View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14361_low_1 (Length: 693)

Name: NF14361_low_1
Description: NF14361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14361_low_1
NF14361_low_1
[»] chr8 (39 HSPs)
chr8 (12-686)||(45547587-45548270)
chr8 (316-539)||(45540318-45540534)
chr8 (459-539)||(45540695-45540776)
chr8 (515-662)||(32924167-32924313)
chr8 (490-636)||(32975698-32975845)
chr8 (490-636)||(34286492-34286638)
chr8 (317-419)||(24504057-24504159)
chr8 (490-625)||(38895681-38895817)
chr8 (318-419)||(8444258-8444356)
chr8 (490-636)||(24350447-24350594)
chr8 (487-660)||(14942411-14942585)
chr8 (496-593)||(25465781-25465878)
chr8 (334-428)||(13089752-13089850)
chr8 (490-662)||(32131425-32131598)
chr8 (327-419)||(10230099-10230191)
chr8 (327-419)||(24581444-24581536)
chr8 (490-636)||(41145324-41145473)
chr8 (514-625)||(14724918-14725029)
chr8 (490-659)||(16972284-16972455)
chr8 (515-570)||(25333655-25333710)
chr8 (493-636)||(28879069-28879210)
chr8 (487-603)||(2563402-2563519)
chr8 (498-562)||(24087256-24087321)
chr8 (490-613)||(10298855-10298978)
chr8 (583-662)||(26046978-26047057)
chr8 (487-593)||(30974043-30974150)
chr8 (487-636)||(2669659-2669809)
chr8 (493-570)||(9131059-9131137)
chr8 (490-547)||(10213795-10213853)
chr8 (616-662)||(11988308-11988354)
chr8 (616-661)||(29713289-29713334)
chr8 (490-570)||(35055499-35055579)
chr8 (514-603)||(36907597-36907686)
chr8 (490-570)||(37410841-37410922)
chr8 (490-570)||(42102183-42102264)
chr8 (619-667)||(2669763-2669811)
chr8 (490-547)||(8752906-8752965)
chr8 (527-607)||(9782223-9782303)
chr8 (487-658)||(19925546-19925718)
[»] chr2 (32 HSPs)
chr2 (487-662)||(21788442-21788618)
chr2 (316-419)||(2702253-2702356)
chr2 (317-419)||(37647968-37648070)
chr2 (332-419)||(27271658-27271745)
chr2 (317-419)||(12410790-12410892)
chr2 (317-419)||(12422850-12422952)
chr2 (317-419)||(6764423-6764525)
chr2 (493-594)||(8832510-8832612)
chr2 (325-419)||(11031809-11031903)
chr2 (490-645)||(4004821-4004977)
chr2 (327-419)||(34394480-34394572)
chr2 (493-662)||(4026911-4027080)
chr2 (573-667)||(34913402-34913496)
chr2 (490-658)||(15155802-15155971)
chr2 (490-662)||(33321240-33321413)
chr2 (514-615)||(42064883-42064984)
chr2 (490-624)||(36501443-36501578)
chr2 (493-570)||(38216096-38216174)
chr2 (487-634)||(11776997-11777145)
chr2 (490-636)||(25836641-25836787)
chr2 (514-659)||(29774733-29774878)
chr2 (490-662)||(37409628-37409801)
chr2 (619-667)||(21788572-21788620)
chr2 (512-580)||(35731203-35731271)
chr2 (489-660)||(38471718-38471890)
chr2 (583-662)||(755764-755843)
chr2 (490-592)||(30382197-30382300)
chr2 (514-580)||(7480852-7480918)
chr2 (487-580)||(12950040-12950134)
chr2 (490-563)||(22898285-22898359)
chr2 (514-571)||(23956217-23956274)
chr2 (515-603)||(16108076-16108164)
[»] chr7 (33 HSPs)
chr7 (487-667)||(44613398-44613579)
chr7 (316-428)||(1032222-1032334)
chr7 (317-419)||(28782010-28782112)
chr7 (317-419)||(9948933-9949035)
chr7 (330-407)||(11621380-11621457)
chr7 (317-419)||(9942597-9942699)
chr7 (518-662)||(48021605-48021748)
chr7 (490-615)||(39279461-39279588)
chr7 (514-667)||(28759790-28759946)
chr7 (490-662)||(29390479-29390651)
chr7 (334-407)||(40871309-40871382)
chr7 (490-660)||(22032749-22032920)
chr7 (490-636)||(29378656-29378803)
chr7 (487-607)||(47654339-47654460)
chr7 (487-625)||(37465811-37465951)
chr7 (514-636)||(47648549-47648670)
chr7 (490-662)||(38372543-38372716)
chr7 (514-626)||(14691252-14691364)
chr7 (493-660)||(22575573-22575741)
chr7 (493-547)||(33204934-33204989)
chr7 (490-570)||(16932858-16932939)
chr7 (490-570)||(16938241-16938322)
chr7 (490-570)||(16958892-16958973)
chr7 (490-570)||(33288003-33288084)
chr7 (327-419)||(17193881-17193972)
chr7 (490-652)||(34922926-34923091)
chr7 (487-636)||(35809101-35809251)
chr7 (514-623)||(8180544-8180653)
chr7 (489-651)||(43391717-43391880)
chr7 (487-547)||(43818803-43818864)
chr7 (490-636)||(20888584-20888732)
chr7 (618-662)||(22515564-22515608)
chr7 (619-667)||(44613396-44613444)
[»] chr4 (47 HSPs)
chr4 (487-667)||(41228883-41229064)
chr4 (317-419)||(43499300-43499402)
chr4 (316-419)||(39059718-39059821)
chr4 (493-667)||(46704201-46704375)
chr4 (490-626)||(18630823-18630960)
chr4 (318-419)||(36651736-36651837)
chr4 (495-662)||(29877624-29877792)
chr4 (316-419)||(9896503-9896606)
chr4 (490-662)||(23297423-23297593)
chr4 (490-636)||(48591352-48591499)
chr4 (334-419)||(37870640-37870726)
chr4 (514-634)||(36298344-36298465)
chr4 (515-662)||(18424232-18424378)
chr4 (573-667)||(212960-213053)
chr4 (490-636)||(2547975-2548122)
chr4 (490-624)||(17222852-17222987)
chr4 (514-636)||(896981-897103)
chr4 (317-419)||(7743575-7743677)
chr4 (493-659)||(42611799-42611966)
chr4 (553-662)||(7206578-7206687)
chr4 (491-667)||(8057017-8057194)
chr4 (493-636)||(36740915-36741059)
chr4 (515-662)||(38345776-38345922)
chr4 (514-636)||(7148783-7148905)
chr4 (325-399)||(23106768-23106842)
chr4 (490-659)||(12495572-12495744)
chr4 (490-667)||(11298573-11298740)
chr4 (317-419)||(42718574-42718678)
chr4 (327-419)||(54898883-54898975)
chr4 (541-636)||(43983362-43983457)
chr4 (512-570)||(48721897-48721955)
chr4 (583-659)||(948060-948136)
chr4 (583-662)||(3564205-3564284)
chr4 (493-563)||(8130563-8130634)
chr4 (583-662)||(43699505-43699584)
chr4 (616-667)||(46175902-46175953)
chr4 (490-563)||(14987528-14987602)
chr4 (493-549)||(30956782-30956839)
chr4 (490-590)||(31022457-31022558)
chr4 (493-593)||(35405738-35405838)
chr4 (490-562)||(42617158-42617231)
chr4 (490-570)||(47202902-47202983)
chr4 (514-594)||(22397258-22397338)
chr4 (514-562)||(24031165-24031213)
chr4 (492-547)||(34526267-34526323)
chr4 (515-662)||(43415242-43415390)
chr4 (487-570)||(46175904-46175988)
[»] chr1 (50 HSPs)
chr1 (487-667)||(9572709-9572891)
chr1 (317-419)||(33766359-33766461)
chr1 (487-667)||(46689475-46689656)
chr1 (514-662)||(46473079-46473227)
chr1 (325-407)||(19227894-19227976)
chr1 (317-419)||(51534473-51534575)
chr1 (490-662)||(13038932-13039105)
chr1 (326-414)||(4532087-4532175)
chr1 (331-419)||(33936450-33936538)
chr1 (490-636)||(26988159-26988306)
chr1 (490-636)||(28122627-28122776)
chr1 (514-659)||(4068103-4068248)
chr1 (317-419)||(13182647-13182749)
chr1 (334-407)||(34549383-34549456)
chr1 (334-407)||(45432381-45432454)
chr1 (487-636)||(36422906-36423056)
chr1 (491-635)||(15515276-15515421)
chr1 (490-614)||(37712100-37712225)
chr1 (514-653)||(35282547-35282686)
chr1 (490-636)||(37329340-37329487)
chr1 (514-660)||(51162256-51162402)
chr1 (512-660)||(12256594-12256741)
chr1 (515-662)||(26946058-26946206)
chr1 (493-636)||(48819310-48819454)
chr1 (493-659)||(10365159-10365325)
chr1 (490-636)||(16888897-16889040)
chr1 (553-660)||(49971238-49971345)
chr1 (514-636)||(6337709-6337831)
chr1 (495-563)||(10849999-10850068)
chr1 (514-624)||(12828145-12828257)
chr1 (514-667)||(25485728-25485881)
chr1 (514-594)||(36259244-36259324)
chr1 (490-532)||(1565303-1565345)
chr1 (490-656)||(35897547-35897718)
chr1 (490-570)||(15791460-15791541)
chr1 (514-650)||(26542970-26543106)
chr1 (516-636)||(3069809-3069929)
chr1 (487-570)||(19395851-19395935)
chr1 (514-570)||(50919564-50919620)
chr1 (490-624)||(41196638-41196773)
chr1 (490-563)||(5347238-5347312)
chr1 (513-547)||(10082351-10082385)
chr1 (490-570)||(3115990-3116071)
chr1 (341-426)||(20505672-20505757)
chr1 (342-419)||(33676491-33676568)
chr1 (619-667)||(9572707-9572755)
chr1 (514-662)||(20169249-20169397)
chr1 (490-537)||(28690114-28690162)
chr1 (487-570)||(42591459-42591543)
chr1 (490-537)||(47413482-47413530)
[»] chr3 (31 HSPs)
chr3 (487-655)||(32901073-32901242)
chr3 (490-636)||(43971775-43971922)
chr3 (490-667)||(3876191-3876369)
chr3 (487-662)||(33946475-33946643)
chr3 (494-662)||(34707645-34707814)
chr3 (492-636)||(43079864-43080009)
chr3 (490-662)||(51409378-51409550)
chr3 (490-636)||(40240505-40240652)
chr3 (490-662)||(22809121-22809295)
chr3 (498-662)||(40581012-40581178)
chr3 (519-659)||(53217998-53218138)
chr3 (487-571)||(36266307-36266392)
chr3 (490-636)||(585031-585177)
chr3 (487-563)||(38524172-38524249)
chr3 (342-419)||(50642380-50642457)
chr3 (551-662)||(29270346-29270457)
chr3 (489-570)||(25341347-25341429)
chr3 (514-636)||(42956132-42956254)
chr3 (514-636)||(45331248-45331370)
chr3 (487-551)||(4974407-4974472)
chr3 (583-660)||(10448761-10448838)
chr3 (490-570)||(17752059-17752140)
chr3 (490-570)||(19053379-19053460)
chr3 (490-594)||(20174868-20174973)
chr3 (487-563)||(43376779-43376856)
chr3 (514-560)||(27769736-27769782)
chr3 (490-594)||(48597794-48597900)
chr3 (514-607)||(53787705-53787798)
chr3 (524-632)||(3870189-3870297)
chr3 (490-561)||(31787608-31787680)
chr3 (490-563)||(52895333-52895407)
[»] chr6 (27 HSPs)
chr6 (493-667)||(6758607-6758783)
chr6 (487-662)||(23239232-23239408)
chr6 (490-664)||(29623406-29623580)
chr6 (491-645)||(32675818-32675973)
chr6 (488-667)||(2040107-2040292)
chr6 (494-662)||(21891270-21891439)
chr6 (527-662)||(3829885-3830020)
chr6 (325-419)||(18972609-18972703)
chr6 (492-636)||(2034159-2034304)
chr6 (325-400)||(24393921-24393996)
chr6 (514-662)||(10873971-10874117)
chr6 (334-407)||(12912255-12912328)
chr6 (515-663)||(2255718-2255866)
chr6 (487-594)||(10184255-10184363)
chr6 (334-413)||(165531-165610)
chr6 (488-544)||(6752915-6752972)
chr6 (493-636)||(2027107-2027251)
chr6 (512-615)||(7576812-7576915)
chr6 (490-563)||(10755211-10755285)
chr6 (490-570)||(9764319-9764400)
chr6 (583-636)||(24625862-24625915)
chr6 (496-563)||(10730142-10730210)
chr6 (573-660)||(6632646-6632733)
chr6 (490-532)||(23239232-23239275)
chr6 (493-547)||(35071359-35071414)
chr6 (514-662)||(10687292-10687443)
chr6 (619-667)||(23239362-23239410)
[»] chr5 (37 HSPs)
chr5 (321-419)||(19021396-19021494)
chr5 (498-636)||(13625456-13625596)
chr5 (518-658)||(42852011-42852150)
chr5 (490-636)||(40152804-40152951)
chr5 (317-419)||(39143215-39143317)
chr5 (318-419)||(22639563-22639664)
chr5 (514-662)||(7364262-7364410)
chr5 (493-636)||(28625491-28625635)
chr5 (493-636)||(24030226-24030369)
chr5 (317-419)||(6537080-6537181)
chr5 (514-656)||(13060555-13060697)
chr5 (490-607)||(35536885-35537002)
chr5 (490-662)||(29922117-29922290)
chr5 (490-570)||(40697083-40697164)
chr5 (492-635)||(11912032-11912176)
chr5 (518-660)||(43318990-43319132)
chr5 (515-662)||(2878631-2878777)
chr5 (514-645)||(17657244-17657375)
chr5 (553-635)||(1868858-1868940)
chr5 (584-662)||(22201959-22202037)
chr5 (510-571)||(11163231-11163292)
chr5 (577-662)||(17128263-17128348)
chr5 (514-607)||(28357181-28357274)
chr5 (348-408)||(926759-926819)
chr5 (487-662)||(1371921-1372094)
chr5 (583-663)||(10537241-10537321)
chr5 (515-615)||(41419533-41419633)
chr5 (490-544)||(6125389-6125444)
chr5 (490-636)||(6144749-6144896)
chr5 (583-658)||(11991294-11991369)
chr5 (516-594)||(38498623-38498699)
chr5 (490-615)||(40452405-40452532)
chr5 (490-632)||(41059717-41059860)
chr5 (518-624)||(23087736-23087842)
chr5 (514-594)||(27805968-27806048)
chr5 (490-572)||(41125748-41125832)
chr5 (490-537)||(42558645-42558693)
[»] scaffold0041 (1 HSPs)
scaffold0041 (334-407)||(94900-94973)
[»] scaffold1367 (1 HSPs)
scaffold1367 (493-667)||(1038-1213)
[»] scaffold0300 (1 HSPs)
scaffold0300 (318-419)||(9581-9682)
[»] scaffold0037 (1 HSPs)
scaffold0037 (334-419)||(997-1082)
[»] scaffold0157 (1 HSPs)
scaffold0157 (490-659)||(24733-24905)
[»] scaffold0057 (1 HSPs)
scaffold0057 (490-662)||(24317-24489)
[»] scaffold0074 (1 HSPs)
scaffold0074 (329-419)||(23809-23899)


Alignment Details
Target: chr8 (Bit Score: 509; Significance: 0; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 12 - 686
Target Start/End: Original strand, 45547587 - 45548270
Alignment:
Q  12 tcatcaacttctggtatgttgtgcatcctagcatcctttgaacgatttctcgtcaacctcaaacaaaaatcagaagttatattttgttcaactaaatcac 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  45547587 tcatcaacttctggtatgttgtgcatcctagcatcctttgaacgatttctcgtcaacctcaaacaaaaatcagatgttacattttgttcaactaaatcac 45547686  T
Q  112 gaacttttctgaaattctttgcgagacgattatgtctatcaatcatctgcgttgcttgggaaatattacgtaacagggtagnnnnnnnnnngtt-----c 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||     |    
T  45547687 gaacttttctgaaattctttgcgagacgattatgtctatcaatcatctgcgttgcttgggaaatattacgtaacagggtagctttcttttttttttcttc 45547786  T
Q  207 cggttttggccatgggaaatctgatgttatattttgttcaactaaatctccgataatatccctttaccatgcttgggaatatttacg------ggtagct 300  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      |||||||    
T  45547787 atgttttggccatgggaaatctgatgttatattttgttcaactaaatctccgataatatccctttaccttgcttgggaatatttacgtaacagggtagct 45547886  T
Q  301 ttcttttttattcctgttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatc 400  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  45547887 ttcttttttgttcctgttttggcattcttgtaattgactctttcagctggggttttggcactccttgtgctgaaatctccaggctttcagtaatttaatc 45547986  T
Q  401 cagtttaatttcttaaaaataaacaaactatttttgatagacaaatnnnnnnnttaaatttaccacaaccacatgggccctgattgggattgagcttatg 500  Q
    || |||| ||||||||||| |||  ||||||||||| |||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  45547987 cattttagtttcttaaaaaaaaa--aactatttttggtagaaaaataaaaaaattaaatttaccacaaccacatgggccctgattgggattgagcttatg 45548084  T
Q  501 aaaaatatctttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaa 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  45548085 aaaaatatctttacaaataaataagcttttatattaactcataagtttttattaatgaaaattttatcttcctaagttgtattttcataaactattttaa 45548184  T
Q  601 caagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaatcggccaaaaggctttctc 686  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548185 caagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaatcggccaaaaggctttctc 45548270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 316 - 539
Target Start/End: Original strand, 45540318 - 45540534
Alignment:
Q  316 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 415  Q
    ||||| ||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||   | |||||| |||||||||||  |||| |||||||    
T  45540318 gttttagcattcttgcaattgactcttttagttggggttttggcattccttgtgctgaaatct---ggctttcagtaatttaatccgttttagtttctta 45540414  T
Q  416 aaaataaacaaactatttttgatagacaaatnnnnnnnttaaatttaccacaaccacatgggccctgattgggattgagcttatgaaaaatatctttaca 515  Q
    |||| ||||    ||||||  ||||| ||||       ||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  45540415 aaaaaaaac----tattttgaatagaaaaataaaaaaattaaatttaccacaaccacataggccctgattgggattgaacttatgaaaaatatttttaca 45540510  T
Q  516 aataaataagcttttatattaact 539  Q
    ||||||||| ||||||||||||||    
T  45540511 aataaataaacttttatattaact 45540534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 459 - 539
Target Start/End: Original strand, 45540695 - 45540776
Alignment:
Q  459 tttaccacaaccacatgggccctgattgggattgagcttatg-aaaaatatctttacaaataaataagcttttatattaact 539  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  45540695 tttaccacaaccacataggccctgattgggattgaacttatgaaaaaatatctttacaaataaataagcttttatattaact 45540776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 515 - 662
Target Start/End: Original strand, 32924167 - 32924313
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 614  Q
    ||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||  ||||||||  ||||||||||||  | ||||||||| | ||||    
T  32924167 aaataaataagcttttatattaattcataagttttcactaa-gaaaattttatcttcataagttgttttttcataaactacataaacaagcttataaata 32924265  T
Q  615 aaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    | |||||||||| ||||||||  ||| || | ||||||||||||||||    
T  32924266 acaaataaaagcatatttattcgcataagctgttttgcataagctcaa 32924313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 490 - 636
Target Start/End: Complemental strand, 32975845 - 32975698
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | |  ||| |||||| ||||||  ||||||||  ||||||    
T  32975845 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcacaaacaaaaattgtatcttcataagttgtgttttcat 32975746  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  || |||||||| ||||||| | |||||||| |||||||||    
T  32975745 aaactaccttgacaagcttatgaataatatataaaagcttatttattt 32975698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 34286492 - 34286638
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||||||  || | |||||||||||||||||||||||| ||||||||| |   ||||||||||| ||||||  |||| |||  |||||     
T  34286492 ttgagcttatgaaaaataggttatgcaaataaataagcttttatattaattcataagttctccctaacgaaaattgtatcttcataagctgt-ttttcac 34286590  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  || |||||||| ||||||| | |||||||| |||||||||    
T  34286591 aaactaccttgacaagcttatgaataatacataaaagcttatttattt 34286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 24504057 - 24504159
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    ||||||||  ||||||||||||||||| ||||| |||||||||| |||||||||||||||||| |  |||||| |  ||||||||| |||| |||||| |    
T  24504057 ttttggcacacttgtaattgactcttttagctgaggttttggcattccttgtgctgaaatctctatgctttcagttttttaatccattttagtttcttca 24504156  T
Q  417 aaa 419  Q
    |||    
T  24504157 aaa 24504159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 490 - 625
Target Start/End: Complemental strand, 38895817 - 38895681
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||| ||  || |||||||||||||| ||||||||||| | ||||||||| | |||| || ||| ||||||  ||| || |  ||||||    
T  38895817 ttgagcttatgaaaattagtttatacaaataaataagtttttatattaatttataagttttcactaacaaatattgtatcttcataaattattttttcat 38895718  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaag 625  Q
    ||||||  ||||||||||| ||||||| |||||||||    
T  38895717 aaactaccttaacaagcttatgaataataaataaaag 38895681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 8444356 - 8444258
Alignment:
Q  318 tttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaa 417  Q
    ||||||| |||||||||||||||||| | |||||||||||||| || ||||||||||||||| || ||   |||| ||||||||| |||| |||||| ||    
T  8444356 tttggcactcttgtaattgactcttttaactggggttttggcactctttgtgctgaaatctctaggct---attattttaatccattttagtttcttcaa 8444260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 24350447 - 24350594
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||| || ||| | |||||||||||| |||||| |||| ||||||||| ||| ||||||||||| ||||||  |||| | |  ||||||    
T  24350447 ttgagcttatgaaaactagcttatgcaaataaataagattttatgttaattcataagttcttactaacgaaaattatatcttcataagctattttttcat 24350546  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||| ||  || |||||||| ||||||| | |||||||| || ||||||    
T  24350547 aaattacgttgacaagcttatgaataatatataaaagcttaattattt 24350594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 660
Target Start/End: Complemental strand, 14942585 - 14942411
Alignment:
Q  487 ggattgagcttatgaaaaatatcttta-caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    |||| ||||||||| |||||| ||||  |||||||||||| |||||| |||| | ||||||| ||  |||| ||||||  |||||  ||||| ||  |||    
T  14942585 ggatggagcttatggaaaatagcttttgcaaataaataaggttttatgttaatttataagttcttgctaacaaaaattgcatcttcataagtcgtttttt 14942486  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 660  Q
    |||||||||  ||||||||||| | ||||| | | |||||| ||||||| | ||| |||| |||| |||||||||    
T  14942485 cataaactaacttaacaagcttataaataatacacaaaagcttatttatatacataagttgttttacataagctc 14942411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 496 - 593
Target Start/End: Original strand, 25465781 - 25465878
Alignment:
Q  496 ttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaact 593  Q
    |||||||||||| ||| | ||||||||||||||||||| |||| ||||||||||| | |||| |||||| ||||||  ||||||||  |||||||||||    
T  25465781 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcagtaacaaaaattgtatcttcataagttgt-ttttcataaact 25465878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 428
