View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14366_high_7 (Length: 656)

Name: NF14366_high_7
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14366_high_7
NF14366_high_7
[»] chr7 (5 HSPs)
chr7 (235-642)||(41689006-41689413)
chr7 (42-235)||(41688782-41688965)
chr7 (241-366)||(41681723-41681848)
chr7 (532-585)||(41682029-41682083)
chr7 (76-204)||(41681512-41681643)
[»] chr4 (7 HSPs)
chr4 (43-119)||(44668640-44668716)
chr4 (43-119)||(44687916-44687992)
chr4 (40-116)||(45088954-45089030)
chr4 (43-94)||(45095418-45095469)
chr4 (334-367)||(45095803-45095836)
chr4 (309-362)||(44669009-44669062)
chr4 (309-362)||(44688285-44688338)
[»] chr1 (13 HSPs)
chr1 (34-98)||(43983344-43983408)
chr1 (40-116)||(44004751-44004827)
chr1 (40-93)||(43986159-43986212)
chr1 (37-111)||(43908406-43908480)
chr1 (41-99)||(42414880-42414938)
chr1 (40-94)||(43917832-43917886)
chr1 (42-108)||(43990943-43991009)
chr1 (41-92)||(23682390-23682441)
chr1 (237-284)||(43908127-43908174)
chr1 (252-291)||(43993934-43993973)
chr1 (34-92)||(19567318-19567376)
chr1 (45-94)||(43993626-43993675)
chr1 (311-363)||(43986536-43986588)
[»] chr2 (7 HSPs)
chr2 (40-115)||(24002338-24002413)
chr2 (41-116)||(20596094-20596169)
chr2 (237-291)||(20578413-20578467)
chr2 (34-119)||(20575447-20575532)
chr2 (41-98)||(20585241-20585298)
chr2 (41-98)||(20603568-20603625)
chr2 (41-98)||(20895404-20895461)
[»] chr8 (4 HSPs)
chr8 (236-289)||(42694112-42694165)
chr8 (42-116)||(42694391-42694465)
chr8 (34-94)||(42700091-42700151)
chr8 (40-112)||(24041718-24041790)


Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 235 - 642
Target Start/End: Original strand, 41689006 - 41689413
Alignment:
Q  235 atgggaaatttggaatagttttccaagaatcttcgccaaaggtataaattttggtcagataatcattcgtattgtgcacaactagtagcaccttatattt 334  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41689006 atgggaaatttggaatagttttccaagaatcttcaccaaaggtataaattttggtcagataatcattcgtattgtgcacaactagtagcatcttatattt 41689105  T
Q  335 gtcgttaacttgatcatagccaaagccataatagcaatgcacgcaatcaagcgatgaagattttggagaatttttggatataaacctgatagaaaggttg 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41689106 gtcgttaacttgatcatagccaaagccataatagcaatgcacgcaatcaagcgatgaagattttggagaatttttggatataaacctgatagaaaggttg 41689205  T
Q  435 tatagactgaaactatgttgagagctaatatacatacacaacaacccattgcatgaacctagaatattgcgagacgtagtgactgtgaagctaccaggtt 534  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41689206 tatagactgaaactacgttgagagctaatatacatacacaacaacccatagcatgaacctagaatattgcgagacgtagtgactgtgaagctaccaggtt 41689305  T
Q  535 caacacaggttaatgagttttcgaacaatggcttaaagggtaagaatagatcctgcagttgttgagttcacatatattggaaacaagcaattgctggtgg 634  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41689306 caacacgggttaatgagttttcgaacaatggcttaaagggtaagaatagatcctgcagttgttgagttcacatatattggaaacaagcaattgttggtgg 41689405  T
Q  635 ttcaagct 642  Q
    ||||||||    
T  41689406 ttcaagct 41689413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 42 - 235
Target Start/End: Original strand, 41688782 - 41688965
Alignment:
Q  42 agggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgttnnnnnnncacacacaaagacaa 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||    
T  41688782 agggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgttaaaaaa--acacacaaagacaa 41688879  T
Q  142 ttactcaaaacatacagcatatctttgcacatgtagtcaccatcactttgaggcagcaacactaacacctcttttatcatccatccaattcaga 235  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41688880 --------aacatacagcatatctttgcacatgtagtcaccatcactttgaggcagcaacagtaacacctcttttatcatccatccaattcaga 41688965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 241 - 366
Target Start/End: Original strand, 41681723 - 41681848
Alignment:
Q  241 aatttggaatagttttccaagaatcttcgccaaaggtataaattttggtcagataatcattcgtattgtgcacaactagtagcaccttatatttgtcgtt 340  Q
    ||||| ||||||||| | ||||||||||  |||||||||||| | ||||||||||||||||  ||||| ||||||| | |||||||| |||  |||| ||    
T  41681723 aatttagaatagtttcctaagaatcttcttcaaaggtataaagtatggtcagataatcattgttattgcgcacaacgactagcacctcataactgtcatt 41681822  T
Q  341 aacttgatcatagccaaagccataat 366  Q
    ||||||||||||||||||||||||||    
T  41681823 aacttgatcatagccaaagccataat 41681848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 585
Target Start/End: Original strand, 41682029 - 41682083
Alignment:
Q  532 gttcaacacaggttaatgagttttcgaacaatggctt-aaagggtaagaatagat 585  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  41682029 gttcaacacgggtcaatgagttttcgaacaatggcttcaaagggtaagaatagat 41682083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 41681512 - 41681643
Alignment:
Q  76 actctatactctttcatcaaccatgcaacccaatgagttttgttnnnnnnncacacacaaagacaattactcaaaacataca---gcatatctttgcaca 172  Q
    |||| ||||||||||||||||||  ||||||||||||| |||||       ||||||||||| | || ||||||||||| ||    |||||||||| | |    
T  41681512 actccatactctttcatcaaccacacaacccaatgagtcttgttcaaaaaacacacacaaaggcgatcactcaaaacatgcatattcatatctttgtata 41681611  T
