View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14366_low_40 (Length: 345)

Name: NF14366_low_40
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14366_low_40
NF14366_low_40
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-118)||(253104-253204)
[»] chr4 (40 HSPs)
chr4 (18-118)||(14564171-14564271)
chr4 (19-110)||(4954084-4954175)
chr4 (18-110)||(29149340-29149432)
chr4 (18-110)||(39636746-39636838)
chr4 (18-110)||(6138653-6138745)
chr4 (18-110)||(13167486-13167578)
chr4 (18-110)||(48550460-48550552)
chr4 (18-110)||(49136483-49136575)
chr4 (19-110)||(43781552-43781642)
chr4 (33-110)||(49519706-49519783)
chr4 (18-110)||(2175180-2175272)
chr4 (18-110)||(16566266-16566358)
chr4 (18-110)||(25312676-25312768)
chr4 (18-70)||(26426187-26426239)
chr4 (34-110)||(46830102-46830178)
chr4 (18-110)||(51922901-51922993)
chr4 (18-110)||(54488566-54488658)
chr4 (19-110)||(46926010-46926101)
chr4 (18-110)||(54150487-54150579)
chr4 (18-110)||(43772156-43772248)
chr4 (18-110)||(48550178-48550270)
chr4 (18-110)||(48908236-48908326)
chr4 (17-99)||(26402984-26403066)
chr4 (18-110)||(28986982-28987071)
chr4 (18-118)||(6505162-6505262)
chr4 (18-110)||(9893672-9893764)
chr4 (18-66)||(14072464-14072512)
chr4 (18-110)||(30842093-30842184)
chr4 (18-110)||(38305972-38306064)
chr4 (18-110)||(42944931-42945023)
chr4 (18-110)||(48407731-48407822)
chr4 (18-110)||(54153006-54153097)
chr4 (18-110)||(56241868-56241960)
chr4 (18-69)||(30887227-30887278)
chr4 (18-69)||(55638861-55638912)
chr4 (48-110)||(38263890-38263952)
chr4 (18-67)||(9889410-9889459)
chr4 (21-66)||(32238135-32238180)
chr4 (78-110)||(33574199-33574231)
chr4 (82-110)||(41866179-41866207)
[»] chr8 (24 HSPs)
chr8 (21-118)||(440214-440311)
chr8 (18-110)||(3097239-3097331)
chr8 (20-110)||(33627067-33627157)
chr8 (18-110)||(6399141-6399233)
chr8 (18-110)||(25697993-25698084)
chr8 (18-90)||(36114093-36114165)
chr8 (18-110)||(3467517-3467609)
chr8 (18-110)||(8124955-8125046)
chr8 (18-70)||(27649730-27649782)
chr8 (18-110)||(28425505-28425597)
chr8 (18-110)||(43550875-43550967)
chr8 (35-110)||(40742125-40742200)
chr8 (19-110)||(44926826-44926916)
chr8 (18-110)||(31246348-31246440)
chr8 (18-110)||(41289091-41289183)
chr8 (18-69)||(41981141-41981192)
chr8 (20-110)||(24897621-24897710)
chr8 (18-99)||(29023223-29023304)
chr8 (22-110)||(22936826-22936914)
chr8 (18-110)||(42148989-42149081)
chr8 (18-70)||(45147323-45147375)
chr8 (49-108)||(38114460-38114518)
chr8 (33-110)||(15206695-15206772)
chr8 (49-110)||(26243139-26243200)
[»] chr1 (32 HSPs)
chr1 (18-103)||(4369843-4369928)
chr1 (18-103)||(7826395-7826480)
chr1 (18-110)||(5410640-5410731)
chr1 (18-110)||(13055998-13056089)
chr1 (34-110)||(42850253-42850329)
chr1 (18-110)||(31223374-31223466)
chr1 (18-110)||(43728912-43729003)
chr1 (18-110)||(47123386-47123478)
chr1 (18-110)||(35569236-35569328)
chr1 (18-110)||(45710049-45710140)
chr1 (18-110)||(48510908-48511000)
chr1 (17-110)||(50406129-50406222)
chr1 (77-118)||(49243008-49243049)
chr1 (18-110)||(1199827-1199919)
chr1 (18-110)||(6166110-6166201)
chr1 (18-66)||(6464608-6464656)
chr1 (18-110)||(11051345-11051436)
chr1 (18-110)||(12468213-12468304)
chr1 (18-110)||(20800311-20800403)
chr1 (18-70)||(35536072-35536124)
chr1 (18-100)||(11023374-11023455)
chr1 (18-110)||(15884226-15884319)
chr1 (18-66)||(10470590-10470638)
chr1 (18-110)||(12247420-12247511)
chr1 (18-70)||(36205191-36205243)
chr1 (18-117)||(13931623-13931721)
chr1 (18-97)||(25061226-25061305)
chr1 (18-110)||(50977374-50977465)
chr1 (17-70)||(9447532-9447585)
chr1 (18-103)||(26058241-26058326)
chr1 (29-110)||(27801686-27801767)
chr1 (18-66)||(25230007-25230055)
[»] chr5 (21 HSPs)
chr5 (18-110)||(3667844-3667936)
chr5 (18-110)||(40885200-40885293)
chr5 (18-110)||(35760179-35760271)
chr5 (19-110)||(34106977-34107068)
chr5 (28-108)||(28869535-28869615)
chr5 (19-110)||(32454528-32454618)
chr5 (18-99)||(41740634-41740715)
chr5 (18-110)||(13253113-13253204)
chr5 (18-110)||(22482179-22482271)
chr5 (18-70)||(40791139-40791191)
chr5 (18-70)||(42146298-42146350)
chr5 (18-100)||(7385972-7386054)
chr5 (18-66)||(2430370-2430418)
chr5 (18-118)||(27021118-27021218)
chr5 (35-110)||(39987997-39988072)
chr5 (19-117)||(4292140-4292238)
chr5 (18-67)||(3060296-3060344)
chr5 (18-110)||(40495388-40495479)
chr5 (18-110)||(5710416-5710507)
chr5 (18-110)||(8049081-8049173)
chr5 (16-60)||(13676497-13676541)
[»] chr2 (26 HSPs)
chr2 (18-110)||(2213491-2213583)
chr2 (18-110)||(28127318-28127410)
chr2 (18-110)||(9988532-9988624)
chr2 (18-110)||(7472705-7472796)
chr2 (18-118)||(28641627-28641727)
chr2 (18-110)||(39141501-39141592)
chr2 (19-110)||(28261280-28261371)
chr2 (18-110)||(1945070-1945162)
chr2 (18-110)||(25940272-25940364)
chr2 (18-70)||(31562755-31562807)
chr2 (18-91)||(23358243-23358316)
chr2 (18-110)||(3853885-3853977)
chr2 (18-110)||(5916273-5916364)
chr2 (18-110)||(36312262-36312353)
chr2 (19-69)||(2234913-2234962)
chr2 (18-100)||(32501971-32502052)
chr2 (20-98)||(44619104-44619182)
chr2 (49-110)||(31224696-31224757)
chr2 (21-70)||(42089603-42089652)
chr2 (18-118)||(7296140-7296240)
chr2 (18-66)||(14821148-14821196)
chr2 (78-118)||(34997259-34997299)
chr2 (18-64)||(8170298-8170344)
chr2 (55-109)||(11240693-11240747)
chr2 (59-117)||(45714692-45714750)
chr2 (18-110)||(42516007-42516098)
[»] chr3 (31 HSPs)
chr3 (18-103)||(52966849-52966934)
chr3 (18-110)||(26519640-26519732)
chr3 (18-110)||(15511409-15511500)
chr3 (18-110)||(31084184-31084275)
chr3 (19-100)||(31618930-31619011)
chr3 (18-110)||(42475685-42475777)
chr3 (18-97)||(10853313-10853392)
chr3 (18-99)||(25848009-25848089)
chr3 (38-110)||(4984577-4984649)
chr3 (18-110)||(20813122-20813214)
chr3 (18-66)||(35425310-35425358)
chr3 (18-110)||(38172340-38172432)
chr3 (34-110)||(44224754-44224830)
chr3 (18-110)||(53074879-53074970)
chr3 (34-110)||(3348235-3348311)
chr3 (18-66)||(30811608-30811656)
chr3 (18-110)||(42318306-42318397)
chr3 (18-110)||(53179825-53179916)
chr3 (19-118)||(23207093-23207190)
chr3 (18-108)||(10334114-10334204)
chr3 (18-103)||(32357487-32357572)
chr3 (19-100)||(38125485-38125565)
chr3 (18-66)||(8424806-8424854)
chr3 (18-66)||(16246171-16246219)
chr3 (18-70)||(22736957-22737009)
chr3 (18-66)||(48189518-48189566)
chr3 (19-102)||(30809986-30810069)
chr3 (18-69)||(45423842-45423893)
chr3 (18-110)||(38340782-38340873)
chr3 (18-110)||(21224966-21225058)
chr3 (18-110)||(50664735-50664826)
[»] chr7 (30 HSPs)
chr7 (18-110)||(37562567-37562659)
chr7 (19-116)||(42904551-42904648)
chr7 (18-110)||(3622480-3622572)
chr7 (18-110)||(12632103-12632195)
chr7 (18-110)||(38230065-38230157)
chr7 (18-110)||(44967419-44967511)
chr7 (19-110)||(34010338-34010428)
chr7 (18-110)||(3342787-3342879)
chr7 (18-70)||(9456102-9456154)
chr7 (18-108)||(34366004-34366093)
chr7 (18-110)||(36920198-36920290)
chr7 (18-70)||(43631755-43631807)
chr7 (18-110)||(46541598-46541689)
chr7 (18-110)||(47217561-47217653)
chr7 (18-110)||(39391157-39391249)
chr7 (18-70)||(43737999-43738051)
chr7 (18-68)||(386543-386592)
chr7 (18-103)||(32205924-32206007)
chr7 (33-110)||(48459722-48459799)
chr7 (18-110)||(3375487-3375579)
chr7 (18-90)||(19095934-19096005)
chr7 (18-110)||(32186937-32187029)
chr7 (18-110)||(41715654-41715746)
chr7 (18-70)||(42740389-42740441)
chr7 (18-70)||(48134577-48134629)
chr7 (19-110)||(3750684-3750775)
chr7 (19-70)||(37639428-37639479)
chr7 (18-65)||(47301622-47301669)
chr7 (37-97)||(34010994-34011054)
chr7 (74-110)||(42752211-42752247)
[»] chr6 (11 HSPs)
chr6 (19-110)||(29409284-29409375)
chr6 (18-110)||(16442383-16442475)
chr6 (19-110)||(13739183-13739273)
chr6 (19-110)||(13744683-13744773)
chr6 (18-110)||(16548115-16548207)
chr6 (18-110)||(33899038-33899130)
chr6 (19-70)||(10826068-10826119)
chr6 (18-70)||(31132440-31132492)
chr6 (19-110)||(6208096-6208186)
chr6 (19-70)||(7215552-7215603)
chr6 (19-70)||(21455859-21455910)
[»] scaffold0369 (1 HSPs)
scaffold0369 (18-110)||(8425-8517)
[»] scaffold0381 (1 HSPs)
scaffold0381 (18-67)||(9087-9136)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-66)||(29199-29247)


Alignment Details
Target: scaffold0005 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 253104 - 253204
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||||    
T  253104 caattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaa 253203  T
Q  118 c 118  Q
    |    
T  253204 c 253204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 14564271 - 14564171
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||||    
T  14564271 caattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaa 14564172  T
Q  118 c 118  Q
    |    
T  14564171 c 14564171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 4954175 - 4954084
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||||||  || ||||  |||||||||||||||||||||| ||||||    
T  4954175 aattttgattcaacctatccaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaactca 4954084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 29149432 - 29149340
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||||||||||||| |||| |||| ||||||||||||  ||  |||| ||||||||||||||||||||| |||||||    
T  29149432 caattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 29149340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 39636746 - 39636838
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||  |||||||||||| || ||||| ||||||||||||||||   |  |||| |||||||||||||||||||||||||||||    
