View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14366_low_6 (Length: 689)

Name: NF14366_low_6
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14366_low_6
NF14366_low_6
[»] chr4 (1 HSPs)
chr4 (1-672)||(40823187-40823864)
[»] chr7 (38 HSPs)
chr7 (1-672)||(20289287-20289957)
chr7 (394-642)||(20279913-20280161)
chr7 (140-297)||(20062299-20062453)
chr7 (164-295)||(20279697-20279828)
chr7 (402-623)||(20167505-20167726)
chr7 (397-634)||(20244055-20244292)
chr7 (397-634)||(20248093-20248330)
chr7 (397-642)||(20295069-20295314)
chr7 (402-642)||(20061970-20062210)
chr7 (143-294)||(20303876-20304027)
chr7 (397-623)||(20264444-20264670)
chr7 (1-300)||(20284976-20285273)
chr7 (143-300)||(20294835-20294992)
chr7 (397-642)||(20274220-20274462)
chr7 (140-300)||(20231732-20231892)
chr7 (143-297)||(20167817-20167971)
chr7 (397-613)||(20231986-20232202)
chr7 (146-300)||(20243810-20243964)
chr7 (140-300)||(20264191-20264351)
chr7 (394-642)||(20304120-20304368)
chr7 (143-300)||(20273984-20274141)
chr7 (140-259)||(19939307-19939426)
chr7 (140-259)||(19970446-19970565)
chr7 (1-77)||(20062518-20062594)
chr7 (1-73)||(20303725-20303797)
chr7 (431-613)||(20285368-20285549)
chr7 (1-98)||(20168016-20168113)
chr7 (140-294)||(20005104-20005258)
chr7 (1-72)||(20264037-20264108)
chr7 (402-477)||(20004939-20005014)
chr7 (1-72)||(20231578-20231649)
chr7 (1-73)||(20005334-20005406)
chr7 (1-73)||(20294693-20294765)
chr7 (1-72)||(20243643-20243714)
chr7 (1-79)||(20273842-20273920)
chr7 (1-79)||(20279546-20279624)
chr7 (402-637)||(19939535-19939770)
chr7 (402-637)||(19970674-19970909)
[»] chr8 (2 HSPs)
chr8 (131-213)||(4159639-4159721)
chr8 (140-226)||(4130262-4130348)
[»] chr2 (5 HSPs)
chr2 (146-214)||(2716872-2716940)
chr2 (146-214)||(2723495-2723563)
chr2 (146-214)||(2745325-2745393)
chr2 (174-214)||(2704305-2704345)
chr2 (143-214)||(2711955-2712026)
[»] chr5 (1 HSPs)
chr5 (176-228)||(28859769-28859821)


Alignment Details
Target: chr4 (Bit Score: 588; Significance: 0; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 588; E-Value: 0
Query Start/End: Original strand, 1 - 672
Target Start/End: Complemental strand, 40823864 - 40823187
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagtgtgccttcctcatctaattttatagta 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40823864 ttggtatggctagaatctttggagggagagaagataagaccaatactattagggttgtcggaacttagtaagtgtgccttcctcatctaattttatagta 40823765  T
Q  101 aaatacttctcgtataatttattacataaaaaatacagcggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtcttta 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40823764 aaatacttctcgtataatttattacataaaaaatgcagcggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtcttta 40823665  T
Q  201 gctttggtgttttgatactagagattattagcaggagaagaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctcaa 300  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40823664 gctttggtgttttgatactagagattattagtgggagaagaaactcaagattttatgacaatgagcatgcactgacccttttaggatttgtaagcctcaa 40823565  T
Q  301 taattcnnnnnnnnn------acttattatgatctctcttttgctttttgttgatacaacttccaaatgtatgaacttttttatttaattaattatttgt 394  Q
    ||||||               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40823564 taattctttttttttttttttacttattatgatctctcttttgctttttgttgatacaacttccaaatgtatgaacttttttatttaattagttatttgt 40823465  T
Q  395 tttcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgt 494  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40823464 tttcatgtaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcgccataagtatgttgtaaggtgt 40823365  T
Q  495 atacacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctc 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40823364 atacacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctc 40823265  T
Q  595 ctccaagtcaacctgcatttatcttgaggcaaaatatgttgagttcaatgtctcacagagaaattcatagacgctatt 672  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  40823264 ctccaagtcaacctgcatttatcttgaggcaaaatatgttgagttcaatgtctcacaaagaaattcatagatgctatt 40823187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 451; Significance: 0; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 1 - 672
