View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14363_low_31 (Length: 331)
Name: NF14363_low_31
Description: NF14363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14363_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 10 - 319
Target Start/End: Original strand, 53674819 - 53675128
Alignment:
| Q |
10 |
gaagaatatcagcagaaattgacttggcttcctccactaaaccaccacctactgtggaactcaatgccacttttgcctccaaattaacctgataatgatg |
109 |
Q |
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| T |
53674819 |
gaagaaaatcagcagaaattgacttggcttcctccactaaaccaccacctactgtggaactcaatgccacttttgcctccaaattaacctgataatgatg |
53674918 |
T |
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| Q |
110 |
ttttcatcagcattcttcgactctaatagcaaaccatattaaagtctaaccattatatgacagacagggtcaactatatttttgattccctctaaaatac |
209 |
Q |
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| T |
53674919 |
ttttcatcagcattcttcgactctaatagcaaaccatattaaagtctaaccattatatgacagacagggtcaactatattttttattccctctaaaatac |
53675018 |
T |
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| Q |
210 |
tcttcatcttagtacttactaaaatttggtcccctccatgtctctagaatccatccctattcaatgtcgttttttgcggactaatcagaaggaatgcaaa |
309 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
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| T |
53675019 |
tcttcatcttagtacttactaaaatttggtccactccatgtctctagaatccatccctatcgaatgtcgttttttgcagactaatcagaaggaatgcaaa |
53675118 |
T |
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| Q |
310 |
tcacgtaaac |
319 |
Q |
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|||||||||| |
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| T |
53675119 |
tcacgtaaac |
53675128 |
T |
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