T  39636746 caattttgattcatactatccaaacaacatcaactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactca 39636838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 6138745 - 6138653
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || |||||||| |||||| ||||||   |  |||| |||||||||||||||||||||||||||||    
T  6138745 caattttcattcaaactatccaaacaacatcaactcatatgaatcatttttaaataagtgtatccaaacataaatcaattcacatccaactca 6138653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 13167486 - 13167578
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||||||||||||||  |||||  ||||||||||||||||||  |   |||| |||| |||||||||||||||| |||||||    
T  13167486 caattttgattcaatctatccaaacatcattaatacataagaatcacttttaaatgggtgtatccaaatataaatcaattcacattcaactca 13167578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 48550552 - 48550460
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || |||||||||||||||||| ||    |   ||| |||||||||||||||||||||||||||||    
T  48550552 caattttgattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtttatccaaacataaatcaattcacatccaactca 48550460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 49136483 - 49136575
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| ||  ||| ||||||| || ||||||||||||||||||||||  ||  |||| |||||||||||||||||||||| ||||||    
T  49136483 caattttgattaaaattattcaaacaacatcaactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcacatcaaactca 49136575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 43781642 - 43781552
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||||| | |  |||| ||||||| ||||||||||| || ||||||    
T  43781642 aattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatcaattcacctcaaactca 43781552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 49519706 - 49519783
Alignment:
Q  33 ctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||| || |||||||||||| |||||| | |  |||| ||||||||||| |||||||||||||||||    
T  49519706 ctatccaaacaatatcaattcataagaatcatttttaagcaagtgtatccaaacataaataaattcacatccaactca 49519783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 2175272 - 2175180
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || ||| ||| | |||||||||||| |||  | || |||||||||||||||||||||| ||||||    
T  2175272 caattttaattcaaactatccaaacaacatcaacccatcaaaatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactca 2175180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 16566266 - 16566358
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||| || | |||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  16566266 caattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactca 16566358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 25312676 - 25312768
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||| ||||||||||| |  || ||||||||||| ||||||||  |  |||| |||||| ||||||||||||||| ||||||    
T  25312676 caattttgattcaatgtatccaaacaacaacaattcataagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcacatctaactca 25312768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 26426239 - 26426187
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  26426239 caattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaa 26426187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 46830178 - 46830102
Alignment:
Q  34 tatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| || ||||||||||||||| ||||||   |  |||| |||||||||||||||||||||||||||||    
T  46830178 tatccaaacaacatcaactcataagaatcaattttaagaaagtgtatccaaacataaatcaattcacatccaactca 46830102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 51922901 - 51922993
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||||||| |||||||    |  |||| |||||||||||||||||| || |||||||    
T  51922901 caattttgattcaaactatccaaacaacatcaactcataagaattacttttagtaaagtgtatccaaacataaatcaattcagattcaactca 51922993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 54488566 - 54488658
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| |||  ||||||||||| || || | |||||||||||||||     ||||||||||||||||||||||||||||| |||||||    
T  54488566 caattttgatccaagttatccaaacaaaatgaatttataagaatcacttttgctttaaggtattcaaacataaatcaattcacattcaactca 54488658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 46926010 - 46926101
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||  |||  ||| || ||||| |||||| |||||||||||| |||  |||| |||||||||||||||||||||| ||||||    
T  46926010 aattttgattcaaaatatataaataaaattaattcataaaaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactca 46926101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 54150487 - 54150579
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| ||| ||||||||||| |  |||| |||||||||| |||||| ||||| |||| |||||| ||||||||||||||| ||||||    
T  54150487 caattttgatttaatgtatccaaacaacaccaacttataagaatcatttttaa-cgaagtgtatccaaacaaaaatcaattcacatctaactca 54150579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 43772248 - 43772156
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||   ||||||||||| || ||||| |||||||||||| |||   |  |||| |||||||||||| ||||||||||||||||    
T  43772248 caattttgattcatattatccaaacaacatcaactcgtaagaatcacttctaaaaaagtgtatccaaacataaatcgattcacatccaactca 43772156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 48550178 - 48550270
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| || ||||||||||||||||||| || ||||| |||| ||||||||  ||  | || |||||||||||||||| ||||| ||||||    
T  48550178 caattttaatccaatctatccaaacaatatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactca 48550270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 48908236 - 48908326
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || |||| ||| |||| |||||||| || |||||| ||||||| || ||||||||||| ||||||    
T  48908236 caattttgattcaagctatccaaacaacatcaacttatatgaattacttttaagcg-aggtatccaaacat-aaccaattcacatcaaactca 48908326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 26403066 - 26402984
Alignment:
Q  17 acaattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattca 99  Q
    |||||| ||||||||  ||| ||||||| ||||| |||||||||| ||||||||   || | |||||||||||||||||||||    
T  26403066 acaattatgattcaaaatatacaaacaaaattaattcataagaattacttttaaagaaatggattcaaacataaatcaattca 26402984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 28986982 - 28987071
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||| ||||||  ||||  ||  |||||||||||| ||||||||||| || ||||||    
T  28986982 caattttgattcaaactatccaaacaacatcaactcataaaaatcac--ttaagtgagtgtattcaaacat-aatcaattcacctcaaactca 28987071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 6505162 - 6505262
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaa 117  Q
    ||||||||| | || |||||||||||| || || |||| | |||||||||||   ||  ||||  ||||||||||||||||||||| ||||||| |||||    
T  6505162 caattttgacttaaactatccaaacaacatcaagtcatgataatcacttttatatgagtgtatctaaacataaatcaattcacatcaaactcatttttaa 6505261  T
Q  118 c 118  Q
    |    
T  6505262 c 6505262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 9893672 - 9893764
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| ||| || |||||||||||| || ||||||||||||||||||| ||  |   |||| |||||||| ||||||||| ||| ||||||    
T  9893672 caattttaatttaaactatccaaacaacatcaactcataagaatcactttcaagtgggtgtatccaaacatatatcaattcatatctaactca 9893764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 14072464 - 14072512
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    |||||||||||||| |||||||||||| || ||||||| ||||||||||    
T  14072464 caattttgattcaaactatccaaacaacatcaactcattagaatcactt 14072512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 30842093 - 30842184
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||  | || ||||||||||||||||||| || | |  |||| ||||||| ||||||||||| || ||||||    
T  30842093 caattttgattcaaactatccaaatgaaatcaactcataagaatcactttcaaacaagtgtatccaaacat-aatcaattcacctcaaactca 30842184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 38305972 - 38306064
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| |||  ||||||||||| || || | |||||||||||||||     ||||||| ||||||||||||||||| ||| |||||||    
T  38305972 caattttgatccaagttatccaaacaacatgaatttataagaatcacttttgctttaaggtatccaaacataaatcaattcgcattcaactca 38306064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 42945023 - 42944931
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| ||  |||||||||||| || ||| ||||||||||||||||||   |   |||  |||||||||||||||||||| |||||||    
T  42945023 caattttgatacatactatccaaacaacatcaacacataagaatcacttttaagtaagtatatctaaacataaatcaattcacattcaactca 42944931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 48407822 - 48407731
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||  | || ||||||||||||||||||| || | |  |||| ||||||| ||||||||||| || ||||||    
T  48407822 caattttgattcaaactatccaaatgaaatcaactcataagaatcactttcaaacaagtgtatccaaacat-aatcaattcacctcaaactca 48407731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 54153006 - 54153097
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||| ||||||| || ||||||| |||||||||| ||    |  |||||||||||| ||||||||||||| |||||||    
T  54153006 caattttgattcaaactattcaaacaacatcaactcatgagaatcacttctagtaaagtgtattcaaacat-aatcaattcacattcaactca 54153097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 56241960 - 56241868
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| ||   ||| ||||| ||| |||||||||||||||||||||    || |||| |||||||||||||||||| ||| ||||||    
T  56241960 caattttgatttaaatcatctaaacattatcaactcataagaatcacttttacattaatgtatccaaacataaatcaattcatatcaaactca 56241868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 30887278 - 30887227
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactttta 69  Q
