View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14368_low_12 (Length: 358)
Name: NF14368_low_12
Description: NF14368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14368_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 311
Target Start/End: Original strand, 34439518 - 34439814
Alignment:
| Q |
21 |
ggaaaatgaggacaatgtggccgccatcggtaatattctgtgcttgaaaggtgggtagatacagagcttcagctcaagcttatatagactccaattttgg |
120 |
Q |
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| T |
34439518 |
ggaaaatgaggacaatgtggccgccatcggtaatattctgtgcttgaaaggtgggtagatagagagcgtcagttcaagcttatatagactccaattttgg |
34439617 |
T |
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| Q |
121 |
aaaccaaagaggacttgttacaagtctgaaattattcactaaaatggaccctcat------ctaaagagaggaacataataataaatacaatagataaat |
214 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| || |
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| T |
34439618 |
aaaccaaagaggacttgtcacaagtctgaaattattcactaaaatggaccctcattagacactaaagagaggaacgtaataataaatacaatagatagat |
34439717 |
T |
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| Q |
215 |
agatagagatagcaagaacacaagagttaaagtgtcgaattaatgaatgccccagagttatagacagggtgttcaaattcaaactgattcaaaatga |
311 |
Q |
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||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |
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| T |
34439718 |
agatagagataataagtacataagagttaaagtgtcgaattaatgaatgccggggagttatagatagggtgttcaaattcaaactgatccaaaatga |
34439814 |
T |
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