View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14368_low_5 (Length: 509)

Name: NF14368_low_5
Description: NF14368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14368_low_5
NF14368_low_5
[»] chr5 (45 HSPs)
chr5 (1-490)||(38596517-38597007)
chr5 (1-274)||(38552029-38552296)
chr5 (1-320)||(38061067-38061390)
chr5 (351-488)||(43318047-43318184)
chr5 (349-488)||(32087512-32087651)
chr5 (351-488)||(18728589-18728726)
chr5 (351-487)||(35292370-35292505)
chr5 (350-466)||(38178102-38178218)
chr5 (350-466)||(38205326-38205442)
chr5 (351-488)||(35395333-35395470)
chr5 (369-485)||(24496761-24496877)
chr5 (351-470)||(33256400-33256519)
chr5 (361-475)||(17574328-17574442)
chr5 (418-490)||(38597012-38597084)
chr5 (361-475)||(36057613-36057727)
chr5 (361-475)||(7267853-7267967)
chr5 (361-475)||(30468280-30468394)
chr5 (349-442)||(32089925-32090018)
chr5 (351-442)||(33257760-33257851)
chr5 (347-442)||(40330515-40330610)
chr5 (361-475)||(2179797-2179911)
chr5 (359-440)||(32835884-32835965)
chr5 (393-486)||(34327677-34327770)
chr5 (361-457)||(24541230-24541326)
chr5 (361-440)||(21842992-21843071)
chr5 (361-440)||(30463910-30463989)
chr5 (359-442)||(42619297-42619380)
chr5 (361-458)||(8539685-8539782)
chr5 (349-442)||(18726563-18726656)
chr5 (366-442)||(38176647-38176723)
chr5 (366-442)||(38203871-38203947)
chr5 (359-442)||(1344814-1344897)
chr5 (361-440)||(2852896-2852975)
chr5 (400-475)||(29621781-29621856)
chr5 (361-475)||(2854327-2854440)
chr5 (361-475)||(18625008-18625122)
chr5 (366-444)||(24498065-24498143)
chr5 (400-457)||(42473625-42473682)
chr5 (361-440)||(12738736-12738815)
chr5 (361-440)||(12801559-12801638)
chr5 (362-457)||(27075831-27075926)
chr5 (400-475)||(40780599-40780674)
chr5 (348-442)||(35291045-35291139)
chr5 (282-320)||(38551975-38552013)
chr5 (400-440)||(7269446-7269486)
[»] chr7 (57 HSPs)
chr7 (350-486)||(33038786-33038922)
chr7 (351-488)||(23953805-23953942)
chr7 (350-487)||(46996690-46996827)
chr7 (348-488)||(47341673-47341813)
chr7 (351-470)||(2167479-2167598)
chr7 (359-488)||(38614899-38615027)
chr7 (351-464)||(38613492-38613605)
chr7 (351-488)||(46812569-46812706)
chr7 (346-470)||(8423286-8423410)
chr7 (351-477)||(40784346-40784472)
chr7 (359-470)||(27955378-27955489)
chr7 (393-470)||(35344295-35344372)
chr7 (357-460)||(2492333-2492436)
chr7 (359-442)||(45465184-45465267)
chr7 (361-457)||(29996532-29996628)
chr7 (359-442)||(38614792-38614875)
chr7 (359-442)||(46810713-46810796)
chr7 (361-475)||(39859229-39859343)
chr7 (359-442)||(30108573-30108656)
chr7 (359-442)||(35342433-35342516)
chr7 (359-442)||(36756883-36756966)
chr7 (359-442)||(36762680-36762763)
chr7 (359-442)||(36766407-36766490)
chr7 (401-475)||(6602385-6602459)
chr7 (361-475)||(27666065-27666179)
chr7 (361-456)||(56340-56435)
chr7 (346-442)||(4321033-4321129)
chr7 (407-475)||(34776915-34776983)
chr7 (361-440)||(13169683-13169762)
chr7 (361-440)||(33775418-33775497)
chr7 (349-456)||(45463668-45463775)
chr7 (348-442)||(23955285-23955379)
chr7 (393-475)||(24228409-24228491)
chr7 (361-475)||(38474143-38474257)
chr7 (393-442)||(8421458-8421507)
chr7 (400-456)||(11682830-11682886)
chr7 (359-442)||(33037701-33037785)
chr7 (426-486)||(35693359-35693419)
chr7 (350-442)||(46994659-46994751)
chr7 (359-442)||(3690158-3690241)
chr7 (361-440)||(35403619-35403698)
chr7 (361-440)||(39857655-39857734)
chr7 (361-475)||(37115526-37115640)
chr7 (392-457)||(366739-366804)
chr7 (414-475)||(20478105-20478166)
chr7 (407-468)||(45359392-45359453)
chr7 (361-440)||(6605397-6605476)
chr7 (361-440)||(13039642-13039721)
chr7 (407-470)||(19712268-19712331)
chr7 (361-440)||(27664440-27664519)
chr7 (357-456)||(34691001-34691100)
chr7 (361-440)||(35401979-35402058)
chr7 (407-470)||(37796186-37796249)
chr7 (359-442)||(40785548-40785631)
chr7 (345-442)||(2168834-2168931)
chr7 (361-434)||(46439539-46439612)
chr7 (407-475)||(1546343-1546411)
[»] chr3 (67 HSPs)
chr3 (349-488)||(48633875-48634014)
chr3 (348-486)||(40508900-40509038)
chr3 (351-488)||(31887439-31887576)
chr3 (349-470)||(33113185-33113306)
chr3 (349-467)||(23774150-23774268)
chr3 (345-488)||(18430258-18430401)
chr3 (349-470)||(45898353-45898474)
chr3 (350-470)||(24382898-24383018)
chr3 (351-476)||(23888771-23888896)
chr3 (351-470)||(41021008-41021127)
chr3 (348-469)||(2977335-2977456)
chr3 (351-470)||(45257225-45257344)
chr3 (363-488)||(33852657-33852782)
chr3 (345-470)||(39641844-39641969)
chr3 (351-488)||(51454237-51454374)
chr3 (361-475)||(53190779-53190893)
chr3 (361-486)||(30599927-30600052)
chr3 (361-475)||(54898447-54898561)
chr3 (361-486)||(21348733-21348858)
chr3 (361-485)||(2660222-2660346)
chr3 (359-442)||(23887206-23887289)
chr3 (364-475)||(35905732-35905843)
chr3 (359-442)||(45897058-45897141)
chr3 (359-442)||(48635373-48635456)
chr3 (361-475)||(2226172-2226286)
chr3 (361-475)||(27899101-27899215)
chr3 (348-442)||(33111838-33111932)
chr3 (361-475)||(41977760-41977874)
chr3 (406-470)||(1845839-1845903)
chr3 (349-442)||(1847645-1847738)
chr3 (362-442)||(2975471-2975551)
chr3 (361-440)||(3150262-3150341)
chr3 (365-424)||(24381758-24381817)
chr3 (361-468)||(43765147-43765254)
chr3 (401-475)||(3152238-3152312)
chr3 (361-475)||(51684620-51684734)
chr3 (359-424)||(18428757-18428822)
chr3 (364-441)||(31885531-31885608)
chr3 (391-442)||(37865424-37865475)
chr3 (361-440)||(38193510-38193589)
chr3 (359-442)||(40508501-40508584)
chr3 (361-440)||(41979352-41979431)
chr3 (407-486)||(42279563-42279642)
chr3 (361-440)||(46308817-46308896)
chr3 (361-440)||(46310436-46310515)
chr3 (361-440)||(53094273-53094352)
chr3 (361-440)||(53187752-53187831)
chr3 (361-467)||(17515320-17515426)
chr3 (400-486)||(19987603-19987689)
chr3 (401-475)||(44794257-44794331)
chr3 (361-475)||(46112497-46112611)
chr3 (429-486)||(7884882-7884939)
chr3 (361-440)||(2661908-2661987)
chr3 (361-420)||(30598347-30598406)
chr3 (359-442)||(33850990-33851073)
chr3 (351-442)||(40998515-40998606)
chr3 (357-440)||(41944582-41944665)
chr3 (359-442)||(45255491-45255574)
chr3 (361-440)||(46611303-46611382)
chr3 (361-440)||(54900074-54900153)
chr3 (392-486)||(46197761-46197855)
chr3 (363-440)||(23291582-23291659)
chr3 (407-475)||(23293190-23293258)
chr3 (400-440)||(38191944-38191984)
chr3 (386-442)||(41946099-41946155)
chr3 (426-486)||(44276205-44276265)
chr3 (414-486)||(48830815-48830887)
[»] chr8 (60 HSPs)
chr8 (348-488)||(42897761-42897901)
chr8 (350-487)||(32822360-32822497)
chr8 (351-488)||(462357-462494)
chr8 (350-470)||(37526028-37526148)
chr8 (350-488)||(31821417-31821555)
chr8 (350-488)||(38882784-38882922)
chr8 (357-468)||(33160155-33160266)
chr8 (400-487)||(33750372-33750459)
chr8 (346-470)||(31201148-31201272)
chr8 (351-480)||(1320617-1320746)
chr8 (350-477)||(9184382-9184509)
chr8 (361-475)||(8609807-8609921)
chr8 (361-475)||(13108356-13108470)
chr8 (361-475)||(13282488-13282602)
chr8 (359-456)||(25707287-25707384)
chr8 (361-475)||(27691164-27691278)
chr8 (351-488)||(8654500-8654636)
chr8 (359-456)||(25373608-25373705)
chr8 (361-486)||(41825653-41825778)
chr8 (346-442)||(31823476-31823572)
chr8 (350-442)||(40019155-40019247)
chr8 (361-468)||(38547238-38547345)
chr8 (393-475)||(26242334-26242416)
chr8 (393-475)||(41042604-41042686)
chr8 (357-454)||(28433737-28433834)
chr8 (392-475)||(15305838-15305921)
chr8 (392-475)||(15486207-15486290)
chr8 (359-442)||(33368767-33368850)
chr8 (359-442)||(42894784-42894867)
chr8 (361-467)||(13486127-13486233)
chr8 (394-470)||(9673190-9673266)
chr8 (359-442)||(461184-461267)
chr8 (361-476)||(5036455-5036570)
chr8 (361-440)||(29237161-29237240)
chr8 (361-440)||(33707216-33707295)
chr8 (361-440)||(35509224-35509303)
chr8 (361-440)||(42943426-42943505)
chr8 (362-440)||(13283995-13284073)
chr8 (361-475)||(42941784-42941898)
chr8 (393-442)||(32824271-32824320)
chr8 (392-468)||(22272377-22272453)
chr8 (366-442)||(37524873-37524949)
chr8 (361-440)||(601704-601783)
chr8 (391-442)||(1322314-1322365)
chr8 (361-440)||(27692837-27692916)
chr8 (361-440)||(29239187-29239266)
chr8 (400-475)||(33708824-33708899)
chr8 (359-442)||(33748340-33748423)
chr8 (361-440)||(33762713-33762792)
chr8 (361-440)||(35510819-35510898)
chr8 (361-440)||(38548831-38548910)
chr8 (363-440)||(8608249-8608327)
chr8 (400-442)||(24526945-24526987)
chr8 (363-440)||(9671989-9672066)
chr8 (393-442)||(31199527-31199576)
chr8 (359-424)||(38881436-38881501)
chr8 (351-456)||(40020654-40020759)
chr8 (400-440)||(15308261-15308301)
chr8 (400-440)||(15488630-15488670)
chr8 (400-440)||(33761118-33761158)
[»] chr1 (52 HSPs)
chr1 (346-488)||(42134477-42134619)
chr1 (351-466)||(18183952-18184067)
chr1 (350-488)||(36895497-36895635)
chr1 (351-487)||(35479963-35480099)
chr1 (349-488)||(46638794-46638933)
chr1 (346-470)||(47269461-47269585)
chr1 (367-488)||(45380971-45381092)
chr1 (400-488)||(31801682-31801770)
chr1 (351-470)||(27940608-27940727)
chr1 (351-470)||(44157433-44157552)
chr1 (361-475)||(4855966-4856080)
chr1 (361-475)||(46583556-46583670)
chr1 (361-486)||(2869589-2869714)
chr1 (351-458)||(33685265-33685372)
chr1 (361-475)||(34778138-34778252)
chr1 (361-464)||(31238506-31238609)
chr1 (361-475)||(25278368-25278482)
chr1 (361-475)||(27087293-27087407)
chr1 (392-486)||(51896141-51896235)
chr1 (359-442)||(5784867-5784950)
chr1 (361-475)||(33602644-33602758)
chr1 (361-475)||(37344352-37344466)
chr1 (361-440)||(26223597-26223676)
chr1 (361-440)||(31236829-31236908)
chr1 (359-442)||(42136244-42136327)
chr1 (420-470)||(6575261-6575311)
chr1 (361-475)||(6818678-6818792)
chr1 (393-475)||(15104483-15104565)
chr1 (361-475)||(50556097-50556211)
chr1 (393-442)||(27952500-27952549)
chr1 (361-453)||(3013498-3013590)
chr1 (350-442)||(11152544-11152636)
chr1 (350-442)||(31803700-31803792)
chr1 (361-440)||(4854420-4854499)
chr1 (400-475)||(9121668-9121743)
chr1 (359-442)||(33679267-33679350)
chr1 (361-440)||(37345962-37346041)
chr1 (407-486)||(51121961-51122040)
chr1 (351-456)||(5783364-5783469)
chr1 (359-440)||(6577107-6577188)
chr1 (359-440)||(35478095-35478176)
chr1 (361-453)||(25278975-25279067)
chr1 (361-440)||(34776579-34776658)
chr1 (359-442)||(44159294-44159377)
chr1 (359-442)||(45379093-45379176)
chr1 (361-440)||(46582020-46582099)
chr1 (400-475)||(47013082-47013157)
chr1 (362-440)||(33599229-33599307)
chr1 (361-438)||(8167952-8168029)
chr1 (401-442)||(18180550-18180591)
chr1 (359-440)||(51894575-51894656)
chr1 (350-442)||(47264123-47264215)
[»] chr2 (47 HSPs)
chr2 (351-488)||(37417273-37417410)
chr2 (352-468)||(25619661-25619777)
chr2 (351-488)||(29909647-29909784)
chr2 (351-462)||(15432328-15432439)
chr2 (357-486)||(42879362-42879490)
chr2 (397-488)||(39384-39475)
chr2 (361-475)||(16763086-16763200)
chr2 (350-470)||(15372498-15372618)
chr2 (351-470)||(41706539-41706658)
chr2 (357-470)||(39562-39675)
chr2 (351-488)||(92334-92470)
chr2 (350-462)||(42001609-42001720)
chr2 (359-482)||(11315328-11315451)
chr2 (393-486)||(40560265-40560358)
chr2 (361-467)||(2766944-2767050)
chr2 (361-475)||(39664768-39664882)
chr2 (359-456)||(361453-361550)
chr2 (350-442)||(28248175-28248267)
chr2 (350-440)||(41144-41234)
chr2 (361-475)||(14389104-14389218)
chr2 (361-475)||(44709765-44709879)
chr2 (386-475)||(16377217-16377306)
chr2 (361-468)||(42519232-42519340)
chr2 (359-442)||(11021541-11021624)
chr2 (361-475)||(19908266-19908381)
chr2 (400-475)||(24208062-24208137)
chr2 (359-442)||(42880811-42880894)
chr2 (359-444)||(20941989-20942074)
chr2 (393-442)||(41708430-41708479)
chr2 (366-442)||(42003490-42003566)
chr2 (400-475)||(6786001-6786076)
chr2 (361-440)||(16764611-16764690)
chr2 (369-475)||(37020526-37020632)
chr2 (351-456)||(28246663-28246768)
chr2 (363-440)||(39663166-39663243)
chr2 (357-456)||(38148501-38148601)
chr2 (359-442)||(33201-33284)
chr2 (394-485)||(6797550-6797641)
chr2 (357-456)||(11023032-11023130)
chr2 (361-440)||(14387359-14387438)
chr2 (339-442)||(15373888-15373991)
chr2 (361-475)||(17696216-17696330)
chr2 (363-433)||(19906694-19906764)
chr2 (407-468)||(7744099-7744160)
chr2 (407-475)||(17946150-17946218)
chr2 (361-457)||(19581424-19581520)
chr2 (407-475)||(39455225-39455293)
[»] chr4 (51 HSPs)
chr4 (350-488)||(44558480-44558618)
chr4 (350-470)||(10372711-10372831)
chr4 (351-470)||(47941811-47941930)
chr4 (350-470)||(10762580-10762700)
chr4 (349-468)||(51041938-51042056)
chr4 (351-488)||(2350494-2350631)
chr4 (351-488)||(35996063-35996200)
chr4 (361-488)||(27624816-27624943)
chr4 (351-470)||(44794765-44794884)
chr4 (400-470)||(2827453-2827523)
chr4 (349-488)||(4519374-4519513)
chr4 (361-475)||(41761746-41761860)
chr4 (359-442)||(2828411-2828494)
chr4 (359-442)||(43778397-43778480)
chr4 (361-486)||(51011936-51012061)
chr4 (350-442)||(39085152-39085244)
chr4 (346-442)||(39923007-39923103)
chr4 (359-442)||(4520451-4520534)
chr4 (361-475)||(41781549-41781663)
chr4 (361-475)||(43519434-43519548)
chr4 (360-442)||(44556629-44556711)
chr4 (349-442)||(44992806-44992899)
chr4 (393-485)||(13450970-13451062)
chr4 (350-442)||(42879274-42879366)
chr4 (350-456)||(39083638-39083744)
chr4 (361-475)||(49523134-49523248)
chr4 (351-456)||(5484540-5484645)
chr4 (393-486)||(42980677-42980770)
chr4 (393-442)||(44792976-44793025)
chr4 (370-441)||(230455-230526)
chr4 (361-440)||(319283-319362)
chr4 (361-440)||(4169696-4169775)
chr4 (361-440)||(4173740-4173819)
chr4 (361-440)||(43507177-43507256)
chr4 (361-440)||(43508653-43508732)
chr4 (344-442)||(5486052-5486150)
chr4 (350-456)||(39921493-39921599)
chr4 (392-442)||(47942746-47942796)
chr4 (394-442)||(10371100-10371148)
chr4 (352-456)||(39189383-39189487)
chr4 (369-440)||(835042-835113)
chr4 (361-440)||(33264392-33264471)
chr4 (391-442)||(39190819-39190870)
chr4 (361-440)||(39345574-39345653)
chr4 (361-440)||(49524733-49524812)
chr4 (361-440)||(51013886-51013965)
chr4 (393-442)||(27626728-27626777)
chr4 (394-475)||(35404445-35404526)
chr4 (351-456)||(42880774-42880879)
chr4 (351-456)||(43779886-43779991)
chr4 (394-442)||(15450416-15450464)
[»] chr6 (30 HSPs)
chr6 (400-468)||(3018439-3018507)
chr6 (351-470)||(29077328-29077447)
chr6 (351-470)||(4641355-4641474)
chr6 (351-470)||(29112300-29112419)
chr6 (393-470)||(2968181-2968258)
chr6 (359-486)||(20523374-20523501)
chr6 (361-486)||(32439080-32439205)
chr6 (363-475)||(13613582-13613694)
chr6 (351-442)||(17950561-17950652)
chr6 (361-475)||(7372958-7373072)
chr6 (363-432)||(13610702-13610771)
chr6 (351-442)||(4646216-4646307)
chr6 (359-486)||(30891132-30891259)
chr6 (351-456)||(35175882-35175987)
chr6 (359-475)||(10568407-10568523)
chr6 (400-475)||(3456797-3456872)
chr6 (407-486)||(9398716-9398795)
chr6 (350-456)||(17952061-17952167)
chr6 (359-477)||(24662488-24662606)
chr6 (369-475)||(32455891-32455997)
chr6 (359-440)||(11357194-11357275)
chr6 (345-442)||(29114776-29114873)
chr6 (366-442)||(31210440-31210516)
chr6 (359-442)||(30639619-30639702)
chr6 (361-475)||(6899495-6899609)
chr6 (429-475)||(7049835-7049881)
chr6 (361-475)||(11355232-11355346)
chr6 (361-475)||(32516887-32517001)
chr6 (430-475)||(14338475-14338520)
chr6 (346-442)||(35174386-35174482)
[»] scaffold0477 (1 HSPs)
scaffold0477 (351-470)||(6639-6758)
[»] scaffold1041 (1 HSPs)
scaffold1041 (374-456)||(2121-2203)
[»] scaffold0058 (3 HSPs)
scaffold0058 (361-475)||(3304-3418)
scaffold0058 (361-475)||(4476-4590)
scaffold0058 (361-440)||(14343-14422)
[»] scaffold1454 (1 HSPs)
scaffold1454 (415-475)||(1327-1387)
[»] scaffold0345 (1 HSPs)
scaffold0345 (359-440)||(1555-1636)


Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 490
Target Start/End: Original strand, 38596517 - 38597007
Alignment:
Q  1 ataaatgtcccacatagaccagaacagaaaatatatgagcctttataaagttagattaagcatgaataaacgccgagctattaacgccagcttcttactc 100  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  38596517 ataaatgtcccacatagaccagaacataaaatatatgggtctttataaagttagattaagcatgaatcaatgccgagctattaacgccagcttgttactc 38596616  T
Q  101 aagtgagggcataaaattgttggaacacggcttaaggtaaggtaagctgctatgggttatgtctatcgcatctgcaatagggtgggttaagactcttatg 200  Q
    |||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||    
T  38596617 aagtgagggcataaaattgttggaacacggcttaaggta----aagctgctatgggttatgtctattgcatctgcaatagggt-ggtttagactcttatg 38596711  T
Q  201 acgcctttaatctaagagagcttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaannnnnnnaggagcaacaggtttgtca 300  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||    
T  38596712 acgtctttaatctaagagagcttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaatttttttaggagcaaaaggtttgtca 38596811  T
Q  301 ataaattattttcttaca-------aannnnnnnngggattaccaatatatatttttgagtggaccatcaaattcgtccttgaatttttatggatcgatc 393  Q
    ||||||| ||||||||||       ||         |||||||||||||||| || |||||| |||||||||||||||||||||||||||||| |||  |    
T  38596812 ataaatttttttcttacaaatttttaaatttttttaggattaccaatatata-ttctgagtgaaccatcaaattcgtccttgaatttttatgggtcggcc 38596910  T
Q  394 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagccgt 490  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  || || ||| ||||| |||||||||    
T  38596911 aaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaaaaggtctttctgtccaagtgttccgttagccgt 38597007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 38552296 - 38552029
Alignment:
Q  1 ataaatgtcccacatagaccagaacagaaaatatatgagcctttataaagttagattaagcatgaataaacgccgagctattaacgccagcttcttactc 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | ||||    
T  38552296 ataaatgtcccacatagaccagaacataaaatatatgggcctttataaagttagattaagcataaatcaacgccgagctattaacgccagcttgtcactc 38552197  T
Q  101 aagtgagggcataaaattgttggaacacggcttaaggtaaggtaagctgctatgggttatgtctatcgcatctgcaatagggtgggttaagactcttatg 200  Q
    |||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  38552196 aagtgagggcataaaattgttggaacacggcttaagg-----taagctgctatgggttatgtctatcacatctgcaatagggt-ggttaagactcttatg 38552103  T
Q  201 acgcctttaatctaagagagcttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaa 274  Q
    |||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  38552102 acgcctataatctaagagagctttggcacttgtaagtggataataaggatagaaaactacccttgaaccatcaa 38552029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 38061067 - 38061390
Alignment:
Q  1 ataaatgtcccacatagaccagaacagaaaatatatgagcctttataaagttagattaagcatgaataaacgccgagctattaacgccagcttcttactc 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||| |||||| ||||||    
T  38061067 ataaatgtcccacatagaccagaacataaaatatatgggcctttataaagtaagattaagcatgaatcgacgccgagctattaacgacagcttgttactc 38061166  T
Q  101 aagtgagggcataaaattgttggaacacggcttaaggtaaggtaagctgctatgggttatgtctatcgcatctgcaatagggtgggttaagactcttatg 200  Q
    |||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  38061167 aagtgagggcataaaattgttggaacacggcttaaggtaag-----ctgctatgggttatgtctatcacatctgcaatagggtgg-ttaagactcttatg 38061260  T
