View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14366_high_53 (Length: 250)
Name: NF14366_high_53
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14366_high_53 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 38117759 - 38117540
Alignment:
| Q |
16 |
attataagggctgcaagtattaatgtcatttgaaaacaattgagtggttccatgagtactaggtttatgttttgattaaattaaggtaagggatgattat |
115 |
Q |
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| T |
38117759 |
attataagggctgctagtattaatgtcatttgaaaacaattgagtggtttcatgagtactaggtttatgttttgattaaattaaggtaagggatgattat |
38117660 |
T |
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| Q |
116 |
tatagtgcaatggttcaatattattttggagaagagaagtggtagatttgaatatataataaaggagttcaactaccttgatttttcaagtggaagagtc |
215 |
Q |
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| T |
38117659 |
tatagtgcaatggttcaatattattttggagaagagaagtggtagatttgaatatataataaaggagttcaactaccttgatttttcaagtggaagagtc |
38117560 |
T |
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| Q |
216 |
ttatgttagtttcttctgtg |
235 |
Q |
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|||||||||||||||||||| |
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| T |
38117559 |
ttatgttagtttcttctgtg |
38117540 |
T |
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