View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14368_low_18 (Length: 270)
Name: NF14368_low_18
Description: NF14368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14368_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 10321093 - 10321341
Alignment:
| Q |
17 |
aaaattaattattcccttgcaattaaactagtttatcatctattaaagtttttgtaaaaacatctaccnnnnnnngttttgtaaaa-attcatatattaa |
115 |
Q |
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| T |
10321093 |
aaaatttattattcccttgcaattaaactagtttatcatctattaaagtttttgtaaaaacatctaccaaaaaaagttttgtaaaaaattcatatattaa |
10321192 |
T |
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| Q |
116 |
agtgagtattaatttattcttttgaccaaattaaagttaaaaatatattaacttgttttatggtggacaaactacaacacct--aagatatataaaaata |
213 |
Q |
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| T |
10321193 |
agtgagtattaatttattcttttgaccaaattaaagttaaaaatatattaatttgttttatggtggacaaactacaacaccttatagatatataaaaata |
10321292 |
T |
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| Q |
214 |
aatggaaacaagaataaaaagagaaatggagcatagacaaattcttctc |
262 |
Q |
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| T |
10321293 |
aatggaaacaagaataaaaagagaaatggagcatagacaaattcttctc |
10321341 |
T |
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