Q  201 acgcctttaatctaag--agagcttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaannnnnnn--------aggagcaac 290  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||     
T  38061261 acgcctttaatctaagccagagtttcggcactcgtacgtggataataaggatagaaaactacccttgaaccatcaattttttattttttttaggagcaaa 38061360  T
Q  291 aggtttgtcaataaattattttcttacaaa 320  Q
    ||||||||||||||||||||||||||||||    
T  38061361 aggtttgtcaataaattattttcttacaaa 38061390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 43318184 - 43318047
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||||||||||||||||| |||  |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 43318085  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||| |||||||||||||||| ||| || ||||||||||    
T  43318084 cataaaaaaggtccctccgtccaagtgctctgttagcc 43318047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 349 - 488
Target Start/End: Original strand, 32087512 - 32087651
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| |||||||||||||||| |||||||| | |  |||||||| || |||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  32087512 ttgagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacg 32087611  T
Q  449 tccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||||||||||||||| ||| || ||||||||||    
T  32087612 tccatcaaaaaggtccctccgtccaagtgctctgttagcc 32087651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 18728726 - 18728589
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||| |||||||| |    |||  ||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18728627  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||||||||||||| ||| || ||||||||||    
T  18728626 catcaaaaaggtccctccgtccaagtgctctgttagcc 18728589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 487
Target Start/End: Complemental strand, 35292505 - 35292370
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||||||||||||||||| | |  |||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35292505 gagtgaaccatcaaattcgtccttgaatttttatgggtggc-caaaatcatccttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 35292407  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagc 487  Q
    ||| |||||||| ||||||| |||||| || ||||||    
T  35292406 cataaaaaaggttcctccgtccaaatgctccgttagc 35292370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 350 - 466
Target Start/End: Complemental strand, 38178218 - 38178102
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| || ||||||||||||||| |||||| | || ||| |||||||  |||||||||||||||||||||||| |||||  |||||||||||||||||    
T  38178218 tgagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgt 38178119  T
Q  450 ccatcaaaaaggtccct 466  Q
    |||||||||||||||||    
T  38178118 ccatcaaaaaggtccct 38178102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 350 - 466
Target Start/End: Complemental strand, 38205442 - 38205326
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| || ||||||||||||||| |||||| | || ||| |||||||  |||||||||||||||||||||||| |||||  |||||||||||||||||    
T  38205442 tgagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgt 38205343  T
Q  450 ccatcaaaaaggtccct 466  Q
    |||||||||||||||||    
T  38205342 ccatcaaaaaggtccct 38205326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 35395333 - 35395470
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||| ||| |||||||| |    |||  ||| || ||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtc 35395432  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||||||||||||| ||| || ||||||||||    
T  35395433 catcaaaaaggtccctccgtccaagtgctctgttagcc 35395470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 369 - 485
Target Start/End: Original strand, 24496761 - 24496877
Alignment:
Q  369 gtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 468  Q
    |||||| ||||| || | |||| |||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||| |||||||| ||||| |||    
T  24496761 gtccttaaatttgtacgaatcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatcc 24496860  T
Q  469 gtacaaatgttctgtta 485  Q
    || ||||||||||||||    
T  24496861 gtccaaatgttctgtta 24496877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 33256400 - 33256519
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||| ||||||||||    |||  ||| ||  ||| |||||||||||||||||||||||| ||  |||||||||||||||||    
T  33256400 gagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtc 33256499  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||| ||||||||||    
T  33256500 catcaaaaaagtccctccgt 33256519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 17574328 - 17574442
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 17574427  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  17574428 gtccctccgtccaaa 17574442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 38597012 - 38597084
Alignment:
Q  418 atatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagccgt 490  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| ||||| |||||||||    
T  38597012 atatcaacttagtcccttaatttgtcagacgtccatcaaaaaggtccctctgtccaagtgttccgttagccgt 38597084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 36057727 - 36057613
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||| ||||||||||  |||||||||||||||| |    
T  36057727 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtccatcaaaatg 36057628  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  36057627 gtccctccgtccaaa 36057613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 7267853 - 7267967
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| ||| || |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  7267853 tcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 7267952  T
Q  461 gtccctccgtacaaa 475  Q
     ||||||||| ||||    
T  7267953 atccctccgtccaaa 7267967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 30468394 - 30468280
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||| |||||||||||||||| |   || | ||||||| ||| ||||||| ||||||||||| | ||||||| |||||||  |||||||||||||||| |    
T  30468394 tcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatg 30468295  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  30468294 gtccctccgtccaaa 30468280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 442
Target Start/End: Complemental strand, 32090018 - 32089925
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||| | |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  32090018 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 32089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 33257851 - 33257760
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||| |||||| ||||||| |||||||||| || |||  ||| || |||||| |||||||||||||||||| ||| |||||||||||||    
T  33257851 gagtggatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 33257760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 40330610 - 40330515
Alignment:
Q  347 ttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||||| | |||||| ||||||| |||||||| | || |||  |||| | ||||||||||||||||||||||||| ||| |||||||||||||    
T  40330610 ttttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 40330515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 2179797 - 2179911
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||| ||||||||||||| |   |||| ||||||| |||||| |||| || |||||||| | ||| |||||||||||  ||||| |||||||||| |    
T  2179797 tcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccatcaaaatg 2179896  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  2179897 gtccctccgtccaaa 2179911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 440
Target Start/End: Original strand, 32835884 - 32835965
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| ||||||| |||||||| | || ||| ||||||| |||||| |||||||||||||||||| ||| |||||||||||    
T  32835884 catcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 34327677 - 34327770
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||||| ||| || |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |||| |||||| |||| | ||||||||    
T  34327677 caaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtctctccgtccaaaagctctgttag 34327770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 457
Target Start/End: Complemental strand, 24541326 - 24541230
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 457  Q
    ||||||||||| ||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||    
T  24541326 tcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 24541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 21843071 - 21842992
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| ||||||| | |||| ||||||||||||| |||||||||||||||    
T  21843071 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 30463910 - 30463989
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||    
T  30463910 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 42619297 - 42619380
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | || ||| |||| || ||||||||||||||||||||||||| ||| |||| ||||||||    
T  42619297 catcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgt 42619380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 458
Target Start/End: Original strand, 8539685 - 8539782
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 458  Q
    ||||||||||||||||||||| |   ||| |||||||| || | | |||| ||||||||||| | |||||||||||||||  || |||||||||||||    
T  8539685 tcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaa 8539782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 18726563 - 18726656
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||| | |||||| ||||||| |||||||||| || |    ||| || ||||||||||||||||||||||||| ||||||||| |||||||    
T  18726563 ttgagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgt 18726656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 38176647 - 38176723
Alignment:
Q  366 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||| |||||||| |||| | |  |||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 38176723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 38203871 - 38203947
Alignment:
Q  366 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||| |||||||| |||| | |  |||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 38203947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 1344897 - 1344814
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||| ||||| | |||||||||||  |||||| |||||||||    
T  1344897 catcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgt 1344814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 2852896 - 2852975
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| ||||| |||||||||    
T  2852896 tcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 29621856 - 29621781
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  29621856 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 29621781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 2854440 - 2854327
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| | ||||| ||||| |||||||||||||||  |||||||||| ||||       
T  2854440 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtccaacaaattc 2854342  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  2854341 gtccctccgtccaaa 2854327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 18625122 - 18625008
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |  ||||    ||||| |||||| |||| || |||||||| | |||||||||||||||  ||  |||||||||||| |    
T  18625122 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 18625023  T
Q  461 gtccctccgtacaaa 475  Q
    |||| ||||| ||||    
T  18625022 gtccttccgtccaaa 18625008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 24498143 - 24498065
Alignment:
Q  366 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtca 444  Q
    ||||||| |||||||  | |||||| ||||| |  |||||||||||||||| | ||||| |||||||||||||||||||    
T  24498143 ttcgtccgtgaatttgcaaggatcggtcaaaatcatccctcaattatgcgataaatcaaattagtccctgaatttgtca 24498065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 42473682 - 42473625
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 457  Q
    |||||| |||||| |||||||||||  ||||||||||||||  |||||||||||||||    
T  42473682 gtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtccatcaaa 42473625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 12738815 - 12738736
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  |||||| || ||| |||| ||||||||||| | |||||||||||||||    
T  12738815 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 12801638 - 12801559
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  |||||| || ||| |||| ||||||||||| | |||||||||||||||    
T  12801638 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 457
Target Start/End: Original strand, 27075831 - 27075926
Alignment:
Q  362 caaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 457  Q
    ||||||| |||||||||||  | ||| ||  ||||||||| || ||||| | | ||||||||| ||||| |||||||||  |||||||||||||||    
T  27075831 caaattcatccttgaatttgcaaggaccggccaaatttgtaccacaatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaa 27075926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 40780599 - 40780674
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||| | ||||||||||| |||||||||||||||  || ||||||||||||   |||||||||| ||||    
T  40780599 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgtccaaa 40780674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 442
Target Start/End: Original strand, 35291045 - 35291139
Alignment:
Q  348 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||| | ||||||  |||||| |||||||| | || |||  ||||||  |||||||| |||| |||||||||| ||| |||||||||||||    
T  35291045 tttgagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaatttgt 35291139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 38552013 - 38551975
Alignment:
Q  282 aggagcaacaggtttgtcaataaattattttcttacaaa 320  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  38552013 aggagcaaaaggtttgtcaataagttattttcttacaaa 38551975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 7269486 - 7269446
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  7269486 gtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 2e-47; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 350 - 486
Target Start/End: Complemental strand, 33038922 - 33038786
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| | |||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33038922 tgagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgt 33038823  T
Q  450 ccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    ||||||||||||||||||||| ||| || ||||||||    
T  33038822 ccatcaaaaaggtccctccgtccaagtgctctgttag 33038786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 23953805 - 23953942
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||||| |||||||| || ||| | ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  23953805 gagtgaaccatcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtc 23953904  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
     ||||||||||||||||||| ||| || || |||||||    
T  23953905 aatcaaaaaggtccctccgtccaagtgctccgttagcc 23953942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 487
Target Start/End: Complemental strand, 46996827 - 46996690
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||||||||||| |||||||| | |  |||  ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46996827 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgt 46996728  T
Q  450 ccatcaaaaaggtccctccgtacaaatgttctgttagc 487  Q
    ||||||||||||||||||||| ||| || || ||||||    
T  46996727 ccatcaaaaaggtccctccgtccaagtgctccgttagc 46996690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 348 - 488
Target Start/End: Complemental strand, 47341813 - 47341673
Alignment:
Q  348 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 447  Q
    |||||||| ||||||||||||||||||||||||| | || |||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  47341813 tttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 47341714  T
Q  448 gtccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||  |||||||||||  |||||| ||| || || |||||||    
T  47341713 gttaatcaaaaaggtatctccgtccaagtgctccgttagcc 47341673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 2167479 - 2167598
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||||  |||||||||||  || || ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2167479 gagtgaaccatcaaatatgtccttgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcc 2167578  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  2167579 catcaaaaaggtccctccgt 2167598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 488
Target Start/End: Complemental strand, 38615027 - 38614899
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 458  Q
    |||||||||||||||| |||||| | || |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  38615027 catcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgtcagacgtccat-aaaa 38614929  T
Q  459 aggtccctccgtacaaatgttctgttagcc 488  Q
    | ||||||||||  || || ||||||||||    
T  38614928 atgtccctccgtctaagtgctctgttagcc 38614899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 38613605 - 38613492
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||||| |||||| | || |||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 38613506  T
Q  451 catcaaaaaggtcc 464  Q
    ||| ||||| ||||    
T  38613505 cataaaaaatgtcc 38613492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 46812706 - 46812569
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| |||||||||||||||||| |  |||  ||||||  ||||||||||| | |||||||||| ||||||||| |||||||||||||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtc 46812607  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||||||  ||||| ||| || ||||||||||    
T  46812606 catcaaaaaggtcattccgtccaagtgctctgttagcc 46812569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 346 - 470
Target Start/End: Complemental strand, 8423410 - 8423286
Alignment:
Q  346 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 445  Q
    |||| ||||| |||||||| || |||| |||||||| | || ||   |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  8423410 ttttcgagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcag 8423311  T
Q  446 acgtccatcaaaaaggtccctccgt 470  Q
    ||||| |||||||||||||||||||    
T  8423310 acgtcaatcaaaaaggtccctccgt 8423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 351 - 477
Target Start/End: Original strand, 40784346 - 40784472
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||| |||||||||||| |  ||    |||||  ||| |||||||||||||||||||||||||||  |||||||||||||| ||    
T  40784346 gagtgaaccatcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagtctttgaatttgtcagacatc 40784445  T