Target Start/End: Original strand, 20289287 - 20289957
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagtgtgccttcctcatctaattttatagta 100  Q
    ||||||||||||||||||| | ||||||||||||||  |  |||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||    
T  20289287 ttggtatggctagaatcttcgaagggagagaagatacagaaaatactataagggttgtcggaacttagtaagtgtgccttccttgtccaattttatagta 20289386  T
Q  101 aaatacttctcgtataatttattacataaaaaatacagcggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtcttta 200  Q
    ||||||||   | ||||| | ||||||||||||| ||| |||||||| || || ||||| || |||||||||||||||||||||||||||||||||||||    
T  20289387 aaatacttggagaataatatgttacataaaaaatgcagtggttatatatctcccgaatacgcaatgcaaggactgttttcagagaaatcagatgtcttta 20289486  T
Q  201 gctttggtgttttgatactagagattattagcaggagaagaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctcaa 300  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20289487 gctttggtgttttgttactagagattattagcgggagaagaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctcga 20289586  T
Q  301 taattcnnnnnnnnn-acttattatgatctctcttttgctttttgttgatacaacttccaaatgtatgaacttttttatttaattaattatttgttttca 399  Q
    ||||||          ||||| ||||||||||  ||| |||||||| |||||||||| ||||||| |||| ||||||||||| |||||||||||||||||    
T  20289587 taattccttttcttttacttaatatgatctct--tttcctttttgtcgatacaacttacaaatgtctgaaattttttatttacttaattatttgttttca 20289684  T
Q  400 tctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtataca 499  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20289685 tctaggtttggatacaatggaaggaaggcaatattttatcttttataaatacagaaatatatgatcctagtcaccataagtatgttgtaaggtgtataca 20289784  T
Q  500 cattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcctcca 599  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  20289785 cattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggctgcagtaatttctatgcttaacagcgaggctgaattacttcctcctcca 20289884  T
Q  600 agtcaacctgcatttatcttgaggcaaaatatgttgagttcaatgtctcacagagaaattcatagacgctatt 672  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||||    
T  20289885 agtcaacctgcatttatcttgaggcaaaatatgttgagtacaatgtctcacgaagaaagtcatagacgctatt 20289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 394 - 642
Target Start/End: Original strand, 20279913 - 20280161
Alignment:
Q  394 ttttcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtg 493  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||  ||||| || ||   || ||    
T  20279913 ttttcatttaggtctggatacaatggagggaaggaaatattttatctttaatagatccagaaatatatgatcatagtcatgataagaatatttcgagatg 20280012  T
Q  494 tatacacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcct 593  Q
      |||| || |||||  | |||||||||||    |||||||||||||||||||||||  ||||||||||||||||||||| ||||  || || |||||||    
T  20280013 cttacatataggactgttatgtgtacaagaatcggctgtagacaggcctaatatggctacagtaatttctatgcttaacaatgaggttgcatcacttcct 20280112  T
Q  594 cctccaagtcaacctgcatttatcttgaggcaaaatatgttgagttcaa 642  Q
    |||||||||||||||||||| ||| | |||||  ||||||||| |||||    
T  20280113 cctccaagtcaacctgcattcatcctaaggcagtatatgttgaattcaa 20280161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 140 - 297
Target Start/End: Complemental strand, 20062453 - 20062299
Alignment:
Q  140 ggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaa 239  Q
    ||||||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||   ||||||    
T  20062453 ggttatatgtctcctgaatacgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttgatacttgagattcttactgggagaa 20062354  T
Q  240 gaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcct 297  Q
    ||||||||||||||||||||||||||    | ||||| ||||||||||||||||||||    
T  20062353 gaaactcaagcttttatgacaatgag---actctgactcttttaggatttgtaagcct 20062299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 20279697 - 20279828
Alignment:
Q  164 atgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaagaaactcaagcttttatgacaatg 263  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  20279697 atgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcgttagcgggagaagaaactcaagcttttatgacaatg 20279796  T
Q  264 agcatgcactgacccttttaggatttgtaagc 295  Q
    ||||||| ||||  ||| ||||||||||||||    
