View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14367_high_3 (Length: 486)
Name: NF14367_high_3
Description: NF14367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14367_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 36 - 480
Target Start/End: Original strand, 10563579 - 10564021
Alignment:
| Q |
36 |
gactaaacctggtcagaagtagtgctttggtgg---------cggcggcggcgaagaatagtgccaccatgtttgttcattttggcaaatggtgtatgtt |
126 |
Q |
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| T |
10563579 |
gactaaacctggtcagaagtagtgctttggtggtggagacggcggcggcggcgaagaatggtgccaccatgtttgttcattttggcaaatggtgtatgtt |
10563678 |
T |
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| Q |
127 |
gaatttgccaaaggttggcacaaagttttctagcagaaatggttgaagttgaaacaatgctattttgttgagatggagggtcaaatctccatgtggttga |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10563679 |
gaatttgccaaaggttggcacaaagttttctagcagaa---------gttgaaacaatgctattttgttgagatggagggtcaaatctccatgtggttga |
10563769 |
T |
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| Q |
227 |
tggagtactacaaactcctccccttttccctaccaaaacacctttcttccacttttcaaccattactattctctttttgtcccctctctcacacacaaaa |
326 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10563770 |
tggagtactacaaattcctccccttttccctaccaaaacacctttcttccacttttcaaccattactattctctttttgtcccctctctcacacacaaaa |
10563869 |
T |
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| Q |
327 |
ctcattgtttatgtttgaaaataaatttactttgttttaacaacaacagactttacaatgtttcttgttttctatgttctgcaggttccatcaacaagtt |
426 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10563870 |
ctcattgtttatgtttgaaaataaatttactttgttttaacaacaacagactttacaatgtttcttgttttctatgttctgcaggttccatcaacaagtt |
10563969 |
T |
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| Q |
427 |
atgtgttaccaaacttatttatagccacatcagcagttccttcttcgtatatag |
480 |
Q |
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| T |
10563970 |
a--tgttaccaaacttatttatagccacatcagcagttacttcttcgtatatag |
10564021 |
T |
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