original strand, 45331248 - 45331370
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||| ||||||| |||| ||||| ||| ||  || |||||||| ||||||  |||| |||  ||||||||||| | ||||||||||| || ||    
T  45331248 caaataaataaacttttatgttaattcatatgttcttgctagcgaaaattgtatcttcataagatgttttttcataaactgtcttaacaagcttatgcat 45331347  T
Q  504 aaaaaataaaagcgtatttattt 526  Q
    || | |||||||  |||||||||    
T  45331348 aatacataaaaggttatttattt 45331370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 441
Target Start/End: Complemental strand, 4974472 - 4974407
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagttttta 441  Q
    ||||||||||||||||||| | ||| | ||||||||||||||||||| |||| ||||||| |||||    
T  4974472 ggattgagcttatgaaaaagagcttatgcaaataaataagcttttatgttaattcataagatttta 4974407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 473 - 550
Target Start/End: Complemental strand, 10448838 - 10448761
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 550  Q
    ||||||||||||  ||||||||||| | ||||| | ||||| || ||||||||| ||| |||| ||||||||||||||    
T  10448838 tttcataaactacattaacaagcttataaataatacataaaggcatatttatttgcataagttgttttgcataagctc 10448761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 17752059 - 17752140
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  |||||||||| ||||||| |||| | ||||||| ||| ||||||||||| ||||||    
T  17752059 ttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatctt 17752140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 19053379 - 19053460
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| |  |||||||||| ||||||| |||| | ||||||| ||| ||||||||||| ||||||    
T  19053379 ttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatctt 19053460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 20174868 - 20174973
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||| |||||||||| | ||| | |||||||||||||||||||  ||| ||||||| | ||| ||||||||||| ||| ||  ||||||||  ||||||    
T  20174868 ttgaggttatgaaaaagagcttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcataagttgttttttcat 20174967  T
Q  479 aaacta 484  Q
    ||||||    
T  20174968 aaacta 20174973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 453
Target Start/End: Complemental strand, 43376856 - 43376779
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    ||||||||||||||||||| | ||| | ||| |||||||| ||||||||||| ||||||||||| |||  ||||||||    
T  43376856 ggattgagcttatgaaaaagagcttatgcaactaaataagtttttatattaattcataagttttcatttgcgaaaatt 43376779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 27769782 - 27769736
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaa 450  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  27769782 caaataaataagcttttatgttaatttataagttttcattaacgaaa 27769736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 48597794 - 48597900
Alignment:
Q  380 ttgagcttatgaaaaata-tctttacaaataaataagcttttatattaactca-taagtttttattaacgaaaattttatctttctaagttgtactttca 477  Q
    ||||||||| |||||||| | ||| ||||||||||||||||||| |||| ||| |||||| | | | ||||||||| ||||||  ||||||||  |||||    
T  48597794 ttgagcttacgaaaaatagtgtttgcaaataaataagcttttatgttaattcattaagttctcactgacgaaaattgtatcttcataagttgttttttca 48597893  T
Q  478 taaacta 484  Q
    || ||||    
T  48597894 tacacta 48597900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 497
Target Start/End: Original strand, 53787705 - 53787798
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagctt 497  Q
    |||||||||||| |||||| |||| ||||||||| | | |||| |||||| ||||||| |||  |||  |||| |||||||| |||| ||||||    
T  53787705 caaataaataagtttttatcttaattcataagttctcaataacaaaaattatatctttataaactgttttttcgtaaactatattaaaaagctt 53787798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 414 - 522
Target Start/End: Original strand, 3870189 - 3870297
Alignment:
Q  414 agcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaa 513  Q
    ||||||||| |||| ||||||||| | ||||| ||||| | |||| |  || |||||  ||||||||||||  || |||||||| |||| |||| |||||    
T  3870189 agcttttatgttaattcataagttctcattaatgaaaagtgtatcatcatatgttgttttttcataaactaccttgacaagcttatgaacaaaacataaa 3870288  T
Q  514 agcgtattt 522  Q
    ||| |||||    
T  3870289 agcttattt 3870297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 31787680 - 31787608
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaa 451  Q
    ||||||||||||||||||  || | ||||||||||| | |||||||||| ||||||||| |  ||||||||||    
T  31787680 ttgagcttatgaaaaatagtttatgcaaataaataaacgtttatattaattcataagttctctttaacgaaaa 31787608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 52895333 - 52895407
Alignment:
Q  380 ttgagcttatgaaaaatatcttta--caaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    ||||||||||||||||| | ||||  ||||||||||||||||||| |||| |||||| || | | |||||||||||    
T  52895333 ttgagcttatgaaaaat-tgtttaggcaaataaataagcttttatgttaattcataaattctcactaacgaaaatt 52895407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 7e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 383 - 557