T  20279797 agcatgctctgagtcttgtaggatttgtaagc 20279828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 402 - 623
Target Start/End: Complemental strand, 20167726 - 20167505
Alignment:
Q  402 taggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtatacaca 501  Q
    ||||| ||||||||||||||||||| ||| ||||||||| | |||||||||| |||||||||||||||||| ||||| ||| ||  |||||| ||||| |    
T  20167726 taggtatggatacaatggagggaagacaacattttatctctaatagatcaaggaatatatgatcctagtcatcataattatatttcaaggtgcatacata 20167627  T
Q  502 ttggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcctccaag 601  Q
    | |||||  |||||| |||||| |||||   ||| |||||   |||||| |||||||||||||||||||||||||| |||| || |||||||||||| ||    
T  20167626 taggactattgtgtgcacaagaacttgccaaagataggcccgctatggctgcagtaatttctatgcttaacagtgaaactgcatcacttcctcctcccag 20167527  T
Q  602 tcaacctgcatttatcttgagg 623  Q
    | |||||||||| ||| |||||    
T  20167526 taaacctgcattcatcctgagg 20167505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 397 - 634
Target Start/End: Original strand, 20244055 - 20244292
Alignment:
Q  397 tcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtat 496  Q
    |||| ||||| |||| ||||||||| |||| ||||||||| ||| | |||||||||||||||||||||| |||||| ||||| ||| ||  |||||| ||    
T  20244055 tcatttaggtatggacacaatggagtgaagacaatattttgtctctaatagatcaagaaatatatgatcatagtcatcataattatatttcaaggtgcat 20244154  T
Q  497 acacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcct 596  Q
    ||| || |||||  |||||| |||||| |||||   ||| ||||| | |||||| |||||||||||||||||||||||||| |||  |||||||||||||    
T  20244155 acatataggactattgtgtgcacaagaacttgccaaagataggcccactatggctgcagtaatttctatgcttaacagtgaaacttcattacttcctcct 20244254  T
Q  597 ccaagtcaacctgcatttatcttgaggcaaaatatgtt 634  Q
    || ||| |||||||||| ||| ||||| | ||||||||    
T  20244255 cctagtaaacctgcattcatcctgagggagaatatgtt 20244292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 397 - 634
Target Start/End: Original strand, 20248093 - 20248330
Alignment:
Q  397 tcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtat 496  Q
    |||| ||||| |||| ||||||||| |||| ||||||||| ||| | |||||||||||||||||||||| |||||| ||||| ||| ||  |||||| ||    
T  20248093 tcatttaggtatggacacaatggagtgaagacaatattttgtctctaatagatcaagaaatatatgatcatagtcatcataattatatttcaaggtgcat 20248192  T
Q  497 acacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcct 596  Q
    ||| || |||||  |||||| |||||| |||||   ||| ||||| | |||||| |||||||||||||||||||||||||| |||  |||||||||||||    
T  20248193 acatataggactattgtgtgcacaagaacttgccaaagataggcccactatggctgcagtaatttctatgcttaacagtgaaacttcattacttcctcct 20248292  T
Q  597 ccaagtcaacctgcatttatcttgaggcaaaatatgtt 634  Q
    || ||| |||||||||| ||| ||||| | ||||||||    
T  20248293 cctagtaaacctgcattcatcctgagggagaatatgtt 20248330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 397 - 642
Target Start/End: Original strand, 20295069 - 20295314
Alignment:
Q  397 tcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtat 496  Q
    |||| ||||| |||||||| ||||  || | ||||||| ||||| | ||||||||||||||||||||||||||| | ||||| ||  || | ||||  ||    
T  20295069 tcatttaggtctggatacagtggacagatgacaatattctatctctaatagatcaagaaatatatgatcctagtaatcataattacattttgaggtacat 20295168  T
Q  497 acacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcct 596  Q
    ||| || |||||| |||| || ||||| | |||||| || |||||   |||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  20295169 acatataggacttttgtgcgttcaagaacatgctgtggataggcccgctatggctgcagtaatttctatgcttaacagtgaggctgcattacttcctcct 20295268  T
Q  597 ccaagtcaacctgcatttatcttgaggcaaaatatgttgagttcaa 642  Q
    || ||| |||||||||| ||| |||||||| |||||||||||||||    
T  20295269 cctagtaaacctgcattcatcctgaggcaagatatgttgagttcaa 20295314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 402 - 642
Target Start/End: Complemental strand, 20062210 - 20061970
Alignment:
Q  402 taggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtatacaca 501  Q
    ||||| ||| |||||||||||||||  ||||||||||| || ||||||  |||||||||||||| |||||| |||||| || ||   || || ||||| |    
T  20062210 taggtatggttacaatggagggaagaaaatattttatccttaatagatacagaaatatatgatcatagtcatcataagaatatttcgagatgcatacata 20062111  T
Q  502 ttggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcctccaag 601  Q