Target Start/End: Complemental strand, 13089850 - 13089752
Alignment:
Q  334 ttgactctttcagctggggttttggca----atccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaataaacaaac 428  Q
    |||||||||||||||||||||||||||     ||||||||||||||||||||| |||| | |||| ||||||| ||||  ||||| |||| ||| ||||    
T  13089850 ttgactctttcagctggggttttggcactccttccttgtgctgaaatctccagacttttagtaatataatccattttagcttcttcaaaaaaaaaaaac 13089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 662
Target Start/End: Complemental strand, 32131598 - 32131425
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||||||  || | |||||| |||||||||||| |||| ||||||||| | | ||  ||||||| ||||||  || |||||   |||||    
T  32131598 ttgagcttatgaaaaatagtttatgcaaatagataagcttttatgttaattcataagttctcactattgaaaattgtatcttcataggttgtttattcat 32131499  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||| |||  ||||||   |||||||| ||||||||| ||| || | ||||||||||||||||    
T  32131498 aaactaccttgacaaacttaggaataatgcataaaagcttatttatttgcataagctgttttgcataagctcaa 32131425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 10230191 - 10230099
Alignment:
Q  327 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    ||||||||||||||||| || ||  | |||| || | ||| ||||||||||||||| |||||||| |||||||| | |||| |||||||||||    
T  10230191 cttgtaattgactcttttagttgaagctttgacacttcttatgctgaaatctccagactttcattgatttaatcaattttagtttcttaaaaa 10230099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 24581536 - 24581444
Alignment:
Q  327 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    ||||||||||| ||||||||||||||||||| || ||||| | ||||||| | ||| |||||| |||| |||| || ||||  ||||||||||    
T  24581536 cttgtaattgattctttcagctggggttttgacactccttatactgaaatattcagactttcaataatataattcattttagcttcttaaaaa 24581444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 41145324 - 41145473
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||||||  || | |||||||||||| || |||||||| ||||||||| | | ||| ||||||  |||||||  |||||||  ||||||    
T  41145324 ttgagcttatgaaaaatagtttatgcaaataaataagtttatatattaattcataagttctcactaatgaaaatcgtatcttt-aaagttgttttttcat 41145422  T
Q  589 aaactattttaacaagcttgtg---aataaaaaataaaagcgtatttattt 636  Q
    ||||||  ||||||| ||| ||   ||||| |||||||||| |||||||||    
T  41145423 aaactaccttaacaaacttatgaataataataaataaaagcttatttattt 41145473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 625
Target Start/End: Original strand, 14724918 - 14725029
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||| |||||| |||| ||||||||| ||||||||||||||| || ||   ||||||||  ||||||||| ||  ||||||| ||| | |||    
T  14724918 caaataaataagtttttatcttaattcataagttcttattaacgaaaattatacctacataagttgttttttcataaattacattaacaatcttataaat 14725017  T
Q  614 aaaaaataaaag 625  Q
    || | |||||||    
T  14725018 aatatataaaag 14725029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 659
Target Start/End: Original strand, 16972284 - 16972455
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||  |||||| ||| | ||||||||||| |||||||||| | ||||||||| | | ||||||||||| ||||||  |||| |||  ||||||    
T  16972284 ttgagcttattcaaaatagcttatgcaaataaataaacttttatattgattcataagttatcactaacgaaaattgtatcttcataagctgttttttcat 16972383  T
Q  589 aaactatttta-acaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 659  Q
     |||||  ||| |||| ||| ||||||| | ||| |||| ||||||||| ||  | || |||||||||||||    
T  16972384 gaactaccttagacaaacttatgaataatacatacaagcttatttatttgcaaaaattgttttgcataagct 16972455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 515 - 570
Target Start/End: Original strand, 25333655 - 25333710
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||| ||||||    
T  25333655 aaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatctt 25333710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 493 - 636
Target Start/End: Complemental strand, 28879210 - 28879069
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagt--ttttattaacgaaaattttatctttctaagttgtactttcata 589  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||||  ||| | |||| |||     |||||  ||||||||  |||||||    
T  28879210 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctttcactaacaaaa-----atcttcataagttgttatttcata 28879116  T
Q  590 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    |||||  || |||||||| ||||||| | |||||||| |||||||||    
T  28879115 aactaccttgacaagcttatgaataatacataaaagcttatttattt 28879069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 603
Target Start/End: Complemental strand, 2563519 - 2563402
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||| | ||| ||||||||| || |||||||| |||| ||||||| | ||| |||  |||||| ||| ||   |||||||  |||    
T  2563519 ggattgagcttatgaaaaagagcttatacaaataattatgcttttatgttaattcataagatcttactaataaaaattgtatattcaaaagttgtttttt 2563420  T
Q  586 cataaactattttaacaa 603  Q
    ||||||||| ||||||||    
T  2563419 cataaactactttaacaa 2563402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 562
Target Start/End: Complemental strand, 24087321 - 24087256
Alignment:
Q  498 atgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaat 562  Q
    |||||||||| ||| | ||||||||||||||||||| |||| | ||||||||| ||||||||||||    
T  24087321 atgaaaaatagcttatgcaaataaataagcttttattttaatttataagttttcattaacgaaaat 24087256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 490 - 613
Target Start/End: Original strand, 10298855 - 10298978
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||| |||| ||| | |||||| ||| |||||||| |||| ||||||||| | |||||| |||||| ||||||  |||| |||  ||||||    
T  10298855 ttgagcttatgaataatagcttatgcaaatagata-gcttttatgttaattcataagttctcattaacaaaaattgtatcttcataagctgttttttcat 10298953  T
Q  589 aaactattttaacaagcttgtgaat 613  Q
    ||||||  || |||||||| |||||    
T  10298954 aaactaccttgacaagcttatgaat 10298978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 662
Target Start/End: Original strand, 26046978 - 26047057
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||||||||  | ||||||||||| ||||| |||||||||| || || ||| ||| |||| |||| |||||||||||    
T  26046978 tttcataaactacctcaacaagcttgttaataataaataaaagcttacttttttgcataagttgttttacataagctcaa 26047057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 593
Target Start/End: Complemental strand, 30974150 - 30974043
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    |||||| |||||||||||| | ||| | |||||||||||||||||||  ||| ||||||| | ||| ||||||||||| ||  ||  ||||||||  |||    
T  30974150 ggattgtgcttatgaaaaagagcttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtaaattcataagttgtttttt 30974051  T
Q  586 cataaact 593  Q
    ||||||||    
T  30974050 cataaact 30974043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 636
Target Start/End: Complemental strand, 2669809 - 2669659
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||| | ||| |  |||||||||||||||||| |||| ||||||| |  || ||| ||||| | ||| ||  ||||||||  |||    
T  2669809 ggattgagcttatgaaaaagagcttatgaaaataaataagcttttatgttaattcataagatcctactaatgaaaaatgtatattcataagttgtttttt 2669710  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    |||||||||  ||||||| ||| | ||||| | || | ||| |||||||||    
T  2669709 cataaactaccttaacaaacttataaataatacattagagcttatttattt 2669659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 570
Target Start/End: Original strand, 9131059 - 9131137
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    ||||||||||||||| ||| | ||||||||||| ||||||| |||| |||||||||   | ||||||||||| ||||||    
T  9131059 agcttatgaaaaatagcttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatctt 9131137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 547
Target Start/End: Complemental strand, 10213853 - 10213795
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 547  Q
    |||||||||||||||||| ||| | ||||||||||||||| ||| |||| |||||||||    
T  10213853 ttgagcttatgaaaaatagcttatgcaaataaataagcttgtatgttaattcataagtt 10213795  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 616 - 662
Target Start/End: Original strand, 11988308 - 11988354
Alignment:
Q  616 aaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  11988308 aaaataaaagcatatttatttacataagttatttttcataagctcaa 11988354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 616 - 661
Target Start/End: Original strand, 29713289 - 29713334
Alignment:
Q  616 aaaataaaagcgtatttattttcattagttattttgcataagctca 661  Q
    ||||||||||| ||||||||| ||| ||||||||| ||||||||||    
T  29713289 aaaataaaagcttatttatttacataagttatttttcataagctca 29713334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 570
Target Start/End: Complemental strand, 35055579 - 35055499
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| |||| ||||||| | | | ||||||||||| ||||||    
T  35055579 ttgagcttatgaaaaatagcttatgtaaataaataagcttttat-ttaattcataagctctcactaacgaaaattgtatctt 35055499  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 603
Target Start/End: Original strand, 36907597 - 36907686
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaa 603  Q
    |||||||||||||||||||  ||| ||||||| | ||| ||||||||||| ||| ||   |||||||  ||||||||||||  |||||||    
T  36907597 caaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcacaagttgttttttcataaactaccttaacaa 36907686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 37410841 - 37410922
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  ||||||||||| || ||| |||| | ||||||| ||| ||||||||||| ||||||    
T  37410841 ttgagcttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagttcttactaacgaaaattgtatctt 37410922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 570
Target Start/End: Complemental strand, 42102264 - 42102183
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| |||| | ||||  | | ||||||||||||| ||||||    
T  42102264 ttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataacctctcattaacgaaaattgtatctt 42102183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 619 - 667
Target Start/End: Original strand, 2669763 - 2669811
Alignment:
Q  619 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||| ||||||||||||| || | |||| ||||||||||||||||    
T  2669763 ataaaagcttatttattttcataagctctttttcataagctcaatccaa 2669811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 547
Target Start/End: Complemental strand, 8752965 - 8752906
Alignment:
Q  490 ttgagcttatgaaaaatatctttac--aaataaataagcttttatattaactcataagtt 547  Q
    |||||||||||||||||| ||| |   |||||||||||||||||| |||| |||||||||    
T  8752965 ttgagcttatgaaaaataacttaatgtaaataaataagcttttatgttaattcataagtt 8752906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 527 - 607
Target Start/End: Complemental strand, 9782303 - 9782223
Alignment:
Q  527 ttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagctt 607  Q
    |||||| |||| ||||||| | ||| ||||||||||| ||| ||  ||||||||  ||| |||||||| ||||||||||||    
T  9782303 ttttatgttaattcataagatcttactaacgaaaattgtatattcataagttgttttttaataaactactttaacaagctt 9782223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 658
Target Start/End: Complemental strand, 19925718 - 19925546
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| |  |||||||||||  ||||| |||| |  |||| | | | ||||||||||| ||||||  ||| ||||  |||    
T  19925718 ggattgagcttatgaaaaatagcttatgtaaataaataagtatttattttaatttgtaagctctcactaacgaaaattgtatcttcataaattgtttttt 19925619  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagc 658  Q
    | |||| ||  ||||||| ||| | ||||| || ||||||| ||||||||| ||| || | ||||| ||||||    
T  19925618 cgtaaaataccttaacaaacttataaataataattaaaagcttatttatttgcataagctgttttgtataagc 19925546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 487 - 662
Target Start/End: Complemental strand, 21788618 - 21788442
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||| | | | ||||||||||||||||||  ||||||||  |||    
T  21788618 ggattgagcttatgaaaaataacttatgcaaataaataagcttttatattaattcataagctctcactaacgaaaattttatcttcataagttgtttttt 21788519  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    |||||||||| ||||||||||| ||||||| |||||||||| ||||||||| ||| || | |||||||||| |||||    
T  21788518 cataaactatcttaacaagcttatgaataataaataaaagcttatttatttgcataagatgttttgcataaactcaa 21788442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 316 - 419
Target Start/End: Complemental strand, 2702356 - 2702253
Alignment:
Q  316 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  || |||||| || ||||||||| |||| ||||||     
T  2702356 gttttggcattcttgtaattgactctttcagctggggttttggcactccttgtgctgaaatcttgaggctttcagtattttaatccattttagtttcttt 2702257  T
Q  416 aaaa 419  Q
    ||||    
T  2702256 aaaa 2702253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 37647968 - 37648070
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    ||||| || |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||  |||||| || ||||||||| |||||||||||||    
T  37647968 ttttgacactcttgtaattgactcttttagctgaggttttggcactccttgtgctgaaatctccaaactttcagtattttaatccattttaatttcttaa 37648067  T
Q  417 aaa 419  Q
    |||    
T  37648068 aaa 37648070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 332 - 419
Target Start/End: Original strand, 27271658 - 27271745
Alignment:
Q  332 aattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||| |||||||||| | |||| |||||||||||    
T  27271658 aattgactctttcagctggagttttgacactccttgtgctgaaatctccaggctttcagtaatttaatctattttagtttcttaaaaa 27271745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 12410790 - 12410892
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||||||| ||||||||||||| || || ||||| |||||||||||| |||||| || ||||||||| |||| |||||| |    
T  12410790 ttttggcactcttgtaattgactcttttagctggggttttgtcactctttgtgatgaaatctccaggctttcagtattttaatccattttagtttcttca 12410889  T
Q  417 aaa 419  Q
    |||    
T  12410890 aaa 12410892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 12422850 - 12422952
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||||||| ||||||||||||| || || ||||| |||||||||||| |||||| || ||||||||| |||| |||||| |    
T  12422850 ttttggcactcttgtaattgactcttttagctggggttttgtcactctttgtgatgaaatctccaggctttcagtattttaatccattttagtttcttca 12422949  T
Q  417 aaa 419  Q
    |||    
T  12422950 aaa 12422952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 6764423 - 6764525
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||||||| ||||||||||||| || ||||| |||||||||||||   |||||| || ||||||||| |||| |||||| |    
T  6764423 ttttggcactcttgtaattgactcttttagctggggttttgacactccttatgctgaaatctccgagctttcagtattttaatccattttagtttcttca 6764522  T
Q  417 aaa 419  Q
    |||    
T  6764523 aaa 6764525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 493 - 594
Target Start/End: Complemental strand, 8832612 - 8832510
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||||||| | ||||||||||| |||||||||||  |||  |||||||||    
T  8832612 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatctttctaacctgtgttttcataaa 8832513  T
Q  592 cta 594  Q
    |||    
T  8832512 cta 8832510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 325 - 419
Target Start/End: Original strand, 11031809 - 11031903
Alignment:
Q  325 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||| | || || ||||  ||||||||||    
T  11031809 ttcttgtatttgactctttcagctggggttttggcactccttatgctgaaatctccagactttcaataatatcattcattttagcttcttaaaaa 11031903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 645
Target Start/End: Complemental strand, 4004977 - 4004821
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||| |||||||||||| ||| | || ||||| ||||||||||| ||| ||||||||| | | ||||||||||| || |||  ||||||||| ||||||    
T  4004977 ttgagtttatgaaaaatagcttatgcagataaaaaagcttttatagtaattcataagttctcactaacgaaaattgtagcttcataagttgtattttcat 4004878  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagtt 645  Q
    |||||| ||||| |||||| ||||||  | |||||||  ||||||||| ||| ||||    
T  4004877 aaactactttaaaaagcttatgaatagtacataaaagattatttatttgcataagtt 4004821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 34394572 - 34394480
Alignment:
Q  327 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||  || |||||| |||| |||| || ||||| ||||| ||||    
T  34394572 cttgtaattgactctttcagctggggttttggcactccttgtgttgaaatctttaggctttcagtaatataattcattttaacttcttcaaaa 34394480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 493 - 662
Target Start/End: Complemental strand, 4027080 - 4026911
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | |||||||||||||| |||| |||| ||||||||| | | |||| |||||| ||||||  |||| |||  |||||||||    
T  4027080 agcttatgaaaaatagcttatgcaaataaataagctattatgttaattcataagttctcactaacaaaaattgtatcttcataagctgttttttcataaa 4026981  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    |||  || |||||||| || |||| | |||||||| ||||||||| ||| ||   ||||||||||||||||    
T  4026980 ctaccttgacaagcttatg-ataatacataaaagcttatttatttgcataagcagttttgcataagctcaa 4026911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 573 - 667
Target Start/End: Original strand, 34913402 - 34913496
Alignment:
Q  573 taagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    ||||||||  ||||||||||||| ||||||| ||| ||||||| | |||||||| ||||||||| ||| || | |||||||||||||||||||||    
T  34913402 taagttgttttttcataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaatccaa 34913496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 658
Target Start/End: Complemental strand, 15155971 - 15155802
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||| | ||| |  ||||||||||| |||||| |||| ||||||||| | ||||||| ||||| || |||  ||| ||||  ||||||    
T  15155971 ttgagcttatgaaaaagagcttatgaaaataaataagtttttatcttaattcataagttctcattaacggaaattgtaccttcttaaattgttttttcat 15155872  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagc 658  Q
    |||||   |||||||| || | ||||| | |||||||| ||||||||||||| |||| |||| |||||||    
T  15155871 aaacttcattaacaagattataaataatacataaaagcatatttattttcataagttgttttacataagc 15155802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 662
Target Start/End: Original strand, 33321240 - 33321413
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||| |||||| ||| | ||||||||||| | ||||| |||| ||| ||| | | | |||| |||||| ||||||  |||| |||  ||||||    
T  33321240 ttgagcttatgtaaaatagcttatgcaaataaataaacctttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcat 33321339  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||||||| ||||||| | |||||||| ||||||||| ||  |||| ||||||||||||||||    
T  33321340 aaactaccttgacaagcttatgaataagacataaaagcttatttatttgcacaagttgttttgcataagctcaa 33321413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 514 - 615
Target Start/End: Complemental strand, 42064984 - 42064883
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||  ||||||  |||||| |  ||| ||||||||  ||||||||||| |||||    
T  42064984 caaataaataagcttttatattaattcataagttcttactaacgaaaatgatatcttcataagttatttttttataaactaccttaacaagcttatgaat 42064885  T
Q  614 aa 615  Q
    ||    
T  42064884 aa 42064883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 624
Target Start/End: Original strand, 36501443 - 36501578
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||| ||||||||| ||| | ||||||||||||||||||| |||| |||| |||| | | ||||| ||||||||||||  |||| |||  ||||||    
T  36501443 ttgagcttgtgaaaaatagcttatgcaaataaataagcttttatgttaattcatgagttctcactaacgcaaattttatcttcataagctgttttttcat 36501542  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaa 624  Q
    ||||||  || |||||||| ||||||| | ||||||    
T  36501543 aaactaccttgacaagcttatgaataatacataaaa 36501578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 493 - 570
Target Start/End: Complemental strand, 38216174 - 38216096
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||| |||||||| ||| | ||||||||||||||||||| |||||||||||||| | | ||||||||||| ||||||    