    |||||||||| ||| | |||||||||  ||||||||||||||||||||||||    
T  30887278 caattttgatacaaaccatccaaacatcattaactcataagaatcactttta 30887227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 55638912 - 55638861
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactttta 69  Q
    |||||||||||||   |||||||||||||| |||||||||||||| ||||||    
T  55638912 caattttgattcatattatccaaacaatatcaactcataagaatccctttta 55638861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 38263890 - 38263952
Alignment:
Q  48 taactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| |||||||||||  ||   ||||||||||||||| |||||||||| ||||||    
T  38263890 taactcataagtatcacttttaagtgagtatattcaaacataaattaattcacatcaaactca 38263952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 9889459 - 9889410
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttt 67  Q
    ||||||| |||||| |||||||||||| ||  ||||||||||||||||||    
T  9889459 caattttaattcaaactatccaaacaacatctactcataagaatcacttt 9889410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 32238180 - 32238135
Alignment:
Q  21 ttttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    ||||||||||| |||||||||||| || |||||||| |||||||||    
T  32238180 ttttgattcaaactatccaaacaacatcaactcatatgaatcactt 32238135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 33574199 - 33574231
Alignment:
Q  78 tattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||||||||||||| |||||||    
T  33574199 tattcaaacataaatcaattcacattcaactca 33574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 41866179 - 41866207
Alignment:
Q  82 caaacataaatcaattcacatccaactca 110  Q
    |||||||||||||||||||||||||||||    
T  41866179 caaacataaatcaattcacatccaactca 41866207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 440311 - 440214
Alignment:
Q  21 ttttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaac 118  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||| |||||||    
T  440311 ttttgattcaatctatccaaacaacgttaactcataagaatcatttttaactgaatgtatccaaacataaatcaattcacatccaactcacatttaac 440214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 3097331 - 3097239
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||  ||   ||| |||||||||||||||||| ||| ||||||    
T  3097331 caattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacataaatcaattcatatcaaactca 3097239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 33627157 - 33627067
Alignment:
Q  20 attttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||    |  |||| |||||||||||||||||  ||||||||||    
T  33627157 attttgattcaaactatccaaacaacattaactcataagaatcacttttagtaaagtgtatccaaacataaatcaattcttatccaactca 33627067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 6399233 - 6399141
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| ||  ||||||||||| || ||||||||||||||||||||||  ||  ||||  ||||||||||||||||||||| ||||||    
T  6399233 caattttgattaaaattatccaaacaacatcaactcataagaatcacttttaagtgagtgtatcgaaacataaatcaattcacatcaaactca 6399141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 25698084 - 25697993
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||   |   ||| ||||||| |||||||||||||||||||||    
T  25698084 caattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaacat-aatcaattcacatccaactca 25697993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 36114165 - 36114093
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataa 90  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||||| |||  |||| |||||||||    
T  36114165 caattttgattcaaattatccaaacaatatcaactcataagaatcacttttaaacgagtgtatccaaacataa 36114093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 3467517 - 3467609
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||| ||| || || |||||||||||||||||||   ||  ||| |||||| |||||||||||||| |||||||    
T  3467517 caattttgattcaaactatccaaccaacatcaattcataagaatcacttttaaataaatatatccaaacagaaatcaattcacattcaactca 3467609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 8124955 - 8125046
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||||||||||  | ||||| ||||||||||||||||  ||  |||| ||||||| |||||||||||||| ||||||    
T  8124955 caattttgattcaaactatccaaacaacttcaactcctaagaatcacttttaaatgagtgtatccaaacat-aatcaattcacatcaaactca 8125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 27649730 - 27649782
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  27649730 caattttgattcaaactatccaaacaacatcaactcataagaatcacttttaa 27649782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 28425597 - 28425505
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||||||||||  | |||||||||||||||||| |||   |  |||| ||||||||||||||||||| || ||||||    
T  28425597 caattttgattcaaactatccaaacaacgtcaactcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactca 28425505  T

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Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 43550875 - 43550967
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||  ||||||||||| || ||| || |||||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  43550875 caattttgattcaaattatccaaacaacatcaacccacaagaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactca 43550967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 40742125 - 40742200
Alignment:
Q  35 atccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| ||||||||||||||| |||||    |  |||| |||||||||||||||||||||||||||||    
T  40742125 atccaaacaatatcaactcataagaatcaattttattaaagtgtatccaaacataaatcaattcacatccaactca 40742200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 44926826 - 44926916
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| ||||||||| || || |||||||||||||||||||||| | |  |||| ||||||| ||||||||||| || ||||||    
T  44926826 aattttgattcaaactatccaaataacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatcaattcacctcaaactca 44926916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 31246440 - 31246348
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| |||  ||||||||||| || || | |||||||||||||||     ||||||| ||||||||||||||||||||| |||||||    
T  31246440 caattttgatccaagttatccaaacaacatgaatttataagaatcacttttgctttaaggtatccaaacataaatcaattcacattcaactca 31246348  T

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Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 41289183 - 41289091
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || |||  ||||||||||||||||    |  |||| ||||||||||||||||||||  |||||||    
T  41289183 caattttgattcaaactatccaaacaacatcaacctataagaatcacttttagtaaagtgtatccaaacataaatcaattcacaatcaactca 41289091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 41981141 - 41981192
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactttta 69  Q
    ||||||||||||||  ||||||||||| || |||||||||||||||||||||    
T  41981141 caattttgattcaaagtatccaaacaacatcaactcataagaatcactttta 41981192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 24897710 - 24897621
Alignment:
Q  20 attttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||  ||||||||||| || ||||||||||||||| ||||||   || |||| ||||||||| || ||||| ||||||||||    
T  24897710 attttgattcaaattatccaaacaacatcaactcataagaatcaattttaaataaatgtatccaaacataattc-attcatatccaactca 24897621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 29023223 - 29023304
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattca 99  Q
    |||||||||||||| |||||||||||| || ||||||||| ||||| |||||| | |  |||| |||| ||||| |||||||    
T  29023223 caattttgattcaaactatccaaacaacatcaactcataacaatcaattttaaacaagtgtatccaaatataaaccaattca 29023304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 22936914 - 22936826
Alignment:
Q  22 tttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| |||||||||||| || ||  || ||||||||||| |||   |  |||| ||||||||||||||||||||| |||||||    
T  22936914 tttgattcaaactatccaaacaacatcaatccacaagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactca 22936826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 42148989 - 42149081
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||  |||| |||||| || |||||||| |||||||||||||   |   ||| ||||||||||||||||||| || ||||||    
T  42148989 caattttgattcaaattatctaaacaacatcaactcatacgaatcacttttaaataagtctatccaaacataaatcaattcacctcaaactca 42149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 45147375 - 45147323
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||||  ||| |||||||||| |||| |||||||||||||||||    
T  45147375 caattttgattcaagttattcaaacaatatcaacttataagaatcacttttaa 45147323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 38114460 - 38114518
Alignment:
Q  49 aactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaact 108  Q
    ||||||||||||||||||  ||||||  |||| ||||||| |||||||||||||||||||    
T  38114460 aactcataagaatcacttgaaaccgagtgtatccaaacat-aatcaattcacatccaact 38114518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 15206695 - 15206772
Alignment:
Q  33 ctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||| || || |  |||||||||||| |||   || |||| ||||||||||||||||||||| |||||||    
T  15206695 ctatccaaacaacatgaatttttaagaatcacttctaagtcaatgtatccaaacataaatcaattcacattcaactca 15206772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 26243139 - 26243200
Alignment:
Q  49 aactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||||||||||| | |   ||| |||||||||||||||||| ||| ||||||    
T  26243139 aactcataagaatcacttttaaacaattatatccaaacataaatcaattcatatcaaactca 26243200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 4369928 - 4369843
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatc 103  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||  || ||||  ||||||||||||||||||||||    