Q  173 tgtagtcaccatcactttgaggcagcaacact 204  Q
     | ||||||| ||||||||||||| |||||||    
T  41681612 cgaagtcaccgtcactttgaggcaacaacact 41681643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 44668640 - 44668716
Alignment:
Q  43 gggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgtt 119  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||  |||||||||||||||||||    
T  44668640 gggatgatcatcagtttagtccatgactcaacaactccatactctttcatcatccacacaacccaatgagttttgtt 44668716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 44687916 - 44687992
Alignment:
Q  43 gggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgtt 119  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||  |||||||||||||||||||    
T  44687916 gggatgatcatcagtttagtccatgactcaacaactccatactctttcatcatccacacaacccaatgagttttgtt 44687992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 45088954 - 45089030
Alignment:
Q  40 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagtttt 116  Q
    ||||||||||| |||||||||| ||| ||||||| ||||| |||||||||||||| |||  ||||||||||||||||    
T  45088954 tgagggatgattatcaatttagcccacgactcaataactccatactctttcatcatccacacaacccaatgagtttt 45089030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 45095418 - 45095469
Alignment:
Q  43 gggatgatcatcaatttagtccatgactcaacaactctatactctttcatca 94  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45095418 gggatgatcatcattttagtccatgactcaacaactccatactctttcatca 45095469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 367
Target Start/End: Original strand, 45095803 - 45095836
Alignment:
Q  334 tgtcgttaacttgatcatagccaaagccataata 367  Q
    ||||||||||||||||||||||||||||||||||    
T  45095803 tgtcgttaacttgatcatagccaaagccataata 45095836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 44669009 - 44669062
Alignment:
Q  309 tgcacaactagtagcaccttatatttgtcgttaacttgatcatagccaaagcca 362  Q
    |||||||||  ||| ||||| ||  |||||||||||||||||||||||||||||    
T  44669009 tgcacaactgctaggaccttgtacctgtcgttaacttgatcatagccaaagcca 44669062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 44688285 - 44688338
Alignment:
Q  309 tgcacaactagtagcaccttatatttgtcgttaacttgatcatagccaaagcca 362  Q
    |||||||||  ||| ||||| ||  |||||||||||||||||||||||||||||    
T  44688285 tgcacaactgctaggaccttgtacctgtcgttaacttgatcatagccaaagcca 44688338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 43983344 - 43983408
Alignment:
Q  34 ttctcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaacca 98  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  43983344 ttctcatgagggatgatcatgaatttagtccatgactcaacaactccatactctttcatcaacca 43983408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 44004751 - 44004827
Alignment:
Q  40 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagtttt 116  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||  ||  ||||||||||||    
T  44004751 tgagggatgatcatcaatttagtccatgactcagcaactccatactctttcatcatccacacagtccaatgagtttt 44004827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 43986159 - 43986212
Alignment:
Q  40 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatc 93  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  43986159 tgagggataatcatcaatttagtccatgactcaacaactccatactctttcatc 43986212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 43908480 - 43908406
Alignment:
Q  37 tcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatga 111  Q
    |||||||||||||| | ||||||||||||||||| | |||||| |||||||||||||| |||| ||| |||||||    
T  43908480 tcgtgagggatgataaacaatttagtccatgacttagcaactccatactctttcatcatccatacaatccaatga 43908406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 42414938 - 42414880
Alignment:
Q  41 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccat 99  Q
    ||||||||||||||||||||||||| ||||||  ||||| ||||| |||||||||||||    
T  42414938 gagggatgatcatcaatttagtccaagactcagtaactccatactgtttcatcaaccat 42414880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 43917886 - 43917832
Alignment:
Q  40 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatca 94  Q
    |||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||    
T  43917886 tgagggatgatcatgaatttagtccatgactcaaaaactccacactctttcatca 43917832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 43990943 - 43991009
Alignment:
Q  42 agggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaa 108  Q
    |||||||||||||||||||||||||||||||| ||  | |||||||||||||| |||  ||||||||    
T  43990943 agggatgatcatcaatttagtccatgactcaataatgccatactctttcatcatccacacaacccaa 43991009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 23682441 - 23682390
Alignment:
Q  41 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcat 92  Q
    ||||||||||| |||||  ||||||||||||| |||||| ||||||||||||    
T  23682441 gagggatgatcgtcaatacagtccatgactcagcaactccatactctttcat 23682390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 43908174 - 43908127
Alignment:
Q  237 gggaaatttggaatagttttccaagaatcttcgccaaaggtataaatt 284  Q