T  38216174 agcttacgaaaaatagcttatgcaaataaataagcttttatgttaactcataagttctcactaacgaaaattgtatctt 38216096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 634
Target Start/End: Complemental strand, 11777145 - 11776997
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||| ||||||| ||| | |||||||||||| |||||| |||  | ||||||| | | |||| |||| | ||||||  |||| |||  |||    
T  11777145 ggattgagcttattaaaaatagcttctgcaaataaataaggttttatgttagtttataagttctcactaacaaaaagtgtatcttcataagctgtgtttt 11777046  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttat 634  Q
    |||||||||  ||||||||||| | ||||| | |||||||| |||||||    
T  11777045 cataaactaacttaacaagcttataaataatacataaaagcttatttat 11776997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 25836641 - 25836787
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||| |||  ||||||||| | | |||||| |||| | ||||  ||||  ||  ||||||    
T  25836641 ttgagcttatgaagaataccttatgcaaataaataagcttttatgttat-tcataagttctcactaacgataattgtgtcttcataagccgttttttcat 25836739  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  || |||||||| ||||||| | |||||||| |||||||||    
T  25836740 aaactaccttgacaagcttatgaataatacataaaagcatatttattt 25836787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 659
Target Start/End: Complemental strand, 29774878 - 29774733
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||||||||||  |||| ||||||||| | | ||||||||||| ||| ||  ||||  ||  ||||||||||||  ||||||| ||  |||||    
T  29774878 caaataaataagcttttacgttaattcataagttctcactaacgaaaattgtattttcataagccgttttttcataaactaccttaacaaactaatgaat 29774779  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagct 659  Q
    ||   |||||||  ||||||||| ||| |||| || ||||||||||    
T  29774778 aatgcataaaagtttatttatttgcataagttgttatgcataagct 29774733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 662
Target Start/End: Complemental strand, 37409801 - 37409628
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| ||||| ||| |||| |||||| |||| |   ||||||| | |||| |||||| ||| ||  ||| ||||  ||||||    
T  37409801 ttgagcttatgaaaaatagcttatacaagtaactaagattttatgttaatttcgaagttttcaataacaaaaattgtattttcataaattgttttttcat 37409702  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||| || | |||||| |  ||||||| ||||||||| ||| |||| ||||||||| ||||||    
T  37409701 aaactacattgacaaactagagaataatacttaaaagcttatttatttgcataagttgttttgcatacgctcaa 37409628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 667
Target Start/End: Original strand, 21788572 - 21788620
Alignment:
Q  619 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||| ||||||||| ||| ||||||||| ||||||||||||||||    
T  21788572 ataaaagcttatttatttgcataagttatttttcataagctcaatccaa 21788620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 580
Target Start/End: Complemental strand, 35731271 - 35731203
Alignment:
Q  512 tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgt 580  Q
    |||||||||||||| |||||  |||| ||||||| ||| ||||| ||||||||||| ||| ||||||||    
T  35731271 tacaaataaataagattttacgttaattcataagatttcattaatgaaaattttatttttataagttgt 35731203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 660
Target Start/End: Original strand, 38471718 - 38471890
Alignment:
Q  489 attgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttca 587  Q
    ||||| ||||||||||| | ||| |||||||||||||  | |||| |||| ||||||||| | | ||||||||||| || |||  |||  |||  |||||    
T  38471718 attgaacttatgaaaaagaacttatacaaataaataaattgttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttca 38471817  T
Q  588 taaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 660  Q
    |||||||  | || |||||| |  |||| | |||||||| ||||||||| ||| || | ||||||||||||||    
T  38471818 taaactacatcaagaagcttatacataacacataaaagcatatttatttgcataagctgttttgcataagctc 38471890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 662
Target Start/End: Original strand, 755764 - 755843
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||||||||   |||||||||| ||||||| | |||||||| || |||||| | | |||| ||||||||||||||||    
T  755764 tttcataaactaccgtaacaagcttctgaataatacataaaagcttaattatttgcgtaagttgttttgcataagctcaa 755843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 592
Target Start/End: Original strand, 30382197 - 30382300
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||||||  || |  |||||||||||||||| | |||| | ||||| ||| | ||||||||||| |||||| |||| |||| ||||| |    
T  30382197 ttgagcttatgaaaaatagattatgtaaataaataagcttttgttttaatttataagctttcactaacgaaaattgtatcttcctaaattgttctttcgt 30382296  T
Q  589 aaac 592  Q
    ||||    
T  30382297 aaac 30382300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 7480852 - 7480918
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgt 580  Q
    |||||||||||| |||||| |||| ||||||||| | | ||| ||||||| |||||| |||||||||    
T  7480852 caaataaataagtttttatgttaattcataagttctgactaatgaaaattgtatcttcctaagttgt 7480918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 580
Target Start/End: Original strand, 12950040 - 12950134
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgt 580  Q
    ||||||||||||||||||| | | | | ||||||| ||||||||||| |||| ||||||| | ||| ||||||||||| ||| ||  ||||||||    
T  12950040 ggattgagcttatgaaaaagagcatatgcaaataattaagcttttatgttaattcataagatcttactaacgaaaattctatattcataagttgt 12950134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 563
Target Start/End: Original strand, 22898285 - 22898359
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| ||||   ||||||||| | |||||||||||    
T  22898285 ttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttttgactaacgaaaatt 22898359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 571
Target Start/End: Original strand, 23956217 - 23956274
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatcttt 571  Q
    |||||||||||| |||||| |||| | ||||||| | ||||||||||||| |||||||    
T  23956217 caaataaataagtttttatgttaatttataagttctcattaacgaaaattgtatcttt 23956274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 515 - 603
Target Start/End: Original strand, 16108076 - 16108164
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaa 603  Q
    |||||| ||||| ||||| |||| ||||||| ||| |||||| |||||| ||| ||  ||||||||  ||||||||||||  |||||||    
T  16108076 aaataattaagcgtttatgttaattcataagatttaattaacaaaaattgtatattcataagttgttttttcataaactaccttaacaa 16108164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 9e-41; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 487 - 667
Target Start/End: Original strand, 44613398 - 44613579
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | |||||  |||||| |||| |  ||||||||  |||    
T  44613398 ggattgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctaattaataaaaattgtatcgtcataagttgtttttt 44613497  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||||  ||||||||||| ||||||| |||||||||| ||||||||| ||| || | |||||||||||||||||||||    
T  44613498 cataaactaccttaacaagcttatgaataataaataaaagcttatttatttgcataagctgttttgcataagctcaatccaa 44613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 316 - 428
Target Start/End: Original strand, 1032222 - 1032334
Alignment:
Q  316 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 415  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||| ||||||| |||| |||| |||||||    
T  1032222 gttttggcattcttgtaattgactctttcagctggggttttagcattccctgtgctgaaatctccaggctttcagtaatttagtccaatttagtttctta 1032321  T
Q  416 aaaataaacaaac 428  Q
    |||| ||| ||||    
T  1032322 aaaaaaaaaaaac 1032334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 317 - 419
Target Start/End: Complemental strand, 28782112 - 28782010
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||| |||||| |    
T  28782112 ttttggcactcttgtaattgactcttttagctggggttttggcactccttgtgctgaaatctccaggctttcagtattttaatccattttagtttcttca 28782013  T
Q  417 aaa 419  Q
    |||    
T  28782012 aaa 28782010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 9948933 - 9949035
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||| |||||| || ||||||||| |||| |||||| |    
T  9948933 ttttggcactcttgtaattgactcttttagctggggttttggtactccttgtgctgaaatcttcaggctttcagtattttaatccattttagtttcttca 9949032  T
Q  417 aaa 419  Q
    |||    
T  9949033 aaa 9949035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 330 - 407
Target Start/End: Original strand, 11621380 - 11621457
Alignment:
Q  330 gtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 407  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  11621380 gtaattgactctttcagctggggttttggcactccttgtgctgaaatctccaggctttcagtaatataatccatttta 11621457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 317 - 419
Target Start/End: Complemental strand, 9942699 - 9942597
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||| ||| || || ||||||| || ||||||||||||||||||||| |||||| || ||||||||| |||| ||||||||    
T  9942699 ttttggcactcttgtaattgactattttagttgaggttttgacactccttgtgctgaaatctccagactttcagtattttaatccattttagtttcttaa 9942600  T
Q  417 aaa 419  Q
    |||    
T  9942599 aaa 9942597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 518 - 662
Target Start/End: Original strand, 48021605 - 48021748
Alignment:
Q  518 taaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaa 617  Q
    |||||||  ||||||||||| ||||||||||| | ||| ||||||| ||||||  | |||| |  |||||||||||| |||||||||||| ||||||| |    
T  48021605 taaataattttttatattaattcataagttttcactaatgaaaattgtatcttcattagttatt-tttcataaactactttaacaagcttatgaataata 48021703  T
Q  618 aataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||| ||| ||||||||| ||| | || ||||| ||||||||||    
T  48021704 aataagagcttatttatttgcataaattgttttgtataagctcaa 48021748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 615
Target Start/End: Complemental strand, 39279588 - 39279461
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagttttta-ttaacgaaaattttatctttctaagttgtactttca 587  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||| ||| | | |||||||||||| |||||| ||||| ||   |||||    
T  39279588 ttgagcttatgaaaaatagcttatacaaataaataagcttttatgttaattcataggttctcaattaacgaaaattgtatcttcctaagctgatttttca 39279489  T
Q  588 taaactattttaacaagcttgtgaataa 615  Q
    ||||| |  ||||||||||| |||||||    
T  39279488 taaaccaccttaacaagcttatgaataa 39279461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 667
Target Start/End: Original strand, 28759790 - 28759946
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaatt---ttatctttctaagttgtactttcataaactattttaacaagcttgtg 610  Q
    |||| |||||||||||||||| || ||||||||| ||| |||| || |||   |||||||| |||||| |  ||| ||||||||  ||||||||||| ||    
T  28759790 caaacaaataagcttttatatcaattcataagttcttactaacaaatattatattatctttataagttatttttttataaactaccttaacaagcttatg 28759889  T
Q  611 aataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    ||||| |||||||| | | ||| ||||||| |||| |||| ||||| ||||||||||    
T  28759890 aataataaataaaaactttttttttttcataagttgttttacataaactcaatccaa 28759946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 662
Target Start/End: Original strand, 29390479 - 29390651
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||||||  || | ||||||||||||||||||| |||| |||||| || |   ||||||||||| ||||||  ||||||||  ||||||    
T  29390479 ttgagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataaattctagctaacgaaaattgtatcttcataagttgtt-tttcat 29390577  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||||||| ||||||| | || ||||  ||||||||| ||| |||| |||| ||||| |||||    
T  29390578 aaactacctttacaagcttatgaataatacatcaaagattatttatttgcataagttgttttccataaactcaa 29390651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 334 - 407
Target Start/End: Complemental strand, 40871382 - 40871309
Alignment:
Q  334 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 407  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  40871382 ttgactctttcagctgggattttggcactccttgtgctgaaatctccaggcttttaataatataatccatttta 40871309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 660
Target Start/End: Complemental strand, 22032920 - 22032749
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||| | ||| | |||||||||||| |||||| |||| | ||||||| | | ||||||||||| || |||  ||| ||||  ||||||    
T  22032920 ttgagcttatgaaaaaaagcttatgcaaataaataagtttttatcttaatttataagttctcactaacgaaaattgtaccttcataaattgttttttcat 22032821  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 660  Q
    ||||||  |||||| |||| | ||||| | |||||| | ||||||||| ||| |||| |||| |||||||||    
T  22032820 aaactacattaacatgcttataaataatacataaaaacatatttatttgcataagttgttttacataagctc 22032749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 636
Target Start/End: Complemental strand, 29378803 - 29378656
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||| |||||||||||| ||| | ||||||||||||||||||  |||| ||||||||| ||| ||||||||||| ||||||  |||| |||  ||||||    
T  29378803 ttgagtttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttcttactaacgaaaattgtatcttcataagctgttttttcat 29378704  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  || |||| ||  | ||||| | |||||||| |||||||||    
T  29378703 aaactaccttgacaaactcataaataatacataaaagcttatttattt 29378656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 487 - 607
Target Start/End: Original strand, 47654339 - 47654460
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||| ||||| | |||||||||||| |||||| |||| ||||||||| | | ||||||||||| || |||  |||  |||  |||    
T  47654339 ggattgagcttatgaaaaagatcttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgtttttt 47654438  T
Q  586 cataaactattttaacaagctt 607  Q
    |||||||||  |||||||||||    
T  47654439 cataaactacattaacaagctt 47654460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 487 - 625
Target Start/End: Original strand, 37465811 - 37465951
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    |||| ||||||||||||| || ||| | |||||||||||||||||||||||| ||||||||| |    ||| || ||| ||||||  ||||||||  |||    
T  37465811 ggatcgagcttatgaaaattagcttatgcaaataaataagcttttatattaattcataagttctcgccaacaaatattgtatcttaataagttgtttttt 37465910  T
Q  586 c-ataaactattttaacaagcttgtgaataaaaaataaaag 625  Q
    | ||||||||| |||||||| || ||||||| |||||||||    
T  37465911 ctataaactatcttaacaagtttatgaataataaataaaag 37465951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 636
Target Start/End: Complemental strand, 47648670 - 47648549
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||   ||||||||||| ||||||||||| | ||||||||| || |||||  ||  ||||  ||||||||||||| |||||||| | ||||||    
T  47648670 caaataaatatatttttatattaattcataagttttcactaacgaaaaatt-atcttaatagattgttttttcataaactatcttaacaagttcgtgaat 47648572  T
Q  614 aaaaaataaaagcgtatttattt 636  Q
    || |||||||||  |||||||||    
T  47648571 aataaataaaagtttatttattt 47648549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 662
Target Start/End: Complemental strand, 38372716 - 38372543
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||  | ||||||||| ||||||||| |||| ||||||||| | | ||||||||||| | ||||  | || ||   |||| |    
T  38372716 ttgagcttatgaaaaatagctaatgcaaataaatcagcttttatgttaattcataagttctcactaacgaaaattgtttcttcttgagctgctttttcgt 38372617  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||| ||| ||||||| | |||| ||| ||||||||| ||| || | ||||||||||||||||    
T  38372616 aaactaccttgacaaacttatgaataatacataagagcttatttatttgcataagctgttttgcataagctcaa 38372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 626
Target Start/End: Original strand, 14691252 - 14691364
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||| ||||||| |||| ||||||||| | | ||||||||||| ||||||  ||| ||||  ||||||||| ||  || |||||||| |||||    
T  14691252 caaataaataaccttttatgttaattcataagttctcactaacgaaaattatatcttcataaattgttttttcataaattacattgacaagcttatgaat 14691351  T
Q  614 aaaaaataaaagc 626  Q
    || | ||||||||    
T  14691352 aatacataaaagc 14691364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 660
Target Start/End: Complemental strand, 22575741 - 22575573
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| |  | ||||||||| |||||| |||| | ||||| | ||| ||||||||||| ||||||  |||  |||  |||||||||    
T  22575741 agcttatgaaaaatagcttatgtagataaataagtttttattttaatttataagctcttactaacgaaaattgtatcttcataaactgttttttcataaa 22575642  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 660  Q
     ||| ||||||| ||| | ||||| | |||||| ||||||||||| ||| || | |||| |||||||||    
T  22575641 atatcttaacaaacttataaataatacataaaaacgtatttatttgcataagatgttttacataagctc 22575573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 33204989 - 33204934
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 547  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||| |||||||||    
T  33204989 agcttatgaaaaatatcttatgcaaataaataagcttttatgttaattcataagtt 33204934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 16932858 - 16932939
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  | |||||||||||||||| |||| | ||||| ||||| ||||||||||| ||||||    
T  16932858 ttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatctt 16932939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 16938241 - 16938322
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  | |||||||||||||||| |||| | ||||| ||||| ||||||||||| ||||||    
T  16938241 ttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatctt 16938322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Complemental strand, 16958973 - 16958892
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  | |||||||||||||||| |||| | ||||| ||||| ||||||||||| ||||||    
T  16958973 ttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatctt 16958892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 33288003 - 33288084
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    ||||||||||||||| || ||| | |||||||||||| |||||| |||| ||||||||||| | ||||||||| | ||||||    
T  33288003 ttgagcttatgaaaactagcttatccaaataaataagtttttatgttaattcataagttttcactaacgaaaactgtatctt 33288084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 17193972 - 17193881
Alignment:
Q  327 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    ||||||||||||| ||||||||||| ||| | || ||||| | ||||||||||| | |||||| || |||||| || ||||| ||||||||||    
T  17193972 cttgtaattgactgtttcagctgggattt-gacactccttatactgaaatctcccggctttcagtattttaatacattttaacttcttaaaaa 17193881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 652
Target Start/End: Complemental strand, 34923091 - 34922926
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttg--tactttc 586  Q
    |||||||||| ||||||| ||| | ||||||||||||||||||| |||  ||||||||| | | ||||||||| | ||||||   ||| ||  |  |||     
T  34923091 ttgagcttataaaaaatagcttatgcaaataaataagcttttatgttagttcataagttctcactaacgaaaagtgtatcttcacaagctgttttttttt 34922992  T
Q  587 ataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgc 652  Q
    ||||||||  || |||| ||| ||||||| | |||||||| ||||||||| ||| |||| ||||||    
T  34922991 ataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagttgttttgc 34922926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 636
Target Start/End: Complemental strand, 35809251 - 35809101
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||| | ||| |  |||||| ||||||||||| |||| ||||||  | ||| |  |||||||| ||| ||  ||||||||  |||    
T  35809251 ggattgagcttatgaaaaagagcttatgtaaataattaagcttttatgttaattcataaaatcttactggcgaaaattgtatattcttaagttgtttttt 35809152  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    |||||||||  ||||||||||| | ||||| | || || || |||||||||    
T  35809151 cataaactacgttaacaagcttataaataatacattaatgcttatttattt 35809101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 623
Target Start/End: Original strand, 8180544 - 8180653
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||| |||||||||||| ||||||||||| | |||  || ||| ||| ||| ||||||    ||| ||||||||  ||||||||||| | |||    
T  8180544 caaataaataaacttttatattaattcataagttttcactaataaatattatatttttataagttaattttttataaactaccttaacaagcttataaat 8180643  T