Target Start/End: Complemental strand, 6758783 - 6758607
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagctttt-atattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 480  Q
    ||||| ||||||||| ||| | ||||||||||||||||| ||||||| ||||||||| | | |||||||| || ||||||  ||||||    ||||||||    
T  6758783 agcttctgaaaaatagcttatgcaaataaataagctttttatattaattcataagttctcactaacgaaatttgtatcttgataagttaatttttcataa 6758684  T
Q  481 actattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    ||||  ||||||||||| || |||| ||| |||||| ||||||||| ||| |||| |||||||||||||||||||||    
T  6758683 actaccttaacaagcttatggataataaacaaaagcttatttatttgcataagttgttttgcataagctcaatccaa 6758607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 377 - 552
Target Start/End: Complemental strand, 23239408 - 23239232
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | | ||| |||| || |||| |  ||| |||   |||    
T  23239408 ggattgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaaggaaagttgtatcgtcataatttgcttttt 23239309  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
     |||||| |  ||||||||||| ||||||| |||||||||| |||||||||  || ||||||||| |||||||||||    
T  23239308 gataaaccacgttaacaagcttatgaataataaataaaagcttatttatttgtataagttatttttcataagctcaa 23239232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 554
Target Start/End: Original strand, 29623406 - 29623580
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||| |||||||||||| ||| | |||||||||||| ||| || |||| ||||||||| | | ||||||||| ||||| ||  ||||||||  ||||||    
T  29623406 ttgagtttatgaaaaatagcttatgcaaataaataagattt-atgttaattcataagttctcactaacgaaaactttattttcataagttgttttttcat 29623504  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatc 554  Q
    ||||||  ||||||| ||  | ||||| |||||||||  ||||||||| ||| |||| ||||||||||||||||||    
T  29623505 aaactacattaacaaactcataaataataaataaaaggttatttatttgcataagttgttttgcataagctcaatc 29623580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 535
Target Start/End: Original strand, 32675818 - 32675973
Alignment:
Q  381 tgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 479  Q
    ||||||||||||||||| ||| | |||||||||||| ||||||||||| ||||||||| | | ||| ||||||| ||||||  |||||| |  |||||||    
T  32675818 tgagcttatgaaaaataacttatgcaaataaataagtttttatattaattcataagttctcactaatgaaaattgtatcttcataagttattttttcata 32675917  T
Q  480 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagtt 535  Q
    ||| |  |||  |||||| ||||||| |||||||||| ||||||||| ||| ||||    
T  32675918 aacaaccttacgaagcttatgaataataaataaaagcttatttatttgcataagtt 32675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 557
Target Start/End: Original strand, 2040107 - 2040292
Alignment:
Q  378 gattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt- 475  Q
    ||||||||| |||||||||| ||| | |||||||||||| ||||||||||| | ||||||| | | ||| ||||||| || |||| ||| ||||  |||     
T  2040107 gattgagctcatgaaaaataacttatgcaaataaataagtttttatattaatttataagttctaactaatgaaaattgtaactttataaattgttttttt 2040206  T
Q  476 ----cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
        |||||| ||  ||||||| ||| ||||||| |||||||||| |||||||||  || |||| |||||||||||||||||||||    
T  2040207 tcttcataaattaccttaacaaacttatgaataataaataaaagcttatttatttatataagttgttttgcataagctcaatccaa 2040292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 552
Target Start/End: Original strand, 21891270 - 21891439
Alignment:
Q  384 gcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaac 482  Q
    |||||||||||||| ||| | | ||| ||||||||||||| |||| ||||||||| ||   |||||||||| ||||||  ||||||||  ||||||||||    
T  21891270 gcttatgaaaaatagcttatgcgaatgaataagcttttatgttaattcataagttcttgcgaacgaaaattctatcttcataagttgttatttcataaac 21891369  T
Q  483 tattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||  || |||||||| ||||||| | || ||| | ||||||||| ||| || |||| |||||||||||||    
T  21891370 tacattgacaagcttatgaataatatatcaaaacttatttatttgcataagctattctgcataagctcaa 21891439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 417 - 552
Target Start/End: Original strand, 3829885 - 3830020
Alignment:
Q  417 ttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagc 516  Q
    |||||| |||| ||||||||| |||||||| |||||||||||||  ||||||||  ||||||||||||   ||| ||  || ||||||| ||||||||||    
T  3829885 ttttatgttaattcataagttcttattaacaaaaattttatcttcataagttgttttttcataaactaccataaaaactttatgaataacaaataaaagc 3829984  T
Q  517 gtatttattttcattagttattttgcataagctcaa 552  Q
    |||||||||| ||| ||   |||| |||||||||||    
T  3829985 gtatttatttgcataagccgtttttcataagctcaa 3830020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 18972703 - 18972609
Alignment:
Q  215 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    |||||||||||| |||||||||||  |||||||||| |||||||||||||||||| || |||| | |||| ||||| | ||||| ||||||||||    