Q  451 catcaaaaaggtccctccgtacaaatg 477  Q
    |||||||||||||||||||| ||||||    
T  40784446 catcaaaaaggtccctccgtccaaatg 40784472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 359 - 470
Target Start/End: Original strand, 27955378 - 27955489
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 458  Q
    ||||||||||||||||||||||||| |||||    |||||  |||||||||| | ||||||||||||||| |  |||||||||||||||||||||||||     
T  27955378 catcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaag 27955477  T
Q  459 aggtccctccgt 470  Q
    ||||||||||||    
T  27955478 aggtccctccgt 27955489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 35344372 - 35344295
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 470  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||    
T  35344372 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 2492333 - 2492436
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    ||||||||||||||||| ||||||||| || ||| ||||| || ||| |||||||||||||||||||||||| | | ||||||| ||| |||||||| ||    
T  2492333 accatcaaattcgtcctcgaatttttacgggtcggtcaaaattatccttcaattatgcgaaatatcaacttaatacttgaatttttcaaacgtccataaa 2492432  T
Q  457 aaag 460  Q
    ||||    
T  2492433 aaag 2492436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 45465267 - 45465184
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| |||||||||||||||||| || ||| |||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  45465267 catcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 45465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 361 - 457
Target Start/End: Complemental strand, 29996628 - 29996532
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 457  Q
    ||||||||||||||||||||| |   |||| |||| ||||||||| |||| ||||||||||||| ||| |||||||||||  |||||||||||||||    
T  29996628 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtccatcaaa 29996532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 38614875 - 38614792
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| | ||||||||||||||||||| ||| |||||||  |||||||||||||| ||||||||||||||||| ||| |||||    
T  38614875 catcaactacgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccttgagtttgt 38614792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 46810713 - 46810796
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | ||||||  |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  46810713 catcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgt 46810796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 39859343 - 39859229
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | ||||||| |||||||  ||||||||| |||||| |    
T  39859343 tcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatg 39859244  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  39859243 gtccctccgtccaaa 39859229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 30108573 - 30108656
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  30108573 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 30108656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 35342433 - 35342516
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| || |||| |||||| ||| || |||  |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  35342433 catcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 35342516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 36756966 - 36756883
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||| | |||||||| |||||||| ||||||| |||||||||||||| |||||||||| ||| || ||||||||||    
T  36756966 catcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgt 36756883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 36762763 - 36762680
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||||| ||||||  |||||| |||||||||||||| |||||||||| |||  ||||||||||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgt 36762680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 36766490 - 36766407
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||| | |||||||| |||||||| ||||||| |||||||||||||| |||||||||| ||| || ||||||||||    
T  36766490 catcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgt 36766407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 6602385 - 6602459
Alignment:
Q  401 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    ||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  6602385 tccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 6602459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 27666179 - 27666065
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||  || ||||||||||||       
T  27666179 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatcc 27666080  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  27666079 gtccctccgtccaaa 27666065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 456
Target Start/End: Original strand, 56340 - 56435
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaattt-gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    ||||||||||||||||||||| |   ||||  ||||||| |||||| |||| ||||||||||||| |||||||||||||||  ||||||||||||||    
T  56340 tcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 4321033 - 4321129
Alignment:
Q  346 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||||| | |||||| ||||||| |||||||| | || |||  ||| || |||||| |||||||||||||||||| ||| |||||||||||||    
T  4321033 tttttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 4321129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 475
Target Start/End: Complemental strand, 34776983 - 34776915
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||| ||||||||||| | |||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  34776983 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 34776915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 13169762 - 13169683
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||||||||||||| |||| ||||||||||| | |||||||||||||||    
T  13169762 tcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 33775418 - 33775497
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||| ||||||| |||||||||| || ||| |||| || |||| |||||||||||||||||||| ||| |||||||||||    
T  33775418 tcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaattt 33775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 456
Target Start/End: Original strand, 45463668 - 45463775
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| |||||||| ||||||| |||||||| | || |||  |||||| |||||| ||||   |||||||||||  ||||||||||||||||  ||||    
T  45463668 ttgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacg 45463767  T
Q  449 tccatcaa 456  Q
    ||||||||    
T  45463768 tccatcaa 45463775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 442
Target Start/End: Complemental strand, 23955379 - 23955285
Alignment:
Q  348 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||| | |||||| ||||||  ||||||||||||||| |  |||||| |||||| ||||||| |||||||||| ||| || ||||||||||    
T  23955379 tttgagtgaatcatcaacttcgtctctgaatttttatggattggccaaattcgtcccttaattatgtgaaatatcaatttaatctctgaatttgt 23955285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 24228491 - 24228409
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||||| |||| ||||||||||| | |||||| ||||||||  |||||||||||||||| ||||||| ||| ||||    
T  24228491 caaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtcccttcgtccaaa 24228409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 38474257 - 38474143
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||| ||||| |||||||||   |||| ||||||| |||||| |||| ||||||||||| | ||||||| |||||||  |||||| | ||||||| |    
T  38474257 tcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcctatcaaaatg 38474158  T
Q  461 gtccctccgtacaaa 475  Q
    |||| ||||| ||||    
T  38474157 gtccatccgtccaaa 38474143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 8421458 - 8421507
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  8421458 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 8421507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 11682830 - 11682886
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    ||||||||||||||| ||||||||| ||||||| |||||| || |||||||||||||    
T  11682830 gtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaa 11682886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 33037701 - 33037785
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaa-cttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||||  |||  ||||||  ||||||||||||| ||||||||||  ||| |||||||||||||    
T  33037701 catcaagttcgtccttgaatttttatgtgtcggccaaattcatccctcaattatgtgaaatatcaattttaatccctgaatttgt 33037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 486
Target Start/End: Complemental strand, 35693419 - 35693359
Alignment:
Q  426 ttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||||||||||||||  |||||||||||||||| ||||||||| | |||| ||||||||||    
T  35693419 ttagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttag 35693359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 46994659 - 46994751
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| | |||||| ||||||| |||||||| | || |||  ||| || |||| |||||||||||||||||||| ||| |||||||||||||    
T  46994659 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 46994751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 3690158 - 3690241
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||  | |||  ||| || || |||||||||||||||||||||| ||| ||| |||||||||    
T  3690158 catcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaatttaatccttgaatttgt 3690241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 35403698 - 35403619
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  35403698 tcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 39857655 - 39857734
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||| ||||||    
T  39857655 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 37115640 - 37115526
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||| ||||||||| |   |||  ||||||| || ||| |||| ||| ||||||| | ||||| |||||||||  ||||||||||||||||      
T  37115640 tcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtccatcaaaata 37115541  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  37115540 gtccctccgtccaaa 37115526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 366739 - 366804
Alignment:
Q  392 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 457  Q
    |||||||||||||||| || |  |||||||||| |||||||||||||||  |||||||| ||||||    
T  366739 tcaaatttgtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaa 366804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 475
Target Start/End: Original strand, 20478105 - 20478166
Alignment:
Q  414 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  20478105 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 20478166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 45359392 - 45359453
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 468  Q
    |||| ||||||||||| | ||||||| |||||||  |||||||||||||||| |||||||||    
T  45359392 aattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctcc 45359453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 6605476 - 6605397
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||| ||||||||||||| |   |||| |||||||||| ||| |||| ||||||||| | | |||||||||||||||    
T  6605476 tcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 13039721 - 13039642
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||| |||||||||||||||| |   ||| |||||||| |||||| |||| ||||||||| | | |||||||||||||||    
T  13039721 tcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattt 13039642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 19712331 - 19712268
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 470  Q
    ||||||| |||||||||  |||||| |||||||| | ||||||||||||||| |||||| ||||    
T  19712331 aattatgtgaaatatcacattagtctctgaatttattagacgtccatcaaaatggtcccaccgt 19712268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 27664440 - 27664519
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||| ||||||||||||| |   ||||  ||| ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  27664440 tcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 456
Target Start/End: Original strand, 34691001 - 34691100
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    |||||||| ||| ||| |||||||||| ||||||  |||||| |||||  ||||   | |||||||||  ||||| ||||||||||| ||||||||||||    
T  34691001 accatcaatttcatccctgaatttttagggatcggccaaattcgtccccaaatttaacaaaatatcaaaatagtctctgaatttgtctgacgtccatcaa 34691100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 35401979 - 35402058
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||   || || |||||| |||| ||||||||||||| |||||||||||||||    
T  35401979 tcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 37796249 - 37796186
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 470  Q
    |||| ||||||||||| | |||||||||||||||  | ||||||||||||||  ||||||||||    
T  37796249 aattttgcgaaatatctatttagtccctgaattttacggacgtccatcaaaatagtccctccgt 37796186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 40785631 - 40785548
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| |||||||||||||||| | || |||  ||||||  || |||||||||| ||||||||||  || |||||||||||||    
T  40785631 catcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaatttgt 40785548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 2168931 - 2168834
Alignment:
Q  345 atttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| ||||| | |||||| ||||||||||||||||||  | |||  ||||||  ||||| ||||| |  ||||||||| ||||||| |||||||||    
T  2168931 attttggagtgaatcatcaacttcgtccttgaatttttactggtcgtccaaattcatcccttaattaagaaaaatatcaatttagtccttgaatttgt 2168834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 46439612 - 46439539
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccct 434  Q
    ||||||||||| |||||||||||   |||||||||| |||||  | |||| ||||||||||| | |||||||||    
T  46439612 tcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 1546343 - 1546411
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| ||||||||||| ||||    
T  1546343 aattttgcgaaatatcaattgcgtccttgaatttctctcacgtccatcaaaatggtccctccgtccaaa 1546411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 7e-47; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 349 - 488
Target Start/End: Original strand, 48633875 - 48634014
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| ||||||||||||||||||||||||| | || ||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48633875 ttgagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 48633974  T
Q  449 tccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||||||||||||||| ||| || || |||||||    
T  48633975 tccatcaaaaaggtccctccgtccaagtgctccgttagcc 48634014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 348 - 486
Target Start/End: Complemental strand, 40509038 - 40508900
Alignment:
Q  348 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 447  Q
    |||||||| ||||||||||||||||||||||||| | || |||  |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  40509038 tttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagac 40508939  T
Q  448 gtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||||||||||| |||||||||| ||| ||||| |||||    
T  40508938 gtccatcaaaaatgtccctccgtccaagtgttccgttag 40508900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 31887576 - 31887439
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||||||||||||||||||| | |||||| |||||||   || |||||||||||||||||||||||||||||||||||||||||| |||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtc 31887477  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
     ||||||||||||||||||| ||| || || |||||||    
T  31887476 tatcaaaaaggtccctccgtccaagtgctccgttagcc 31887439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 33113306 - 33113185
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| ||||||||||| ||||||||||||||| || |||  |||| |  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  33113306 ttgagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacg 33113207  T
Q  449 tccatcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||||    
T  33113206 tccatcaaaaaggtccctccgt 33113185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 349 - 467
Target Start/End: Original strand, 23774150 - 23774268
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| ||||||||||||||||||||||||| | |  |||  |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23774150 ttgagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacg 23774249  T
Q  449 tccatcaaaaaggtccctc 467  Q
    ||||||||||| |||||||    
T  23774250 tccatcaaaaaagtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 345 - 488
Target Start/End: Complemental strand, 18430401 - 18430258
Alignment:
Q  345 atttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtca 444  Q
    ||||| ||||| ||||||||||||||||||||||||| | || ||   ||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  18430401 attttggagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtca 18430302  T
Q  445 gacgtccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||  |||||||||||||||| ||| || || |||||||    
T  18430301 gacgtccaataaaaaggtccctccgtccaagtgctccgttagcc 18430258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 45898474 - 45898353
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| |||||||||||||||| |||||||| |    |||| ||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  45898474 ttgagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacg 45898375  T
Q  449 tccatcaaaaaggtccctccgt 470  Q
    || |||||||||||||||||||    
T  45898374 tctatcaaaaaggtccctccgt 45898353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 24383018 - 24382898
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| ||||||||||| ||||||||||||||| || |||  ||||||  ||| ||||||||| |||||||||||||||||| || |||||||||||||    
T  24383018 tgagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgtcagacgt 24382919  T
Q  450 ccatcaaaaaggtccctccgt 470  Q
    |||||||||||||||||||||    
T  24382918 ccatcaaaaaggtccctccgt 24382898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 351 - 476
Target Start/End: Complemental strand, 23888896 - 23888771
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||| |||||||| |    |||  ||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtc 23888797  T
Q  451 catcaaaaaggtccctccgtacaaat 476  Q
    |||||||||||||||||||| |||||    
T  23888796 catcaaaaaggtccctccgtccaaat 23888771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 351 - 470
Target Start/End: Complemental strand, 41021127 - 41021008
