View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14366_high_49 (Length: 255)
Name: NF14366_high_49
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14366_high_49 |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 9786461 - 9786699
Alignment:
| Q |
1 |
atttgacttgttcctggtgattattttatttcacaatattaaaacatgactatgtgattcatatcttaatatgcatgcaattcatatttcataaaatgca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
9786461 |
atttgacttgttcctggtgattattttatttcacaatattaaaacatgactatgtgattcatatctaaatatgcatgcaattcatatttcataaaatgca |
9786560 |
T |
|
| Q |
101 |
tggtaacagaaacaaggaaatgaagaatactagtgtgaaatgtggaggaataagagaggtttatttacagtttacaatttgaaatggtgaattcatgtag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
9786561 |
tggtaacagaaacaaggaaatgaagaatactagtgtgaaatgtggaggaataagagaggtttatttacagtttacaatttgaaatggtgaattcatgtag |
9786660 |
T |
|
| Q |
201 |
aagataactcaatatttcaccaaacaggactccattcat |
239 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |
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| T |
9786661 |
aagataactcaatatttcaccaaataggactccattcat |
9786699 |
T |
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