Q  614 aaaaaataaa 623  Q
    || |||||||    
T  8180644 aataaataaa 8180653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 651
Target Start/End: Complemental strand, 43391880 - 43391717
Alignment:
Q  489 attgagcttatgaaaaatatctttac--aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttc 586  Q
    |||||| ||||||||||||  |||||  ||||||||||| ||||||||| | | ||||||||| |  ||| |||||| ||||||  ||| || |  ||||    
T  43391880 attgagtttatgaaaaatag-tttacgtaaataaataagtttttatatttatttataagttttcacaaacaaaaattatatcttcataaattattttttc 43391782  T
Q  587 ataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttg 651  Q
    ||||||||  ||||||| ||| ||||||| ||| | |||  ||||||||| ||| |||| |||||    
T  43391781 ataaactaccttaacaaacttatgaataataaacataagtttatttatttacataagttgttttg 43391717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 547
Target Start/End: Original strand, 43818803 - 43818864
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 547  Q
    ||||||||||||||||||| | ||| | |||||||||||| |||||| |||| |||||||||    
T  43818803 ggattgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagtt 43818864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 636
Target Start/End: Complemental strand, 20888732 - 20888584
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | ||||||| |||| |||||| |||| | ||||||||| |   | ||||||| ||||||  ||| ||||  ||||||    
T  20888732 ttgagcttatgaaaaataacttatgcaaataagtaagtttttatgttaatttataagttttcacggaagaaaattgtatcttcataaattgttttttcat 20888633  T
Q  589 aaactattttaacaagcttgtgaataaaaaat-aaaagcgtatttattt 636  Q
    ||||||  ||  ||||||| ||||||| | || |||||| |||||||||    
T  20888632 aaactacctttgcaagcttatgaataatacataaaaagcttatttattt 20888584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 618 - 662
Target Start/End: Original strand, 22515564 - 22515608
Alignment:
Q  618 aataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||||| ||||||||||||| |  ||||||||||||||||||    
T  22515564 aataaaagcttatttattttcataatatattttgcataagctcaa 22515608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 619 - 667
Target Start/End: Complemental strand, 44613444 - 44613396
Alignment:
Q  619 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||| ||||||||| ||| || |||||| ||||||||||||||||    
T  44613444 ataaaagcttatttatttgcataagctatttttcataagctcaatccaa 44613396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 487 - 667
Target Start/End: Complemental strand, 41229064 - 41228883
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| | ||||||||| |||||||||||||| ||||||||| | | ||| ||||||| ||||||  | ||||||  |||    
T  41229064 ggattgagcttatgaaaaatagcttatgcaaataaattagcttttatattaattcataagttctaactaatgaaaattgtatcttcatcagttgtttttt 41228965  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||||  ||||||||||| ||||||| |||||||||| ||||||  | ||| || | |||||||||||||||||||||    
T  41228964 cataaactaccttaacaagcttatgaataataaataaaagcctatttacctgcataagctgttttgcataagctcaatccaa 41228883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 43499300 - 43499402
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||| || ||||||||| |||| ||||||||    
T  43499300 ttttggcactcttgtaattgactcttttagctggggttttggcactccttgtgctgaaatctccaagctttcagtattttaatccattttagtttcttaa 43499399  T
Q  417 aaa 419  Q
    |||    
T  43499400 aaa 43499402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 316 - 419
Target Start/End: Complemental strand, 39059821 - 39059718
Alignment:
Q  316 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 415  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||| | ||||||||||| ||| ||| |||||| |||||||||||| |||| |||||||    
T  39059821 gttttgacattcttgtaattaactctttcagcttgggttttggcactgcttgtgctgaattcttcagactttcagtaatttaatccattttagtttctta 39059722  T
Q  416 aaaa 419  Q
    ||||    
T  39059721 aaaa 39059718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 493 - 667
Target Start/End: Original strand, 46704201 - 46704375
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | ||||||| |||  ||||||||||| ||||||||| | | ||| ||||||||||||||  |||| |||  |||||||||    
T  46704201 agcttatgaaaaataacttatgcaaataagtaactttttatattaattcataagttctcactaatgaaaattttatcttcataagctgttttttcataaa 46704300  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||  ||||||||||  ||||||| |||||||||| || |||||| ||| |||| |||| ||||||||||||||||    
T  46704301 ctaccttaacaagctcatgaataataaataaaagctta-ttatttgcataagttgttttacataagctcaatccaa 46704375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 626
Target Start/End: Original strand, 18630823 - 18630960
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | | ||||||||| ||||||||  |||| |||  ||||||    
T  18630823 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacgaaaactttatcttcataagctgttttttcat 18630922  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagc 626  Q
    ||||||  ||||||||||  || |||| ||||||||||    
T  18630923 aaactaccttaacaagctcatggataataaataaaagc 18630960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 36651837 - 36651736
Alignment:
Q  318 tttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaa 417  Q
    ||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||  |||||  || ||||||||| |||| ||||| |||    
T  36651837 tttggcactcttgtaactgactcttttagctggggttttggcactccttgtgctgaaatctccaaactttcgatattttaatccattttagtttctaaaa 36651738  T
Q  418 aa 419  Q
    ||    
T  36651737 aa 36651736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 662
Target Start/End: Complemental strand, 29877792 - 29877624
Alignment:
Q  495 cttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaact 593  Q
    ||||||||||||| ||| | |||||| |||||||||||| |||| ||||||||| | | |||| |||||| ||||||  |||| ||   |||||||||||    
T  29877792 cttatgaaaaatagcttatgcaaatatataagcttttatgttaattcataagttctcactaacaaaaattgtatcttcataagctgctttttcataaact 29877693  T
Q  594 attttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    |  ||| ||||||| ||||||| | |||||||| ||||||||| ||| | || ||||||||||||||||    
T  29877692 accttagcaagcttatgaataatacataaaagcttatttatttgcataaattgttttgcataagctcaa 29877624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 316 - 419
Target Start/End: Complemental strand, 9896606 - 9896503
Alignment:
Q  316 gttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctta 415  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||| |||| ||||  |||||| |||||| ||||| |||| ||||||     
T  9896606 gttttggcattcttgcaattgactttttcatctggggttttggcactccttgtgcttaaatttccaagctttcactaattttatccattttagtttcttc 9896507  T
Q  416 aaaa 419  Q
    ||||    
T  9896506 aaaa 9896503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 490 - 662
Target Start/End: Complemental strand, 23297593 - 23297423
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | |||||||||||||||||||  ||| ||||||||| |   |||| |||||| ||||||  |||| |||   |||||    
T  23297593 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatcttcataagctgt---ttcat 23297497  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||| ||| ||||||| | |||||||| ||||||||| ||| || ||||||||||||||||||    
T  23297496 aaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagctattttgcataagctcaa 23297423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 48591352 - 48591499
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | ||||||||||||||||||  |||| ||||||||| | ||||||||||||| ||||||  |||| |||  ||||||    
T  48591352 ttgagcttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttctcattaacgaaaattgtatcttcataagctgttttttcat 48591451  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  || |||||| | ||||||| | |||||| | |||||||||    
T  48591452 aaactaccttgacaagcgtatgaataatatataaaaacttatttattt 48591499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 334 - 419
Target Start/End: Complemental strand, 37870726 - 37870640
Alignment:
Q  334 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaattt-cttaaaaa 419  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||||| |||| ||| ||||||||    
T  37870726 ttgactctttcagctggggttttggcactccttgtgctgaaatctccagactttgagtaatataatccattttagtttacttaaaaa 37870640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 514 - 634
Target Start/End: Complemental strand, 36298465 - 36298344
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt-cataaactattttaacaagcttgtgaa 612  Q
    ||||||||||| |||||||||||| ||||||||||| |||||| |||| ||||||||  ||| ||||  ||| ||||||||||||||||||  || | ||    
T  36298465 caaataaataaacttttatattaattcataagttttcattaacaaaaaatttatcttcataaattgttttttccataaactattttaacaaagttataaa 36298366  T
Q  613 taaaaaataaaagcgtatttat 634  Q
    ||| |||||||||| |||||||    
T  36298365 taacaaataaaagcatatttat 36298344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 515 - 662
Target Start/End: Original strand, 18424232 - 18424378
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 614  Q
    |||||||||||||||||| |||| ||||||||||| | |||| |||||| ||||||  ||| ||||  ||||||||||||  || ||||| || ||||||    
T  18424232 aaataaataagcttttatgttaattcataagttttcaataacaaaaattgtatcttcataaattgt-ttttcataaactaccttcacaagtttatgaata 18424330  T
Q  615 aaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    | | |||||||| |||||||||  || | || ||||||||||||||||    
T  18424331 atacataaaagcttatttatttgtataaattgttttgcataagctcaa 18424378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 573 - 667
Target Start/End: Original strand, 212960 - 213053
Alignment:
Q  573 taagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    ||||||||  ||||||||||||  ||||||||||| ||||||| |||||||| | ||||||||| ||| |||| |||||||||||||||||||||    
T  212960 taagttgttttttcataaactaccttaacaagcttatgaataataaataaaa-cttatttatttgcataagttgttttgcataagctcaatccaa 213053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 2547975 - 2548122
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||| ||| | ||| | |||||||||||| ||||||||||| | ||||||| | |||| |||||||||||||||  ||| ||||  ||||||    
T  2547975 ttgagcttatgagaaagagcttatgcaaataaataagtttttatattaatttataagttctcattagcgaaaattttatcttcataaattgttttttcat 2548074  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  |||| | |||  ||||||| |||||||| | |||||||||    
T  2548075 aaactaacttaataggctcatgaataacaaataaaaacttatttattt 2548122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 624
Target Start/End: Complemental strand, 17222987 - 17222852
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | |||||||||||| |||||| |||| ||||||||| | | ||||||||||| ||||||  |||  |||  ||||||    
T  17222987 ttgagcttatgaaaaatagcttattcaaataaataagtttttatgttaattcataagttctaactaacgaaaattgtatcttcataatctgttttttcat 17222888  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaa 624  Q
    ||||||  || |||||||| ||||||| | ||||||    
T  17222887 aaactaccttgacaagcttatgaataatacataaaa 17222852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 636
Target Start/End: Complemental strand, 897103 - 896981
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||||||||||||||| | ||||||||| | ||||||||||  |||||   ||| ||||  ||||||||||||  || |||||||| |||||    
T  897103 caaataaataagcttttatattaatttataagttttcactaacgaaaatcgtatctacgtaaattgttttttcataaactacattgacaagcttatgaat 897004  T
Q  614 aaaaaataaaagcgtatttattt 636  Q
    || | |||||||  |||||||||    
T  897003 aatacataaaagtttatttattt 896981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 7743575 - 7743677
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    ||||| || |||||||||||||||||| ||||   ||||||||| ||||||||||||||||||||  |||||| |  ||||||||| |||| ||| ||||    
T  7743575 ttttgacactcttgtaattgactcttttagcttaagttttggcactccttgtgctgaaatctccatgctttcagttttttaatccattttagtttattaa 7743674  T
Q  417 aaa 419  Q
    |||    
T  7743675 aaa 7743677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 493 - 659
Target Start/End: Original strand, 42611799 - 42611966
Alignment:
Q  493 agcttatgaaaaatatcttta--caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 590  Q
    |||||||||||||||  ||||  ||||||||||||||||||| |||| ||||||||| | | | ||||||| | ||||||  ||||||||  ||||||||    
T  42611799 agcttatgaaaaatagatttatgcaaataaataagcttttatgttaattcataagttgtcact-acgaaaactgtatcttcataagttgttttttcataa 42611897  T
Q  591 actattttaacaagcttgtgaataaaaaata-aaagcgtatttattttcattagttattttgcataagct 659  Q
    ||||  |  |||||||| ||||||| | ||| ||||| ||||||||| ||| |||| |||||||||||||    
T  42611898 acta-ctcgacaagcttatgaataatacatataaagcttatttatttgcataagttgttttgcataagct 42611966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 553 - 662
Target Start/End: Original strand, 7206578 - 7206687
Alignment:
Q  553 taacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgc 652  Q
    ||||||||| ||||||||  ||||||||  ||||||||||||  |||||| ||| |||||||| |||||||||| |||| |||| ||| || | || |||    
T  7206578 taacgaaaactttatcttcataagttgttttttcataaactaccttaacaggctcgtgaataataaataaaagcttattcatttgcataagctgttctgc 7206677  T
Q  653 ataagctcaa 662  Q
    ||||||||||    
T  7206678 ataagctcaa 7206687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 667
Target Start/End: Original strand, 8057017 - 8057194
Alignment:
Q  491 tgagcttatgaaaaata-tctttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 589  Q
    |||||||||||||| || ||| | |||| ||||||| ||||||||||| | ||||||| | |  ||| || ||| ||||||  ||| | ||  |||| ||    
T  8057017 tgagcttatgaaaattagtctatccaaacaaataagtttttatattaatttataagttctcacgaacaaatattgtatcttcataaatcgttttttctta 8057116  T
Q  590 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    | |||  || |||||||| ||||||| |||||||| | ||||| ||| ||||||||||||| ||||||||||||||||    
T  8057117 agctaccttgacaagcttatgaataataaataaaaacttatttttttgcattagttatttttcataagctcaatccaa 8057194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 493 - 636
Target Start/End: Complemental strand, 36741059 - 36740915
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | ||||||||||||||||| | || | ||||||||| | | ||| ||||||| ||||||  | |  |||| |||||||||    
T  36741059 agcttatgaaaaatagcttatgcaaataaataagcttttgtgttgattcataagttctcactaatgaaaattgtatcttcatgaactgtattttcataaa 36740960  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||| ||| |||||||| || |||| | |||||||| |||||||||    
T  36740959 ctactttgacaagcttatgcataatatataaaagcttatttattt 36740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 662
Target Start/End: Original strand, 38345776 - 38345922
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 614  Q
    |||||||||||||||||| |||| ||||||||| |   |||  |||||| ||||||  ||||||||  |||||||||||| ||| |||| ||| ||||||    
T  38345776 aaataaataagcttttatgttaattcataagttctggctaataaaaattgtatcttcataagttgttttttcataaactactttgacaa-cttatgaata 38345874  T
Q  615 aaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
      | |||||||| |||||||||  || || | ||||||||||||||||    
T  38345875 ctacataaaagcttatttatttggataagctgttttgcataagctcaa 38345922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 636
Target Start/End: Complemental strand, 7148905 - 7148783
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||||||||||  ||| ||||||||| | | ||| ||||||| ||| ||| |||| |||  ||||| ||||||  || |||||||| |||||    
T  7148905 caaataaataagcttttatgctaattcataagttctgactaaagaaaattgtatttttataagctgttttttcaaaaactaccttgacaagcttatgaat 7148806  T
Q  614 aaaaaataaaagcgtatttattt 636  Q
    || | |||||||| |||||||||    
T  7148805 aatacataaaagcttatttattt 7148783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 23106842 - 23106768
Alignment:
Q  325 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaat 399  Q
    |||||||| ||||||||||||  ||||||||||||| ||||| ||||||||||||||  |||||| |||| ||||    
T  23106842 ttcttgtatttgactctttcaaatggggttttggcactccttatgctgaaatctccatactttcagtaatataat 23106768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 659
Target Start/End: Original strand, 12495572 - 12495744
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||| || ||| | |||||||||||| |||||| |||| | ||||||| | | ||| ||| ||| ||||||  | || |||  ||||||    
T  12495572 ttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcat 12495671  T
Q  589 aaacta--ttttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 659  Q
    ||||||  |||| |||||||| ||||||| | |||||||| ||||||||| ||| || | |||||| ||||||    
T  12495672 aaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataagctgttttgcttaagct 12495744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 667
Target Start/End: Complemental strand, 11298740 - 11298573
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||| ||| || |||||| | | ||||||||| ||||||||           | |||||    
T  11298740 ttgagcttatgaaaaatagcttatgcaaataaataaacttttataataattcttaagttctcactaacgaaaactttatctt-----------cattcat 11298652  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    ||||||  |||| |||||  ||||||| |||||||||| || ||| || ||| || | |||||||||||||||||||||    
T  11298651 aaactaccttaagaagctcatgaataataaataaaagcttaattacttgcataagctgttttgcataagctcaatccaa 11298573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 42718574 - 42718678
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttg-tgctgaaatctccagcctttcattaatttaatccagtttaattt-ctt 414  Q
    |||||||| |||| ||||| ||||||| ||| |||||||| ||| |||||| ||||||||||||||| |||||| |  ||||||||| |||| ||| |||    
T  42718574 ttttggcactcttataattaactcttttagccggggttttagcactccttggtgctgaaatctccaggctttcagttttttaatccattttagtttactt 42718673  T
Q  415 aaaaa 419  Q
    |||||    
T  42718674 aaaaa 42718678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 54898975 - 54898883
Alignment:
Q  327 cttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    ||||||||||||||||||||||| ||||||| || ||||| | || |||||||||  |||||| |||| || | || ||||| ||||||||||    
T  54898975 cttgtaattgactctttcagctgaggttttgacactccttatactaaaatctccaaactttcagtaatatatttcattttaacttcttaaaaa 54898883  T

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Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 636
Target Start/End: Original strand, 43983362 - 43983457
Alignment:
Q  541 ataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||| ||||||||||||||||| ||| ||| ||||||||  ||| ||||||||| ||||||||||| | ||||| | || || || |||||||||    
T  43983362 ataagattttattaacgaaaattgtatgtttataagttgtttttttataaactatcttaacaagcttataaataatacattaatgcttatttattt 43983457  T

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Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 512 - 570
Target Start/End: Complemental strand, 48721955 - 48721897
Alignment:
Q  512 tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||||||||||| ||||||||| | | |||| |||||| ||||||    
T  48721955 tacaaataaataagcttttatattaattcataagttctcactaacaaaaattatatctt 48721897  T

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Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 659
Target Start/End: Complemental strand, 948136 - 948060
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 659  Q
    ||||||||||||  || ||||  || ||||||| | |||||||| ||||||||||||| || |||||||||||||||    
T  948136 tttcataaactaccttgacaaagttatgaataatacataaaagcttatttattttcataagctattttgcataagct 948060  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 662
Target Start/End: Complemental strand, 3564284 - 3564205
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||||||||  || |||| ||| ||||||| | |||||||  ||||||||||||| || | ||||||||||||||||    
T  3564284 tttcataaactaccttgacaaacttatgaataatatataaaagtttatttattttcataagctgttttgcataagctcaa 3564205  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 563
Target Start/End: Complemental strand, 8130634 - 8130563
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    ||||||||||||||| ||| | |||||||||||| |||||| |||| ||||||||||| | |||| ||||||    
T  8130634 agcttatgaaaaatagcttgtgcaaataaataagtttttatgttaattcataagttttcactaacaaaaatt 8130563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 662