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||| |||||||| | |  |||  |||||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  41021127 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 41021028  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  41021027 catcaaaaaggtccctccgt 41021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 469
Target Start/End: Complemental strand, 2977456 - 2977335
Alignment:
Q  348 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 447  Q
    |||||||| | ||||||||||||||||||||||||| | ||||  ||||||  ||||| |||||||||||||||||| | ||||||| ||||||||| ||    
T  2977456 tttgagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatac 2977357  T
Q  448 gtccatcaaaaaggtccctccg 469  Q
    ||||||||||||||||| ||||    
T  2977356 gtccatcaaaaaggtccatccg 2977335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 351 - 470
Target Start/End: Complemental strand, 45257344 - 45257225
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||| |||||||||| | || |||  ||||||  |||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  45257344 gagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtc 45257245  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||| ||||| ||||||||||    
T  45257244 cataaaaaatgtccctccgt 45257225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 33852782 - 33852657
Alignment:
Q  363 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggt 462  Q
    ||||| ||||||||||||||| || | | |||||||| |||||||||||||||||||||||| ||| |  |||||||| |||||||||||||||||||||    
T  33852782 aaatttgtccttgaatttttacgggttggtcaaatttatccctcaattatgcgaaatatcaatttaatttctgaatttatcagacgtccatcaaaaaggt 33852683  T
Q  463 ccctccgtacaaatgttctgttagcc 488  Q
    ||||| || ||| || || |||||||    
T  33852682 ccctctgtccaagtgctccgttagcc 33852657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 470
Target Start/End: Complemental strand, 39641969 - 39641844
Alignment:
Q  345 atttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtca 444  Q
    ||||||||||| ||||||||||| ||||||||||||||| || |||  ||||||  || ||||||||| | || |||||||||||||| | |||||||||    
T  39641969 atttttgagtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattcatctctcaattattcaaagtatcaacttagtccttaaatttgtca 39641870  T
Q  445 gacgtccatcaaaaaggtccctccgt 470  Q
    ||||| ||| ||||||||||||||||    
T  39641869 gacgttcataaaaaaggtccctccgt 39641844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 51454374 - 51454237
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||||||||||||||||||| | ||||||  ||||||  | |||||||||||||||||||||| ||||||  ||||||||||| || ||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgtcaaacatc 51454275  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||| ||||| ||||||| || ||| || || |||||||    
T  51454274 cataaaaaatgtccctctgtccaagtgatccgttagcc 51454237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 53190893 - 53190779
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 53190794  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  53190793 gtccctccgtccaaa 53190779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 361 - 486
Target Start/End: Complemental strand, 30600052 - 30599927
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||||||||||||| ||||||||   ||||  ||||||||||||| |||| ||||||||||| | |||||||||||||||   ||||||| ||||||| |    
T  30600052 tcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcgatcaaaatg 30599953  T
Q  461 gtccctccgtacaaatgttctgttag 486  Q
    |||||||||| |||| | ||||||||    
T  30599952 gtccctccgtccaaaagctctgttag 30599927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 54898447 - 54898561
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||  ||||||| |||||||| |    
T  54898447 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 54898546  T
Q  461 gtccctccgtacaaa 475  Q
    ||| |||||| ||||    
T  54898547 gtctctccgtccaaa 54898561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 486
Target Start/End: Original strand, 21348733 - 21348858
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||| ||||||||||||| |   ||||  |||||| |||| | |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  21348733 tcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 21348832  T
Q  461 gtccctccgtacaaatgttctgttag 486  Q
    |||||||||| |||| | ||||||||    
T  21348833 gtccctccgtccaaaagctctgttag 21348858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 361 - 485
Target Start/End: Original strand, 2660222 - 2660346
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||| ||| || |||||| |||| ||||||||||||| ||||||| |||||||  |||||||||||||||       
T  2660222 tcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattc 2660321  T
Q  461 gtccctccgtacaaatgttctgtta 485  Q
    |||||||||| |||| | |||||||    
T  2660322 gtccctccgtccaaaaggtctgtta 2660346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 23887206 - 23887289
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||||| |||   || || ||||||||||||||||||||||||| ||| |||||||||||||    
T  23887206 catcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 23887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 475
Target Start/End: Complemental strand, 35905843 - 35905732
Alignment:
Q  364 aattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtc 463  Q
    ||||| |||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||  ||||||| |||||||| ||||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  464 cctccgtacaaa 475  Q
    ||||||| ||||    
T  35905743 cctccgtccaaa 35905732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 45897058 - 45897141
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| |||||||||||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  45897058 catcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 45897141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 48635456 - 48635373
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | |||||| ||||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  48635456 catcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 48635373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 2226286 - 2226172
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  ||||||| |||||||| |    
T  2226286 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 2226187  T
Q  461 gtccctccgtacaaa 475  Q
     ||||||||| ||||    
T  2226186 ttccctccgtccaaa 2226172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 27899215 - 27899101
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||| | |||| ||||||||||| | |||||||||||||||  ||||||||||| |||| |    
T  27899215 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccataaaaatg 27899116  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  27899115 gtccctccgtccaaa 27899101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 442
Target Start/End: Original strand, 33111838 - 33111932
Alignment:
Q  348 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||| | |||||| ||||||| |||||||| | || ||| |||||||  |||||||||||||||||||||||| ||| |||||||||||||    
T  33111838 tttgagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgt 33111932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 41977760 - 41977874
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||  |||||| ||||  |||||||||||| |||||||||||||||  ||||||||| |||||| |    
T  41977760 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtccgtcaaaatg 41977859  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  41977860 gtccctccgtccaaa 41977874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 1845839 - 1845903
Alignment:
Q  406 caattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 470  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||    
T  1845839 caattatgcaaaatatcaacttagtctttgaatttgacagacgtccatcaaaaacgtccctccgt 1845903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 442
Target Start/End: Complemental strand, 1847738 - 1847645
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||| | ||||||||| ||||||||||||| | || |||  ||||||  |||||||||||||| ||||||||| ||| |||||||||||||    
T  1847738 ttgagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaatttgt 1847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 442
Target Start/End: Original strand, 2975471 - 2975551
Alignment:
Q  362 caaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||||||||||||||||| |||||    |||||  ||||||||| |||||||||||||| ||| |||||||||||||    
T  2975471 caaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaatttaatccctgaatttgt 2975551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 3150262 - 3150341
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  3150262 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 24381758 - 24381817
Alignment:
Q  365 attcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaa 424  Q
    ||||||||||||||||||| ||||||  ||||||  ||||||||||||||||||||||||    
T  24381758 attcgtccttgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaa 24381817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 468
Target Start/End: Original strand, 43765147 - 43765254
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| ||||||| || ||  |||| ||||||||||| | |||||  ||||||||  |||||||||||||||| |    
T  43765147 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtccatcaaaatg 43765246  T
Q  461 gtccctcc 468  Q
    ||||||||    
T  43765247 gtccctcc 43765254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 475
Target Start/End: Complemental strand, 3152312 - 3152238
Alignment:
Q  401 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    ||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  3152312 tccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaa 3152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 51684620 - 51684734
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||   ||||||  ||||| |||| ||| ||||||| | ||||||| |||||||  |||||||||||||||| |    
T  51684620 tcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtccatcaaaatg 51684719  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  51684720 gtccctccgtccaaa 51684734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 18428757 - 18428822
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaa 424  Q
    |||||| ||||||| |||||||||| || ||| |||| || |||||||||||||||||||||||||    
T  18428757 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 18428822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 441
Target Start/End: Original strand, 31885531 - 31885608
Alignment:
Q  364 aattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttg 441  Q
    |||||||||||| ||||||| || ||| |||||||  ||||| |||||||||||||||||| ||||| | ||||||||    
T  31885531 aattcgtccttggatttttacgggtcggtcaaattcatcccttaattatgcgaaatatcaatttagtacttgaatttg 31885608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 37865424 - 37865475
Alignment:
Q  391 atcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  37865424 atcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 37865475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 38193589 - 38193510
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  38193589 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 40508501 - 40508584
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | || |||  |||||| |||||| ||||||||||||| |||| ||| |||||||||||||    
T  40508501 catcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgt 40508584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 41979431 - 41979352
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  41979431 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 486
Target Start/End: Original strand, 42279563 - 42279642
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||| ||| ||||||| | |||||||||||||||  |||||||| ||||||| ||||||||||| |||| | ||||||||    
T  42279563 aattttgcaaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctccgtccaaaagctctgttag 42279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 46308817 - 46308896
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  46308817 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 46310515 - 46310436
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||| ||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  46310515 tcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 53094352 - 53094273
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  53094352 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 53187752 - 53187831
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||| ||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  53187752 tcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 467
Target Start/End: Original strand, 17515320 - 17515426
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||||||| ||||||||||||||   || |  ||||||  || || |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  17515320 tcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 17515419  T
Q  461 gtccctc 467  Q
    |||||||    
T  17515420 gtccctc 17515426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 486
Target Start/End: Complemental strand, 19987689 - 19987603
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||||| |||| ||||||||||||| ||||||||| |||||  || ||||||||||||   |||||||||| |||| | ||||||||    
T  19987689 gtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttag 19987603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 44794257 - 44794331
Alignment:
Q  401 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    ||||| |||| ||||||||||||| |||||||||||||||  |||| ||||||||||   |||||||||| ||||    
T  44794257 tccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtccaaa 44794331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 46112497 - 46112611
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| ||   | |||| ||| ||||||| | ||||||| |||||||  |||||||||||||||| |    
T  46112497 tcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtccatcaaaatg 46112596  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  46112597 gtccctccgttcaaa 46112611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 7884939 - 7884882
Alignment:
Q  429 gtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    ||||||||||||  |||||||||||||||| ||||||||||| |||| |||| |||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttag 7884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 2661987 - 2661908
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||| ||| || |||| | |||| ||||||||||||| ||||||| |||||||    
T  2661987 tcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 30598347 - 30598406
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaata 420  Q
    ||||||||||||||||||||| |   |||| |||||||||||||| |||| |||||||||    
T  30598347 tcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaata 30598406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 33850990 - 33851073
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||| | |||||||| | || ||| |||| || ||||||||||||| ||||||||||| ||| || ||||||||||    
T  33850990 catcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaatttaatctctgaatttgt 33851073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 40998515 - 40998606
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| |||||||| || |||| |||||||| | |  ||| ||||||| |||||||||||||||||||| |||  ||  |||||||||||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgt 40998606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 440
Target Start/End: Original strand, 41944582 - 41944665
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||||| ||||||| |||||||| | ||||||  |||||| ||||| |||||   |||||||||||  ||||||||||||||    
T  41944582 accatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaattt 41944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 45255491 - 45255574
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||||| |||||| |||| ||  || ||||||||||| |||||| |  ||| |||||||||||||    
T  45255491 catcaacttcgtccctgaatttttacggatcggtcaacttcatcactcaattatgcaaaatattactttaatccctgaatttgt 45255574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 46611382 - 46611303
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||   |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  46611382 tcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 54900153 - 54900074
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| || ||||||||||||    
T  54900153 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 486
Target Start/End: Original strand, 46197761 - 46197855
Alignment:
Q  392 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    ||||||| ||| || |||| ||| ||||||| | ||||| |||||||||  ||||||||||| |||| ||||||| ||| |||| |||| |||||    
T  46197761 tcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttag 46197855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 23291582 - 23291659
Alignment:
Q  363 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||| ||||||||    
T  23291582 aaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 475
Target Start/End: Complemental strand, 23293258 - 23293190
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||| ||||||||||| | ||||||| |||||||  || |||||||||||||  |||||||||| ||||    
T  23293258 aattttgcgaaatatctatttagtccatgaattttacaaacgtccatcaaaatagtccctccgtccaaa 23293190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 38191944 - 38191984
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  38191944 gtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 442
Target Start/End: Complemental strand, 41946155 - 41946099
Alignment:
Q  386 gatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| |||||||||||||||||||   |||||||||||  |||||| |||||||||    
T  41946155 gatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgt 41946099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 486
Target Start/End: Complemental strand, 44276265 - 44276205
Alignment:
Q  426 ttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    ||||||| |||||||  |||||| ||||||||| ||||||||||| |||| | ||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttag 44276205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 486
Target Start/End: Complemental strand, 48830887 - 48830815
Alignment:
Q  414 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    ||||||||| | ||||||  |||||||  | |||||||||||||| ||||||||||| |||| | ||||||||    
T  48830887 cgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttag 48830815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 348 - 488
Target Start/End: Complemental strand, 42897901 - 42897761
Alignment:
Q  348 tttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 447  Q
    |||||||| |||||||||| |||||||||||||||| || |||  |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42897901 tttgagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagac 42897802  T