    | |||||  | |||||||||||    || ||||||||||||||||||||  ||||||||||||||||||||||||||  || || |||||||||||||||    
T  20062110 taggactgttatgtgtacaagaatcggccgtagacaggcctaatatggctacagtaatttctatgcttaacagtgaggttgcatcacttcctcctccaag 20062011  T
Q  602 tcaacctgcatttatcttgaggcaaaatatgttgagttcaa 642  Q
    |||||||||||| ||| ||||||| ||| |||||| |||||    
T  20062010 tcaacctgcattcatcctgaggcagaatttgttgaattcaa 20061970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 143 - 294
Target Start/End: Original strand, 20303876 - 20304027
Alignment:
Q  143 tatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaagaa 242  Q
    |||||||| |||||||| || |||| |||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||||  ||||  |||||||||    
T  20303876 tatatgtctcctgaatacgcaatgcgaggacttttttcagagaaatcagatgtttttagctttggtgtattgattctagagatcgttagtgggagaagaa 20303975  T
Q  243 actcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaag 294  Q
    |||||||||||||||||||||||||||||| ||  ||| |||||||||||||    
T  20303976 actcaagcttttatgacaatgagcatgcaccgagtcttctaggatttgtaag 20304027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 397 - 623
Target Start/End: Original strand, 20264444 - 20264670
Alignment:
Q  397 tcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtat 496  Q
    |||| ||||| |||| ||||||||| |||| ||||||||| ||| | |||||||||||||||||||||| |||||| ||||| ||| ||  |||||| ||    
T  20264444 tcatttaggtatggacacaatggagtgaagacaatattttgtctctaatagatcaagaaatatatgatcatagtcatcataattatatttcaaggtgcat 20264543  T
Q  497 acacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcct 596  Q
    ||| ||||||||  |||||| |||||| |||||   ||| |||||   |||||| |||||||||||||||||||||||||| |||| || ||||||||||    
T  20264544 acatattggactattgtgtgcacaagaacttgccaaagataggcccgctatggctgcagtaatttctatgcttaacagtgaaactgcatcacttcctcct 20264643  T
Q  597 ccaagtcaacctgcatttatcttgagg 623  Q
    || ||| |||||||||| ||| |||||    
T  20264644 cctagtaaacctgcattcatcctgagg 20264670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 20284976 - 20285273
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagtgtgccttcctcatctaattttatagta 100  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||  ||| | ||||||||||||||||| | | || || ||| ||| || |||||    
T  20284976 ttggtatggttagaatctttggagggggagaagatcaggccaatactagaaggatagtcggaacttagtaagtatccttttcttatccaatattttagta 20285075  T
Q  101 a-aatacttctcgtataatttattacataaaaaatacagcggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtcttt 199  Q
      |||| ||   | ||||||| ||| ||   || | ||| || |||||||| || |||||||| ||||||||| | |||||||||||||||||| | |||    
T  20285076 gtaataattaaagaataattttttatattttaa-tgcagtggctatatgtctccggaatatgcaatgcaaggattattttcagagaaatcagattttttt 20285174  T
Q  200 agctttggtgttttgatactagagattattagcaggagaagaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctca 299  Q
    || |||||||||||||||||||||||| |||   ||||||| |||||| | ||||||||||||||||||   |||| |||||||||||||||| ||||||    
T  20285175 agttttggtgttttgatactagagattgttactgggagaaggaactcatgtttttatgacaatgagcat--tctgagccttttaggatttgtacgcctca 20285272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 143 - 300
Target Start/End: Original strand, 20294835 - 20294992
Alignment:
Q  143 tatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaagaa 242  Q
    |||||||| ||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| | ||||||| |    
T  20294835 tatatgtctcctgaatatgcaatgcaaggattattttcagagaaatcagatgtttttagctttggtgttttgatgctagagattgttaccgggagaagga 20294934  T
Q  243 actcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctcaa 300  Q
    ||||||  |||||||||  |||| || | ||||||||| |||||||||||||||||||    
T  20294935 actcaattttttatgactttgagaattctctgacccttataggatttgtaagcctcaa 20294992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 642
Target Start/End: Original strand, 20274220 - 20274462
Alignment:
Q  397 tcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtat 496  Q
    |||| ||||| ||||| ||||||||||||| |||||| |||||| | |||||||||| |||| ||||||||||||| ||| | ||  || ||||||  ||    
T  20274220 tcatttaggtatggatccaatggagggaagacaatatcttatctctaatagatcaaggaatagatgatcctagtcatcattattacattttaaggtacat 20274319  T