Target Start/End: Original strand, 43699505 - 43699584
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||||||||  || |||||||| ||||||| | |||||||| |||||||||  || |||| |||| |||||||||||    
T  43699505 tttcataaactacattgacaagcttatgaataagacataaaagcttatttatttgtataagttgtttttcataagctcaa 43699584  T

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Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 667
Target Start/End: Complemental strand, 46175953 - 46175902
Alignment:
Q  616 aaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||| || ||||||||| ||| ||||||||| ||||||||||||||||    
T  46175953 aaaataaatgcttatttatttacataagttatttttcataagctcaatccaa 46175902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 563
Target Start/End: Original strand, 14987528 - 14987602
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    ||||| |||||||||| | ||| || ||||||||||| ||||||||||| ||||||||| | | |||||||||||    
T  14987528 ttgagtttatgaaaaacagcttatataaataaataagtttttatattaattcataagttctcactaacgaaaatt 14987602  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 549
Target Start/End: Complemental strand, 30956839 - 30956782
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttt 549  Q
    ||||||||||||||| ||| | |||||||||||| ||||| ||||| |||||||||||    
T  30956839 agcttatgaaaaatagcttatgcaaataaataagtttttacattaattcataagtttt 30956782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 590
Target Start/End: Complemental strand, 31022558 - 31022457
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||| |||||||||| | ||| | ||||||||||||| ||||  |||| ||||||||||| | | ||||||||| ||||||| |||| |||  ||||||    
T  31022558 ttgagattatgaaaaacaacttatgcaaataaataagcatttaccttaattcataagttttcactgacgaaaattgtatctttataagctgttttttcat 31022459  T
Q  589 aa 590  Q
    ||    
T  31022458 aa 31022457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 593
Target Start/End: Complemental strand, 35405838 - 35405738
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| | || || | ||| ||||||||||| ||||||  |||| |||  |||||||||    
T  35405838 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattaat-aggtcttactaacgaaaattctatcttcataagctgttttttcataaa 35405740  T
Q  592 ct 593  Q
    ||    
T  35405739 ct 35405738  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 562
Target Start/End: Original strand, 42617158 - 42617231
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaat 562  Q
    |||||||||||||||||| ||| |  ||||||||||| |||||| |||| | ||||||||| | ||||||||||    
T  42617158 ttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagttttcactaacgaaaat 42617231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 570
Target Start/End: Complemental strand, 47202983 - 47202902
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| || |||||| ||||||||||| |||| | ||||| | | | ||||||||||| ||||||    
T  47202983 ttgagcttatgaaaaataacttatataaataagtaagcttttattttaatttataagatctcactaacgaaaattgtatctt 47202902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 22397258 - 22397338
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaacta 594  Q
    ||||||| ||||||||||  |||| ||||||| | ||| ||||||||||| ||| ||  ||||||||  ||||||||||||    
T  22397258 caaataattaagcttttaagttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacta 22397338  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 514 - 562
Target Start/End: Complemental strand, 24031213 - 24031165
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaat 562  Q
    |||||||| || |||||||||||| ||||||||| ||||||| ||||||    
T  24031213 caaataaaaaaacttttatattaattcataagttcttattaaagaaaat 24031165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 492 - 547
Target Start/End: Original strand, 34526267 - 34526323
Alignment:
Q  492 gagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 547  Q
    ||||||||||||||||  || | ||||||||||||||||||| |||| |||||||||    
T  34526267 gagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataagtt 34526323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 515 - 662
Target Start/End: Original strand, 43415242 - 43415390
Alignment:
Q  515 aaataaataagcttttatattaactcataagttttt-attaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||  |||||| |||| |||||||||||| | |||| || ||| ||||||  ||| ||||  |||| |||||||  ||||||| ||| |||||    
T  43415242 aaataaataaatttttatgttaattcataagtttttcactaacaaatattatatcttgataaattgttttttcgtaaactacattaacaaccttatgaat 43415341  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    || | |||||| | ||||||||| ||  |||| |||| | |||||||||    
T  43415342 aatacataaaaacttatttatttgcagaagttgttttacttaagctcaa 43415390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 46175904 - 46175988
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    ||||||||||||||||||||| ||| |  |||||||||||| ||||| |||| | ||||| | ||| || |||||||| ||||||    
T  46175904 ggattgagcttatgaaaaataacttatgtaaataaataagcatttattttaatttataagctcttactagcgaaaattgtatctt 46175988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 8e-32; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 487 - 667
Target Start/End: Original strand, 9572709 - 9572891
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | | |||| |||| ||||||||  ||| ||||  |||    
T  9572709 ggattgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacaaaaactttatcttcataaattgtttttt 9572808  T
Q  586 cataaactattttaacaagcttgtgaataaaaaat-aaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||||  ||||||| ||| ||||||| |||| |||||| ||||||||| ||  || | |||||||||||||||||||||    
T  9572809 cataaactaccttaacaaacttatgaataataaataaaaagcttatttatttgcaaaagctgttttgcataagctcaatccaa 9572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 33766359 - 33766461
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    ||||| || |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||| ||||||||    
T  33766359 ttttgacactcttgtaattgactcttttaactggggttttggcactccttgtgctgaaatctccagactttcagtattttaatccattttagtttcttaa 33766458  T
Q  417 aaa 419  Q
    |||    
T  33766459 aaa 33766461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 487 - 667
Target Start/End: Original strand, 46689475 - 46689656
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| | ||||||||||| || ||||||||| ||||||||| | | ||||||||||||||| ||  ||||||||  | |    
T  46689475 ggattgagcttatgaaaaataacttatgcaaataaataaactattatattaattcataagttctcactaacgaaaattttattttcataagttgttttat 46689574  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
     ||||| ||  ||||||||||  ||||||| |||||||||| | ||||||| ||| |  | |||||||||||||||||||||    
T  46689575 tataaaataccttaacaagctcatgaataataaataaaagcttttttatttgcataaactgttttgcataagctcaatccaa 46689656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 514 - 662
Target Start/End: Complemental strand, 46473227 - 46473079
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||  ||||||||  ||||||| ||||  |||| || ||  |||||    
T  46473227 caaataaataagattttatattaattcataagttcttattaacgaaaactttatcttcataagttgttttttcatatactaccttaaaaacctcatgaat 46473128  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    || |||||||||| ||||||||| ||  || | ||||||||||||||||    
T  46473127 aataaataaaagcttatttatttacacaagctgttttgcataagctcaa 46473079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 19227976 - 19227894
Alignment:
Q  325 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 407  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  19227976 ttcttgtatttgactctttcagctggggttttggcactccttgtgctgaaatctccaggctttcagtaatataatccatttta 19227894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 317 - 419
Target Start/End: Complemental strand, 51534575 - 51534473
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||  || ||||||||| |||| |||||| |    
T  51534575 ttttggcactcttgtaattgactcttttagcaggggttttggcactccttgtgctgaaatctccaggctttcggtattttaatccattttagtttcttta 51534476  T
Q  417 aaa 419  Q
    |||    
T  51534475 aaa 51534473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 662
Target Start/End: Complemental strand, 13039105 - 13038932
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||| ||||||||||||| ||| | ||||||||||| |||||||||||| |||||| || | | ||||||||| ||||||||  ||||||||  ||||||    
T  13039105 ttgaacttatgaaaaatagcttatgcaaataaataaacttttatattaattcataacttctcactaacgaaaactttatcttcataagttgttttttcat 13039006  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  ||||||||||  ||||||| | |||||||| ||||||||| ||| ||   |||||||||| |||||    
T  13039005 aaactaccttaacaagctcatgaataatatataaaagcttatttatttgcatcagccgttttgcataacctcaa 13038932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 326 - 414
Target Start/End: Complemental strand, 4532175 - 4532087
Alignment:
Q  326 tcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttctt 414  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||| ||||||    
T  4532175 tcttgtaattgactcttttacctggggttttggcactccttgtgctgaaatctccagactttcagtattttaatccattttagtttctt 4532087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 33936450 - 33936538
Alignment:
Q  331 taattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||| |||| ||||||| ||||| ||||||||||    
T  33936450 taattgactctttcagctgggattttggcactccttgtcctgaaatctccagactttcagtaatataatccattttaacttcttaaaaa 33936538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 490 - 636
Target Start/End: Complemental strand, 26988306 - 26988159
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||||||  || | ||||||||| ||||||||| |||| ||||||||||||| |||||| |||| ||||||  |||| |||  ||||||    
T  26988306 ttgagcttatgaaaaatagtttatgcaaataaattagcttttatgttaattcataagtttttactaacgacaattgtatcttcataagctgttttttcat 26988207  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  || |||||||| ||||||| | |||||||| |||||||||    
T  26988206 aaactaccttgacaagcttatgaataagacataaaagcttatttattt 26988159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 490 - 636
Target Start/End: Complemental strand, 28122776 - 28122627
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttt--tattaacgaaaattttatctttctaagttgtactttc 586  Q
    ||||||||||||||||||  || |  ||||||||||||||||||||||| ||| |||||||  || ||||||||||||||||||| |||||| |  ||||    
T  28122776 ttgagcttatgaaaaatagtttatgaaaataaataagcttttatattaattcagaagttttcttactaacgaaaattttatctttataagttattttttc 28122677  T
Q  587 ataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||||  |||| |||||  ||||||| ||||||||||  ||||||||    
T  28122676 ataaactaccttaagaagctcatgaataataaataaaagctaatttattt 28122627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 514 - 659
Target Start/End: Complemental strand, 4068248 - 4068103
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||| |||||||||||| ||||||||| | | ||||||||||  ||||||  ||||||||  ||||||||||||  || |||||||| |||||    
T  4068248 caaataaataaacttttatattaattcataagttctcactaacgaaaatagtatcttcataagttgttttttcataaactaccttgacaagcttatgaat 4068149  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagct 659  Q
    || | |||||||| ||||||||| ||  || ||||||||| |||||    
T  4068148 aatacataaaagcttatttatttgcacaagctattttgcaaaagct 4068103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 13182647 - 13182749
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||| |||||||||||||||||||| || ||||||||||||| ||||| | ||||||| ||||| |||||| || ||||||| | ||||||||||| |    
T  13182647 ttttggaattcttgtaattgactcttttagttggggttttggcactccttatactgaaatttccaggctttcagtattttaatctattttaatttcttca 13182746  T
Q  417 aaa 419  Q
    |||    
T  13182747 aaa 13182749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 34549383 - 34549456
Alignment:
Q  334 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 407  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  34549383 ttgactctttcagctggggttttggcactccttgtgctgaaatctccagacttttagtaatataatccatttta 34549456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 334 - 407
Target Start/End: Complemental strand, 45432454 - 45432381
Alignment:
Q  334 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 407  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  45432454 ttgactctttcagctggggttttggcactccttgtgctgaaatctccagacttttagtaatataatccatttta 45432381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 636
Target Start/End: Original strand, 36422906 - 36423056
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||| |||||||| |||| ||| | ||||||||||| |||||||||||  | |||| || | | |||||||| |||||||||  ||||||||   ||    
T  36422906 ggattgatcttatgaagaataacttatgcaaataaataaacttttatattattttataacttctcactaacgaaatttttatcttcataagttgtttatt 36423005  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    |||||||||  ||||||| ||| ||||||| |||||||||| |||||||||    
T  36423006 cataaactaccttaacaaacttatgaataataaataaaagcttatttattt 36423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 491 - 635
Target Start/End: Original strand, 15515276 - 15515421
Alignment:
Q  491 tgagcttatgaaaaatatctttac-aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 589  Q
    ||||||||||||||||| ||| |  ||||||||||||||| || |||| ||||||||| | | ||||||||||| ||||||  |||| | |  |||||||    
T  15515276 tgagcttatgaaaaatagcttaagtaaataaataagctttcatgttaattcataagttctcactaacgaaaattgtatcttcataagctcttttttcata 15515375  T
Q  590 aactattttaacaagcttgtgaataaaaaataaaagcgtatttatt 635  Q
    |||||  || |||||||| ||||||| | |||||||| ||||||||    
T  15515376 aactaccttgacaagcttatgaataatacataaaagcttatttatt 15515421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 614
Target Start/End: Complemental strand, 37712225 - 37712100
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||| |||||||| ||| | ||||||||||| ||||||| |||| ||||||||| ||| |||||||| || ||||||  ||||||||  ||||||    
T  37712225 ttgagcttacgaaaaatagcttatgcaaataaataaacttttatgttaattcataagttcttactaacgaaagttgtatcttcataagttgttttttcat 37712126  T
Q  589 aaactattttaacaagcttgtgaata 614  Q
    ||||||  || |||||||| ||||||    
T  37712125 aaactaccttgacaagcttatgaata 37712100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 653
Target Start/End: Original strand, 35282547 - 35282686
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||  |||||||||||| ||||||||||| | |||  |||||||||||||  ||||||||  ||||||||||||  |||||| | || | |||    
T  35282547 caaataaatagacttttatattaattcataagttttcactaattaaaattttatcttcataagttgttttttcataaactaccttaacatgtttataaat 35282646  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgca 653  Q
    || ||||||| || ||||||||| ||| || | |||||||    
T  35282647 aataaataaacgcttatttatttgcataagctgttttgca 35282686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 37329340 - 37329487
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| |||| | ||||||| | |  |||||||||| ||||||  |||| |||  ||||||    
T  37329340 ttgagcttatgaaaaataacttatgcaaataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatcttcataagctgttttttcat 37329439  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  || ||||| || ||||||| | ||||||||  ||||||||    
T  37329440 aaactaccttgacaagtttatgaataatacataaaagctcatttattt 37329487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 660
Target Start/End: Complemental strand, 51162402 - 51162256
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||| ||| ||||||| |||| | ||||| | ||||||||||||||| ||| ||  ||||||||  ||||||||||||  ||||||| ||||| |||    
T  51162402 caaataattaaacttttatgttaatttataagatcttattaacgaaaattgtatattcataagttgttttttcataaactaccttaacaaacttgtaaat 51162303  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagctc 660  Q
    || | || || || ||||||||| ||| || || |||||||||||||    
T  51162302 aatacattaatgcttatttatttgcataagctactttgcataagctc 51162256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 512 - 660
Target Start/End: Complemental strand, 12256741 - 12256594
Alignment:
Q  512 tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtga 611  Q
    |||||||||||||  |||||| |||| ||||||||| ||| ||||||||||| || |||  ||| ||||  ||||||||||||  | ||||| ||| | |    
T  12256741 tacaaataaataaatttttattttaattcataagttcttactaacgaaaattgtaccttcataaattgt-ttttcataaactacatcaacaatcttataa 12256643  T
Q  612 ataaaaaataaaagcgtatttattttcattagttattttgcataagctc 660  Q
    |||| | |||||||| || |||||| ||| |||| ||||||||||||||    
T  12256642 ataatatataaaagcataattatttacataagttgttttgcataagctc 12256594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 515 - 662
Target Start/End: Original strand, 26946058 - 26946206
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 614  Q
    ||||||| |||||||| || ||| ||| ||||| | | ||| ||||||| ||||||  ||||||||  ||||||||||||  ||||||||||| ||||||    
T  26946058 aaataaacaagcttttgtactaattcacaagttgtcactaaggaaaattgtatcttcataagttgttttttcataaactaccttaacaagcttatgaata 26946157  T
Q  615 aaaaat-aaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    | | || |||||| ||||||||| ||| ||   ||||||||||||||||    
T  26946158 acacataaaaagcttatttatttacataagccgttttgcataagctcaa 26946206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 493 - 636
Target Start/End: Complemental strand, 48819454 - 48819310
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||||| | | |||| |||| | ||||||  |||| |||  |||||||||    
T  48819454 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacaaaaaatgtatcttcataagctgttttttcataaa 48819355  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    |||  || |||||||| ||||||| | || |||||  ||||||||    
T  48819354 ctaccttgacaagcttatgaataatacattaaagctcatttattt 48819310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 493 - 659
Target Start/End: Complemental strand, 10365325 - 10365159
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | ||||| ||||||||||||| |||| | | ||||||||| ||||||||||| ||| ||  |  |||||  |||||||||    
T  10365325 agcttatgaaaaatagcttatgcaaatgaataagcttttatgttaatttaaaagtttttactaacgaaaattgtatattcatcggttgt-ttttcataaa 10365227  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 659  Q
    ||| ||| |||||||| | ||||| | |||||||  |||| |||| ||| | ||||||| ||||||||    
T  10365226 ctactttgacaagcttattaataatacataaaagtttattcatttgcataaattattttacataagct 10365159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 16888897 - 16889040
Alignment:
Q  490 ttgagcttatgaaaaatatctttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 589  Q
    ||||||||||||||||| | |   ||||||||||||||||||| |||| |||||| || | | ||| ||||||| ||||||  |||| |||  |||||||    
T  16888897 ttgagcttatgaaaaatttatg--caaataaataagcttttatgttaagtcataaattctcactaatgaaaattgtatcttcataagctgttttttcata 16888994  T
Q  590 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    |||||  || |||||||| ||||||| | |||||||| |||||||||    
T  16888995 aactacctt-acaagcttatgaataatacataaaagcttatttattt 16889040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 553 - 660
Target Start/End: Complemental strand, 49971345 - 49971238
Alignment:
Q  553 taacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgc 652  Q
    ||||||||||| ||||||  |||| |||  ||||||||||||  ||||||||||| | ||||| ||||||| |  ||||||||| ||| |||| ||||||    
T  49971345 taacgaaaattgtatcttcgtaagctgttttttcataaactacattaacaagcttataaataataaataaaggaatatttatttgcataagttgttttgc 49971246  T
Q  653 ataagctc 660  Q
    ||||||||    
T  49971245 ataagctc 49971238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 636
Target Start/End: Original strand, 6337709 - 6337831
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||| |||||||||||||| |||| ||||||||| |   |||| |||||| ||||||  |||| |||  ||||||||||||  || |||||||| |||||    
T  6337709 caaacaaataagcttttatgttaattcataagttctcgctaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaat 6337808  T
Q  614 aaaaaataaaagcgtatttattt 636  Q
    || | |||||||| |||||||||    
T  6337809 aatacataaaagcttatttattt 6337831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 563
Target Start/End: Original strand, 10849999 - 10850068
