View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14366_low_69 (Length: 232)
Name: NF14366_low_69
Description: NF14366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14366_low_69 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 47625290 - 47625092
Alignment:
| Q |
14 |
cagcacagacaagagggagaaagattcttcagagaggtgcctgttgaagatcagctctatagttattcctccttcactggagctctccaaggtaccaatt |
113 |
Q |
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| T |
47625290 |
cagcacagacaagagggagaaagattcttcagagaggtgcctgttgaagatcagctctatagttattcctccttcactggagctctccaaggtaacaatt |
47625191 |
T |
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| Q |
114 |
accttcaatattaagagatgactctgtactctcagtggcatgacatgattttactatagctgtttaagctgctagattattgttgtttagtgtttatat |
212 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47625190 |
accttcaatattaagagatgactctgtactgtcagtggcatgacatgattttactatagctgtttaagctgctagattattgttgtttagtgtttatat |
47625092 |
T |
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