Q  448 gtccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||||||||||||||||| ||| || ||||||||||    
T  42897801 gtccatcaaaaaggtccctccgtccaagtgctctgttagcc 42897761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 487
Target Start/End: Original strand, 32822360 - 32822497
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||| |||||||||||||||||||||||||  ||||||  ||||||||||||   ||||||||||||||||||||||||||||||| ||    
T  32822360 tgagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgt 32822459  T
Q  450 ccatcaaaaaggtccctccgtacaaatgttctgttagc 487  Q
    ||||||||||||||| ||||| ||| || | |||||||    
T  32822460 ccatcaaaaaggtccttccgtccaagtgctttgttagc 32822497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 462494 - 462357
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||||||||| |||||||||||  |||||  ||||||  ||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  462494 gagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtc 462395  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||| ||||||| | ||| || ||||||||||    
T  462394 catcaaaaagatccctccatccaagtgctctgttagcc 462357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 37526148 - 37526028
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| ||||||||||||||||||||||||| | |  ||| |||||||  | | |||||||||||||||||||||||||||||||||||| |||||| |    
T  37526148 tgagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaatttttcagacat 37526049  T
Q  450 ccatcaaaaaggtccctccgt 470  Q
    |||||||||||||||||||||    
T  37526048 ccatcaaaaaggtccctccgt 37526028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 350 - 488
Target Start/End: Original strand, 31821417 - 31821555
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| || ||||||||||||| |||||||| |    ||| |||| || |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  31821417 tgagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgt 31821516  T
Q  450 ccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||||||||||||||| ||| |  ||||||||||    
T  31821517 ccatcaaaaaggtccctccgtccaagtcctctgttagcc 31821555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 38882922 - 38882784
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| ||||||||||||||||||||||||| | |||||| |||||||  ||| |||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  38882922 tgagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgt 38882823  T
Q  450 ccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||| ||||| |||||||||| ||| || || |||||||    
T  38882822 ccataaaaaatgtccctccgtccaagtgctccgttagcc 38882784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 357 - 468
Target Start/End: Complemental strand, 33160266 - 33160155
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    ||||||||||||||||||||||||| |  | |||  ||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  33160266 accatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaa 33160167  T
Q  457 aaaggtccctcc 468  Q
    ||||||||||||    
T  33160166 aaaggtccctcc 33160155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 487
Target Start/End: Complemental strand, 33750459 - 33750372
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagc 487  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| || |||||||||    
T  33750459 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaagtgctctgttagc 33750372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 346 - 470
Target Start/End: Complemental strand, 31201272 - 31201148
Alignment:
Q  346 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 445  Q
    |||| ||||| |||||||| || |||| |||||||| | || |||  |||||| |||| |||||||||||||||||||| ||| ||||||||||| ||||    
T  31201272 ttttcgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcag 31201173  T
Q  446 acgtccatcaaaaaggtccctccgt 470  Q
    |||||||||||||||||||||||||    
T  31201172 acgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 351 - 480
Target Start/End: Original strand, 1320617 - 1320746
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||||| |||||| |||||| | || |||   |||||  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtc 1320716  T
Q  451 catcaaaaaggtccctccgtacaaatgttc 480  Q
    ||| || ||||||| ||||| ||| |||||    
T  1320717 cataaataaggtccttccgtccaagtgttc 1320746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 477
Target Start/End: Original strand, 9184382 - 9184509
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| | |||||| |||||||||||||||  | | ||||  |||||| ||| | ||| || |||||||||||| ||||||||||||||||||||||||    
T  9184382 tgagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgt 9184481  T
Q  450 ccatcaaaaaggtccctccgtacaaatg 477  Q
    | ||| ||| ||||||||||| ||||||    
T  9184482 cgatcgaaatggtccctccgtccaaatg 9184509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 8609921 - 8609807
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||||||||| |||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  8609921 tcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 8609822  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  8609821 gtccctccgtccaaa 8609807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 13108470 - 13108356
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||   ||||  |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||| |    
T  13108470 tcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 13108371  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  13108370 gtccctccgtccaaa 13108356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 13282488 - 13282602
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  13282488 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 13282587  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  13282588 gtccctccgtccaaa 13282602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 25707384 - 25707287
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    |||||| ||| ||||| |||||||| | ||||  ||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  25707384 catcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaacttaatccctgaatttgtgagacgtcaatcaa 25707287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 27691164 - 27691278
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||       
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcc 27691263  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  27691264 gtccctccgtccaaa 27691278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 8654500 - 8654636
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||  |||||||||| |  ||| ||||||| || |||||||||||||||||||||  ||| | | ||||||| |||||||||    
T  8654500 gagtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgttcctcaattatgcgaaatatcat-ttaattcttgaatttatcagacgtc 8654598  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||| ||||||||||| ||| || || |||||||    
T  8654599 catcaaaagggtccctccgtccaagtgctccgttagcc 8654636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 25373705 - 25373608
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    |||||| ||| |||||||||||| | | ||||  ||||||  | |||||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  25373705 catcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaacttaattcctgaatttgtcagacgtcaatcaa 25373608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 486
Target Start/End: Complemental strand, 41825778 - 41825653
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||| |  ||||| |||| | |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  41825778 tcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 41825679  T
Q  461 gtccctccgtacaaatgttctgttag 486  Q
    ||| |||||| |||| | ||||||||    
T  41825678 gtcactccgtccaaaagctctgttag 41825653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 31823572 - 31823476
Alignment:
Q  346 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||||||| |||||| ||||||| |||||||| | || |||  ||| || ||||||||||||||||||||||||| ||| ||||| |||||||    
T  31823572 tttttgagtggatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgt 31823476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 40019155 - 40019247
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| | |||||| |||||| ||||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  40019155 tgagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 40019247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 361 - 468
Target Start/End: Original strand, 38547238 - 38547345
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||| |||||||||||||||| |   ||||  |||||  |||| | |||| ||||||||||||| |||||||||||||||  |||||||||||||||| |    
T  38547238 tcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 38547337  T
Q  461 gtccctcc 468  Q
    ||||||||    
T  38547338 gtccctcc 38547345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 26242416 - 26242334
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||||| |||| ||||||||||| | |||||| ||||||||  |||||||||||||||| ||||||||||| ||||    
T  26242416 caaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtccaaa 26242334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 41042686 - 41042604
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    ||||||||||||| |||| || |||||||| | |||||||||||||||  ||| |||||||||||| ||||||||||| ||||    
T  41042686 caaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaa 41042604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 454
Target Start/End: Complemental strand, 28433834 - 28433737
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatc 454  Q
    |||||||| ||||||| |||||||| | ||||||  |||||| |||||||||||   |||||||||||  ||||||||||||||||  ||||||||||    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatc 28433737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 475
Target Start/End: Original strand, 15305838 - 15305921
Alignment:
Q  392 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||| ||||||||| ||||||  |||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  15305838 tcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaa 15305921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 475
Target Start/End: Original strand, 15486207 - 15486290
Alignment:
Q  392 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||| ||||||||| ||||||  |||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  15486207 tcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaa 15486290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 33368767 - 33368850
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||||||||| ||||||||||| | |||| || ||||  || ||||||||||||||||||||| ||| ||| |||||||||    
T  33368767 catcaaattcgtctttgaatttttacgaatcggtcgaattcatctctcaattatgcgaaatatcaatttaatccttgaatttgt 33368850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 42894784 - 42894867
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| || ||| ||||||||| | || |||| |||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  42894784 catcaactttgtctttgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 42894867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 467
Target Start/End: Complemental strand, 13486233 - 13486127
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||| || ||||||||||||   |||| ||| ||| ||| ||  ||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  13486233 tcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 13486134  T
Q  461 gtccctc 467  Q
    |||||||    
T  13486133 gtccctc 13486127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 9673266 - 9673190
Alignment:
Q  394 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 470  Q
    ||||| |||||| |||| || |||||||| | ||| |||||||||||  |||||||||||||||| |||||||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 9673190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 461184 - 461267
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| |||||||||||||||| | || |||  ||||||  ||||||||||||| |||||| ||| ||| |||||||||||||    
T  461184 catcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaatttgt 461267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 476
Target Start/End: Original strand, 5036455 - 5036570
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||||||||||||| |||||| |   |||  ||||||| |||||| |||| || |||||||| | ||||||| |||||||  |||||||| ||||||| |    
T  5036455 tcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtctatcaaaatg 5036554  T
Q  461 gtccctccgtacaaat 476  Q
    ||| |||||| |||||    
T  5036555 gtctctccgtccaaat 5036570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 29237161 - 29237240
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  29237161 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 33707216 - 33707295
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  33707216 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 35509224 - 35509303
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||| ||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  35509224 tcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 42943505 - 42943426
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||    
T  42943505 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 440
Target Start/End: Complemental strand, 13284073 - 13283995
Alignment:
Q  362 caaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||||||||||||||||| |   ||||  ||| ||||||||| |||| ||||||||||||| ||||||| |||||||    
T  13284073 caaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 42941784 - 42941898
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||   |||||| |||||| |||| || |||||||  | |||||||||||||||  |||| |||||||||||      
T  42941784 tcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccatcaaaata 42941883  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  42941884 gtccctccgtccaaa 42941898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 32824320 - 32824271
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||||||||| ||| || ||||||||||    
T  32824320 caaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgt 32824271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 468
Target Start/End: Original strand, 22272377 - 22272453
Alignment:
Q  392 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 468  Q
    ||||||| |||||| |||| |||| |||||| | |||||||||||||||  || |||||||||||||  ||||||||    
T  22272377 tcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacgtccatcaaaatagtccctcc 22272453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 37524873 - 37524949
Alignment:
Q  366 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||||||||||||| || ||| |||||||  ||||| ||||||| ||||||||||  || || ||||||||||    
T  37524873 ttcgtccttgaatttttacgggtcggtcaaattcatcccttaattatgtgaaatatcaatctaatctctgaatttgt 37524949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 601783 - 601704
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  601783 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 1322365 - 1322314
Alignment:
Q  391 atcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| || ||||||||||||||| ||||||||| ||| |||||||||||||    
T  1322365 atcaacttcgtccctcaattatgcaaaatatcaatttaatccctgaatttgt 1322314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 27692916 - 27692837
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||| ||||||||| |||||||||||||||    
T  27692916 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 29239266 - 29239187
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  29239266 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 33708899 - 33708824
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||| |||||||||| || |||||||||||||||  || ||||||||||||   |||||||||| ||||    
T  33708899 gtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgtccaaa 33708824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 33748340 - 33748423
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | || |||  ||| || |||| |||||||||||||||||||| ||| | |||||||||||    
T  33748340 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaattcctgaatttgt 33748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 33762792 - 33762713
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  33762792 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 35510898 - 35510819
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||| | |||| || |||||||||| |||||||||||||||    
T  35510898 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaattt 35510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 38548910 - 38548831
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| ||| |||||||||||    
T  38548910 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 8608249 - 8608327
Alignment:
Q  363 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaa-ttatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||| |   |||| |||| || |||||| || || ||||||||||||| |||||||||||||||    
T  8608249 aaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattt 8608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 442
Target Start/End: Original strand, 24526945 - 24526987
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||||||||| |||||||||| ||| |||||||||||||    
T  24526945 gtccctcaattatgtgaaatatcaatttaatccctgaatttgt 24526987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 9671989 - 9672066
Alignment:
Q  363 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||| |   ||| |||||||| |||| | |||| ||||||||||| | |||||||| ||||||    
T  9671989 aaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 31199527 - 31199576
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| |||||| ||||||| |||||||||| ||| |||||||||||||    
T  31199527 caaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgt 31199576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 38881436 - 38881501
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaa 424  Q
    ||||||||||||||||||||||| | | |||   ||||||  ||||||||||||||||||| ||||    
T  38881436 catcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaa 38881501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 40020759 - 40020654
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| ||||||| ||||| |||| || ||   |||||| |||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  40020759 gagtgaaccatcaatttcgtccctgaatctttaggggtctgccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 40020660  T
Q  451 catcaa 456  Q
    ||||||    
T  40020659 catcaa 40020654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 15308301 - 15308261
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| |||||| ||||||||||| |||||||||||||||    
T  15308301 gtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 15488670 - 15488630
