View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14366_high_66 (Length: 218)
Name: NF14366_high_66
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14366_high_66 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 29059382 - 29059596
Alignment:
| Q |
4 |
aggttgaagagtcagcagaaacttcatggtatctttgtttggtctgctgatgattccatgggaaatggatttcgttttgagaagcaatcacaagcacttt |
103 |
Q |
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| T |
29059382 |
aggttgaagagtcagcagaaacttcatggtatctttgtttggtctgctgatgattccatgggaaatggatttcgttttgagaagcaatcacaagcacttt |
29059481 |
T |
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| Q |
104 |
tggctatacattagtcaattaaatatatggtatatgtattgatgaattattttaaaatgtgtacttagtacttatgttgatactttgttgtgtaatatat |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
29059482 |
tggctatacattagtcaattaaatatatggtatatgtattgatgaattattttaaaatgtgtacttagtacttatgatgatactttgttgtgtaatatat |
29059581 |
T |
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| Q |
204 |
ctgtgaattaatatg |
218 |
Q |
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| T |
29059582 |
ctgtgaattaatatg |
29059596 |
T |
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