T  18972703 ttcttgtaattgtctctttcagctaaggttttggcactccttgtgctgaaatctcaaggcttttagtaatataatcaattttaacttcttaaaaa 18972609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 526
Target Start/End: Original strand, 2034159 - 2034304
Alignment:
Q  382 gagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 480  Q
    |||||||||| ||||| ||| | ||||||||||||||||||| || | ||||||||| ||| | ||||||||| ||||||  ||||||||  ||||||||    
T  2034159 gagcttatgataaatagcttatgcaaataaataagcttttatgttgaatcataagttattacttacgaaaattgtatcttggtaagttgttttttcataa 2034258  T
Q  481 actattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||  || |||| ||| | ||||| | |||||||| |||||||||    
T  2034259 actaccttgacaaacttataaataatacataaaagcttatttattt 2034304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 24393921 - 24393996
Alignment:
Q  215 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatc 290  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||| || |||| | |||| |||||    
T  24393921 ttcttgtaattgactctttcagctaaggttttggcactccttgtgctgaaatctcaaggcttttagtaatataatc 24393996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 552
Target Start/End: Complemental strand, 10874117 - 10873971
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||||||||||| |||| ||||||||||| |  ||| |||||| ||||||  |||| |||  | ||||||||||  ||||||||||| | |||    
T  10874117 caaataaataagcttttatgttaattcataagttttcaccaactaaaattgtatcttcataagctgttttctcataaactaccttaacaagcttattaat 10874018  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
      || |||||||| ||||||| | ||| || |||||||||||| |||||    
T  10874017 --aatataaaagcttatttatatgcataagctattttgcataatctcaa 10873971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 12912328 - 12912255
Alignment:
Q  224 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 297  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  12912328 ttgactctttcatctggggttttgacactccttgtgctgaaatctccagacttttagtaatataatccatttta 12912255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 553
Target Start/End: Complemental strand, 2255866 - 2255718
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 504  Q
    |||||||||||||||||| |||| ||||| ||| | | || | |||||| ||||||  |||| |||  ||||||||| ||  ||||||||||| |||||     
T  2255866 aaataaataagcttttatgttaattcatatgttctcactaccaaaaattgtatcttcataagctgttttttcataaattaccttaacaagcttatgaatc 2255767  T
Q  505 aaaaataaaagcgtatttattttcattagttattttgcataagctcaat 553  Q
    | | ||||||||  |||||||| ||| |||  |||||||||||||||||    
T  2255766 atacataaaagctcatttatttgcataagtcgttttgcataagctcaat 2255718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 484
Target Start/End: Original strand, 10184255 - 10184363
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||| |||| | ||||| | ||| ||||||||||| | ||||  ||| ||||  |||    
T  10184255 ggattgagcttatgaaaaatagcttatataaataaataagcttttattttaatttataagctcttactaacgaaaattgtttcttcataaattgtttttt 10184354  T
Q  476 cataaacta 484  Q
    |||||||||    
T  10184355 cataaacta 10184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 165531 - 165610
Alignment:
Q  224 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttct 303  Q
    |||||||||||||||||||||||| || | |||||||||||||||| || |||| | |||| ||||||| |||| |||||    
T  165531 ttgactctttcagctggggttttgacacttcttgtgctgaaatctcaagacttttaataatataatccattttagtttct 165610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 6752972 - 6752915
Alignment:
Q  378 gattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataa 434  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||    
T  6752972 gattgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataa 6752915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 526
Target Start/End: Original strand, 2027107 - 2027251
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | |||||| |||| ||||||| |||| ||||||||| ||| |||| ||| || ||||||  |||| |||  |||||||||    
T  2027107 agcttatgaaaaatagcttatgcaaatagataaacttttatgttaattcataagttcttactaacaaaagttgtatcttcataagctgttttttcataaa 2027206  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    || | || |||| ||| |||||||   |||||||| |||||||||    
T  2027207 ctgtcttgacaaacttctgaataatgcataaaagcttatttattt 2027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 7576812 - 7576915
Alignment:
Q  402 tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtga 501  Q
    |||||||||||||| |||||| |||| | ||||||| |||| |||||||||| ||||||  |||  |||  ||| ||||| ||| ||||||||||| |||    
T  7576812 tacaaataaataagtttttatgttaattaataagttcttatcaacgaaaattatatcttcataaactgtttttttataaattatgttaacaagcttatga 7576911  T
Q  502 ataa 505  Q
    ||||    
T  7576912 ataa 7576915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 10755211 - 10755285
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    |||||||| |||||||||  || | ||||||||||||||||||| |||| ||||||||| ||| |||||||||||    