Q  497 acacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcct 596  Q
    |||||| ||||||||||||||||||||  |||||||||| ||||| | |||||| ||||| ||||||||||| ||||||||   || ||||||   | ||    
T  20274320 acacataggacttctgtgtgtacaagaaattgctgtagataggcccactatggctgcagtgatttctatgctgaacagtgaaggtgcattact---tgct 20274416  T
Q  597 ccaagtcaacctgcatttatcttgaggcaaaatatgttgagttcaa 642  Q
    || ||| |||||||||| ||| ||||||| |||||||||| |||||    
T  20274417 cccagtaaacctgcattcatcctgaggcagaatatgttgaattcaa 20274462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 20231732 - 20231892
Alignment:
Q  140 ggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaa 239  Q
    ||||| ||||| ||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||| | | ||||    
T  20231732 ggttacatgtctcctgaatatgcaatgcaaggattattttcagagaaatcagatgtttttagctttggtgtattgctactagagattgttatcggaagaa 20231831  T
Q  240 gaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctcaa 300  Q
    |||||||||| ||||||||| ||| ||||   |||| ||||||||||| ||||||||||||    
T  20231832 gaaactcaagtttttatgacgatgtgcataatctgagccttttaggatatgtaagcctcaa 20231892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 143 - 297
Target Start/End: Complemental strand, 20167971 - 20167817
Alignment:
Q  143 tatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaagaa 242  Q
    |||||||| || || ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| | ||||||| |    
T  20167971 tatatgtctcccgagtatgcaatgcaaggactattttcagagaaatcagatgtgtttagctttggtgttttgatattagagattgttaccgggagaagga 20167872  T
Q  243 actcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcct 297  Q
    ||||||| ||||| || ||||| ||||| |||| |||||| |||| |||||||||    
T  20167871 actcaagtttttacgaaaatgaacatgctctgagccttttgggatatgtaagcct 20167817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 397 - 613
Target Start/End: Original strand, 20231986 - 20232202
Alignment:
Q  397 tcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtat 496  Q
    |||| ||||| |||| ||||||||| |||| ||||||||| ||| | |||||||||||||||||||||| |||||| ||||| ||| ||  |||||| ||    
T  20231986 tcatttaggtatggacacaatggagtgaagacaatattttgtctctaatagatcaagaaatatatgatcatagtcatcataattatatttcaaggtgcat 20232085  T
Q  497 acacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcct 596  Q
    ||| || |||||  |||||| |||||| | ||| | ||| ||||| | ||||||  ||||||||||||||||||||||||| | |  |||||||||||||    
T  20232086 acatataggactattgtgtgcacaagaacgtgccggagataggcccactatggcttcagtaatttctatgcttaacagtgaaagttcattacttcctcct 20232185  T
Q  597 ccaagtcaacctgcatt 613  Q
    || ||| ||||||||||    
T  20232186 cctagtaaacctgcatt 20232202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 300
Target Start/End: Original strand, 20243810 - 20243964
Alignment:
Q  146 atgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaagaaact 245  Q
    ||||| ||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||| | | ||||||||||    
T  20243810 atgtctcctgaatatgcaatgcaaggattattttcagagaaatcagatgtttttagctttggtgtattgctactagagattgttatcggaagaagaaact 20243909  T
Q  246 caagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctcaa 300  Q
    |||| ||||||||  ||||||||   || | ||||||||||| ||||||||||||    
T  20243910 caagtttttatgatgatgagcataatcttagccttttaggatatgtaagcctcaa 20243964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 20264191 - 20264351
Alignment:
Q  140 ggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaa 239  Q
    ||||| ||||| || |||||||| ||||||||| | ||||||||||| |||||||| |||||||||||||| ||| ||||||||||| ||| | ||||||    
T  20264191 ggttacatgtctcccgaatatgcaatgcaaggattattttcagagaagtcagatgtttttagctttggtgtattgctactagagattgttatcgggagaa 20264290  T
Q  240 gaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctcaa 300  Q
    |||||||||| ||||||||  ||||||||   || |  |||||||||||||||||||||||    
T  20264291 gaaactcaagtttttatgatgatgagcataatcttagtcttttaggatttgtaagcctcaa 20264351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 394 - 642
Target Start/End: Original strand, 20304120 - 20304368
Alignment:
Q  394 ttttcatctaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtg 493  Q
    ||||||| ||||| |||||||||||||||||||  ||||| |||||||| ||||||| |||||||||||||| |||||| || |   || |  | || ||    