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| |||||| ||||||||||| |||||||||||||||    
T  15488670 gtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 33761118 - 33761158
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  33761118 gtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 7e-44; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 346 - 488
Target Start/End: Original strand, 42134477 - 42134619
Alignment:
Q  346 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 445  Q
    |||| ||||| ||||||||||||||||||||||||||| || |||  |||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  42134477 ttttagagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 42134576  T
Q  446 acgtccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||||||||||||||||||| ||| || || |||||||    
T  42134577 acgtccatcaaaaaggtccctccgtccaagtgctccgttagcc 42134619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 18184067 - 18183952
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||||||||| ||||||||||| || |||  |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18184067 gagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18183968  T
Q  451 catcaaaaaggtccct 466  Q
    ||||||||| ||||||    
T  18183967 catcaaaaatgtccct 18183952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 36895635 - 36895497
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| ||||||||||| |||| |||||||| | |  ||| |||| || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36895635 tgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 36895536  T
Q  450 ccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||||||||||| ||| ||| || || |||||||    
T  36895535 ccatcaaaaaggtcccttcgtccaagtgctccgttagcc 36895497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 351 - 487
Target Start/End: Complemental strand, 35480099 - 35479963
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| |||||||||||||||| | |||||   ||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgtc 35480000  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagc 487  Q
    |||||||||||||| ||||| ||| || |||||||||    
T  35479999 catcaaaaaggtccttccgtccaagtgctctgttagc 35479963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 349 - 488
Target Start/End: Complemental strand, 46638933 - 46638794
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| |||||||||||||| | |||||||| | |  |||  ||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  46638933 ttgagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacg 46638834  T
Q  449 tccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||| ||||||||||||||||| ||| || || |||||||    
T  46638833 tccaccaaaaaggtccctccgtccaagtgctccgttagcc 46638794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 346 - 470
Target Start/End: Complemental strand, 47269585 - 47269461
Alignment:
Q  346 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcag 445  Q
    |||||||||| |||||||||||||||| |||||||| | |  |||  |||||| ||||||||||||| |||||| |||| ||  |||||||||||||||     
T  47269585 tttttgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaa 47269486  T
Q  446 acgtccatcaaaaaggtccctccgt 470  Q
    |||||||||||||||||||||||||    
T  47269485 acgtccatcaaaaaggtccctccgt 47269461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 488
Target Start/End: Complemental strand, 45381092 - 45380971
Alignment:
Q  367 tcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccct 466  Q
    |||||||| |||||||| ||   | |||||||  |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||    
T  45381092 tcgtccttaaatttttacgggaaggtcaaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcct 45380993  T
Q  467 ccgtacaaatgttctgttagcc 488  Q
    |||| ||| || || |||||||    
T  45380992 ccgtccaagtgctccgttagcc 45380971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 31801682 - 31801770
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||| || || |||||||    
T  31801682 gtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaaggtccctccgtccaagtgctccgttagcc 31801770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 27940608 - 27940727
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||| |||||||| |  | | | ||||||| ||||||||||||||||||||||||| ||| ||| ||||||| |||||||||    
T  27940608 gagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtc 27940707  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  27940708 catcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 44157433 - 44157552
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||| |||||||| |||||| | || |||  ||||||  |||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  44157433 gagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgtc 44157532  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||| ||||| |||| |||||    
T  44157533 cataaaaaaagtccttccgt 44157552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 4856080 - 4855966
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||  |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||| |    
T  4856080 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 4855981  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  4855980 gtccctccgtccaaa 4855966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 46583670 - 46583556
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| |||| ||||||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||       
T  46583670 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattt 46583571  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  46583570 gtccctccgtccaaa 46583556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 361 - 486
Target Start/End: Original strand, 2869589 - 2869714
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||| || |||||  |||||||||||||||| |    
T  2869589 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtccatcaaaatg 2869688  T
Q  461 gtccctccgtacaaatgttctgttag 486  Q
    |||||||||| |||| | ||||||||    
T  2869689 gtccctccgtccaaaagctctgttag 2869714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 33685372 - 33685265
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||| |||||||||| || ||| |||||||  |||||||||||||||||||||||| ||| ||  ||||||||||| |  ||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttaatcattgaatttgtcacatctc 33685273  T
Q  451 catcaaaa 458  Q
    ||||||||    
T  33685272 catcaaaa 33685265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 34778252 - 34778138
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||  |||||| |||| ||||||||||||| |||||||||||||||  |||| ||||||||||| |    
T  34778252 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatg 34778153  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  34778152 gtccctccgtccaaa 34778138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 31238609 - 31238506
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||| ||||||||||||| |   ||||  ||||||||||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  31238609 tcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 31238510  T
Q  461 gtcc 464  Q
    ||||    
T  31238509 gtcc 31238506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 25278482 - 25278368
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||| | | ||||||| |||||||  || ||||||||||||| |    
T  25278482 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtccatcaaaatg 25278383  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  25278382 gtccctccgtccaaa 25278368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 27087293 - 27087407
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||||||||||||| |||||| |   |||| |||||||||||||| |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  27087293 tcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 27087392  T
Q  461 gtccctccgtacaaa 475  Q
    | || ||||| ||||    
T  27087393 gcccatccgtccaaa 27087407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 486
Target Start/End: Complemental strand, 51896235 - 51896141
Alignment:
Q  392 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||||||||||||| |||| ||||||||||| | |||||||||||||||  |||| |||||||||||  |||||||||| |||| | ||||||||    
T  51896235 tcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctccgtccaaaagctctgttag 51896141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 5784950 - 5784867
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | || ||| |||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  5784950 catcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 5784867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 33602758 - 33602644
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| || |||||||||| |||||||||||||||  ||||||||| |||||       
T  33602758 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgtcaaatta 33602659  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  33602658 gtccctccgtccaaa 33602644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 37344352 - 37344466
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||| | | ||||||  |||||||  || ||||||||||||| |    
T  37344352 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtccatcaaaatg 37344451  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  37344452 gtccctccgtccaaa 37344466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 26223597 - 26223676
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  26223597 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 31236829 - 31236908
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||||||||||||| |||| ||||||||||| | ||||| |||||||||    
T  31236829 tcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 42136327 - 42136244
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||| | | ||||||||||||||| |||| || |||| | |||||||||||||||||| ||| |||||||||||||    
T  42136327 catcaacttcgttcctaaatttttatggatcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaatttgt 42136244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 470
Target Start/End: Original strand, 6575261 - 6575311
Alignment:
Q  420 atcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 470  Q
    |||||||||||||||||||||||||||| || ||||||||||||| |||||    
T  6575261 atcaacttagtccctgaatttgtcagacatctatcaaaaaggtccttccgt 6575311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 6818792 - 6818678
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||| | ||||||  |||  || ||||||| | |||||||||||||||  |||||||||||||||| |    
T  6818792 tcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 6818693  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  6818692 gtccctccgtccaaa 6818678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 15104483 - 15104565
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| || ||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| ||||| ||||| ||||    
T  15104483 caaattcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaa 15104565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 50556211 - 50556097
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||| ||||||||| |   |||  ||||||| ||| || |||| ||||||||||| | ||||||||| |||||  |||||||| ||||||| |    
T  50556211 tcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtctatcaaaatg 50556112  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  50556111 gtccctccgtccaaa 50556097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 27952549 - 27952500
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  27952549 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 27952500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 3013590 - 3013498
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 453  Q
    ||||||||||||||||||||| |   |||  ||||||| |||| | |||| ||||||||||| | |||||||||||||||  |||||||||||    
T  3013590 tcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 3013498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 11152544 - 11152636
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| | |||||| ||||||| |||||||| | || |||  ||| || ||||||||||||||||||||||||| ||| |||| ||||||||    
T  11152544 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgt 11152636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 31803792 - 31803700
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| | |||||| ||||||| |||||||| | || |||  ||| || |||| |||||||||||||||||||| ||| |||||||||||||    
T  31803792 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 31803700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 4854420 - 4854499
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||| ||||| |||||||||||||||    
T  4854420 tcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 9121743 - 9121668
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  9121743 gtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 9121668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 33679267 - 33679350
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| || |||| |||||||||| || ||   |||||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  33679267 catcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 33679350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 37346041 - 37345962
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||| ||| ||  ||||| |||| ||||||||||||| |||||||||||||||    
T  37346041 tcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 486
Target Start/End: Original strand, 51121961 - 51122040
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||| ||| ||||||||| || |||||||||||| ||  ||||||||||||| ||||||||||| |||| | ||||||||    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttag 51122040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 456
Target Start/End: Original strand, 5783364 - 5783469
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| ||||||| |||||||||| || |||  ||||||  || | |||||   |||||||||||  ||||||||||||||||  ||||||    
T  5783364 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5783463  T
Q  451 catcaa 456  Q
    ||||||    
T  5783464 catcaa 5783469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 6577188 - 6577107
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| ||||||| |||  |||||||| |||   ||||| |||| |||||||||||||||||||| ||| |||||||||||    
T  6577188 catcaacttcgtccctgacattttatgggtcggctaaattagtccttcaattatgcgaaatatcaatttaatccctgaattt 6577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 440
Target Start/End: Original strand, 35478095 - 35478176
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| ||| ||| |||||||| | || |||  |||||| ||||||||||||||| ||||||||| ||| |||||||||||    
T  35478095 catcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaattt 35478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 25279067 - 25278975
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 453  Q
    ||||||||||||||||||||| |   |||   |||||| || ||| |||| ||||||||||| | |||||||||||||||  |||||||||||    
T  25279067 tcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 34776579 - 34776658
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  34776579 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 44159377 - 44159294
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| |  ||||| |||| || |||||| |||||||| ||||||||| ||| | |||||||||||    
T  44159377 catcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaatttgt 44159294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 45379093 - 45379176
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | || |||  ||| || |||||| |||||||||||||||||| ||| ||||| |||||||    
T  45379093 catcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaatttgt 45379176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 46582020 - 46582099
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||| ||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  46582020 tcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 47013157 - 47013082
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||| | ||||||||||| |||||||||||||||  || ||||||||||||   |||||||||| ||||    
T  47013157 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgtccaaa 47013082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 33599229 - 33599307
Alignment:
Q  362 caaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||||||||||||||||| |   |||| ||||||| |||| | |||| ||||||||||||| ||| || ||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 438
Target Start/End: Original strand, 8167952 - 8168029
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaat 438  Q
    ||||||||||||||||||||| |   ||||  ||| || ||| || |||| ||||||||||||| |||||||||||||    
T  8167952 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 18180550 - 18180591
Alignment:
Q  401 tccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||||||||||||||||||| ||| | |||||||||||    
T  18180550 tccctcaattatgcgaaatatcaatttaattcctgaatttgt 18180591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 440
Target Start/End: Original strand, 51894575 - 51894656
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||||||||| |||||||||| |   || | ||||||||||| || |||| ||||||||||  | |||||||||||||||    
T  51894575 catcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 47264123 - 47264215
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| |||||||| || |||| |||||||| | |  |||  ||| || |||||||||||||||||||| |||| ||  |||||||||||||    
T  47264123 tgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 47264215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 7e-41; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 37417273 - 37417410
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||| ||||||||||||||||| |||| |||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 37417372  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||||||||| ||| ||| || || |||||||    
T  37417373 catcaaaaaggtcccttcgtccaagtgctccgttagcc 37417410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 352 - 468
Target Start/End: Original strand, 25619661 - 25619777
Alignment:
Q  352 agtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtcc 451  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||| ||||||||||||||||||||||||||||| | ||||    
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtcc 25619760  T
Q  452 atcaaaaaggtccctcc 468  Q
    |||||||||||||||||    
T  25619761 atcaaaaaggtccctcc 25619777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 29909784 - 29909647
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||||| |||| |||||||| | |  |||  ||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtc 29909685  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||||||||||||| ||| || ||||||||||    
T  29909684 catcaaaaaggtccctccgtccaagtgctctgttagcc 29909647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 351 - 462