T  10755211 ttgagcttctgaaaaatagtttatgcaaataaataagcttttatgttaattcataagttcttactaacgaaaatt 10755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 9764319 - 9764400
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||| |||||||||||||  || | ||||||||||||||||||| |||| | |||||| || ||||||||||||| ||||||    
T  9764319 ttgaacttatgaaaaataatttatgcaaataaataagcttttatgttaatttataagtgttcattaacgaaaattgtatctt 9764400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 24625915 - 24625862
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||||||||  ||||||||||| ||||||| | ||||||||||||||||||    
T  24625915 tttcataaactaccttaacaagcttatgaataatacataaaagcgtatttattt 24625862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 453
Target Start/End: Original strand, 10730142 - 10730210
Alignment:
Q  386 ttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 453  Q
    |||||||||||  ||| |||||||||||||| |||||| |||| ||||||||| |||||||| ||||||    
T  10730142 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataagttcttattaacaaaaatt 10730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 550
Target Start/End: Complemental strand, 6632733 - 6632646
Alignment:
Q  463 taagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 550  Q
    ||||||||  ||||||||||||  |||||||| || | ||||| | |||||||| ||||||||| ||| |||| ||||| ||||||||    
T  6632733 taagttgttttttcataaactacattaacaagtttataaataatacataaaagcatatttatttgcataagttgttttgaataagctc 6632646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 23239232 - 23239275
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttat 422  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  23239232 ttgagcttatgaaaaataacttatacaaataaataagcttttat 23239275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 35071359 - 35071414
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 437  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| |||||||||    
T  35071359 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagtt 35071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 552
Target Start/End: Complemental strand, 10687443 - 10687292
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||||||||||| | |  ||||||||| |   ||||||||||| |||||   ||||||||  || |||||||||  |||| | |||| |||||    
T  10687443 caaataaataagcttttatgtcagttcataagttctcgctaacgaaaattgtatctccataagttgtttttacataaactaccttaataggcttatgaat 10687344  T
Q  504 aaaaa---ataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    |||||   || ||||| ||||||||| ||| || | ||||| ||||||||||    
T  10687343 aaaaatacatcaaagcttatttatttgcataagctgttttgaataagctcaa 10687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 557
Target Start/End: Original strand, 23239362 - 23239410
Alignment:
Q  509 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
    |||||||| ||||||||| ||| || |||||| ||||||||||||||||    
T  23239362 ataaaagcttatttatttgcataagctatttttcataagctcaatccaa 23239410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 19021396 - 19021494
Alignment:
Q  211 ggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||| | ||||||||||||  |||||| |||||||||||| |||| |||||||||||    
T  19021396 ggcactcttgtaattgactcttttagctggggttttggcactccttatactgaaatctccaagctttcaataatttaatccattttagtttcttaaaaa 19021494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 388 - 526
Target Start/End: Original strand, 13625456 - 13625596
Alignment:
Q  388 atgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactt-tcataaactat 485  Q
    |||||||||| ||| | ||||||||||| |||||||||||| | ||||||||| | ||||||||||||||||||| |||| |||  || ||||||||||     
T  13625456 atgaaaaatagcttatgcaaataaataaacttttatattaatttataagttttcactaacgaaaattttatctttataagctgtttttatcataaactac 13625555  T
Q  486 tttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
     | ||||||||| ||||||| |||||||||| |||||||||    
T  13625556 ctcaacaagcttatgaataataaataaaagcatatttattt 13625596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 408 - 548
Target Start/End: Complemental strand, 42852150 - 42852011
Alignment:
Q  408 taaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaa 507  Q
    ||||||||||||||| |||| ||||||||| | | ||||||||||| ||| ||| ||||||||  ||||||||||||| || |||||||| ||||||| |    
T  42852150 taaataagcttttatgttaattcataagttctcactaacgaaaattgtat-tttataagttgttttttcataaactatcttgacaagcttatgaataata 42852052  T
Q  508 aataaaagcgtatttattttcattagttattttgcataagc 548  Q
     |||||||| |||||||||  || || | ||||||||||||    
T  42852051 cataaaagcttatttatttgaataagctgttttgcataagc 42852011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 526
Target Start/End: Original strand, 40152804 - 40152951
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||| ||||||||||| ||||| | ||||||||||| |||||||||||| ||||||||| | |  |||||||||||||||||  ||| ||||  ||||||    
T  40152804 ttgaacttatgaaaaacatcttatgcaaataaataatcttttatattaattcataagttctcaagaacgaaaattttatcttcataaattgttttttcat 40152903  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||||||| |||||||  || || |||| |||||||| | |||||||||    