T  20304120 ttttcatttaggtctggatacaatggagggaagaaaatatgttatctttaatagatccagaaatatatgatcatagtcatcacaccaatatattgagatg 20304219  T
Q  494 tatacacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcct 593  Q
     ||||| || |||||  | |||||||||||    |||||||| || |||| ||||||  |||||||||||||||||| |||||||  || ||| ||||||    
T  20304220 catacatataggactgttatgtgtacaagaatcagctgtagatagacctactatggcgacagtaatttctatgcttatcagtgaggatgcatttcttcct 20304319  T
Q  594 cctccaagtcaacctgcatttatcttgaggcaaaatatgttgagttcaa 642  Q
    |||||||||||||| ||||| ||| ||||||| |||| ||||| |||||    
T  20304320 cctccaagtcaaccagcattcatcctgaggcagaatacgttgaattcaa 20304368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 143 - 300
Target Start/End: Original strand, 20273984 - 20274141
Alignment:
Q  143 tatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaagaa 242  Q
    |||||||| ||||||||||| ||||||||| | ||||| |||||  ||||||| |||||||||||||||||||| ||||||||| ||| | ||| |||||    
T  20273984 tatatgtctcctgaatatgcaatgcaaggattattttccgagaagacagatgtttttagctttggtgttttgatcctagagattcttaccgggaaaagaa 20274083  T
Q  243 actcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagcctcaa 300  Q
    ||||||| ||||| ||  |||  |||   |||| ||||||||||| ||||||||||||    
T  20274084 actcaagtttttacgaggatgcacataatctgagccttttaggatatgtaagcctcaa 20274141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 19939307 - 19939426
Alignment:
Q  140 ggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaa 239  Q
    ||||||||||| || |||||||| ||||||||||||||||| || ||||| ||||||||||||||||| |||||  | || |||||||||||  | ||||    
T  19939307 ggttatatgtctccagaatatgcaatgcaaggactgttttctgataaatctgatgtctttagctttggagttttacttcttgagattattagtggaagaa 19939406  T
Q  240 gaaactcaagcttttatgac 259  Q
    |||| |||||||||||||||    
T  19939407 gaaattcaagcttttatgac 19939426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 19970446 - 19970565
Alignment:
Q  140 ggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaa 239  Q
    ||||||||||| || |||||||| ||||||||||||||||| || ||||| ||||||||||||||||| |||||  | || |||||||||||  | ||||    
T  19970446 ggttatatgtctccagaatatgcaatgcaaggactgttttctgataaatctgatgtctttagctttggagttttacttcttgagattattagtggaagaa 19970545  T
Q  240 gaaactcaagcttttatgac 259  Q
    |||| |||||||||||||||    
T  19970546 gaaattcaagcttttatgac 19970565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20062594 - 20062518
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagtgtgc 77  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  20062594 ttggaatggctagaatctttggtggaagagaagatcaggccaatactactagggttgtcggaacttagtaagtgtgc 20062518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20303725 - 20303797
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagt 73  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||  |||||||||||||||||||||||    
T  20303725 ttggtatggctagaatctttggagggagagaaaatcaggccaatactaccagggttgtcggaacttagtaagt 20303797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 431 - 613
Target Start/End: Original strand, 20285368 - 20285549
Alignment:
Q  431 tattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtatacacattggacttctgtgtgtacaagagcttgct 530  Q
    |||||||||| | |||||||||| ||||||||||||||| || ||||| ||  || ||||||  ||||| || |||||| |||| |||||||| | ||||    
T  20285368 tattttatctctaatagatcaaggaatatatgatcctagccatcataattacattttaaggtacatacatataggacttttgtgcgtacaagaacatgct 20285467  T
Q  531 gtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcctccaagtcaacctgcatt 613  Q
    ||||| |||||  ||||||| || |||||||||||||||||||  ||  ||| ||||||| ||| ||| ||| ||||||||||    
T  20285468 gtagataggcc-catatggctgcggtaatttctatgcttaacaacgatgctgcattactttctcgtccgagtaaacctgcatt 20285549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 20168113 - 20168016
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagtgtgccttcctcatctaattttatag 98  Q
    |||||||||||||||||||||||||  | |||||| ||||||||||||  ||| |||| ||||||||||||||| |||||||| ||| ||| ||||||    
T  20168113 ttggtatggctagaatctttggaggaggtgaagatcaggccaatactagcaggattgttggaacttagtaagtgcgccttccttatccaatattatag 20168016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 140 - 294