T  4369928 caattttgattcaacctatccaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatc 4369843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 7826480 - 7826395
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatc 103  Q
    |||||||||||||| |||||||||||| || || |||||||||||||||||||  || ||||  ||||||||||||||||||||||    
T  7826480 caattttgattcaacctatccaaacaacatcaattcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatc 7826395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 5410640 - 5410731
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||| |||||||| |||||||||||| || || |||||||||||||||||||  | || ||||||||||||||||||||| ||||||||||||    
T  5410640 caattatgattcaaactatccaaacaacatcaagtcataagaatcacttttaa--gtagtgtattcaaacataaatcaatttacatccaactca 5410731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 13055998 - 13056089
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||   ||| |||||||||||||||||||||||||  |||||||    
T  13055998 caatttttattcaaactatccaaacaatatcaactcataaaaatcacttttaa--taagcgtattcaaacataaatcaattcacactcaactca 13056089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 42850329 - 42850253
Alignment:
Q  34 tatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| || ||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||||||    
T  42850329 tatccaaacaacatcaactcataagaatcacttttaag-gaagtgtatccaaacataaatcaattcacatccaactca 42850253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 31223374 - 31223466
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || |||||||||||||||||| ||    |  |||| |||||||||||||||||||||||||||||    
T  31223374 caattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcacatccaactca 31223466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 43729003 - 43728912
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||   |   ||| ||||||| |||||||||||||||||||||    
T  43729003 caattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaacat-aatcaattcacatccaactca 43728912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 47123386 - 47123478
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| ||| ||||||||||| |  |||| ||||||||||||||||| ||||| |||| |||||| ||||||||||||||| ||||||    
T  47123386 caattttgatttaatgtatccaaacaacaccaacttataagaatcacttttaa-cgaagtgtatccaaacaaaaatcaattcacatctaactca 47123478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 35569328 - 35569236
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||| || | |||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  35569328 caattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactca 35569236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 45710049 - 45710140
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || |||||||||||||||||| ||    |  |||||||||||| ||||||||||||| |||||||    
T  45710049 caattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtattcaaacat-aatcaattcacatacaactca 45710140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 48510908 - 48511000
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| ||  |||| ||||||| || || ||||||||||||||||||| | |  |||| ||||||||||||||||||||| |||||||    
T  48510908 caattttgatacatactattcaaacaacatcaattcataagaatcacttttaagcaagtgtatccaaacataaatcaattcacattcaactca 48511000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 50406129 - 50406222
Alignment:
Q  17 acaattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||||| ||||||||||| |  |||| |||||||||| |||||| ||||| | || |||||| ||||||||||||||| ||||||    
T  50406129 acaattttgattcaatgtatccaaacaacaacaacttataagaatcatttttaa-cgaagtgcatccaaacaaaaatcaattcacatctaactca 50406222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 49243049 - 49243008
Alignment:
Q  77 gtattcaaacataaatcaattcacatccaactcatatttaac 118  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  49243049 gtattcaaacataaatcaattcacatccaactcatttttaac 49243008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 1199827 - 1199919
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||  || ||||||||||| |||   |  |||| ||||||||||||||||||||| |||||||    
T  1199827 caattttgattcaaactatccaaacaacatcaatccacaagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactca 1199919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 6166110 - 6166201
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||| |||||||| || ||||| ||||||||||||||||  ||  |||| ||||||| |||||||||| ||| ||||||    
T  6166110 caattttgattcaaactacccaaacaacatcaactcctaagaatcacttttaaatgagtgtatccaaacat-aatcaattcagatcaaactca 6166201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 6464608 - 6464656
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||    
T  6464608 caattttgattcaaactatccaaacaacatcaactcataagaatcactt 6464656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 11051436 - 11051345
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || ||||| |||||| || ||||||  |   ||||||||||||||||||||||||||| ||||||    
T  11051436 caatttttattcaaactatccaaacaacat-aactcttaagaaccatttttaagtgtgtgtattcaaacataaatcaattcacatcaaactca 11051345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 12468213 - 12468304
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||| ||||||||||||   |  |||| |||| ||||||||||| ||||| ||||||    
T  12468213 caattttgattcaaactatccaaacaa-atcaactcataaaaatcacttttaaaaaagtgtatccaaatataaatcaatttacatcaaactca 12468304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 20800403 - 20800311
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||| ||||||||| |||||||||||| || ||| || | |||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  20800403 caatattgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactca 20800311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 35536072 - 35536124
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||||  ||||||||||| || ||||||||||||||||||||||    
T  35536072 caattttgattcaaattatccaaacaacatcaactcataagaatcacttttaa 35536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 11023455 - 11023374
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcac 100  Q
    |||||||||||||| ||| ||||||||||| ||||| ||| ||| ||||||||  ||| |||| ||||||| |||||||||||    
T  11023455 caattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattgaatgtatccaaacat-aatcaattcac 11023374  T

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Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 15884226 - 15884319
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| ||| |||||||||||| || || | |||| |||||||||| ||   |  |||| |||||||||||||||||||||||||||||    
T  15884226 caattttgatccaaactatccaaacaacatgaatttataaaaatcactttttactttattgtatccaaacataaatcaattcacatccaactca 15884319  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 10470590 - 10470638
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    ||||||| |||||| |||||||||||| || ||||||||||||||||||    
T  10470590 caattttaattcaaactatccaaacaacatcaactcataagaatcactt 10470638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 12247420 - 12247511
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||  | ||||||||| || ||||||||| |||||||||||| | |  |||| ||||||| ||| |||| ||||||||||||    
T  12247420 caattttgattcaaattctccaaacaacatcaactcataaaaatcacttttaaacaagtgtatccaaacat-aattaatttacatccaactca 12247511  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 36205191 - 36205243
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||||||| |||||||| ||| ||| |||| ||||||||||||||||    
T  36205191 caattttgattcaaactatccaagcaacattcactcgtaagaatcacttttaa 36205243  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 13931623 - 13931721
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaa 117  Q
    |||||||||||||| |||||||||||| || ||||  |||||||||  |||||  ||   ||| ||||||| |||||||||||||| ||||||| |||||    
T  13931623 caattttgattcaaactatccaaacaacatcaacttgtaagaatcatgtttaagtgagtatatccaaacat-aatcaattcacatcaaactcatttttaa 13931721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 25061226 - 25061305
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaatt 97  Q
    ||||||||||||||  ||||||||||  || || | ||||||||||||||||    ||||||| ||||||||||||||||    
T  25061226 caattttgattcaaattatccaaacatcatcaattgataagaatcacttttatgttaaggtatccaaacataaatcaatt 25061305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 50977465 - 50977374
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||||||  |||||||| |||||||| |||   ||| |||| |||||||||| ||||||||| | ||||||    
T  50977465 caatttttattcaaactatccaaacaatatctactcataaaaatcacttgtaa--taagcgtatccaaacataaaacaattcacaccaaactca 50977374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 9447532 - 9447585
Alignment:
Q  17 acaattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||| |||||| |||||||||||| || |||||  |||||||||||||||    
T  9447532 acaattttaattcaaactatccaaacaacatcaactcgaaagaatcacttttaa 9447585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 26058241 - 26058326
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatc 103  Q
    ||||||| || |||||||||||||||| || || ||||| |||| ||||||||  ||  | || |||||||||||||||| |||||    
T  26058241 caattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatc 26058326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 27801767 - 27801686
Alignment:
Q  29 caatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||||| || || ||||| |||| ||||||||  ||  | || |||||||||||||||| ||||| ||||||    
T  27801767 caatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactca 27801686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 25230007 - 25230055
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    ||||||| |||||| |||||||||||| || |||| |||||||||||||    
