View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14363_low_23 (Length: 366)
Name: NF14363_low_23
Description: NF14363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14363_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 25 - 363
Target Start/End: Original strand, 48674293 - 48674634
Alignment:
| Q |
25 |
aattcaacagcttttagtgagttgtactgttgatgaaaaaatggctgaagaagattacatgccacaaagaaaagagaaaatgctgagatttgttacca-- |
122 |
Q |
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| T |
48674293 |
aattcaacagcttttagtgaac---actgttgatgaaaaaatggctgaagaagattacatgccacaaagaaaagagaaaatgctgagatttgttaccatg |
48674389 |
T |
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| Q |
123 |
----------aagatgatgcttaagttctccaatatacttacatttttcgcactcaacctttacacaaaaagagaagaaaacatgaaatgaaacctaata |
212 |
Q |
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| T |
48674390 |
tatgttgacaaagatcatgcttaagttctccaatatacttacatttttcgcactcaacctttacacaaaaagagaagaaaatatgaaatgaaacctaata |
48674489 |
T |
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| Q |
213 |
ttcaagtttgtgactaattctattaacataacatgacatgataacaaaaattgagcaacactatagccttaattaatattcaagtttatcatcccacatt |
312 |
Q |
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| T |
48674490 |
ttcaagtttgtgacta------ttaacataacatgacatgataacaaaaattgagcaacactatagccttaattaatattcaagtttatcatcccacatt |
48674583 |
T |
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| Q |
313 |
agaagcaaaacagtgcacctccacattatatacagtctagttctctgctcc |
363 |
Q |
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| T |
48674584 |
agaagcaaaacagtgcacctccacattatatacagtctagttttctgctcc |
48674634 |
T |
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