View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14366_low_14 (Length: 536)
Name: NF14366_low_14
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14366_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 518; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 1 - 518
Target Start/End: Original strand, 46312082 - 46312599
Alignment:
| Q |
1 |
attccggaacactgctggaccggtaaaccatcaagccgtggcattgcgtgtcgattcagaccaatctgcattctttaggtgtagcatagaaggaaaccaa |
100 |
Q |
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| T |
46312082 |
attccggaacactgctggaccggtaaaccatcaagccgtggcattgcgtgtcgattcagaccaatctgcattctttaggtgtagcatagaaggaaaccaa |
46312181 |
T |
|
| Q |
101 |
gacacactttacgcacattcactgagacagttctaccgtgaatgcgaaatctatggaaccatagacttcatttttggcaatggagctgctgtgctacaaa |
200 |
Q |
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| T |
46312182 |
gacacactttacgcacattcactgagacagttctaccgtgaatgcgaaatctatggaaccatagacttcatttttggcaatggagctgctgtgctacaaa |
46312281 |
T |
|
| Q |
201 |
actgcaagatatacacaagagttccacttccattacaaaaggttacaatcacagctcaaggtaggaaaagtccacatcaaagcacagggtttacaatcca |
300 |
Q |
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| T |
46312282 |
actgcaagatatacacaagagttccacttccattacaaaaggttacaatcacagctcaaggtaggaaaagtccacatcaaagcacagggtttacaatcca |
46312381 |
T |
|
| Q |
301 |
agatagttatgttttggcctcacaacctacatatttggggaggccttggaaggaatattctagaacagtttacattaacacatacatgagtagtatggtt |
400 |
Q |
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| T |
46312382 |
agatagttatgttttggcctcacaacctacatatttggggaggccttggaaggaatattctagaacagtttacattaacacatacatgagtagtatggtt |
46312481 |
T |
|
| Q |
401 |
caacctcgagggtggctcgagtggctcggtaactttgcattagacactttgtggtacggcgaatacaggaattatggacctggttcatcactcgctggta |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46312482 |
caacctcgagggtggctcgagtggctcggtaactttgcattagacactttgtggtacggcgaatacaggaattatggacctggttcatcactcgctggta |
46312581 |
T |
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| Q |
501 |
gggtcaaatggcctggtt |
518 |
Q |
| |
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|||||||||||||||||| |
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| T |
46312582 |
gggtcaaatggcctggtt |
46312599 |
T |
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