T  40152904 aaactatcttaacaaatttatggataataaataaaaacttatttattt 40152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 39143317 - 39143215
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    |||||||| |||||||||||||||||| ||||  | |||||||| ||||| ||||||||||||||| |||||  || ||||||||| |||| ||||||||    
T  39143317 ttttggcactcttgtaattgactcttttagctatgattttggcactccttatgctgaaatctccaggctttcggtattttaatccattttagtttcttaa 39143218  T
Q  307 aaa 309  Q
    |||    
T  39143217 aaa 39143215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 22639563 - 22639664
Alignment:
Q  208 tttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaa 307  Q
    ||||||| |||||||| ||||||||| | |||||||||||||| |||||||| |||||||||||  |||||| || ||||||||| |||| |||||| ||    
T  22639563 tttggcactcttgtaactgactcttttaactggggttttggcactccttgtgatgaaatctccaaactttcagtattttaatccattttagtttcttcaa 22639662  T
Q  308 aa 309  Q
    ||    
T  22639663 aa 22639664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 404 - 552
Target Start/End: Original strand, 7364262 - 7364410
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    |||||||||||||||||||||||| ||||||||| | | |||| || ||| ||||||  ||||||||   || ||||||||  ||||||||||| |||||    
T  7364262 caaataaataagcttttatattaattcataagttctcactaacaaatattgtatcttcataagttgtttgttgataaactaccttaacaagcttatgaat 7364361  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    || ||||| |||| ||||| ||| ||| || | |||| |||||||||||    
T  7364362 aataaatagaagcttatttttttgcatcagctgttttacataagctcaa 7364410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 383 - 526
Target Start/End: Complemental strand, 28625635 - 28625491
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| ||||| ||| | | ||||||||||| ||||||  |||| |||  |||||||||    
T  28625635 agcttatgaaaaataacttatgcaaataaataagcttttatgttaattcataggttctcactaacgaaaattgtatcttcataagctgttttttcataaa 28625536  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    |||  || |||||||| ||||||| |  ||||||| |||||||||    
T  28625535 ctaccttgacaagcttatgaataatacttaaaagcttatttattt 28625491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 526
Target Start/End: Complemental strand, 24030369 - 24030226
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||| ||||||| ||| | ||||||||||||||||||| |||| ||||||||| | | ||||||||||| |||| |   ||| |||  |||||||||    
T  24030369 agcttattaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgtatcctcgcaag-tgttttttcataaa 24030271  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||| ||| |||||||| ||||||| | |||||||| |||||||||    
T  24030270 ctactttgacaagcttatgaataatacataaaagcttatttattt 24030226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 6537080 - 6537181
Alignment:
Q  207 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 306  Q
    ||||| |||| |||||||||||||||| ||||  | |||||||| ||||| |||||||||||||||  ||||| |||||| ||||| |||| ||||||||    
T  6537080 ttttgacatttttgtaattgactcttt-agcttagattttggcactccttatgctgaaatctccagagtttcagtaatttcatccattttagtttcttaa 6537178  T
Q  307 aaa 309  Q
    |||    
T  6537179 aaa 6537181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 546
Target Start/End: Original strand, 13060555 - 13060697
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||||||||||| |||| ||||||||| | | ||||||||||  || |||  |||| |||  ||||||||||||  || |||||||| ||||     
T  13060555 caaataaataagcttttatgttaattcataagttctcactaacgaaaatggtaacttcataagctgttttttcataaactaccttgacaagcttatgaac 13060654  T
Q  504 aaaaaataaaagcgtatttattttcattagttattttgcataa 546  Q
    || | |||||||| ||||||||| ||| |||| |||| |||||    
T  13060655 aatacataaaagcttatttatttgcataagttcttttacataa 13060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 497
Target Start/End: Complemental strand, 35537002 - 35536885
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||| |||||||||||| ||| | |||||||||||||||||||||||  ||||||||| | | ||||||||||| ||||||  |||| |||  ||||||    
T  35537002 ttgagattatgaaaaatagcttatgcaaataaataagcttttatattat-tcataagttctcagtaacgaaaattgtatcttcataagctgttttttcat 35536904  T
Q  479 aaactattttaacaagctt 497  Q
    ||||||| || ||||||||    
T  35536903 aaactatcttgacaagctt 35536885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 552
Target Start/End: Original strand, 29922117 - 29922290
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||| |||||||||||| ||| | |||||||||||||||||||||||| ||||||| | | | |||  |||||| ||| |   |||| |||  ||||||    
T  29922117 ttgagtttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagctctcactaaaaaaaattgtatatgcataagctgtgttttcat 29922216  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||  || |||||||| ||||||| | |||||| | ||||||||| ||| |  | ||||||||||||||||    
T  29922217 aaactaccttgacaagcttatgaataatacataaaaacttatttatttgcataaactgttttgcataagctcaa 29922290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 40697164 - 40697083