Target Start/End: Complemental strand, 20005258 - 20005104
Alignment:
Q  140 ggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagcaggagaa 239  Q
    ||||||||| | || || ||||| ||||||||| | ||||| || |||||||| ||||| |||||||| |||||| || |||||||| ||||  | |||     
T  20005258 ggttatatggctccagagtatgcaatgcaaggagtattttcggataaatcagacgtcttcagctttggagttttgctaatagagattgttagtggaagac 20005159  T
Q  240 gaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaag 294  Q
    |||||||||||||||||||  ||||  || | ||||| || ||||||||||||||    
T  20005158 gaaactcaagcttttatgaacatgaaaattctctgactctcttaggatttgtaag 20005104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20264037 - 20264108
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaag 72  Q
    |||||||||||||||||||||||||  | |||||| ||||||||||||  ||| ||||||||||||||||||    
T  20264037 ttggtatggctagaatctttggaggaggtgaagatcaggccaatactagaaggattgtcggaacttagtaag 20264108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 477
Target Start/End: Complemental strand, 20005014 - 20004939
Alignment:
Q  402 taggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccata 477  Q
    |||| |||||| ||||||| ||||| ||||||||||||||| ||||| | |||||||||||||| |||||| ||||    
T  20005014 taggcttggattcaatggaaggaagacaatattttatctttgatagaaccagaaatatatgatcatagtcatcata 20004939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20231578 - 20231649
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaag 72  Q
    |||||||||||||||||||||||||  | |||||| |||||||||| |  ||| ||||||||||||||||||    
T  20231578 ttggtatggctagaatctttggaggaggtgaagatcaggccaataccagaaggattgtcggaacttagtaag 20231649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20005406 - 20005334
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagt 73  Q
    |||||||||| ||||||||||||| ||| |||||| | |||||||||   |||||||||||||| ||||||||    
T  20005406 ttggtatggccagaatctttggagtgagtgaagatcatgccaatactcaaagggttgtcggaacatagtaagt 20005334  T

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Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20294693 - 20294765
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagt 73  Q
    |||| |||||||||||||||||||| |||||| || ||||||||||||  ||| |||| ||||| ||||||||    
T  20294693 ttggaatggctagaatctttggaggcagagaacatcaggccaatactagcaggattgttggaacgtagtaagt 20294765  T

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Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20243643 - 20243714
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaag 72  Q
    ||||| |||||||||| ||||||||  | |||||| ||||||||||||  ||| ||||||||||||||||||    
T  20243643 ttggtctggctagaatatttggaggaggtgaagatcaggccaatactagaaggattgtcggaacttagtaag 20243714  T

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Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20273842 - 20273920
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagtgtgcct 79  Q
    |||||||||||||||||||||||||| |||| ||| ||| ||||||    ||  |||| ||||||||||||||||||||    
T  20273842 ttggtatggctagaatctttggagggggagacgatcaggtcaatacctccagaattgttggaacttagtaagtgtgcct 20273920  T

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Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20279546 - 20279624
Alignment:
Q  1 ttggtatggctagaatctttggagggagagaagataaggccaatactattagggttgtcggaacttagtaagtgtgcct 79  Q
    |||||||||||||||||||||||||| ||||  || ||| |||||||   ||  |||||||||| ||||||||||||||    
T  20279546 ttggtatggctagaatctttggagggggagacaatcaggtcaatacttccagaattgtcggaacatagtaagtgtgcct 20279624  T

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Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 637
Target Start/End: Original strand, 19939535 - 19939770
Alignment:
Q  402 taggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtatacaca 501  Q
    ||||| ||||| ||||||   |||||||||||| || |  | ||||||| |||||||||||||| ||  || ||||| ||| ||   ||||  |||||||    
T  19939535 taggtatggattcaatggcaagaaggcaatattctaccactgatagatccagaaatatatgatcatatccatcataaatatattacgaggtccatacaca 19939634  T
Q  502 ttggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcctccaag 601  Q
    | || ||||| |||||||| ||  || |  ||||||| ||||  ||||| || |||||||||||||| |||||||| | || |   |||||||||||||     
