View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14367_high_2 (Length: 525)
Name: NF14367_high_2
Description: NF14367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14367_high_2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 424; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 5 - 525
Target Start/End: Original strand, 10562952 - 10563462
Alignment:
| Q |
5 |
gtttctccattcaacaatagtatccaaaaacgccgacaacaaaattaacttcaggaaatgagccattctaaaaatttagcaaatttaaagtaagagttta |
104 |
Q |
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| T |
10562952 |
gtttctccattcaacaatagtatccaaaaacgccgacaacaaaattaacttcaggaaatgagccattctaaaaatttagcaaatttaaagtaaaagttta |
10563051 |
T |
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| Q |
105 |
aggctatgtgtgtg--atggaactaagtggaacagatgggacacccctaaccaccaaatcatatcccaagtgaacaagcacttgttagaccacagaatga |
202 |
Q |
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| T |
10563052 |
aggctatgtgtgtgtgatggaactaagtggaaca-atgggacacccctaaccaccaaatcatatcccaagtgaacaagcacttgttagaccacagaatga |
10563150 |
T |
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| Q |
203 |
ggtaaaagaaaagtcaacaagtaaggtaagacaaaaggaggaaattcctagacacttctttttaactagccaatgaatcactatgaaacacgaacacaaa |
302 |
Q |
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| T |
10563151 |
ggtaaaagaaaagtcaacaagtaaggtaagacaaaaggaggaaattcctagacatttctttttaactagcccatgaatcactatgaaacacgaacacaaa |
10563250 |
T |
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| Q |
303 |
cacatggccggacaccagacaaaatgctgacaatgatatgtctagaccccaagtaattgaatgtaactacacgagatcacaagtaattgagtgtaactac |
402 |
Q |
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| T |
10563251 |
cacatggacggacaccagacaaaatgctgacaatgatatgtctagaccccaagtaattgaatgtaactacacgagatcacaagtaattgagtgtaactac |
10563350 |
T |
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| Q |
403 |
atgtgtaggtg-tgttttaatgtctaaaaccagacatgtcttaaatctgaagtgtcagtgctacatagtacataacatagaagctaatcacatatgagta |
501 |
Q |
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| T |
10563351 |
atgtgtaggtgttgttttaatgtctaaaaccagacatgtcttaaatccaaagtgtcggtgct------------acatagaagctaatcacatatgagta |
10563438 |
T |
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| Q |
502 |
gagacaagacaatataggtaacta |
525 |
Q |
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| T |
10563439 |
gagacaagacgatataggtaacta |
10563462 |
T |
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