Alignment:
Q  495 cttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    ||||||||||||| ||| |||||||||||||||||| || |||| | ||||||||| |||||||||||||    
T  10849999 cttatgaaaaataacttatacaaataaataagctttcatgttaatttataagttttcattaacgaaaatt 10850068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 624
Target Start/End: Complemental strand, 12828257 - 12828145
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatc--tttctaagttgtactttcataaactattttaacaagcttgtga 611  Q
    |||||| |||| ||||||||||||   ||||||||| ||||||||||||||||||  ||| ||||||||  ||||||||||||  |||| ||  || |||    
T  12828257 caaatagataaacttttatattaatctataagttttcattaacgaaaattttatctttttataagttgttttttcataaactaccttaaaaattttatga 12828158  T
Q  612 ataaaaaataaaa 624  Q
    |||| ||||||||    
T  12828157 ataacaaataaaa 12828145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 667
Target Start/End: Complemental strand, 25485881 - 25485728
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||  ||||||||||| | |||| |||| | || |||||||||||||||  ||| ||||  ||||||||||||  |||| ||| |  |||||    
T  25485881 caaataaataaatttttatattaatttataaattttcactagcgaaaattttatcttcataaattgttttttcataaactaccttaataaggtcatgaat 25485782  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    || ||||||||   ||||||||| ||| || | ||||| ||||| |||||||||    
T  25485781 aacaaataaaaatttatttatttgcataagctcttttgtataagttcaatccaa 25485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 36259244 - 36259324
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaacta 594  Q
    |||||||||||||||||||||||| | |||||| || ||||||||||||| ||| ||| |||  |||  ||||||||||||    
T  36259244 caaataaataagcttttatattaatttataagtcttcattaacgaaaattgtatgtttataaactgttttttcataaacta 36259324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 532
Target Start/End: Original strand, 1565303 - 1565345
Alignment:
Q  490 ttgagcttatgaaaaatatctttacaaataaataagcttttat 532  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  1565303 ttgagcttatgaaaaatagctttgcaaataaataagcttttat 1565345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 656
Target Start/End: Original strand, 35897547 - 35897718
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttc-- 586  Q
    |||| ||||||||||||| ||| |  |||||||||| ||||||| |||| | |||| |||| | ||| ||||||| |||| || |||||| |  ||||      
T  35897547 ttgaacttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataaattttcactaatgaaaattgtatcgttataagtttttttttcct 35897646  T
Q  587 --ataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataa 656  Q
      |||||||| ||| | |||||| ||||||| |||||||| | ||||||||| ||| |||| ||||||||||    
T  35897647 tcataaactactttgaaaagcttatgaataataaataaaaacttatttatttgcataagttgttttgcataa 35897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Complemental strand, 15791541 - 15791460
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| |||| | ||||| | | ||||||||||||| ||||||    
T  15791541 ttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataagctctcattaacgaaaattgtatctt 15791460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 650
Target Start/End: Complemental strand, 26543106 - 26542970
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttct-aagttgtactttcataaactattttaacaagcttgtgaa 612  Q
    |||||||||||  ||| || |||||| ||||||||| | ||||||||||| || |||||| |||||||  ||||||||||||  ||||||| ||| |  |    
T  26543106 caaataaataaattttaatcttaacttataagttttcactaacgaaaattgta-ctttcttaagttgttttttcataaactacattaacaaacttatata 26543008  T
Q  613 taaaaaataaaagcgtatttattttcattagttatttt 650  Q
    ||| | |||||||| ||||||||| ||| |||| ||||    
T  26543007 taatacataaaagcatatttatttgcataagttgtttt 26542970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 3069809 - 3069929
Alignment:
Q  516 aataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataa 615  Q
    ||||||||||||||||| |||| ||||||||| | | ||  ||||||| ||||||  |||| |||  ||||||||||||  || |||||||| |||||||    
T  3069809 aataaataagcttttatgttaattcataagttctcactagtgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataa 3069908  T
Q  616 aaaataaaagcgtatttattt 636  Q
     | || ||||| || ||||||    
T  3069909 tacattaaagcttacttattt 3069929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 19395935 - 19395851
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    ||||||||||||||||||||| ||| || | ||||||||| |||||| |||| | ||||| ||| | ||||||||||| ||||||    
T  19395935 ggattgagcttatgaaaaatagcttatatatataaataagtttttattttaatttataagctttcactaacgaaaattgtatctt 19395851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 570
Target Start/End: Complemental strand, 50919620 - 50919564
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||| || |||| | || |||||||||||||||||||| ||||||    
T  50919620 caaataaataagctttcatgttaatttattagtttttattaacgaaaattgtatctt 50919564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 624
Target Start/End: Original strand, 41196638 - 41196773
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||| |||||| ||| | ||||||||||||| ||||| |||| ||| ||| | | | |||| |||||| ||||||  |||| |||  ||||||    
T  41196638 ttgagcttatgtaaaatagcttatgcaaataaataagcctttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcat 41196737  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaa 624  Q
    ||||||  || |||||||| ||||||| | ||||||    
T  41196738 aaactacattgacaagcttatgaataatacataaaa 41196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 5347312 - 5347238
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    |||||||||||||||||| ||| |  |||||||||||||||||| ||||   ||||||| | |||||||||||||    
T  5347312 ttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgattaacgaaaatt 5347238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 547
Target Start/End: Complemental strand, 10082385 - 10082351
Alignment:
Q  513 acaaataaataagcttttatattaactcataagtt 547  Q
    ||||||||||||||||||||||||| |||||||||    
T  10082385 acaaataaataagcttttatattaattcataagtt 10082351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 3115990 - 3116071
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  |||||| ||||||||||| |||| | ||||| | ||| ||||||||||| ||||||    
T  3115990 ttgagcttatgaaaaataacttatgtaaataagtaagcttttattttaatttataagatcttactaacgaaaattgtatctt 3116071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 20505672 - 20505757
Alignment:
Q  341 tttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaataaacaa 426  Q
    ||||||||||| |||| ||| | ||||||||||||| | ||| | |||| |||| || |||| ||||| |||||||||| ||||||    
T  20505672 tttcagctgggtttttagcacttcttgtgctgaaatattcaggcgttcagtaatatattccattttaacttcttaaaaaaaaacaa 20505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 419
Target Start/End: Complemental strand, 33676568 - 33676491
Alignment:
Q  342 ttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    |||||||||| |||| ||| ||||||||||||||||| |||   |||| |||| || |||| ||||| ||||||||||    
T  33676568 ttcagctgggtttttagcactccttgtgctgaaatcttcaggtgttcaataatatattccattttaacttcttaaaaa 33676491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 619 - 667
Target Start/End: Complemental strand, 9572755 - 9572707
Alignment:
Q  619 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||| ||||||||| ||| || |||||| ||||||||||||||||    
T  9572755 ataaaagcttatttatttgcataagctatttttcataagctcaatccaa 9572707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 514 - 662
Target Start/End: Complemental strand, 20169397 - 20169249
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||| |||||| |||| |  |||||| | ||| ||| ||||| ||| ||| |||  |||  ||||||||||||| || | || ||| | |||    
T  20169397 caaataaataagtttttatgttaatttttaagttctcattgacggaaattgtatatttataaactgttttttcataaactatatttaaaaacttataaat 20169298  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    || | |||||||| ||||||||| ||| || | |||| |||||||||||    
T  20169297 aatacataaaagcttatttatttgcataagctgtttttcataagctcaa 20169249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 537
Target Start/End: Complemental strand, 28690162 - 28690114
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaa 537  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  28690162 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaa 28690114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 42591543 - 42591459
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    ||||||||||||||||||||| ||| |  ||||||||||| |||||| |||| | ||||| ||| | ||||||||| | ||||||    
T  42591543 ggattgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctttcactaacgaaaagtgtatctt 42591459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 537
Target Start/End: Complemental strand, 47413530 - 47413482
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaa 537  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  47413530 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaa 47413482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 8e-29; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 487 - 655
Target Start/End: Original strand, 32901073 - 32901242
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| | |||||||||| | |||||||||||   ||||||| | | ||||||||||||||||||  ||||||||  | |    
T  32901073 ggattgagcttatgaaaaatagcttatgcaaataaatatgtttttatattaaaatataagttctcactaacgaaaattttatcttcataagttgttttct 32901172  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcata 655  Q
     ||||||||| |||||||  |||||||||| |||||||||| ||||||||| ||| |||| |||||||||    
T  32901173 tataaactatcttaacaaatttgtgaataataaataaaagcttatttatttacataagttgttttgcata 32901242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 43971775 - 43971922
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | |||||||||| | ||||| |||||   ||||||| | | ||||||||||||||||||  ||| ||||  | ||||    
T  43971775 ttgagcttatgaaaaataacttatgcaaataaatatgtttttaaattaaaatataagttctcactaacgaaaattttatcttcataaattgttttctcat 43971874  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  43971875 aaactattttaacaaacttgtgaataataaataaaagcttatttattt 43971922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 490 - 667
Target Start/End: Original strand, 3876191 - 3876369
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | |||||||||||| ||||||||||| |||||||||   | |||| |||| |||| |||  ||||||||  ||||||    
T  3876191 ttgagcttatgaaaaatagcttatgcaaataaataagtttttatattaattcataagttagaactaacaaaaactttaccttcttaagttgttttttcat 3876290  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    ||||||  ||||| || || ||||||| ||||||||||  |||||||| ||| || | ||||| |||||||||||||||    
T  3876291 aaactaccttaactagattatgaataataaataaaagctaatttatttacataagctgttttgtataagctcaatccaa 3876369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 487 - 662
Target Start/End: Original strand, 33946475 - 33946643
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| | ||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||   |||||||   |||    
T  33946475 ggattgagcttatgaaaaatagcttatgcaaataaatgagcttttatattaattcataagttctcattaacgaaaattttatctacataagttggttttt 33946574  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    |||||| ||  |||||         ||||| |||||||||| ||||||||| ||| || ||||||||||||||||||    
T  33946575 cataaattaccttaac--------taataataaataaaagcttatttatttgcataagctattttgcataagctcaa 33946643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 494 - 662
Target Start/End: Original strand, 34707645 - 34707814
Alignment:
Q  494 gcttatgaaaaatatcttta-caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaac 592  Q
    |||||||||||||| ||| | |||||||||||| |||||| |||| || |||||| |   ||||||||||| ||||||  | || |||  ||||||||||    
T  34707645 gcttatgaaaaataacttaagcaaataaataagtttttatgttaattcgtaagttctcgctaacgaaaattgtatcttcgttagctgttttttcataaac 34707744  T
Q  593 tattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||  ||||||||||| ||||||| | |||||||| ||| ||||| | | |||| ||||||||||||||||    
T  34707745 taccttaacaagcttatgaataatacataaaagcttatatatttacgtaagttgttttgcataagctcaa 34707814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 492 - 636
Target Start/End: Original strand, 43079864 - 43080009
Alignment:
Q  492 gagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 590  Q
    |||||||||||||||| ||| | ||||||||||||||||||  |||| ||||||||| | | | ||||||||| ||||||  |||| |||  ||||||||    
T  43079864 gagcttatgaaaaatagcttattcaaataaataagcttttaagttaattcataagttctcaatcacgaaaattgtatcttcataagctgttttttcataa 43079963  T
Q  591 actattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||  || |||||||| ||||||| | |||||||| |||||||||    
T  43079964 actaccttgacaagcttatgaataacacataaaagcttatttattt 43080009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 662
Target Start/End: Complemental strand, 51409550 - 51409378
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||| ||||||||| || ||| |||||||||||||| ||||||||||| |||||| |||| | ||  | ||||||||||||  ||||||||  ||||||    
T  51409550 ttgagattatgaaaagtagcttatacaaataaataag-ttttatattaattcataatttttcagtattggaaattttatcttcataagttgttttttcat 51409452  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||| ||  ||||||| |||||||||  ||||||||| ||| || |||||| |||||||||||    
T  51409451 aaactaccttgacaaactcatgaataataaataaaagattatttatttgcataagctattttccataagctcaa 51409378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 40240505 - 40240652
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| |||| ||||||| | | | ||||||||||| ||||||  ||||||||  ||||||    
T  40240505 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatcttaattcataagctctcactaacgaaaattgtatcttcataagttgttttttcat 40240604  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||  |  ||| |||| ||||||| | |||||||| | |||||||    
T  40240605 aaactacctagacacgcttatgaataatacataaaagcttctttattt 40240652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 490 - 662
Target Start/End: Original strand, 22809121 - 22809295
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||| | | ||| | |||||||||||| |||||| |||| ||||||||| || |||||||||||| ||||||  ||||  ||  ||||||    
T  22809121 ttgagcttatgaaataaagcttgtgcaaataaataagtttttatgttaattcataagttcttcttaacgaaaattgtatcttcataagcagttttttcat 22809220  T
Q  589 aaactattttaacaagcttgtgaataaaaaat-aaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||||||| ||||||| | || |||||| ||||||||| ||| || | |||||||||| |||||    
T  22809221 aaactaccttgacaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgcataacctcaa 22809295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 498 - 662
Target Start/End: Original strand, 40581012 - 40581178
Alignment:
Q  498 atgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt-cataaactat 595  Q
    |||||||||||||| | |||||||||||| |||||| |||| ||||||||| | | ||||||||||| | ||||  || | |||  ||| |||||||||     
T  40581012 atgaaaaatatcttatgcaaataaataagattttatgttaattcataagttctcactaacgaaaattgtttcttcatacgctgtttttttcataaactac 40581111  T
Q  596 tttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
     || |||||||| | ||||| | |||||||| ||||||||| ||| |||| ||||||||||||||||    
T  40581112 cttgacaagcttattaataatacataaaagcttatttatttgcataagttgttttgcataagctcaa 40581178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 519 - 659
Target Start/End: Original strand, 53217998 - 53218138
Alignment:
Q  519 aaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaa 618  Q
    |||||||||||||| |||| | ||||||| | | ||||||||||| ||||||   |||||||  ||||||||||||  || |||||||| ||||||| |     
T  53217998 aaataagcttttattttaatttataagttctcactaacgaaaattgtatcttcaaaagttgttttttcataaactaccttgacaagcttatgaataatac 53218097  T
Q  619 ataaaagcgtatttattttcattagttattttgcataagct 659  Q
    |||||| | ||||||||  ||| |||| |||||||||||||    
T  53218098 ataaaatcttatttattcgcataagttgttttgcataagct 53218138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 487 - 571
Target Start/End: Complemental strand, 36266392 - 36266307
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatcttt 571  Q
    |||||||||||||||||||||  || | |||||||||||| |||||| |||| | ||||||||||||||||||||||  |||||||    
T  36266392 ggattgagcttatgaaaaataatttatgcaaataaataagtttttattttaatttataagtttttattaacgaaaatcatatcttt 36266307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 636
Target Start/End: Complemental strand, 585177 - 585031
Alignment:
Q  490 ttgagcttatgaaaaatatctttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 589  Q
    ||||||||||||||||||  | | ||||| ||||||||| ||| |||| || ||||||   | ||||||||||| ||||||  ||||||||  |||||||    
T  585177 ttgagcttatgaaaaatagttattcaaatcaataagcttatatgttaattcttaagttcaaactaacgaaaattgtatcttcataagttgttttttcata 585078  T
Q  590 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    |||||  | || |||||| |||||||   |||||||| |||||||||    
T  585077 aactacctcaagaagcttttgaataatgcataaaagcttatttattt 585031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 563
Target Start/End: Complemental strand, 38524249 - 38524172
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    ||||||||||||||||||| | ||| | ||||||||||||||||||| |||| ||||||| | ||| |||||||||||    
T  38524249 ggattgagcttatgaaaaagagcttatgcaaataaataagcttttatgttaattcataagatcttactaacgaaaatt 38524172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 419
Target Start/End: Complemental strand, 50642457 - 50642380
Alignment:
Q  342 ttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    |||||||||||||| |||| ||||| |||||||||||||||  ||||| |||| |||| || ||||| ||||||||||    
T  50642457 ttcagctggggtttcggcactccttatgctgaaatctccaggttttcagtaatataattcattttaacttcttaaaaa 50642380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 662
Target Start/End: Complemental strand, 29270457 - 29270346
Alignment:
Q  551 attaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttatttt 650  Q
    ||||||||||||| ||||||  |||| |||  ||||||||| ||| || | |||||| ||||||| | |||||||| ||||||||   || |||| ||||    
T  29270457 attaacgaaaattgtatcttcataagctgttttttcataaattatcttgaaaagcttatgaataatacataaaagcttatttattcctataagttgtttt 29270358  T
Q  651 gcataagctcaa 662  Q
    ||||||||||||    
T  29270357 gcataagctcaa 29270346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 570
Target Start/End: Complemental strand, 25341429 - 25341347
Alignment:
Q  489 attgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    ||||||||||||||||| | ||| |  ||||||||||| ||||||||||| ||| |||||||   ||||||||||||||||||    
T  25341429 attgagcttatgaaaaagagcttatgtaaataaataagtttttatattaattcacaagttttccctaacgaaaattttatctt 25341347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 636
Target Start/End: Original strand, 42956132 - 42956254
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||| |||||| |||| | ||||||| | | ||||||||||| ||||||| |||| |||  | |||||||||| ||  ||||| || |||||    
T  42956132 caaataaataagtttttatgttaatttataagttctcactaacgaaaattgtatctttataagctgttttatcataaactacttcgacaagtttatgaat 42956231  T
Q  614 aaaaaataaaagcgtatttattt 636  Q
    || | |||||| | |||||||||    
T  42956232 aatacataaaaacttatttattt 42956254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 636
Target Start/End: Original strand, 45331248 - 45331370
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||| ||||||| |||| ||||| ||| ||  || |||||||| ||||||  |||| |||  ||||||||||| | ||||||||||| || ||    
T  45331248 caaataaataaacttttatgttaattcatatgttcttgctagcgaaaattgtatcttcataagatgttttttcataaactgtcttaacaagcttatgcat 45331347  T
Q  614 aaaaaataaaagcgtatttattt 636  Q
    || | |||||||  |||||||||    
T  45331348 aatacataaaaggttatttattt 45331370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 4974472 - 4974407
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagttttta 551  Q
    ||||||||||||||||||| | ||| | ||||||||||||||||||| |||| ||||||| |||||    
T  4974472 ggattgagcttatgaaaaagagcttatgcaaataaataagcttttatgttaattcataagatttta 4974407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 660