    ||||||||||||| || ||||||||||| ||| |||||||||||||||    
T  43908174 gggaaatttggaagagatttccaagaattttcaccaaaggtataaatt 43908127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 43993934 - 43993973
Alignment:
Q  252 gttttccaagaatcttcgccaaaggtataaattttggtca 291  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  43993934 gttttccaagaattttcaccaaaggtataaattttggtca 43993973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 19567318 - 19567376
Alignment:
Q  34 ttctcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcat 92  Q
    ||||| |||| ||||||  ||||| |||||||||||||| |||||| ||||||||||||    
T  19567318 ttctcatgagagatgattgtcaatatagtccatgactcagcaactccatactctttcat 19567376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 43993626 - 43993675
Alignment:
Q  45 gatgatcatcaatttagtccatgactcaacaactctatactctttcatca 94  Q
    |||||| || ||||||||||||||||||| ||||| ||||| ||||||||    
T  43993626 gatgattatgaatttagtccatgactcaaaaactccatactatttcatca 43993675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 43986536 - 43986588
Alignment:
Q  311 cacaactagtagcaccttatatttgtcgttaacttgatcatagccaaagccat 363  Q
    |||||||| ||||||||| || |||||||||| ||| ||||||||||| ||||    
T  43986536 cacaactactagcaccttgtacttgtcgttaatttggtcatagccaaaaccat 43986588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 24002413 - 24002338
Alignment:
Q  40 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttt 115  Q
    |||||||||||  ||||||| |||||||||||||||||||  |||| |||||||| |||  |||||||||||||||    
T  24002413 tgagggatgattttcaattttgtccatgactcaacaactccgtactttttcatcatccacacaacccaatgagttt 24002338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 20596094 - 20596169
Alignment:
Q  41 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagtttt 116  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| | |||||| |||||   | |||||||||||||    
T  20596094 gagggatcatcatcaatctagtccatgactcagcaactccatattttttcattaaccaaaaatcccaatgagtttt 20596169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 20578413 - 20578467
Alignment:
Q  237 gggaaatttggaatagttttccaagaatcttcgccaaaggtataaattttggtca 291  Q
    |||||||||||||| |||||| ||||||  || ||||| ||||||||||||||||    
T  20578413 gggaaatttggaatggttttcaaagaattctcaccaaaagtataaattttggtca 20578467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 20575447 - 20575532
Alignment:
Q  34 ttctcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagttttgtt 119  Q
    ||||| |||||||| ||||||||  ||||||| || ||| ||| || |||   |||||||||||||| |||| |||||||||||||    
T  20575447 ttctcatgagggatcatcatcaacctagtccaagattcagcaattccatatattttcatcaaccatgaaaccaaatgagttttgtt 20575532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 20585241 - 20585298
Alignment:
Q  41 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaacca 98  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| | |||||| |||||    
T  20585241 gagggatcatcatcaatctagtccatgactcagcaactccatattttttcattaacca 20585298  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 20603568 - 20603625
Alignment:
Q  41 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaacca 98  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| | |||||| |||||    
T  20603568 gagggatcatcatcaatctagtccatgactcagcaactccatattttttcattaacca 20603625  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 20895461 - 20895404
Alignment:
Q  41 gagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaacca 98  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| | |||||| |||||    
T  20895461 gagggatcatcatcaatctagtccatgactcagcaactccatattttttcattaacca 20895404  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 42694165 - 42694112
Alignment:
Q  236 tgggaaatttggaatagttttccaagaatcttcgccaaaggtataaattttggt 289  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  42694165 tgggaaatttggaacagttttccaagaattttcaccaaaggtataaattctggt 42694112  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 42694465 - 42694391
Alignment:
Q  42 agggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgagtttt 116  Q
    |||||||||||||||||||||||||||||||  ||||| ||| |  ||||||| |||| || |||||||| ||||    
T  42694465 agggatgatcatcaatttagtccatgactcagtaactccatattgattcatcatccatacaccccaatgattttt 42694391  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 42700151 - 42700091
Alignment:
Q  34 ttctcgtgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatca 94  Q
    ||||| ||||| |||| |||||||||||||||||||||| |||||| ||| | ||||||||    
T  42700151 ttctcatgaggaatgaacatcaatttagtccatgactcagcaactccatattgtttcatca 42700091  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 24041718 - 24041790
Alignment:
Q  40 tgagggatgatcatcaatttagtccatgactcaacaactctatactctttcatcaaccatgcaacccaatgag 112  Q
    |||||||||||  ||| ||| ||||||||||||||||| || | || |||||||| |||  ||||||||||||    
T  24041718 tgagggatgattttcagttttgtccatgactcaacaacgctgttctttttcatcatccacacaacccaatgag 24041790  T

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