T  25230007 caattttcattcaaactatccaaacaacatcaactaataagaatcactt 25230055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 3667844 - 3667936
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||||||||||||| |||| |||| ||||||||||||  ||  |||| ||||||||||||||||||||| |||||||    
T  3667844 caattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 3667936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 40885200 - 40885293
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaa-tcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||||||||||||| ||||||||| || |||||||||| | |  || | |||||||||||||||||||||||||||||    
T  40885200 caattttgattcaaactatccaaacaatatcaactcataaaaactcacttttaaacaagtgtgtccaaacataaatcaattcacatccaactca 40885293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 35760179 - 35760271
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||||||||||||| |||| |||| ||||| ||||||  ||  |||| ||||||||||||||||||||| |||||||    
T  35760179 caattttgattcaaactatccaaacaatatcaactaataaaaatcagttttaattgagtgtatccaaacataaatcaattcacattcaactca 35760271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 34107068 - 34106977
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||| ||||||| ||||| |||||||||| ||||||||  ||| ||||| |||||| |||||||||||||| ||||||    
T  34107068 aattttgattcaacctattcaaacaacattaattcataagaattacttttaaatgaatgtatttaaacattaatcaattcacatctaactca 34106977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 28869615 - 28869535
Alignment:
Q  28 tcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaact 108  Q
    |||| |||||||||||| || ||||||||||||||||||||||   |  |||||||||||||||||||| |||||||||||    
T  28869615 tcaaactatccaaacaacatcaactcataagaatcacttttaagtaagtgtattcaaacataaatcaatccacatccaact 28869535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 32454528 - 32454618
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||||| | |  |||| ||||||| ||||||||||| || ||||||    
T  32454528 aattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatcaattcacctcaaactca 32454618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 41740715 - 41740634
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattca 99  Q
    ||||||||||| || |||||||||||| || ||||||||| |||||||||||| | |  ||||||||||||||| |||||||    
T  41740715 caattttgatttaaactatccaaacaacatcaactcataacaatcacttttaaacaagtgtattcaaacataaaccaattca 41740634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 13253204 - 13253113
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||| ||||||| || ||||||||||||||||||||||  ||  |||| ||||||| |||||||||| || |||||||    
T  13253204 caattttgattcaaactattcaaacaacatcaactcataagaatcacttttaaatgagtgtatccaaacat-aatcaattcatattcaactca 13253113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 22482179 - 22482271
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||| || | |||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  22482179 caattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactca 22482271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 40791191 - 40791139
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  40791191 caattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaa 40791139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 42146298 - 42146350
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  42146298 caattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaa 42146350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 7386054 - 7385972
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcac 100  Q
    ||||||||||| ||  ||||||||||| || ||||||||||||||||||||||   |  ||||| ||||||||||||||||||    
T  7386054 caattttgatttaaattatccaaacaacatcaactcataagaatcacttttaaataagtgtatttaaacataaatcaattcac 7385972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 2430418 - 2430370
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||    
T  2430418 caattttgattcaaactatccaaacaacatcaactcataagaatcactt 2430370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 27021118 - 27021218
Alignment:
Q  18 caattttgattcaatct-atccaaacaatattaactcataagaatcacttttaaccgaaggtat-tcaaacataaatcaattcacatccaactcatattt 115  Q
    ||||||||||||||||| |||||||||| || ||||  ||||||||||||||||  ||  ||||  |||||||||||||||||||||  ||||||| |||    
T  27021118 caattttgattcaatcttatccaaacaacatcaacttctaagaatcacttttaagtga--gtataccaaacataaatcaattcacatttaactcattttt 27021215  T
Q  116 aac 118  Q
    |||    
T  27021216 aac 27021218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 39988072 - 39987997
Alignment:
Q  35 atccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| || ||||||||||||||||||||||   |  |||| ||||||||||||||||||| || ||||||    
T  39988072 atccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactca 39987997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 4292140 - 4292238
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaa 117  Q
    |||||||||||||  |||||||||||||| |||  | ||||||||||| |||   |  |||| ||||||||||||||||||||| ||||| || |||||    
T  4292140 aattttgattcaaattatccaaacaatatcaaccaacaagaatcacttctaattaagtgtatccaaacataaatcaattcacattcaacttatttttaa 4292238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 3060344 - 3060296
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttt 67  Q
    |||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  3060344 caattttgattcaaactatccaaacaaca-taactcataagaatcacttt 3060296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 40495479 - 40495388
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| || |||| ||||||| || ||||||||| ||||||||||||   |  |||| |||||||||||||||| ||||| ||||||    
T  40495479 caattttgatttaaactattcaaacaa-atcaactcataaaaatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactca 40495388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 5710507 - 5710416
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||||||  |||||||| |||||||| |||   ||| |||| |||||||||| ||||||||| | ||||||    
T  5710507 caatttttattcaaactatccaaacaatatctactcataaaaatcacttgtaa--taagcgtatccaaacataaagcaattcacaccaaactca 5710416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 8049173 - 8049081
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| ||   |||||||||| |  ||||||||||||||||||||||   |  |||| |||||||||||||||| || || ||||||    
T  8049173 caattttgatttaaatcatccaaacaacaacaactcataagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactca 8049081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 13676497 - 13676541
Alignment:
Q  16 cacaattttgattcaatctatccaaacaatattaactcataagaa 60  Q
    ||||||||||||||||||||||| ||||| ||||| | |||||||    
T  13676497 cacaattttgattcaatctatccgaacaacattaatttataagaa 13676541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 2213491 - 2213583
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||||||||||||| |||| |||| ||||||||||||  ||  |||| ||||||||||||||||||||| |||||||    
T  2213491 caattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 2213583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 28127410 - 28127318
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||||||||||||| |||| |||| ||||||||||||  ||  |||| ||||||||||||||||||||| |||||||    
T  28127410 caattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 28127318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 9988624 - 9988532
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || |||||||| |||||||||||||   |  |||| |||||||||||||||||||||||||||||    
T  9988624 caattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactca 9988532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 7472796 - 7472705
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||   |  |||| ||||||| |||||||||||||| ||||||    
T  7472796 caattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacat-aatcaattcacatcaaactca 7472705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 28641627 - 28641727
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaa 117  Q
    ||||||| ||||||  ||||||||||| || |||| |||| ||||||||||||  |||| ||  |||| |||||||||||||||||||||||| ||||||    
T  28641627 caattttaattcaacatatccaaacaacatcaacttataataatcacttttaaatgaagttacccaaatataaatcaattcacatccaactcacatttaa 28641726  T
Q  118 c 118  Q
    |    
T  28641727 c 28641727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 39141592 - 39141501
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||||||||| ||||||  ||  |||| ||||||| |||||||||| ||||||||||    
T  39141592 caattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaatgagtgtatccaaacat-aatcaattcatatccaactca 39141501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 28261280 - 28261371
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||| ||||||| || |||||||||||||||||| ||   ||  |||| |||| ||||||||||||||||||||||||    
T  28261280 aattttgattcaaactattcaaacaacatcaactcataagaatcacttctatgtgagagtatccaaatataaatcaattcacatccaactca 28261371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 1945162 - 1945070
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||| || | |||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  1945162 caattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactca 1945070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 25940364 - 25940272
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| || ||||||||| || | ||||||| |||||||| ||  |||  ||||||||| ||||||||||||||||| ||||||    
T  25940364 caattttgattcaaactgtccaaacaacatcatctcataataatcacttctatacgagtgtattcaaatataaatcaattcacatcaaactca 25940272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 31562807 - 31562755