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 460  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||| |  ||| |||||| ||||||    
T  40697164 ttgagcttatgaaaaatagcttatacaaataaataagcttttatgttaattcataagttttcaggaacaaaaattgtatctt 40697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 525
Target Start/End: Original strand, 11912032 - 11912176
Alignment:
Q  382 gagcttatgaaaaatatcttta-caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 480  Q
    |||||||||||||||||||| | |||||||||||||||| || |||| ||||||||| | | |||| |||||| ||||||  |||| | |  ||||| ||    
T  11912032 gagcttatgaaaaatatcttgagcaaataaataagctttcatgttaattcataagttctcactaacaaaaattgtatcttcataagctcttttttcacaa 11912131  T
Q  481 actattttaacaagcttgtgaataaaaaataaaagcgtatttatt 525  Q
    |||| ||| ||||| || |||| || | |||||||| ||||||||    
T  11912132 actactttgacaagattatgaacaatacataaaagcttatttatt 11912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 408 - 550
Target Start/End: Complemental strand, 43319132 - 43318990
Alignment:
Q  408 taaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaa 507  Q
    |||||||| |||||| |||| ||||||||| | | ||||||||||| || |||  |||  |||  ||||||||||||  ||||||||||| | ||||| |    
T  43319132 taaataagtttttatcttaattcataagttctcactaacgaaaattataccttcataaactgttttttcataaactacattaacaagcttataaataata 43319033  T
Q  508 aataaaagcgtatttattttcattagttattttgcataagctc 550  Q
     |||||  | ||||||||| ||| |||| ||||||||||||||    
T  43319032 cataaagacatatttatttgcataagttgttttgcataagctc 43318990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 552
Target Start/End: Original strand, 2878631 - 2878777
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 504  Q
    |||||||||||||||||| |||| | | ||||||| | |||| |||||| |||| ||||||  |||  |||||||||| |  || |||| ||| ||||||    
T  2878631 aaataaataagcttttatgttaatttaaaagttttcactaacaaaaattgtatc-ttctaaactgttgtttcataaaccacattgacaaacttatgaata 2878729  T
Q  505 aaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    | | |||||||| ||||||||| ||| || | ||| ||||||||||||    
T  2878730 atagataaaagcttatttatttgcataagctgtttagcataagctcaa 2878777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 535
Target Start/End: Complemental strand, 17657375 - 17657244
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 503  Q
    ||||||||||| ||||||| |||| ||||||||| | | ||||||||||  ||||||  |||| |||  ||||||||||||   |  ||||||| |||||    
T  17657375 caaataaataaccttttatgttaattcataagttctcactaacgaaaatcgtatcttcataagatgttttttcataaactacaatggcaagcttatgaat 17657276  T
Q  504 aaaaaataaaagcgtatttattttcattagtt 535  Q
    || | |||||||| ||||||||| ||| ||||    
T  17657275 aatacataaaagcttatttatttgcataagtt 17657244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 525
Target Start/End: Complemental strand, 1868940 - 1868858
Alignment:
Q  443 taacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttatt 525  Q
    ||||||||||| ||||||  |||||||   ||||||||||||  || |||||||||||||||| | |||||||| ||||||||    
T  1868940 taacgaaaattgtatcttcataagttgatttttcataaactaccttgacaagcttgtgaataatacataaaagcttatttatt 1868858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 552
Target Start/End: Original strand, 22201959 - 22202037
Alignment:
Q  474 ttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    |||||||||||  || |||||||| ||||||| | |||||||| ||||||||| ||| || | ||||||||||||||||    
T  22201959 ttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttacataagctgttttgcataagctcaa 22202037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 461
Target Start/End: Original strand, 11163231 - 11163292
Alignment:
Q  400 tttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatcttt 461  Q
    ||||||||||||||||||||||| |||| |||||||||   | ||||||||||| |||||||    
T  11163231 tttacaaataaataagcttttatgttaattcataagttcgcactaacgaaaattgtatcttt 11163292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 552
Target Start/End: Complemental strand, 17128348 - 17128263
Alignment:
Q  467 ttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||| |||||||||||| ||| | ||| || ||||||| | |||||||| ||||||||| ||| || | ||||||||||||||||    
T  17128348 ttgtattttcataaactactttgataagtttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaa 17128263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 497
Target Start/End: Complemental strand, 28357274 - 28357181
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagctt 497  Q
    ||||||||||||||||||| |||| | |||||||||  |||||||||||| ||||||  |||  |||  ||||||||||||  || ||||||||    
T  28357274 caaataaataagcttttatgttaatttataagttttcgttaacgaaaattgtatcttcataacctgttttttcataaactacattgacaagctt 28357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 926759 - 926819
Alignment:
Q  238 tggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaa 298  Q