Target Start/End: Complemental strand, 10448838 - 10448761
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 660  Q
    ||||||||||||  ||||||||||| | ||||| | ||||| || ||||||||| ||| |||| ||||||||||||||    
T  10448838 tttcataaactacattaacaagcttataaataatacataaaggcatatttatttgcataagttgttttgcataagctc 10448761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 17752059 - 17752140
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  |||||||||| ||||||| |||| | ||||||| ||| ||||||||||| ||||||    
T  17752059 ttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatctt 17752140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 19053379 - 19053460
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| |  |||||||||| ||||||| |||| | ||||||| ||| ||||||||||| ||||||    
T  19053379 ttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatctt 19053460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 594
Target Start/End: Original strand, 20174868 - 20174973
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||| |||||||||| | ||| | |||||||||||||||||||  ||| ||||||| | ||| ||||||||||| ||| ||  ||||||||  ||||||    
T  20174868 ttgaggttatgaaaaagagcttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcataagttgttttttcat 20174967  T
Q  589 aaacta 594  Q
    ||||||    
T  20174968 aaacta 20174973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 563
Target Start/End: Complemental strand, 43376856 - 43376779
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    ||||||||||||||||||| | ||| | ||| |||||||| ||||||||||| ||||||||||| |||  ||||||||    
T  43376856 ggattgagcttatgaaaaagagcttatgcaactaaataagtttttatattaattcataagttttcatttgcgaaaatt 43376779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 27769782 - 27769736
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaa 560  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  27769782 caaataaataagcttttatgttaatttataagttttcattaacgaaa 27769736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 594
Target Start/End: Original strand, 48597794 - 48597900
Alignment:
Q  490 ttgagcttatgaaaaata-tctttacaaataaataagcttttatattaactca-taagtttttattaacgaaaattttatctttctaagttgtactttca 587  Q
    ||||||||| |||||||| | ||| ||||||||||||||||||| |||| ||| |||||| | | | ||||||||| ||||||  ||||||||  |||||    
T  48597794 ttgagcttacgaaaaatagtgtttgcaaataaataagcttttatgttaattcattaagttctcactgacgaaaattgtatcttcataagttgttttttca 48597893  T
Q  588 taaacta 594  Q
    || ||||    
T  48597894 tacacta 48597900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 607
Target Start/End: Original strand, 53787705 - 53787798
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagctt 607  Q
    |||||||||||| |||||| |||| ||||||||| | | |||| |||||| ||||||| |||  |||  |||| |||||||| |||| ||||||    
T  53787705 caaataaataagtttttatcttaattcataagttctcaataacaaaaattatatctttataaactgttttttcgtaaactatattaaaaagctt 53787798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 632
Target Start/End: Original strand, 3870189 - 3870297
Alignment:
Q  524 agcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaa 623  Q
    ||||||||| |||| ||||||||| | ||||| ||||| | |||| |  || |||||  ||||||||||||  || |||||||| |||| |||| |||||    
T  3870189 agcttttatgttaattcataagttctcattaatgaaaagtgtatcatcatatgttgttttttcataaactaccttgacaagcttatgaacaaaacataaa 3870288  T
Q  624 agcgtattt 632  Q
    ||| |||||    
T  3870289 agcttattt 3870297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 561
Target Start/End: Complemental strand, 31787680 - 31787608
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaa 561  Q
    ||||||||||||||||||  || | ||||||||||| | |||||||||| ||||||||| |  ||||||||||    
T  31787680 ttgagcttatgaaaaatagtttatgcaaataaataaacgtttatattaattcataagttctctttaacgaaaa 31787608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 563
Target Start/End: Original strand, 52895333 - 52895407
Alignment:
Q  490 ttgagcttatgaaaaatatcttta--caaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    ||||||||||||||||| | ||||  ||||||||||||||||||| |||| |||||| || | | |||||||||||    
T  52895333 ttgagcttatgaaaaat-tgtttaggcaaataaataagcttttatgttaattcataaattctcactaacgaaaatt 52895407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 8e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 493 - 667
Target Start/End: Complemental strand, 6758783 - 6758607
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagctttt-atattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 590  Q
    ||||| ||||||||| ||| | ||||||||||||||||| ||||||| ||||||||| | | |||||||| || ||||||  ||||||    ||||||||    
T  6758783 agcttctgaaaaatagcttatgcaaataaataagctttttatattaattcataagttctcactaacgaaatttgtatcttgataagttaatttttcataa 6758684  T
Q  591 actattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    ||||  ||||||||||| || |||| ||| |||||| ||||||||| ||| |||| |||||||||||||||||||||    
T  6758683 actaccttaacaagcttatggataataaacaaaagcttatttatttgcataagttgttttgcataagctcaatccaa 6758607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 487 - 662
Target Start/End: Complemental strand, 23239408 - 23239232
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| | | ||| |||| || |||| |  ||| |||   |||    
T  23239408 ggattgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaaggaaagttgtatcgtcataatttgcttttt 23239309  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
     |||||| |  ||||||||||| ||||||| |||||||||| |||||||||  || ||||||||| |||||||||||    
T  23239308 gataaaccacgttaacaagcttatgaataataaataaaagcttatttatttgtataagttatttttcataagctcaa 23239232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 490 - 664
Target Start/End: Original strand, 29623406 - 29623580
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||| |||||||||||| ||| | |||||||||||| ||| || |||| ||||||||| | | ||||||||| ||||| ||  ||||||||  ||||||    
T  29623406 ttgagtttatgaaaaatagcttatgcaaataaataagattt-atgttaattcataagttctcactaacgaaaactttattttcataagttgttttttcat 29623504  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatc 664  Q
    ||||||  ||||||| ||  | ||||| |||||||||  ||||||||| ||| |||| ||||||||||||||||||    
T  29623505 aaactacattaacaaactcataaataataaataaaaggttatttatttgcataagttgttttgcataagctcaatc 29623580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 491 - 645
Target Start/End: Original strand, 32675818 - 32675973
Alignment:
Q  491 tgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcata 589  Q
    ||||||||||||||||| ||| | |||||||||||| ||||||||||| ||||||||| | | ||| ||||||| ||||||  |||||| |  |||||||    
T  32675818 tgagcttatgaaaaataacttatgcaaataaataagtttttatattaattcataagttctcactaatgaaaattgtatcttcataagttattttttcata 32675917  T
Q  590 aactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagtt 645  Q
    ||| |  |||  |||||| ||||||| |||||||||| ||||||||| ||| ||||    
T  32675918 aacaaccttacgaagcttatgaataataaataaaagcttatttatttgcataagtt 32675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 667
Target Start/End: Original strand, 2040107 - 2040292
Alignment:
Q  488 gattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt- 585  Q
    ||||||||| |||||||||| ||| | |||||||||||| ||||||||||| | ||||||| | | ||| ||||||| || |||| ||| ||||  |||     
T  2040107 gattgagctcatgaaaaataacttatgcaaataaataagtttttatattaatttataagttctaactaatgaaaattgtaactttataaattgttttttt 2040206  T
Q  586 ----cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
        |||||| ||  ||||||| ||| ||||||| |||||||||| |||||||||  || |||| |||||||||||||||||||||    
T  2040207 tcttcataaattaccttaacaaacttatgaataataaataaaagcttatttatttatataagttgttttgcataagctcaatccaa 2040292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 494 - 662
Target Start/End: Original strand, 21891270 - 21891439
Alignment:
Q  494 gcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaac 592  Q
    |||||||||||||| ||| | | ||| ||||||||||||| |||| ||||||||| ||   |||||||||| ||||||  ||||||||  ||||||||||    
T  21891270 gcttatgaaaaatagcttatgcgaatgaataagcttttatgttaattcataagttcttgcgaacgaaaattctatcttcataagttgttatttcataaac 21891369  T
Q  593 tattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||  || |||||||| ||||||| | || ||| | ||||||||| ||| || |||| |||||||||||||    
T  21891370 tacattgacaagcttatgaataatatatcaaaacttatttatttgcataagctattctgcataagctcaa 21891439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 662
Target Start/End: Original strand, 3829885 - 3830020
Alignment:
Q  527 ttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagc 626  Q
    |||||| |||| ||||||||| |||||||| |||||||||||||  ||||||||  ||||||||||||   ||| ||  || ||||||| ||||||||||    
T  3829885 ttttatgttaattcataagttcttattaacaaaaattttatcttcataagttgttttttcataaactaccataaaaactttatgaataacaaataaaagc 3829984  T
Q  627 gtatttattttcattagttattttgcataagctcaa 662  Q
    |||||||||| ||| ||   |||| |||||||||||    
T  3829985 gtatttatttgcataagccgtttttcataagctcaa 3830020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 325 - 419
Target Start/End: Complemental strand, 18972703 - 18972609
Alignment:
Q  325 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    |||||||||||| |||||||||||  |||||||||| |||||||||||||||||| || |||| | |||| ||||| | ||||| ||||||||||    
T  18972703 ttcttgtaattgtctctttcagctaaggttttggcactccttgtgctgaaatctcaaggcttttagtaatataatcaattttaacttcttaaaaa 18972609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 492 - 636
Target Start/End: Original strand, 2034159 - 2034304
Alignment:
Q  492 gagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 590  Q
    |||||||||| ||||| ||| | ||||||||||||||||||| || | ||||||||| ||| | ||||||||| ||||||  ||||||||  ||||||||    
T  2034159 gagcttatgataaatagcttatgcaaataaataagcttttatgttgaatcataagttattacttacgaaaattgtatcttggtaagttgttttttcataa 2034258  T
Q  591 actattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||  || |||| ||| | ||||| | |||||||| |||||||||    
T  2034259 actaccttgacaaacttataaataatacataaaagcttatttattt 2034304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 24393921 - 24393996
Alignment:
Q  325 ttcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatc 400  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||| || |||| | |||| |||||    
T  24393921 ttcttgtaattgactctttcagctaaggttttggcactccttgtgctgaaatctcaaggcttttagtaatataatc 24393996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 514 - 662
Target Start/End: Complemental strand, 10874117 - 10873971
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||||||||||| |||| ||||||||||| |  ||| |||||| ||||||  |||| |||  | ||||||||||  ||||||||||| | |||    
T  10874117 caaataaataagcttttatgttaattcataagttttcaccaactaaaattgtatcttcataagctgttttctcataaactaccttaacaagcttattaat 10874018  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
      || |||||||| ||||||| | ||| || |||||||||||| |||||    
T  10874017 --aatataaaagcttatttatatgcataagctattttgcataatctcaa 10873971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 407
Target Start/End: Complemental strand, 12912328 - 12912255
Alignment:
Q  334 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 407  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  12912328 ttgactctttcatctggggttttgacactccttgtgctgaaatctccagacttttagtaatataatccatttta 12912255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 515 - 663
Target Start/End: Complemental strand, 2255866 - 2255718
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 614  Q
    |||||||||||||||||| |||| ||||| ||| | | || | |||||| ||||||  |||| |||  ||||||||| ||  ||||||||||| |||||     
T  2255866 aaataaataagcttttatgttaattcatatgttctcactaccaaaaattgtatcttcataagctgttttttcataaattaccttaacaagcttatgaatc 2255767  T
Q  615 aaaaataaaagcgtatttattttcattagttattttgcataagctcaat 663  Q
    | | ||||||||  |||||||| ||| |||  |||||||||||||||||    
T  2255766 atacataaaagctcatttatttgcataagtcgttttgcataagctcaat 2255718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 487 - 594
Target Start/End: Original strand, 10184255 - 10184363
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||| |||| | ||||| | ||| ||||||||||| | ||||  ||| ||||  |||    
T  10184255 ggattgagcttatgaaaaatagcttatataaataaataagcttttattttaatttataagctcttactaacgaaaattgtttcttcataaattgtttttt 10184354  T
Q  586 cataaacta 594  Q
    |||||||||    
T  10184355 cataaacta 10184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 334 - 413
Target Start/End: Original strand, 165531 - 165610
Alignment:
Q  334 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttct 413  Q
    |||||||||||||||||||||||| || | |||||||||||||||| || |||| | |||| ||||||| |||| |||||    
T  165531 ttgactctttcagctggggttttgacacttcttgtgctgaaatctcaagacttttaataatataatccattttagtttct 165610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 544
Target Start/End: Complemental strand, 6752972 - 6752915
Alignment:
Q  488 gattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataa 544  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||    
T  6752972 gattgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataa 6752915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 636
Target Start/End: Original strand, 2027107 - 2027251
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | |||||| |||| ||||||| |||| ||||||||| ||| |||| ||| || ||||||  |||| |||  |||||||||    
T  2027107 agcttatgaaaaatagcttatgcaaatagataaacttttatgttaattcataagttcttactaacaaaagttgtatcttcataagctgttttttcataaa 2027206  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    || | || |||| ||| |||||||   |||||||| |||||||||    
T  2027207 ctgtcttgacaaacttctgaataatgcataaaagcttatttattt 2027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 512 - 615
Target Start/End: Original strand, 7576812 - 7576915
Alignment:
Q  512 tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtga 611  Q
    |||||||||||||| |||||| |||| | ||||||| |||| |||||||||| ||||||  |||  |||  ||| ||||| ||| ||||||||||| |||    
T  7576812 tacaaataaataagtttttatgttaattaataagttcttatcaacgaaaattatatcttcataaactgtttttttataaattatgttaacaagcttatga 7576911  T
Q  612 ataa 615  Q
    ||||    
T  7576912 ataa 7576915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 563
Target Start/End: Original strand, 10755211 - 10755285
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    |||||||| |||||||||  || | ||||||||||||||||||| |||| ||||||||| ||| |||||||||||    
T  10755211 ttgagcttctgaaaaatagtttatgcaaataaataagcttttatgttaattcataagttcttactaacgaaaatt 10755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 9764319 - 9764400
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||| |||||||||||||  || | ||||||||||||||||||| |||| | |||||| || ||||||||||||| ||||||    
T  9764319 ttgaacttatgaaaaataatttatgcaaataaataagcttttatgttaatttataagtgttcattaacgaaaattgtatctt 9764400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 636
Target Start/End: Complemental strand, 24625915 - 24625862
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||||||||  ||||||||||| ||||||| | ||||||||||||||||||    
T  24625915 tttcataaactaccttaacaagcttatgaataatacataaaagcgtatttattt 24625862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 563
Target Start/End: Original strand, 10730142 - 10730210
Alignment:
Q  496 ttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaatt 563  Q
    |||||||||||  ||| |||||||||||||| |||||| |||| ||||||||| |||||||| ||||||    
T  10730142 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataagttcttattaacaaaaatt 10730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 660
Target Start/End: Complemental strand, 6632733 - 6632646
Alignment:
Q  573 taagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctc 660  Q
    ||||||||  ||||||||||||  |||||||| || | ||||| | |||||||| ||||||||| ||| |||| ||||| ||||||||    
T  6632733 taagttgttttttcataaactacattaacaagtttataaataatacataaaagcatatttatttgcataagttgttttgaataagctc 6632646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 532
Target Start/End: Original strand, 23239232 - 23239275
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttat 532  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  23239232 ttgagcttatgaaaaataacttatacaaataaataagcttttat 23239275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 35071359 - 35071414
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtt 547  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| |||||||||    
T  35071359 agcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagtt 35071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 662
Target Start/End: Complemental strand, 10687443 - 10687292
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||||||||||| | |  ||||||||| |   ||||||||||| |||||   ||||||||  || |||||||||  |||| | |||| |||||    
T  10687443 caaataaataagcttttatgtcagttcataagttctcgctaacgaaaattgtatctccataagttgtttttacataaactaccttaataggcttatgaat 10687344  T
Q  614 aaaaa---ataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    |||||   || ||||| ||||||||| ||| || | ||||| ||||||||||    
T  10687343 aaaaatacatcaaagcttatttatttgcataagctgttttgaataagctcaa 10687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 619 - 667
Target Start/End: Original strand, 23239362 - 23239410
Alignment:
Q  619 ataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
    |||||||| ||||||||| ||| || |||||| ||||||||||||||||    
T  23239362 ataaaagcttatttatttgcataagctatttttcataagctcaatccaa 23239410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 19021396 - 19021494
Alignment:
Q  321 ggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||| | ||||||||||||  |||||| |||||||||||| |||| |||||||||||    
T  19021396 ggcactcttgtaattgactcttttagctggggttttggcactccttatactgaaatctccaagctttcaataatttaatccattttagtttcttaaaaa 19021494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 636
Target Start/End: Original strand, 13625456 - 13625596
Alignment:
Q  498 atgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactt-tcataaactat 595  Q
    |||||||||| ||| | ||||||||||| |||||||||||| | ||||||||| | ||||||||||||||||||| |||| |||  || ||||||||||     
T  13625456 atgaaaaatagcttatgcaaataaataaacttttatattaatttataagttttcactaacgaaaattttatctttataagctgtttttatcataaactac 13625555  T
Q  596 tttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
     | ||||||||| ||||||| |||||||||| |||||||||    
T  13625556 ctcaacaagcttatgaataataaataaaagcatatttattt 13625596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 518 - 658
Target Start/End: Complemental strand, 42852150 - 42852011
Alignment:
Q  518 taaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaa 617  Q
    ||||||||||||||| |||| ||||||||| | | ||||||||||| ||| ||| ||||||||  ||||||||||||| || |||||||| ||||||| |    
T  42852150 taaataagcttttatgttaattcataagttctcactaacgaaaattgtat-tttataagttgttttttcataaactatcttgacaagcttatgaataata 42852052  T
Q  618 aataaaagcgtatttattttcattagttattttgcataagc 658  Q
     |||||||| |||||||||  || || | ||||||||||||    
T  42852051 cataaaagcttatttatttgaataagctgttttgcataagc 42852011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 490 - 636
Target Start/End: Original strand, 40152804 - 40152951
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||| ||||||||||| ||||| | ||||||||||| |||||||||||| ||||||||| | |  |||||||||||||||||  ||| ||||  ||||||    
T  40152804 ttgaacttatgaaaaacatcttatgcaaataaataatcttttatattaattcataagttctcaagaacgaaaattttatcttcataaattgttttttcat 40152903  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||||||| |||||||  || || |||| |||||||| | |||||||||    
T  40152904 aaactatcttaacaaatttatggataataaataaaaacttatttattt 40152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 317 - 419
Target Start/End: Complemental strand, 39143317 - 39143215
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    |||||||| |||||||||||||||||| ||||  | |||||||| ||||| ||||||||||||||| |||||  || ||||||||| |||| ||||||||    