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  31562807 caattttgattcaaattatccaaacaatataaactcataagaatcacttttaa 31562755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 23358243 - 23358316
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaa 91  Q
    |||||||||||||| |||||||||||| |||||||||| | |||||||||||| | |  |||| ||||||||||    
T  23358243 caattttgattcaaactatccaaacaacattaactcatcacaatcacttttaaacaagtgtatccaaacataaa 23358316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 3853885 - 3853977
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| ||  | | |||||||||| |||||   ||| |||| |||||||||||||||| |||| |||||||    
T  3853885 caattttgattcaaactatccaaacaacatagattgataagaatcaattttacatgaatgtatccaaacataaatcaatttacattcaactca 3853977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 5916364 - 5916273
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || |||||| | |||||||||||||   |  |||| ||||||| ||||||||||||| |||||||    
T  5916364 caattttgattcaaactatccaaacaacatcaactcacatgaatcacttttaataaagtgtatccaaacat-aatcaattcacattcaactca 5916273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 36312262 - 36312353
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || |||||| | |||||||||||||   |  |||| ||||||| ||||||||||||| |||||||    
T  36312262 caattttgattcaaactatccaaacaacatcaactcacatgaatcacttttaataaagtgtatccaaacat-aatcaattcacattcaactca 36312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 2234913 - 2234962
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcactttta 69  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  2234913 aattttgattcaaactatccaaacaaca-taactcataagaatcactttta 2234962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 32501971 - 32502052
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcac 100  Q
    |||||||||||||| ||| ||||||||||| ||||| ||| ||| ||||||||  ||| |||| ||||||| |||||||||||    
T  32501971 caattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattgaatgtatccaaacat-aatcaattcac 32502052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 44619182 - 44619104
Alignment:
Q  20 attttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattc 98  Q
    ||||| |||||| |||||||||||| || ||||||||| ||||| |||||| | |  |||| |||||||||||||||||    
T  44619182 attttaattcaaactatccaaacaacatcaactcataataatcatttttaaacaagtgtatccaaacataaatcaattc 44619104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 31224696 - 31224757
Alignment:
Q  49 aactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||||||||||    ||  ||| |||||||||||||||||||||||||||||    
T  31224696 aactcataagaatcacttttagtaaaatatatccaaacataaatcaattcacatccaactca 31224757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 42089652 - 42089603
Alignment:
Q  21 ttttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||| || ||||||||||| || ||||||||||||||||||||||    
T  42089652 ttttgattcgatttatccaaacaacatcaactcataagaatcacttttaa 42089603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 7296140 - 7296240
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaa 117  Q
    ||||||||| | || ||||||||| || || || |||| | |||||||||||   ||  |||| |||||||||||||||||||||| ||||||| |||||    
T  7296140 caattttgacttaaactatccaaataacatcaagtcatgataatcacttttatatgagtgtatccaaacataaatcaattcacatcaaactcatttttaa 7296239  T
Q  118 c 118  Q
    |    
T  7296240 c 7296240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 14821148 - 14821196
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    ||||||||||||||  ||||||||||| || ||||||||||||||||||    
T  14821148 caattttgattcaaaatatccaaacaacatcaactcataagaatcactt 14821196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 34997299 - 34997259
Alignment:
Q  78 tattcaaacataaatcaattcacatccaactcatatttaac 118  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  34997299 tattcaaacataaatcaattcacatccaattcatttttaac 34997259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 8170298 - 8170344
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcac 64  Q
    ||||||| |||||| |||||||||||| || ||||||||||||||||    
T  8170298 caattttaattcaaactatccaaacaacatcaactcataagaatcac 8170344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 11240693 - 11240747
Alignment:
Q  55 taagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactc 109  Q
    ||||||||| || |||  ||| |||||||||||||||||||||||||| ||||||    
T  11240693 taagaatcaattctaagtgaatgtattcaaacataaatcaattcacattcaactc 11240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 45714750 - 45714692
Alignment:
Q  59 aatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaa 117  Q
    ||||| ||||||| ||  |||| |||||||||||||||||||||| ||||||| |||||    
T  45714750 aatcatttttaacggagtgtatccaaacataaatcaattcacatcgaactcatttttaa 45714692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 42516098 - 42516007
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || |||||  |||||||| |||| |  ||   ||||||||||| |||||||||||||| ||||||    
T  42516098 caattttaattcaaactatccaaacaacatcaactcgaaagaatcattttttaatgagtatattcaaacat-aatcaattcacatcaaactca 42516007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 52966934 - 52966849
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatc 103  Q
    |||||||||||||| ||||| |||||| || ||||||||||||||||||||||  || ||||  ||||||||||||||||||||||    
T  52966934 caattttgattcaacctatctaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatc 52966849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 26519640 - 26519732
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||| ||||| ||||||||||||||| |||| |||| ||||||||||||  ||  |||| ||||||||||||||||||||| |||||||    
T  26519640 caattttgtttcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactca 26519732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 15511500 - 15511409
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||   ||| |||| |||||||||||||||||||| ||||||||    
T  15511500 caatttttattcaaactatccaaacaatatcaactcataaaaatcacttttaa--taagcgtatccaaacataaatcaattcacacccaactca 15511409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 31084184 - 31084275
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||| |||||||| ||||||||| ||||| || |||||||||||||||||||  |||| |||| ||||||||||||||||||||| |||||||    
T  31084184 caattatgattcaaactatccaaataatatcaagtcataagaatcacttttaa--gaagtgtatccaaacataaatcaattcacattcaactca 31084275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 31619011 - 31618930
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcac 100  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||| |||  ||  |||| |||||||||||||||||||    
T  31619011 aattttgattcaaactatccaaacaacatcaactcataagaatcacttctaagtgagagtatccaaacataaatcaattcac 31618930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 42475685 - 42475777
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||| ||||||||||| |  || ||||||||||| ||||||||  |  ||||||||||| ||||||||||||||| ||||||    
T  42475685 caattttgattcaatgtatccaaacaacaacaattcataagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcacatctaactca 42475777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 10853392 - 10853313
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaatt 97  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||  ||   ||| ||||||||||||||||    
T  10853392 caattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacataaatcaatt 10853313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 25848009 - 25848089
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattca 99  Q
    ||||||| |||||| |||||||||||| |  ||||||||||||||| ||||||  |||||||| ||||||||||||||||||    
T  25848009 caatttttattcaa-ctatccaaacaacacaaactcataagaatcatttttaagtgaaggtatccaaacataaatcaattca 25848089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 4984577 - 4984649
Alignment:
Q  38 caaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||  |||||||||||||||||| |||  |||| |||||||||||||||||||||| ||||||    
T  4984577 caaacaaaattaatgcataagaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactca 4984649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 20813122 - 20813214
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || |||||||||||||||||||| |   |   ||| |||||| ||||||||||| ||||||||||    
T  20813122 caattttgattcaaactatccaaacaacatcaactcataagaatcacttttgaataagtatatccaaacaaaaatcaattcaaatccaactca 20813214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 35425310 - 35425358
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  35425310 caattttgattcaaactatccaaacaatatcaactcataagaatcactt 35425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 38172432 - 38172340
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || |||||||||||||||||| ||    |  |||| ||||||||||||||||||||||| |||||    
T  38172432 caattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcacatcccactca 38172340  T

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Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 44224754 - 44224830
Alignment:
Q  34 tatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| || ||||||||||||||||||||||  ||  |||| |||||||||||||||||| ||| ||||||    
T  44224754 tatccaaacaacatcaactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcatatcaaactca 44224830  T

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Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 53074879 - 53074970
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| ||  |||||||||||||||||||||  ||  |||| ||||||| ||||||||||| || ||||||    
T  53074879 caattttgattcaaactatccaaacaacatccactcataagaatcacttttaagtgagtgtatccaaacat-aatcaattcacctcaaactca 53074970  T