Target Start/End: Original strand, 15432328 - 15432439
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||  ||||||||||||||||| ||| |||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15432328 gagtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtc 15432427  T
Q  451 catcaaaaaggt 462  Q
    ||||||||||||    
T  15432428 catcaaaaaggt 15432439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 357 - 486
Target Start/End: Original strand, 42879362 - 42879490
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    |||||||||||||||||| |||||||| || ||| |||||||  ||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  42879362 accatcaaattcgtccttaaatttttacgggtcggtcaaattcatcccttaattatgcgaaa-atcaacttagtctatgaatttgtcagacgtccatcaa 42879460  T
Q  457 aaaggtccctccgtacaaatgttctgttag 486  Q
    |||||||||||||| ||| ||||| |||||    
T  42879461 aaaggtccctccgtccaagtgttccgttag 42879490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 397 - 488
Target Start/End: Complemental strand, 39475 - 39384
Alignment:
Q  397 tttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||||| |||||||    
T  39475 tttgtacctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaagtgttccgttagcc 39384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 16763086 - 16763200
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||||||||||||||||||||||   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  16763086 tcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 16763185  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  16763186 gtccctccgtccaaa 16763200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 15372498 - 15372618
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||| || |||| |||||||| | || |||  |||||| | ||||||||||||| ||||||||| ||| ||||||||||| ||||||||    
T  15372498 tgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgt 15372597  T
Q  450 ccatcaaaaaggtccctccgt 470  Q
    |||||||||||||||||||||    
T  15372598 ccatcaaaaaggtccctccgt 15372618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 41706539 - 41706658
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || || | |||||||| | || ||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||  |||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtc 41706638  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  41706639 catcaaaaaggtccctccgt 41706658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 357 - 470
Target Start/End: Original strand, 39562 - 39675
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    |||||||| || |||| |||||||||| || |||  |||||| ||||||||||||||||||||||||| ||| ||||||||||| |||| |||| || ||    
T  39562 accatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgattaa 39661  T
Q  457 aaaggtccctccgt 470  Q
    ||||||||||||||    
T  39662 aaaggtccctccgt 39675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 92470 - 92334
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||||||||||| |||| |||||||| | | |||  |||| || || |||||||||||||||||||||||||||||  ||||||||||||||||     
T  92470 gagtgaaccatcaaatt-gtccctgaattttcacgcatcagtcaacttcgtacctcaattatgcgaaatatcaacttagtctttgaatttgtcagacgtt 92372  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||||||||||| || ||| || || |||||||    
T  92371 catcaaaaaggtccctcagtccaagtgctccgttagcc 92334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 462
Target Start/End: Original strand, 42001609 - 42001720
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| ||||||||||||||||||||||||||| || | |  ||||||| |||||| ||||||||||||||||| ||| ||| |||||||||||||| |    
T  42001609 tgagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaatttaatccttgaatttgtcagacat 42001708  T
Q  450 ccatcaaaaaggt 462  Q
     ||||||||||||    
T  42001709 -catcaaaaaggt 42001720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 359 - 482
Target Start/End: Complemental strand, 11315451 - 11315328
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 458  Q
    |||||| ||||||||| |||||||||| ||||  |||||| || ||  ||||   |||||||||||  |||| |||||||||||||||||||||||||||    
T  11315451 catcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaa 11315352  T
Q  459 aggtccctccgtacaaatgttctg 482  Q
     ||||||||||| |||||||||||    
T  11315351 tggtccctccgtccaaatgttctg 11315328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 40560265 - 40560358
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||||| |||||| |||| ||||||||||| | |||||||||||||||  ||||||||||||||||  |||||||||| |||| ||||||||||    
T  40560265 caaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatagtccctccgtccaaaagttctgttag 40560358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 467
Target Start/End: Original strand, 2766944 - 2767050
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||||||||||||||||||||||   |||| ||||| | |||| | |||| ||||||||||| | |||||||||||||||  |||||||| ||||||| |    
T  2766944 tcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtctatcaaaatg 2767043  T
Q  461 gtccctc 467  Q
    |||||||    
T  2767044 gtccctc 2767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 39664882 - 39664768
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||  |||| | ||||||||| | |||||||||||||||  |||||||||||||||| |    
T  39664882 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 39664783  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  39664782 gtccctccgtccaaa 39664768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 361453 - 361550
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    |||||| |||||||||||||||| ||| ||||  |||| |  ||||||||||||| |||||||||| ||||||  |||||| ||||||||||||||||    
T  361453 catcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtccatcaa 361550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 28248267 - 28248175
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| | |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  28248267 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 28248175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 440
Target Start/End: Complemental strand, 41234 - 41144
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||| | |||||| ||||||| |||||||| | || |||  |||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  41234 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 14389218 - 14389104
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||| ||||||||| |   ||||  |||||| |||||| |||| ||||||||||| | |||||||||||||||  || | ||||||||||| |    
T  14389218 tcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatg 14389119  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  14389118 gtccctccgtccaaa 14389104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 44709879 - 44709765
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   | ||  |||||| | |||| |||| ||||||||| | | |||||||||||||||  |||||||||||||||| |    
T  44709879 tcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtccatcaaaatg 44709780  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  44709779 gtccctccgtccaaa 44709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 475
Target Start/End: Complemental strand, 16377306 - 16377217
Alignment:
Q  386 gatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    ||||| |||||||||||||| |||| ||| ||||||| | ||||||| |||||||  || ||||||||||||| ||||||||||| ||||    
T  16377306 gatcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaa 16377217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 468
Target Start/End: Complemental strand, 42519340 - 42519232
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattat-gcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaa 459  Q
    ||||||||||||||||||||| |   || ||||||||| |||| | |||| | || ||||||| | |||||||||||||||  ||||||||||||||||     
T  42519340 tcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaat 42519241  T
Q  460 ggtccctcc 468  Q
    |||||||||    
T  42519240 ggtccctcc 42519232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 11021541 - 11021624
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  11021541 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 11021624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 19908381 - 19908266
Alignment:
Q  361 tcaaattcgtccttgaatttttatgga-tcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaa 459  Q
    ||||||||||||||||||||| |   | |||  |||||| |||||| |||| ||||||||||| | ||||||| |||||||  ||||||||| ||||||     
T  19908381 tcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaat 19908282  T
Q  460 ggtccctccgtacaaa 475  Q
    ||||||||||| ||||    
T  19908281 ggtccctccgtccaaa 19908266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 24208137 - 24208062
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||||| ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  24208137 gtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaa 24208062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 42880894 - 42880811
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||||| || ||| ||||||| |||||| |||||||||||||||||| ||| ||| | |||||||    
T  42880894 catcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccataaatttgt 42880811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 444
Target Start/End: Complemental strand, 20942074 - 20941989
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtca 444  Q
    |||||||||||||||||||||| || |||||| |||||||||||||  ||||   ||||||||||  |||||| || |||||||||    
T  20942074 catcaaattcgtccttgaatttgtaaggatcggtcaaatttgtcccctaatttgtcgaaatatcacattagtctctaaatttgtca 20941989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 41708479 - 41708430
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  41708479 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 41708430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 42003566 - 42003490
Alignment:
Q  366 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| |||||||||||| |||||  ||||||| || | |||||||||||||||||||| ||| || ||||||||||    
T  42003566 ttcgttcttgaatttttaaggatcagtcaaattcgttcatcaattatgcgaaatatcaatttaatctctgaatttgt 42003490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 6786076 - 6786001
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| ||||||  |||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  6786076 gtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaa 6786001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 16764690 - 16764611
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  16764690 tcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 475
Target Start/End: Original strand, 37020526 - 37020632
Alignment:
Q  369 gtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 468  Q
    ||||||||||||| |   |||| |||| ||||||| | |||| |  |||||||||| |||||||||||||||  |||||||||||||||   ||||||||    
T  37020526 gtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 37020625  T
Q  469 gtacaaa 475  Q
    || ||||    
T  37020626 gtccaaa 37020632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 456
Target Start/End: Original strand, 28246663 - 28246768
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| ||||||| |||||||||| || |||  |||||| |||||  ||||   |||||||||||  |||| |||||||||||  ||||||    
T  28246663 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtttgacgtc 28246762  T
Q  451 catcaa 456  Q
    ||||||    
T  28246763 catcaa 28246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 39663166 - 39663243
Alignment:
Q  363 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    |||||||||||||||||||||   |||| ||||||| |||||| |||| ||| ||||| | | |||||||||||||||    
T  39663166 aaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 456
Target Start/End: Original strand, 38148501 - 38148601
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatc-aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatca 455  Q
    |||||||| ||||||| |||||||| |  |||||  | ||||||||||| |||||   |||||||||||  ||||||||||||||||  |||||||||||    
T  38148501 accatcaatttcgtccctgaattttcagagatcgggccaaatttgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatca 38148600  T
Q  456 a 456  Q
    |    
T  38148601 a 38148601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 33201 - 33284
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | || |||  ||| || |||| ||||||||| |||||||||| ||| |||||||||||||    
T  33201 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaatttgt 33284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 485
Target Start/End: Original strand, 6797550 - 6797641
Alignment:
Q  394 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgtta 485  Q
    ||||| || ||| |||| ||||||||||| | ||||||||| |||||  |||||||| ||||||| ||| ||||||| |||| | |||||||    
T  6797550 aaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatggttcctccgtccaaaagctctgtta 6797641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 456
Target Start/End: Complemental strand, 11023130 - 11023032
Alignment:
Q  357 accatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    |||||||| ||||||| |||||||| | || |||  |||||| ||||| |||||   |||||||||||  ||||||||||||||||  ||||||||||||    
T  11023130 accatcaatttcgtccctgaattttcaggg-tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaa 11023032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 14387359 - 14387438
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| | ||||||||||| |||||||||||||||    
T  14387359 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 15373991 - 15373888
Alignment:
Q  339 atatatatttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaat 438  Q
    |||||| |||||||||| | |||||| || |||| |||||| | |  | |||  |||||| || |||||||||||||||||||||| ||| | |||||||    
T  15373991 atatatttttttgagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaat 15373892  T
Q  439 ttgt 442  Q
    ||||    
T  15373891 ttgt 15373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 17696216 - 17696330
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  ||||||  ||||| |||| ||  ||||||| | |||||||||||||||  || ||||| ||||||| |    
T  17696216 tcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaatcaaaatg 17696315  T
Q  461 gtccctccgtacaaa 475  Q
    ||| |||||| ||||    
T  17696316 gtcactccgtccaaa 17696330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 433
Target Start/End: Original strand, 19906694 - 19906764
Alignment:
Q  363 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccc 433  Q
    ||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | ||||||||    
T  19906694 aaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccc 19906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 7744099 - 7744160
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 468  Q
    |||| ||||||||||||| || |||||||||||| ||  | ||||||||||| |||||||||    
T  7744099 aattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctcc 7744160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 17946150 - 17946218
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||| ||| ||||||||| || |||||||||||| ||  | ||||||||||| ||||||||||| ||||    
T  17946150 aattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatggtccctccgtccaaa 17946218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 457
Target Start/End: Original strand, 19581424 - 19581520
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 457  Q
    |||||||||||||| ||||||||   |||   ||||||||||||| |||| ||||||||||| | |||||||  ||||||  || | ||||||||||    
T  19581424 tcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtccatcaaa 19581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 39455225 - 39455293
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||| ||| ||||||| | ||||||| |||||||  |||||||||||||||| |||| |||||| ||||    
T  39455225 aattttgcaaaatatctatttagtccatgaattttacagacgtccatcaaaatggtctctccgttcaaa 39455293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 44558618 - 44558480
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||| |||||||||||||||| | || |||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44558618 tgagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 44558519  T
Q  450 ccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||||||||| ||||| ||| || | ||||||||    
T  44558518 ccatcaaaaaggtccttccgtccaagtgctatgttagcc 44558480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 10372831 - 10372711
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||||||||||| |||||||| | |  |||  |||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  10372831 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgt 10372732  T
Q  450 ccatcaaaaaggtccctccgt 470  Q
    |||||||||||||||||||||    
T  10372731 ccatcaaaaaggtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 47941811 - 47941930
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||| |||||||||| || ||| ||||||| ||| ||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 47941910  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  47941911 catcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 10762580 - 10762700
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||||||||||| |||||||| | |  |||  |||||| |||||||||||||||||||| |||| ||  ||||||||||||||||||||    
T  10762580 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 10762679  T
Q  450 ccatcaaaaaggtccctccgt 470  Q
    |||||||||||||||||||||    
T  10762680 ccatcaaaaaggtccctccgt 10762700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 349 - 468
Target Start/End: Complemental strand, 51042056 - 51041938
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| ||| |||||||||||||| ||||||||  | ||| |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  51042056 ttgagtgaaccgtcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgtgaaatatcaacttagtccatgaatttgtcagacg 51041957  T
Q  449 tccatcaaaaaggtccctcc 468  Q
    | ||||||||||||||||||    
T  51041956 t-catcaaaaaggtccctcc 51041938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 2350631 - 2350494
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||| |||||||| |||| |||  |||||||||||||||||||||||||||||||| ||| || |||||||| ||||||||     
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaatttatcagacgtt 2350532  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    ||||||||||||||||| || ||| || || |||||||    
T  2350531 catcaaaaaggtccctctgtccaagtgctccgttagcc 2350494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 35996063 - 35996200
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||  || |||||||||| ||| ||||||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||||    
T  35996063 gagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtc 35996162  T
Q  451 catcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    |||||||||||||||||||| ||| || || |||||||    
