View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14366_low_46 (Length: 312)
Name: NF14366_low_46
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14366_low_46 |
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Alignment Details
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 13 - 294
Target Start/End: Original strand, 6969642 - 6969924
Alignment:
| Q |
13 |
taatactttaggttcttttgtaaattaaaatctcattttcatattggcctttacatgaggnnnnnnntaaataaatgaatgacacataaagaagcaccan |
112 |
Q |
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| T |
6969642 |
taatactttaggttcttttgtaaattaaaatctcattttcatattggcctttacatgaggaaaaaaataaataaatgaatgacacataaagaagcaccat |
6969741 |
T |
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| Q |
113 |
nnnnnnnataataaaagccagatctgatttcatcttatctgatgccttttcaatctttcctaagaccaaacaaaaaggaaatgatgtaatacaaacaagt |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6969742 |
tttttttataataaaagccagatctgatttcatcttatctgatgccttttcaatctttcctaagaccaaacaaaaaggaaatgatgtaatacaaacaagt |
6969841 |
T |
|
| Q |
213 |
ca-tgatccataatacctacccccaaataaccttaactcatttgctgcattttcttatatgtgtgactaagtgtggagtatga |
294 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6969842 |
cattgatccataatacctacccccaaataaccttaactcatttgctgcattttcttatatgtgtgactaagtgtggagtatga |
6969924 |
T |
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