    ||||||||||||| ||||||||||||||||||||   ||||| |||| ||||||| |||||    
T  926759 tggggttttggcactccttgtgctgaaatctccaaattttcagtaatataatccattttaa 926819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 552
Target Start/End: Original strand, 1371921 - 1372094
Alignment:
Q  377 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 475  Q
    ||||||||||||||||||||| ||| |||||||||||||| |||||| |||| | ||||| | | |||||||||||||  |||||  | |  |||  |||    
T  1371921 ggattgagcttatgaaaaataacttatacaaataaataag-ttttatgttaatttataag-tctcattaacgaaaattaaatcttcatcaactgt-tttt 1372017  T
Q  476 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
    ||||||| |  || |||||||| | ||||| | ||||||| |||||||||| ||| |  | ||||||||||||||||    
T  1372018 cataaaccacatttacaagcttataaataatacataaaagtgtatttatttacataaactgttttgcataagctcaa 1372094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 553
Target Start/End: Original strand, 10537241 - 10537321
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaat 553  Q
    ||||||||||||| || |||||||| | ||||| | |||||||| ||||||||| ||| || | |||| ||||||||||||    
T  10537241 tttcataaactatcttgacaagcttataaataatacataaaagcttatttatttgcataagctgttttacataagctcaat 10537321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 505
Target Start/End: Complemental strand, 41419633 - 41419533
Alignment:
Q  405 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 504  Q
    ||||||||||| |||||| |||| | ||||||| | | ||||||||||| ||||||  |||| |||  ||||||||||||  || |||||||| ||||||    
T  41419633 aaataaataagtttttatgttaattgataagttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaata 41419534  T
Q  505 a 505  Q
    |    
T  41419533 a 41419533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 434
Target Start/End: Complemental strand, 6125444 - 6125389
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataa 434  Q
    |||| ||||||||||||| ||| | |||||||||||||||||||||||| ||||||    
T  6125444 ttgaacttatgaaaaatagcttatgcaaataaataagcttttatattaattcataa 6125389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 526
Target Start/End: Complemental strand, 6144896 - 6144749
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||||||  || | |||||||| ||||||||||||||| ||||||||| |   |||| |||||| ||| ||  |||| | |  ||||||    
T  6144896 ttgagcttatgaaaaatagtttatgcaaataaacaagcttttatattaattcataagttctcgctaacaaaaattgtatattcataagctattttttcat 6144797  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 526  Q
    ||| ||  || |||||||| ||| ||| | |||||||| |||||||||    
T  6144796 aaaataccttgacaagcttatgagtaatatataaaagcttatttattt 6144749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 548
Target Start/End: Complemental strand, 11991369 - 11991294
Alignment:
Q  473 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagc 548  Q
    |||||||||| || || |||||||| | ||||| | |||||||| ||||||||| ||| |||| ||||||||||||    
T  11991369 tttcataaaccatatttacaagcttataaataatacataaaagcttatttatttacataagttgttttgcataagc 11991294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 484
Target Start/End: Complemental strand, 38498699 - 38498623
Alignment:
Q  406 aataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaacta 484  Q
    ||||||||||||||||| |||| | ||||||||| | |||| |||||| ||||||| ||| ||||  ||||||||||||    
T  38498699 aataaataagcttttattttaatttataagttttcactaacaaaaattatatctttataaattgt--tttcataaacta 38498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 505
Target Start/End: Original strand, 40452405 - 40452532
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacg-aaaattttatctttctaagttgtactttca 477  Q
    |||||||||||||||||| ||| | |||||||||||||| |||| || | ||||||||| | | ||||| |||||| ||||||  |||| |||   ||||    
T  40452405 ttgagcttatgaaaaatagcttatgcaaataaataagctattatgtttattcataagttctcactaacgaaaaattatatcttcataagctgtttcttca 40452504  T
Q  478 taaactattttaacaagcttgtgaataa 505  Q
    |||||||  || |||||||| |||||||    
T  40452505 taaactaccttgacaagcttatgaataa 40452532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 522
Target Start/End: Original strand, 41059717 - 41059860
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    |||||||||||||||| |  || | ||||||||||||||||||| |||| ||||||||| | | |||||||||||  |||||  |||| ||   ||||||    
T  41059717 ttgagcttatgaaaaacagtttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgaatcttcataaggtgatttttcat 41059816  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtattt 522  Q
    |||| |  || | |||||| ||||||| | |||||||| |||||    
T  41059817 aaacaaccttgataagcttatgaataatacataaaagcttattt 41059860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 514
Target Start/End: Original strand, 23087736 - 23087842
Alignment:
Q  408 taaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaa 507  Q
    ||||| || ||||||||||| ||||||||| | | |||| |||||| || |||  | ||||||  ||||||||||||| ||||||||||| | ||||| |    
