View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14363_high_11 (Length: 449)
Name: NF14363_high_11
Description: NF14363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14363_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 404; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 1 - 416
Target Start/End: Original strand, 43602740 - 43603155
Alignment:
| Q |
1 |
tattttcccactaagctctctgattttgagtccctacaaacaacttaccactgtgcctcttctgtcctaagaaacgacggacaaatcacgtctatagcat |
100 |
Q |
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| T |
43602740 |
tattttcccactaagctctctgattttgagtccctacaaacaacttaccactgtgcctcttctgtcctaagaaacgacggacaaatcacgtccatagcat |
43602839 |
T |
|
| Q |
101 |
tgtcatcaggtggtttactttacacaggctctgattccaatgttgtaaggtgttggaaactgcctgagttcactgaatgtggacagttgaagactaaagc |
200 |
Q |
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| T |
43602840 |
tgtcatcaagtggtttactttacacaggctctgattccaatgttgtaaggtgttggaaactgcctgagttcactgaatgtggacagttgaagactaaagc |
43602939 |
T |
|
| Q |
201 |
ttcaaaagttgtggctattgaggtttccaatgacactgtttatgcagcttatggtgatggcaagattagagtgtggacaataatttgggataacaaggtg |
300 |
Q |
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| T |
43602940 |
ttcaaaagttgtggctattgaggtttccaatgacactgtttatgcagcttatggtgatggcaagatcagagtgtggacaataatttgggataacaaggtg |
43603039 |
T |
|
| Q |
301 |
ttgaaacatgttcgatctgctactattcctaagacacttggctatgttcgtagctacatcgcagggaaagacaagacagtaagtctagtaccttaattgc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43603040 |
ttgaaacatgttcgatctgctactattcctaagacacttggctatgttcgtagctacatcgcagggaaagacaagacagtaagtctagtaccttaattgc |
43603139 |
T |
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| Q |
401 |
ctccatagctgtaata |
416 |
Q |
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|||||||||||||||| |
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| T |
43603140 |
ctccatagctgtaata |
43603155 |
T |
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