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Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 3348235 - 3348311
Alignment:
Q  34 tatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| || ||||||||||||| ||||||||  |||| |||| |||||||||||||||| ||||||||||||    
T  3348235 tatccaaacaacatcaactcataagaattacttttaag-gaagtgtatccaaacataaatcaatttacatccaactca 3348311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 30811656 - 30811608
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    |||||||||||||| ||||||||||||||| || |||||||||||||||    
T  30811656 caattttgattcaaactatccaaacaatatcaagtcataagaatcactt 30811608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 42318306 - 42318397
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||| | || ||||||||||||||||||| || | |  |||| ||||||| ||||||||||| || ||||||    
T  42318306 caattttgattcaaactatccaaacgaaatcaactcataagaatcactttcaaacaagtgtatccaaacat-aatcaattcacctcaaactca 42318397  T

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Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 53179825 - 53179916
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| || |||||||||||| || ||||||||| ||||||||||||   |  |||| |||||||||||||||| ||||| ||||||    
T  53179825 caattttgatttaaactatccaaacaa-atcaactcataaaaatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactca 53179916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 23207190 - 23207093
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatatttaac 118  Q
    ||||||||||||| ||||| |||||| || ||||||||| |||||||| |||   |  |||| |||||||||||||||||||||| ||||||| ||||||    
T  23207190 aattttgattcaaactatc-aaacaacatcaactcataa-aatcacttgtaaaaaagtgtatccaaacataaatcaattcacatcaaactcatttttaac 23207093  T

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Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 10334114 - 10334204
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaact 108  Q
    |||||||||||||| ||||||||||||  | ||||||||||||| |||||||    |  |||| |||||||||||||||||| || |||||    
T  10334114 caattttgattcaaactatccaaacaacgtcaactcataagaattacttttagtaaagtgtatccaaacataaatcaattcatattcaact 10334204  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 32357487 - 32357572
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatc 103  Q
    ||||||| ||||||  || |||||||| || ||| ||||||||||||||||||  ||  || |||||||||||||||||| |||||    
T  32357487 caattttaattcaaagtacccaaacaacatcaacacataagaatcacttttaaatgagtgttttcaaacataaatcaatttacatc 32357572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 38125565 - 38125485
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcac 100  Q
    ||||||||||||| |||||||||| | || ||||||||||||||||||| || | |  |||| ||||||| |||||||||||    
T  38125565 aattttgattcaaactatccaaacgaaatcaactcataagaatcactttcaaacaagtgtatccaaacat-aatcaattcac 38125485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 8424854 - 8424806
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    |||||||||||||| |||| ||||||| || ||||||||||||||||||    
T  8424854 caattttgattcaaactattcaaacaacatcaactcataagaatcactt 8424806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 16246219 - 16246171
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    |||||||||||||| |||||||||||| || ||||| ||||||||||||    
T  16246219 caattttgattcaaactatccaaacaacatcaactcctaagaatcactt 16246171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 22736957 - 22737009
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||||||| | |||| ||||| |||||||||||| ||||||||||||    
T  22736957 caattttgattcaaaccatcccaacaacattaactcataataatcacttttaa 22737009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 48189566 - 48189518
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    ||||||| |||||| |||||||||||| || ||||||||||||||||||    
T  48189566 caattttaattcaaactatccaaacaacatcaactcataagaatcactt 48189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 30810069 - 30809986
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacat 102  Q
    ||||||||||||| |||||||||||  || || | |||||||||||||||||   |  ||| |||| |||||||||||||||||    
T  30810069 aattttgattcaaactatccaaacatcatcaatttataagaatcacttttaagtaagcgtaatcaatcataaatcaattcacat 30809986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 45423893 - 45423842
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactttta 69  Q
    |||||||||||||| |||||||||||| || || | ||||||||||||||||    
T  45423893 caattttgattcaagctatccaaacaacatgaattgataagaatcactttta 45423842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 38340782 - 38340873
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaagg-tattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| ||||||||||||  | |||| |||| ||| ||||||||   |||  ||| |||||||||||||||||||||||||||||    
T  38340782 caatttttattcaaactatccaaacaacgtcaacttataaaaattacttttaat--aagcatatccaaacataaatcaattcacatccaactca 38340873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 21224966 - 21225058
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| ||||| |||| | || ||||| |||||||| |||||||   |  |||| |||||||| ||||||| ||||| ||||||    
T  21224966 caattttgattcaaactatcaaaacgacatcaactcgtaagaatcgcttttaagaaagtgtatccaaacatatatcaatttacatcaaactca 21225058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 50664735 - 50664826
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| ||| || ||||| |||||| || ||||| |||||||||||| |||  |   |||| ||||||||||||||||||||| |||||||    
T  50664735 caattttaatttaaactatctaaacaacat-aactcttaagaatcacttctaagtgtgtgtatccaaacataaatcaattcacattcaactca 50664826  T

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Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 37562567 - 37562659
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || |||||||| |||||||||||||   |  |||| |||||||||||||||||||||||||||||    
T  37562567 caattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactca 37562659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 42904551 - 42904648
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactcatattta 116  Q
    |||||||||| ||  ||| ||||||| ||||| ||||||||||||||||||| |||  ||||  ||||||||||||||||||||| ||||||| ||||    
T  42904551 aattttgatttaaaatatacaaacaaaattaattcataagaatcacttttaaacgagtgtatcaaaacataaatcaattcacatctaactcattttta 42904648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 3622572 - 3622480
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| |  |||||||||||| || ||||| ||||||||||||||||   |  |||| |||||||||||||||||||||||||||||    
T  3622572 caattttgatttatactatccaaacaacatcaactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactca 3622480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 12632195 - 12632103
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| | || ||||||| || |||||||||||||||||||||| |||    | ||||||||||||||||||||||| ||||||    
T  12632195 caattttgattcaaacaattcaaacaacatcaactcataagaatcacttttaagcgagtacactcaaacataaatcaattcacatctaactca 12632103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 38230065 - 38230157
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||| || | |||||||||||||   || |||| ||||||||||||||||||||| |||||||    
T  38230065 caattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaaatgtatccaaacataaatcaattcacattcaactca 38230157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 44967511 - 44967419
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||  ||||||||||| || |||||||||||||||||| ||    |  |||||||||||||||||||||||||| |||||||    
T  44967511 caattttgattcaaattatccaaacaacatcaactcataagaatcacttctattaaagtgtattcaaacataaatcaattcacattcaactca 44967419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 34010338 - 34010428
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||||||||||| || |||||||||||| |||||||||  ||  |||||||||||| ||||| |||| ||||||||||    
T  34010338 aattttgattcaaactatccaaacaacatcaactcataagaaccacttttaaatgagtgtattcaaacat-aatcagttcatatccaactca 34010428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 3342787 - 3342879
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||| ||||||| || |||||||||||||||||| ||    |  |||| |||||||||||||||||| ||||||||||    
T  3342787 caattttgattcaaactattcaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcatatccaactca 3342879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 9456102 - 9456154
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  9456102 caattttgattcaaactatccaaacaagatcaactcataagaatcacttttaa 9456154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 34366093 - 34366004
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaag-gtattcaaacataaatcaattcacatccaact 108  Q
    ||||||| |||||| |||||||||||| || ||||||||| ||||||||||||   ||| |||| |||||||||||||||||||| ||||||    
T  34366093 caatttttattcaaactatccaaacaacatcaactcataaaaatcacttttaa--taagcgtatccaaacataaatcaattcacacccaact 34366004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 36920290 - 36920198
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||||| || |||||||| || |||||| ||||||||| |||||   || ||||||||||||||||||||| | ||| ||||||    
T  36920290 caattttgattcaatgtacccaaacaacatcaactcaaaagaatcacctttaattaaacgtattcaaacataaatcaatttatatctaactca 36920198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 43631807 - 43631755
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  43631807 caattttgattcaatatatccaaacaatatcaactcaaaagaatcacttttaa 43631755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 46541598 - 46541689
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||    |||  || ||||||||||| |||||||||| |||||||    