T  23087736 taaattagtttttatattaattcataagttctcactaacaaaaattgtaccttcatgagttgttttttcataaactatattaacaagcttataaataata 23087835  T
Q  508 aataaaa 514  Q
     ||||||    
T  23087836 cataaaa 23087842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 484
Target Start/End: Complemental strand, 27806048 - 27805968
Alignment:
Q  404 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaacta 484  Q
    ||||||||||| ||||||| |||| | ||||||||| | |||| |||||| ||||||| |||  |||  ||||||||||||    
T  27806048 caaataaataaacttttatgttaatttataagttttcactaacaaaaattgtatctttataacatgttttttcataaacta 27805968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 41125832 - 41125748
Alignment:
Q  380 ttgagcttatgaaaaatatcttta-caaataaataagcttttatattaactcataagtttttattaacgaaaattt-tatctttc 462  Q
    ||||| |||||||||||| ||||  |||||| |||||||||||| |||| ||||||||| | | |||| ||||||| ||||||||    
T  41125832 ttgagtttatgaaaaatagcttttgcaaatatataagcttttatgttaattcataagttctcactaactaaaatttgtatctttc 41125748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 42558645 - 42558693
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaa 427  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  42558645 ttgagcttatgaaaaatagcttatgcaaataaataagcttttattttaa 42558693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 94900 - 94973
Alignment:
Q  224 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 297  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  94900 ttgactctttcagctgggattttggcactccttgtgctgaaatctccaggcttttaataatataatccatttta 94973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 383 - 557
Target Start/End: Complemental strand, 1213 - 1038
Alignment:
Q  383 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 481  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||   ||||||| | | ||| |||| || ||||||  |||||| |  || ||||||    
T  1213 agcttatgaaaaataacttatgcaaataaataagcttttatattaaagtataagttctcactaatgaaatttgtatcttcataagttatttttccataaa 1114  T
Q  482 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 557  Q
     ||  ||||||| ||| || |||| |||||||||| ||||||||| ||| |||| ||||| ||||||  |||||||    
T  1113 ttaccttaacaatcttatggataataaataaaagcttatttatttgcataagttgttttgtataagcctaatccaa 1038  T

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Target: scaffold0300 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 9581 - 9682
Alignment:
Q  208 tttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaa 307  Q
    ||||||| |||||||| ||||||||| ||||||| ||||| || | ||||||||||||||| ||| |||| | || ||||||||| |||| |||||| ||    
T  9581 tttggcactcttgtaactgactcttttagctgggattttgacacttcttgtgctgaaatcttcaggcttttagtattttaatccattttagtttcttcaa 9680  T
Q  308 aa 309  Q
    ||    
T  9681 aa 9682  T

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Target: scaffold0037 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 997 - 1082
Alignment:
Q  224 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||| ||||   |||| ||||||| ||||  ||||||||||    
T  997 ttgactctttcagctggggttttgtcactccttatgctgaaatctccagactttttgtaatataatccattttagcttcttaaaaa 1082  T

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Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 549
Target Start/End: Complemental strand, 24905 - 24733
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||| || ||| | |||||||||||| |||||| |||| | ||||||| | | ||| ||| ||| ||||||  | || |||  ||||||    
T  24905 ttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcat 24806  T
Q  479 aaacta--ttttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 549  Q
    ||||||  |||| |||||||| ||||||| | |||||||| ||||||||| ||| || | |||||| ||||||    
T  24805 aaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataagctgttttgcttaagct 24733  T

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Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 552
Target Start/End: Original strand, 24317 - 24489
Alignment:
Q  380 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 478  Q
    ||||||||||||||| ||  || | |||||||||| ||||||||  ||| ||| ||||||||| ||||||||||| ||||||  ||||||||  ||| ||    
T  24317 ttgagcttatgaaaagtagtttatgcaaataaataggcttttatgataattcacaagtttttactaacgaaaattatatcttcgtaagttgttattttat 24416  T
Q  479 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 552  Q
     |||||  || |||||||| ||||||| | ||| |||| ||||||||| ||| || | ||||| | ||||||||    
T  24417 caactaccttgacaagcttatgaataatacatacaagc-tatttatttgcataagctgttttgtagaagctcaa 24489  T

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Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 23809 - 23899
Alignment:
Q  219 tgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 309  Q
    |||||||| |||||||| ||  |||||||||| |||||||||||||||||| || |||| | |||| ||||| | ||||  ||||||||||    
T  23809 tgtaattgtctctttcaactacggttttggcactccttgtgctgaaatctcaaggcttttagtaatataatcaattttagcttcttaaaaa 23899  T

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