T  39143317 ttttggcactcttgtaattgactcttttagctatgattttggcactccttatgctgaaatctccaggctttcggtattttaatccattttagtttcttaa 39143218  T
Q  417 aaa 419  Q
    |||    
T  39143217 aaa 39143215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 22639563 - 22639664
Alignment:
Q  318 tttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaa 417  Q
    ||||||| |||||||| ||||||||| | |||||||||||||| |||||||| |||||||||||  |||||| || ||||||||| |||| |||||| ||    
T  22639563 tttggcactcttgtaactgactcttttaactggggttttggcactccttgtgatgaaatctccaaactttcagtattttaatccattttagtttcttcaa 22639662  T
Q  418 aa 419  Q
    ||    
T  22639663 aa 22639664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 514 - 662
Target Start/End: Original strand, 7364262 - 7364410
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    |||||||||||||||||||||||| ||||||||| | | |||| || ||| ||||||  ||||||||   || ||||||||  ||||||||||| |||||    
T  7364262 caaataaataagcttttatattaattcataagttctcactaacaaatattgtatcttcataagttgtttgttgataaactaccttaacaagcttatgaat 7364361  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    || ||||| |||| ||||| ||| ||| || | |||| |||||||||||    
T  7364362 aataaatagaagcttatttttttgcatcagctgttttacataagctcaa 7364410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 493 - 636
Target Start/End: Complemental strand, 28625635 - 28625491
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| ||||| ||| | | ||||||||||| ||||||  |||| |||  |||||||||    
T  28625635 agcttatgaaaaataacttatgcaaataaataagcttttatgttaattcataggttctcactaacgaaaattgtatcttcataagctgttttttcataaa 28625536  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    |||  || |||||||| ||||||| |  ||||||| |||||||||    
T  28625535 ctaccttgacaagcttatgaataatacttaaaagcttatttattt 28625491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 493 - 636
Target Start/End: Complemental strand, 24030369 - 24030226
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||| ||||||| ||| | ||||||||||||||||||| |||| ||||||||| | | ||||||||||| |||| |   ||| |||  |||||||||    
T  24030369 agcttattaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgtatcctcgcaag-tgttttttcataaa 24030271  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||| ||| |||||||| ||||||| | |||||||| |||||||||    
T  24030270 ctactttgacaagcttatgaataatacataaaagcttatttattt 24030226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 6537080 - 6537181
Alignment:
Q  317 ttttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaa 416  Q
    ||||| |||| |||||||||||||||| ||||  | |||||||| ||||| |||||||||||||||  ||||| |||||| ||||| |||| ||||||||    
T  6537080 ttttgacatttttgtaattgactcttt-agcttagattttggcactccttatgctgaaatctccagagtttcagtaatttcatccattttagtttcttaa 6537178  T
Q  417 aaa 419  Q
    |||    
T  6537179 aaa 6537181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 656
Target Start/End: Original strand, 13060555 - 13060697
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||||||||||| |||| ||||||||| | | ||||||||||  || |||  |||| |||  ||||||||||||  || |||||||| ||||     
T  13060555 caaataaataagcttttatgttaattcataagttctcactaacgaaaatggtaacttcataagctgttttttcataaactaccttgacaagcttatgaac 13060654  T
Q  614 aaaaaataaaagcgtatttattttcattagttattttgcataa 656  Q
    || | |||||||| ||||||||| ||| |||| |||| |||||    
T  13060655 aatacataaaagcttatttatttgcataagttcttttacataa 13060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 607
Target Start/End: Complemental strand, 35537002 - 35536885
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||| |||||||||||| ||| | |||||||||||||||||||||||  ||||||||| | | ||||||||||| ||||||  |||| |||  ||||||    
T  35537002 ttgagattatgaaaaatagcttatgcaaataaataagcttttatattat-tcataagttctcagtaacgaaaattgtatcttcataagctgttttttcat 35536904  T
Q  589 aaactattttaacaagctt 607  Q
    ||||||| || ||||||||    
T  35536903 aaactatcttgacaagctt 35536885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 662
Target Start/End: Original strand, 29922117 - 29922290
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||| |||||||||||| ||| | |||||||||||||||||||||||| ||||||| | | | |||  |||||| ||| |   |||| |||  ||||||    
T  29922117 ttgagtttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagctctcactaaaaaaaattgtatatgcataagctgtgttttcat 29922216  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||  || |||||||| ||||||| | |||||| | ||||||||| ||| |  | ||||||||||||||||    
T  29922217 aaactaccttgacaagcttatgaataatacataaaaacttatttatttgcataaactgttttgcataagctcaa 29922290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 570
Target Start/End: Complemental strand, 40697164 - 40697083
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctt 570  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||| |  ||| |||||| ||||||    
T  40697164 ttgagcttatgaaaaatagcttatacaaataaataagcttttatgttaattcataagttttcaggaacaaaaattgtatctt 40697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 492 - 635
Target Start/End: Original strand, 11912032 - 11912176
Alignment:
Q  492 gagcttatgaaaaatatcttta-caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataa 590  Q
    |||||||||||||||||||| | |||||||||||||||| || |||| ||||||||| | | |||| |||||| ||||||  |||| | |  ||||| ||    
T  11912032 gagcttatgaaaaatatcttgagcaaataaataagctttcatgttaattcataagttctcactaacaaaaattgtatcttcataagctcttttttcacaa 11912131  T
Q  591 actattttaacaagcttgtgaataaaaaataaaagcgtatttatt 635  Q
    |||| ||| ||||| || |||| || | |||||||| ||||||||    
T  11912132 actactttgacaagattatgaacaatacataaaagcttatttatt 11912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 660
Target Start/End: Complemental strand, 43319132 - 43318990
Alignment:
Q  518 taaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaa 617  Q
    |||||||| |||||| |||| ||||||||| | | ||||||||||| || |||  |||  |||  ||||||||||||  ||||||||||| | ||||| |    
T  43319132 taaataagtttttatcttaattcataagttctcactaacgaaaattataccttcataaactgttttttcataaactacattaacaagcttataaataata 43319033  T
Q  618 aataaaagcgtatttattttcattagttattttgcataagctc 660  Q
     |||||  | ||||||||| ||| |||| ||||||||||||||    
T  43319032 cataaagacatatttatttgcataagttgttttgcataagctc 43318990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 515 - 662
Target Start/End: Original strand, 2878631 - 2878777
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 614  Q
    |||||||||||||||||| |||| | | ||||||| | |||| |||||| |||| ||||||  |||  |||||||||| |  || |||| ||| ||||||    
T  2878631 aaataaataagcttttatgttaatttaaaagttttcactaacaaaaattgtatc-ttctaaactgttgtttcataaaccacattgacaaacttatgaata 2878729  T
Q  615 aaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    | | |||||||| ||||||||| ||| || | ||| ||||||||||||    
T  2878730 atagataaaagcttatttatttgcataagctgtttagcataagctcaa 2878777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 645
Target Start/End: Complemental strand, 17657375 - 17657244
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaat 613  Q
    ||||||||||| ||||||| |||| ||||||||| | | ||||||||||  ||||||  |||| |||  ||||||||||||   |  ||||||| |||||    
T  17657375 caaataaataaccttttatgttaattcataagttctcactaacgaaaatcgtatcttcataagatgttttttcataaactacaatggcaagcttatgaat 17657276  T
Q  614 aaaaaataaaagcgtatttattttcattagtt 645  Q
    || | |||||||| ||||||||| ||| ||||    
T  17657275 aatacataaaagcttatttatttgcataagtt 17657244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 635
Target Start/End: Complemental strand, 1868940 - 1868858
Alignment:
Q  553 taacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttatt 635  Q
    ||||||||||| ||||||  |||||||   ||||||||||||  || |||||||||||||||| | |||||||| ||||||||    
T  1868940 taacgaaaattgtatcttcataagttgatttttcataaactaccttgacaagcttgtgaataatacataaaagcttatttatt 1868858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 584 - 662
Target Start/End: Original strand, 22201959 - 22202037
Alignment:
Q  584 ttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    |||||||||||  || |||||||| ||||||| | |||||||| ||||||||| ||| || | ||||||||||||||||    
T  22201959 ttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttacataagctgttttgcataagctcaa 22202037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 571
Target Start/End: Original strand, 11163231 - 11163292
Alignment:
Q  510 tttacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatcttt 571  Q
    ||||||||||||||||||||||| |||| |||||||||   | ||||||||||| |||||||    
T  11163231 tttacaaataaataagcttttatgttaattcataagttcgcactaacgaaaattgtatcttt 11163292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 662
Target Start/End: Complemental strand, 17128348 - 17128263
Alignment:
Q  577 ttgtactttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||| |||||||||||| ||| | ||| || ||||||| | |||||||| ||||||||| ||| || | ||||||||||||||||    
T  17128348 ttgtattttcataaactactttgataagtttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaa 17128263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 607
Target Start/End: Complemental strand, 28357274 - 28357181
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagctt 607  Q
    ||||||||||||||||||| |||| | |||||||||  |||||||||||| ||||||  |||  |||  ||||||||||||  || ||||||||    
T  28357274 caaataaataagcttttatgttaatttataagttttcgttaacgaaaattgtatcttcataacctgttttttcataaactacattgacaagctt 28357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 926759 - 926819
Alignment:
Q  348 tggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaa 408  Q
    ||||||||||||| ||||||||||||||||||||   ||||| |||| ||||||| |||||    
T  926759 tggggttttggcactccttgtgctgaaatctccaaattttcagtaatataatccattttaa 926819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 662
Target Start/End: Original strand, 1371921 - 1372094
Alignment:
Q  487 ggattgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtacttt 585  Q
    ||||||||||||||||||||| ||| |||||||||||||| |||||| |||| | ||||| | | |||||||||||||  |||||  | |  |||  |||    
T  1371921 ggattgagcttatgaaaaataacttatacaaataaataag-ttttatgttaatttataag-tctcattaacgaaaattaaatcttcatcaactgt-tttt 1372017  T
Q  586 cataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
    ||||||| |  || |||||||| | ||||| | ||||||| |||||||||| ||| |  | ||||||||||||||||    
T  1372018 cataaaccacatttacaagcttataaataatacataaaagtgtatttatttacataaactgttttgcataagctcaa 1372094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 663
Target Start/End: Original strand, 10537241 - 10537321
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaat 663  Q
    ||||||||||||| || |||||||| | ||||| | |||||||| ||||||||| ||| || | |||| ||||||||||||    
T  10537241 tttcataaactatcttgacaagcttataaataatacataaaagcttatttatttgcataagctgttttacataagctcaat 10537321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 515 - 615
Target Start/End: Complemental strand, 41419633 - 41419533
Alignment:
Q  515 aaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaata 614  Q
    ||||||||||| |||||| |||| | ||||||| | | ||||||||||| ||||||  |||| |||  ||||||||||||  || |||||||| ||||||    
T  41419633 aaataaataagtttttatgttaattgataagttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaata 41419534  T
Q  615 a 615  Q
    |    
T  41419533 a 41419533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 544
Target Start/End: Complemental strand, 6125444 - 6125389
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataa 544  Q
    |||| ||||||||||||| ||| | |||||||||||||||||||||||| ||||||    
T  6125444 ttgaacttatgaaaaatagcttatgcaaataaataagcttttatattaattcataa 6125389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 636
Target Start/End: Complemental strand, 6144896 - 6144749
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||||||  || | |||||||| ||||||||||||||| ||||||||| |   |||| |||||| ||| ||  |||| | |  ||||||    
T  6144896 ttgagcttatgaaaaatagtttatgcaaataaacaagcttttatattaattcataagttctcgctaacaaaaattgtatattcataagctattttttcat 6144797  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattt 636  Q
    ||| ||  || |||||||| ||| ||| | |||||||| |||||||||    
T  6144796 aaaataccttgacaagcttatgagtaatatataaaagcttatttattt 6144749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 658
Target Start/End: Complemental strand, 11991369 - 11991294
Alignment:
Q  583 tttcataaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagc 658  Q
    |||||||||| || || |||||||| | ||||| | |||||||| ||||||||| ||| |||| ||||||||||||    
T  11991369 tttcataaaccatatttacaagcttataaataatacataaaagcttatttatttacataagttgttttgcataagc 11991294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 38498699 - 38498623
Alignment:
Q  516 aataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaacta 594  Q
    ||||||||||||||||| |||| | ||||||||| | |||| |||||| ||||||| ||| ||||  ||||||||||||    
T  38498699 aataaataagcttttattttaatttataagttttcactaacaaaaattatatctttataaattgt--tttcataaacta 38498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 615
Target Start/End: Original strand, 40452405 - 40452532
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacg-aaaattttatctttctaagttgtactttca 587  Q
    |||||||||||||||||| ||| | |||||||||||||| |||| || | ||||||||| | | ||||| |||||| ||||||  |||| |||   ||||    
T  40452405 ttgagcttatgaaaaatagcttatgcaaataaataagctattatgtttattcataagttctcactaacgaaaaattatatcttcataagctgtttcttca 40452504  T
Q  588 taaactattttaacaagcttgtgaataa 615  Q
    |||||||  || |||||||| |||||||    
T  40452505 taaactaccttgacaagcttatgaataa 40452532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 632
Target Start/End: Original strand, 41059717 - 41059860
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    |||||||||||||||| |  || | ||||||||||||||||||| |||| ||||||||| | | |||||||||||  |||||  |||| ||   ||||||    
T  41059717 ttgagcttatgaaaaacagtttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgaatcttcataaggtgatttttcat 41059816  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtattt 632  Q
    |||| |  || | |||||| ||||||| | |||||||| |||||    
T  41059817 aaacaaccttgataagcttatgaataatacataaaagcttattt 41059860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 624
Target Start/End: Original strand, 23087736 - 23087842
Alignment:
Q  518 taaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaactattttaacaagcttgtgaataaaa 617  Q
    ||||| || ||||||||||| ||||||||| | | |||| |||||| || |||  | ||||||  ||||||||||||| ||||||||||| | ||||| |    
T  23087736 taaattagtttttatattaattcataagttctcactaacaaaaattgtaccttcatgagttgttttttcataaactatattaacaagcttataaataata 23087835  T
Q  618 aataaaa 624  Q
     ||||||    
T  23087836 cataaaa 23087842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 514 - 594
Target Start/End: Complemental strand, 27806048 - 27805968
Alignment:
Q  514 caaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaacta 594  Q
    ||||||||||| ||||||| |||| | ||||||||| | |||| |||||| ||||||| |||  |||  ||||||||||||    
T  27806048 caaataaataaacttttatgttaatttataagttttcactaacaaaaattgtatctttataacatgttttttcataaacta 27805968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 572
Target Start/End: Complemental strand, 41125832 - 41125748
Alignment:
Q  490 ttgagcttatgaaaaatatcttta-caaataaataagcttttatattaactcataagtttttattaacgaaaattt-tatctttc 572  Q
    ||||| |||||||||||| ||||  |||||| |||||||||||| |||| ||||||||| | | |||| ||||||| ||||||||    
T  41125832 ttgagtttatgaaaaatagcttttgcaaatatataagcttttatgttaattcataagttctcactaactaaaatttgtatctttc 41125748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 537
Target Start/End: Original strand, 42558645 - 42558693
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaa 537  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  42558645 ttgagcttatgaaaaatagcttatgcaaataaataagcttttattttaa 42558693  T

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Target: scaffold0041 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 94900 - 94973
Alignment:
Q  334 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagttta 407  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  94900 ttgactctttcagctgggattttggcactccttgtgctgaaatctccaggcttttaataatataatccatttta 94973  T

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Target: scaffold1367 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 493 - 667
Target Start/End: Complemental strand, 1213 - 1038
Alignment:
Q  493 agcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcataaa 591  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||   ||||||| | | ||| |||| || ||||||  |||||| |  || ||||||    
T  1213 agcttatgaaaaataacttatgcaaataaataagcttttatattaaagtataagttctcactaatgaaatttgtatcttcataagttatttttccataaa 1114  T
Q  592 ctattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaatccaa 667  Q
     ||  ||||||| ||| || |||| |||||||||| ||||||||| ||| |||| ||||| ||||||  |||||||    
T  1113 ttaccttaacaatcttatggataataaataaaagcttatttatttgcataagttgttttgtataagcctaatccaa 1038  T

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Target: scaffold0300 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 9581 - 9682
Alignment:
Q  318 tttggcattcttgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaa 417  Q
    ||||||| |||||||| ||||||||| ||||||| ||||| || | ||||||||||||||| ||| |||| | || ||||||||| |||| |||||| ||    
T  9581 tttggcactcttgtaactgactcttttagctgggattttgacacttcttgtgctgaaatcttcaggcttttagtattttaatccattttagtttcttcaa 9680  T
Q  418 aa 419  Q
    ||    
T  9681 aa 9682  T

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Target: scaffold0037 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 419
Target Start/End: Original strand, 997 - 1082
Alignment:
Q  334 ttgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||| ||||   |||| ||||||| ||||  ||||||||||    
T  997 ttgactctttcagctggggttttgtcactccttatgctgaaatctccagactttttgtaatataatccattttagcttcttaaaaa 1082  T

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Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 659
Target Start/End: Complemental strand, 24905 - 24733
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||| || ||| | |||||||||||| |||||| |||| | ||||||| | | ||| ||| ||| ||||||  | || |||  ||||||    
T  24905 ttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcat 24806  T
Q  589 aaacta--ttttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagct 659  Q
    ||||||  |||| |||||||| ||||||| | |||||||| ||||||||| ||| || | |||||| ||||||    
T  24805 aaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataagctgttttgcttaagct 24733  T

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Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 662
Target Start/End: Original strand, 24317 - 24489
Alignment:
Q  490 ttgagcttatgaaaaatatctt-tacaaataaataagcttttatattaactcataagtttttattaacgaaaattttatctttctaagttgtactttcat 588  Q
    ||||||||||||||| ||  || | |||||||||| ||||||||  ||| ||| ||||||||| ||||||||||| ||||||  ||||||||  ||| ||    
T  24317 ttgagcttatgaaaagtagtttatgcaaataaataggcttttatgataattcacaagtttttactaacgaaaattatatcttcgtaagttgttattttat 24416  T
Q  589 aaactattttaacaagcttgtgaataaaaaataaaagcgtatttattttcattagttattttgcataagctcaa 662  Q
     |||||  || |||||||| ||||||| | ||| |||| ||||||||| ||| || | ||||| | ||||||||    
T  24417 caactaccttgacaagcttatgaataatacatacaagc-tatttatttgcataagctgttttgtagaagctcaa 24489  T

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Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 23809 - 23899
Alignment:
Q  329 tgtaattgactctttcagctggggttttggcaatccttgtgctgaaatctccagcctttcattaatttaatccagtttaatttcttaaaaa 419  Q
    |||||||| |||||||| ||  |||||||||| |||||||||||||||||| || |||| | |||| ||||| | ||||  ||||||||||    
T  23809 tgtaattgtctctttcaactacggttttggcactccttgtgctgaaatctcaaggcttttagtaatataatcaattttagcttcttaaaaa 23899  T

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