T  46541598 caattttgattcaatctatcaaaacaatatcaa-tcataagaatcacttttcggtgaatatactcaaacataaaccaattcacattcaactca 46541689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 47217653 - 47217561
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| |||||| |||||||||||| || ||| ||| | |||||||||||| |||  | || |||||||||||||||||||||| ||||||    
T  47217653 caattttaattcaaactatccaaacaacatcaacccatcaaaatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactca 47217561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 39391249 - 39391157
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||| ||||||| || || ||||||||||||||| |||   |  |||| ||||||||||||||||||| || ||||||    
T  39391249 caattttgattcaaactattcaaacaacatcaattcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactca 39391157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 43738051 - 43737999
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||||||| |||||||||||| ||  |||||||||||||||||||||    
T  43738051 caattttgattcaaactatccaaacaacatccactcataagaatcacttttaa 43737999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 386592 - 386543
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactttt 68  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||    
T  386592 caattttgattcaatctatccaaacaacatcaa-tcataagaatcactttt 386543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 32205924 - 32206007
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatc 103  Q
    |||||||||||||  ||||| |||||| || ||||||||||||||||||||||   |  |||| ||||||||||||||||||||||    
T  32205924 caattttgattcatactatc-aaacaacat-aactcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacatc 32206007  T

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Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 48459722 - 48459799
Alignment:
Q  33 ctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||| ||  | |||||||||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  48459722 ctatccaaacaacatccattcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacattcaactca 48459799  T

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Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 3375487 - 3375579
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| |||   |||||||||| ||  |||||||||||||||||||||  ||  |||| |||||| ||||||||||||| | ||||||    
T  3375487 caattttgatccaaatcatccaaacaacatcgactcataagaatcacttttaagtgagtgtatccaaacacaaatcaattcacaccaaactca 3375579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 19095934 - 19096005
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataa 90  Q
    ||||||||||||||  ||||||||||| || ||||||||||||||| |||||| |||  |||| |||||||||    
T  19095934 caattttgattcaaattatccaaacaacat-aactcataagaatcatttttaaacgagtgtatccaaacataa 19096005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 32186937 - 32187029
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| || |||||||||||||||| || || ||||| |||| ||||||||  ||  | || |||||||||||||||| ||||| ||||||    
T  32186937 caattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactca 32187029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 41715654 - 41715746
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| || |||||||||||||||| || || ||||| |||| ||||||||  ||  | || |||||||||||||||| ||||| ||||||    
T  41715654 caattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactca 41715746  T

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Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 42740389 - 42740441
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||| ||  ||||||||||||||| ||| ||||||||||||||||||    
T  42740389 caattttgatacatactatccaaacaatatcaacacataagaatcacttttaa 42740441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 48134577 - 48134629
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||||||| |||||||||||| || |||| |||| ||||||||||||    
T  48134577 caattttgattcaaactatccaaacaacatcaacttataaaaatcacttttaa 48134629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 3750684 - 3750775
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||| || |||||||||||| || || |||||||| ||| || ||    |  |||| |||||||||||||||||||||||||||||    
T  3750684 aattttgatttaaactatccaaacaacatcaattcataagattcaattatattaaagtgtatccaaacataaatcaattcacatccaactca 3750775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 37639428 - 37639479
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||| |||||||||||| || ||| || |||||||||||||||    
T  37639428 aattttgattcaaactatccaaacaacatcaacccacaagaatcacttttaa 37639479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 47301669 - 47301622
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcact 65  Q
    |||||||||||||| |||||||||||| || ||| |||||||||||||    
T  47301669 caattttgattcaaactatccaaacaacatcaacccataagaatcact 47301622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 34011054 - 34010994
Alignment:
Q  37 ccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaatt 97  Q
    |||||||| || ||||||||||||||||||||||  ||| || | ||||||||||| ||||    
T  34011054 ccaaacaacatcaactcataagaatcacttttaagtgaatgtttccaaacataaattaatt 34010994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 42752247 - 42752211
Alignment:
Q  74 aaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  42752247 aaggtatccaaacataaatcaattcacattcaactca 42752211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 29409375 - 29409284
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||||||||||| || ||||||||||||||| ||||||   |  |||| |||||||||||||||||||||| ||||||    
T  29409375 aattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaaaaactgtatccaaacataaatcaattcacatcaaactca 29409284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 16442475 - 16442383
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||| ||||||  |||||||||||||| |||||||| |||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  16442475 caattttcattcaaattatccaaacaatatcaactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacattcaactca 16442383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 13739183 - 13739273
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||||| | |  |||| ||||||| ||||||||||| || ||||||    
T  13739183 aattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatcaattcacctcaaactca 13739273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 13744683 - 13744773
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||||| | |  |||| ||||||| ||||||||||| || ||||||    
T  13744683 aattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatcaattcacctcaaactca 13744773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 16548115 - 16548207
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||| || | |||||||||||||   |  |||| ||||||||||||||||||||| |||||||    
T  16548115 caattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactca 16548207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 33899130 - 33899038
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||| || | ||||||||| |||||||||||||||||||||||||    |  |||| |||||||||||||||||| ||| ||||||    
T  33899130 caattttgatttaaaccatccaaacattattaactcataagaatcacttttacattagtgtatccaaacataaatcaattcatatcaaactca 33899038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 10826068 - 10826119
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  10826068 aattttgattcaaactatccaaacaaaatcaactcataagaatcacttttaa 10826119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 31132440 - 31132492
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||||||| |||||||||||| || ||| ||||||||||||||||||    
T  31132440 caattttgattcaaactatccaaacaacatcaacccataagaatcacttttaa 31132492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 6208186 - 6208096
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    ||||||||||||| ||||| |||||| || |||||||||||||||||||||    |  |||| ||||||| ||||||||||||| |||||||    
T  6208186 aattttgattcaaactatctaaacaacatcaactcataagaatcacttttagtaaagtgtatccaaacat-aatcaattcacattcaactca 6208096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 7215552 - 7215603
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    |||||||||||||| ||| ||||||| |||||||||| ||||||||||||||    
T  7215552 aattttgattcaatttatgcaaacaacattaactcatgagaatcacttttaa 7215603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 21455859 - 21455910
Alignment:
Q  19 aattttgattcaatctatccaaacaatattaactcataagaatcacttttaa 70  Q
    ||||||||||||| |||| ||||||| |||||||||| ||||||||||||||    
T  21455859 aattttgattcaaactatgcaaacaacattaactcatgagaatcacttttaa 21455910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 8425 - 8517
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttttaaccgaaggtattcaaacataaatcaattcacatccaactca 110  Q
    |||||||||||||| |||||||||||| || ||||||||| ||||| ||||||   |  |||| |||||||||||||||||||||| ||||||    
T  8425 caattttgattcaaactatccaaacaacatcaactcataaaaatcatttttaaaaaagtgtatccaaacataaatcaattcacatcaaactca 8517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 9087 - 9136
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcacttt 67  Q
    ||||||| |||||| |||||||||||| ||  ||||||||||||||||||    
T  9087 caattttaattcaaactatccaaacaacatctactcataagaatcacttt 9136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 29247 - 29199
Alignment:
Q  18 caattttgattcaatctatccaaacaatattaactcataagaatcactt 66  Q
    |||||||||||||| |||||||||||| || || |||||||||| ||||    
T  29247 caattttgattcaaactatccaaacaacatcaattcataagaataactt 29199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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