T  19939635 tagggcttctatgtgtacaggaattttccatagacagacctaccatggcggctgtaatttctatgctgaacagtgacattgtagatcttcctcctccaaa 19939734  T
Q  602 tcaacctgcatttatcttgaggcaaaatatgttgag 637  Q
      |||||||||| ||| ||| ||| |||||| ||||    
T  19939735 gaaacctgcattcatcctgaagcagaatatgctgag 19939770  T

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Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 637
Target Start/End: Original strand, 19970674 - 19970909
Alignment:
Q  402 taggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcaccataagtatgttgtaaggtgtatacaca 501  Q
    ||||| ||||| ||||||   |||||||||||| || |  | ||||||| |||||||||||||| ||  || ||||| ||| ||   ||||  |||||||    
T  19970674 taggtatggattcaatggcaagaaggcaatattctaccactgatagatccagaaatatatgatcatatccatcataaatatattacgaggtccatacaca 19970773  T
Q  502 ttggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcctcctccaag 601  Q
    | || ||||| |||||||| ||  || |  ||||||| ||||  ||||| || |||||||||||||| |||||||| | || |   |||||||||||||     
T  19970774 tagggcttctatgtgtacaggaattttccatagacagacctaccatggcggctgtaatttctatgctgaacagtgacattgtagatcttcctcctccaaa 19970873  T
Q  602 tcaacctgcatttatcttgaggcaaaatatgttgag 637  Q
      |||||||||| ||| ||| ||| |||||| ||||    
T  19970874 gaaacctgcattcatcctgaagcagaatatgctgag 19970909  T

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Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 4159721 - 4159639
Alignment:
Q  131 aaatacagcggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgtttt 213  Q
    |||| ||| ||||||||| | ||||||||||| ||| ||||||| ||||| |||||||||||||| | ||||||||| |||||    
T  4159721 aaatgcagtggttatatgccgcctgaatatgcaatggaaggacttttttctgagaaatcagatgtttatagctttggagtttt 4159639  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 4130348 - 4130262
Alignment:
Q  140 ggttatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagatt 226  Q
    ||||||||| | ||||||||||| |||   ||||| || ||||||||||||||||| | |||||||||||||||  | |||||||||    
T  4130348 ggttatatgccgcctgaatatgcaatggggggacttttctcagagaaatcagatgtatatagctttggtgttttattgctagagatt 4130262  T

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Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 2716940 - 2716872
Alignment:
Q  146 atgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttg 214  Q
    ||||| || |||||||| ||| ||||| |||||||||||||||||||||| ||||| ||||| ||||||    
T  2716940 atgtctccggaatatgcaatggaaggattgttttcagagaaatcagatgtatttagttttggggttttg 2716872  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 2723563 - 2723495
Alignment:
Q  146 atgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttg 214  Q
    ||||| || |||||||| ||| |||| ||||||||||||||||||||||| ||||| ||||| ||||||    
T  2723563 atgtctccggaatatgcaatggaagggctgttttcagagaaatcagatgtatttagttttggggttttg 2723495  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 2745393 - 2745325
Alignment:
Q  146 atgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttg 214  Q
    ||||| || |||||||| ||| |||| ||||||||||||||||||||||| ||||| ||||| ||||||    
T  2745393 atgtctccggaatatgcaatggaagggctgttttcagagaaatcagatgtatttagttttggggttttg 2745325  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 2704345 - 2704305
Alignment:
Q  174 tgttttcagagaaatcagatgtctttagctttggtgttttg 214  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  2704345 tgttttcagagaaatcagatgtttttagctttggggttttg 2704305  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 2712026 - 2711955
Alignment:
Q  143 tatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttg 214  Q
    |||||||| || |||||||| ||| ||||  |||||||||||||||||||| | ||||| ||||| ||||||    
T  2712026 tatatgtctccagaatatgcaatgaaagggttgttttcagagaaatcagatatttttagttttggagttttg 2711955  T

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Target: chr5 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 28859821 - 28859769
Alignment:
Q  176 ttttcagagaaatcagatgtctttagctttggtgttttgatactagagattat 228  Q
    ||||||| |||||||||||||||||| ||||||||| || | || ||||||||    
T  28859821 ttttcagtgaaatcagatgtctttagttttggtgttctggttcttgagattat 28859769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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