T  35996163 catcaaaaaggtccctccgtccaagtgctccgttagcc 35996200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 361 - 488
Target Start/End: Original strand, 27624816 - 27624943
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    |||| |||| ||||||||||||| || | | |||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27624816 tcaacttcgcccttgaatttttacgggttggtcaaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 27624915  T
Q  461 gtccctccgtacaaatgttctgttagcc 488  Q
    |||  |||||  || || ||||||||||    
T  27624916 gtcattccgtcaaagtgctctgttagcc 27624943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 351 - 470
Target Start/End: Complemental strand, 44794884 - 44794765
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||| |||||||| |    ||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 44794785  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  44794784 catcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 2827453 - 2827523
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 470  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2827453 gtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgt 2827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 349 - 488
Target Start/End: Original strand, 4519374 - 4519513
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 448  Q
    ||||||| || ||||||||||||||||||||||||  | | |  ||||||  ||||||||||||||||||||||| ||||| |  ||||||||| ||||     
T  4519374 ttgagtgaacaatcaaattcgtccttgaatttttaccggttggccaaattcatccctcaattatgcgaaatatcagcttagcctttgaatttgttagaca 4519473  T
Q  449 tccatcaaaaaggtccctccgtacaaatgttctgttagcc 488  Q
    | |||||||||||||||||||| |||||| || |||||||    
T  4519474 ttcatcaaaaaggtccctccgtccaaatgctccgttagcc 4519513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 41761860 - 41761746
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||  |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  41761860 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 41761761  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  41761760 gtccctccgtccaaa 41761746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 2828494 - 2828411
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| ||||||||||||| |||  ||| |||||||||||||||||||||||||||| ||| ||| |||||||||    
T  2828494 catcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 2828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 43778397 - 43778480
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| |||||||||||||||||| || ||| |||| || ||||||||||||||||||||||||| ||| ||||| |||||||    
T  43778397 catcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgt 43778480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 486
Target Start/End: Original strand, 51011936 - 51012061
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| |||||||  | | | |||| ||||||||||| | |||||| ||||||||  |||||||||||||||| |    
T  51011936 tcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatg 51012035  T
Q  461 gtccctccgtacaaatgttctgttag 486  Q
    |||||||||| |||| | ||||||||    
T  51012036 gtccctccgtccaaaagctctgttag 51012061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 39085244 - 39085152
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| | |||||| ||||||| |||||||||| || ||| |||| || ||||||||||||||||||||||||| ||| ||| |||||||||    
T  39085244 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgt 39085152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 39923103 - 39923007
Alignment:
Q  346 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||| ||||| |||||||| ||||||| ||||||||||  | |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  39923103 ttttggagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 39923007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 4520534 - 4520451
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||||  |||  ||||||  ||| |||||||||||||||||||||||||| | |||||||||    
T  4520534 catcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaacttagttcttgaatttgt 4520451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 41781549 - 41781663
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||| || |||||||||| |   |||| |||||||||||||| |||| ||| ||||||  | |||||||||||||||  ||||| |||||||||| |    
T  41781549 tcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacatccatcaaaatg 41781648  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  41781649 gtccctccgtccaaa 41781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 43519434 - 43519548
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||  || ||||||||||||       
T  43519434 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatcc 43519533  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  43519534 gtccctccgtccaaa 43519548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 360 - 442
Target Start/End: Original strand, 44556629 - 44556711
Alignment:
Q  360 atcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| || |||| |||||||||| || ||| ||||||| |||||||||||||| |||||||||| ||||||| |||||||||    
T  44556629 atcaactttgtccctgaatttttacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaatttgt 44556711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 44992806 - 44992899
Alignment:
Q  349 ttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||| | |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| ||||||| |||||    
T  44992806 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgt 44992899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 13451062 - 13450970
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgtta 485  Q
    |||||| ||||| |||||   |||||||||||  |||||| ||||||| ||||||||||||||||| ||||||||| | |||||| |||||||    
T  13451062 caaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaatgctctgtta 13450970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 42879274 - 42879366
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| | |||||| ||||||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| ||| |||||||||    
T  42879274 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgt 42879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 350 - 456
Target Start/End: Original strand, 39083638 - 39083744
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||| ||||||| |||||||| | || |||  |||||| |||||| ||||   |||||||||||  ||||||||||||||||  |||||    
T  39083638 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 39083737  T
Q  450 ccatcaa 456  Q
    |||||||    
T  39083738 ccatcaa 39083744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 49523134 - 49523248
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||| ||||||||| |   ||||   ||||| |||| | |||| ||||||||||| | |||||||||||||||  ||||||| |||||||| |    
T  49523134 tcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 49523233  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  49523234 gtccctccgtccaaa 49523248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 456
Target Start/End: Original strand, 5484540 - 5484645
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| ||||||| |||||||||| || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  5484540 gagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5484639  T
Q  451 catcaa 456  Q
    ||||||    
T  5484640 catcaa 5484645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 42980677 - 42980770
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    ||||||||||| | |||| | |||||| || | ||||||||| |||||  |||||||||||||||| ||||||||||| |||| | ||||||||    
T  42980677 caaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttag 42980770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 44792976 - 44793025
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  44792976 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 44793025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 230455 - 230526
Alignment:
Q  370 tccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttg 441  Q
    ||||||| ||| || ||||||  |||| | ||||||||||||||||||||||||| |||||| |||||||||    
T  230455 tccttgagtttgtaaggatcggccaaaatcgtccctcaattatgcgaaatatcaaattagtctctgaatttg 230526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 319283 - 319362
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||||||||||||| ||||| |||||||||    
T  319283 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 4169696 - 4169775
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   || |||||| || ||| || |||| ||||||||||||| |||||||||||||||    
T  4169696 tcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaattt 4169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 4173819 - 4173740
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  4173819 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 43507177 - 43507256
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  43507177 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 43508732 - 43508653
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  43508732 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 442
Target Start/End: Complemental strand, 5486150 - 5486052
Alignment:
Q  344 tatttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||| |||||||| ||||||| |||||||||| || |||  ||||||  ||||| ||||   |||||||||||  ||||||||||||||||    
T  5486150 tattttagagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgt 5486052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 456
Target Start/End: Original strand, 39921493 - 39921599
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||| ||||||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  |||||    
T  39921493 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 39921592  T
Q  450 ccatcaa 456  Q
    |||||||    
T  39921593 ccatcaa 39921599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 47942796 - 47942746
Alignment:
Q  392 tcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  47942796 tcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 47942746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 10371100 - 10371148
Alignment:
Q  394 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||||||||    
T  10371100 aaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgt 10371148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 456
Target Start/End: Original strand, 39189383 - 39189487
Alignment:
Q  352 agtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtcc 451  Q
    |||| |||||||| ||||||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  |||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtcc 39189482  T
Q  452 atcaa 456  Q
    |||||    
T  39189483 atcaa 39189487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 440
Target Start/End: Complemental strand, 835113 - 835042
Alignment:
Q  369 gtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||| |   ||||| ||| ||||||||| |||||| |||||||||||  ||||||||||||||    
T  835113 gtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaattt 835042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 33264392 - 33264471
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||| ||||||||| ||||| |||||||||    
T  33264392 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaattt 33264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 39190870 - 39190819
Alignment:
Q  391 atcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| || ||||||||||||||||||||||||| ||| ||| |||||||||    
T  39190870 atcaacttcgtccctcaattatgcgaaatatcaatttaatccgtgaatttgt 39190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 39345574 - 39345653
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  |||||| |||||| |||| ||||||||| | | |||||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 49524812 - 49524733
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||| ||||| | | |||||||||||||||    
T  49524812 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 51013965 - 51013886
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   |||| |||| || |||||| |||| ||| ||||||||| | |||||||||||||    
T  51013965 tcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaattt 51013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 27626777 - 27626728
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| |||| | |||||||||||||||||| ||| |||||||||||||    
T  27626777 caaattagtccatgaattatgcgaaatatcaatttaatccctgaatttgt 27626728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 35404526 - 35404445
Alignment:
Q  394 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    ||||| |||| |||||| ||||||||||  | ||| |||||||||||  |||||||||| ||||| ||||| ||||| ||||    
T  35404526 aaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtccaacaaaatggtccatccgtccaaa 35404445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 42880879 - 42880774
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  42880879 gagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 42880780  T
Q  451 catcaa 456  Q
    ||||||    
T  42880779 catcaa 42880774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 43779991 - 43779886
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| ||| |||| ||||||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 43779892  T
Q  451 catcaa 456  Q
    ||||||    
T  43779891 catcaa 43779886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 442
Target Start/End: Complemental strand, 15450464 - 15450416
Alignment:
Q  394 aaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||||||||||||   |||||||||||  ||||||||||||||||    
T  15450464 aaatttgtccctcaatttaacgaaatatcaaaatagtccctgaatttgt 15450416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 468
Target Start/End: Complemental strand, 3018507 - 3018439
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3018507 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 3018439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 29077328 - 29077447
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||||||||||| |||||||| | |  |||  |||||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29077427  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  29077428 catcaaaaaggtccctccgt 29077447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 4641355 - 4641474
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||| |||||||| | || |||  |||||| |||||||||||||| |||||||||| ||| ||||||||||| |||||| ||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctc 4641454  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  4641455 catcaaaaaggtccctccgt 4641474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 29112300 - 29112419
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||| |||||||| | |  |||  |||||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29112399  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  29112400 catcaaaaaggtccctccgt 29112419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 393 - 470
Target Start/End: Original strand, 2968181 - 2968258
Alignment:
Q  393 caaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgt 470  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||    
T  2968181 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccatccgt 2968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 359 - 486
Target Start/End: Original strand, 20523374 - 20523501
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 458  Q
    |||||||||| |||| ||||||| |   |||| ||||||| |||| | |||| ||||||||||| | |||||||||||||||  ||||||||||||||||    
T  20523374 catcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaa 20523473  T
Q  459 aggtccctccgtacaaatgttctgttag 486  Q
     ||||||||||| |||| ||||||||||    
T  20523474 tggtccctccgtccaaaagttctgttag 20523501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 361 - 486
Target Start/End: Complemental strand, 32439205 - 32439080
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||| ||| ||||||||| |   |||| ||||||| |||||| |||| ||||||||||| | |||||||||||||||  |||||||||||||||| |    
T  32439205 tcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 32439106  T
Q  461 gtccctccgtacaaatgttctgttag 486  Q
    |||||||||| |||| | ||||||||    
T  32439105 gtccctccgtccaaaagatctgttag 32439080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 363 - 475
Target Start/End: Complemental strand, 13613694 - 13613582
Alignment:
Q  363 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggt 462  Q
    ||||||||||||||||||| |   |||| ||||||| |||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||   ||    
T  13613694 aaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagt 13613595  T
Q  463 ccctccgtacaaa 475  Q
    |||||||| ||||    
T  13613594 ccctccgtccaaa 13613582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 17950561 - 17950652
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| |||||||| ||| ||| |||||||||| || |||  ||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 17950652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Complemental strand, 7373072 - 7372958
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||  |||||||||||   || | ||||||| |||||| |||| ||||||||||  | |||||||||||||||  ||| |||||||||||| |    
T  7373072 tcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatg 7372973  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  7372972 gtccctccgtccaaa 7372958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 13610702 - 13610771
Alignment:
Q  363 aaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtcc 432  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||| ||||||||||||| |||||||    
T  13610702 aaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtcc 13610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 4646307 - 4646216
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| |||||||| ||  ||| |||||||||| |||||| | ||||| |||| |||||||||||||||||||| ||| ||||| |||||||    
T  4646307 gagtgaaccatcaacttaatccctgaatttttacggatcggttaaattcgtccatcaattatgcgaaatatcaatttaatccctaaatttgt 4646216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 486
Target Start/End: Original strand, 30891132 - 30891259
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 458  Q
    |||||| ||||| || |||||| || | |||| |||||||| ||| | |||||||| ||||||    ||||||||||||||||||||||||||| ||||     
T  30891132 catcaatttcgttctagaatttgtacgaatcggtcaaatttatccttaaattatgcaaaatatacgtttagtccctgaatttgtcagacgtccaacaaag 30891231  T
Q  459 aggtccctccgtacaaatgttctgttag 486  Q
      |||||||||| |||||| ||| ||||    
T  30891232 tagtccctccgtccaaatgctctattag 30891259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 35175987 - 35175882
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| |||||||||||||||| | ||||||  |||||| ||| |  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 35175888  T
Q  451 catcaa 456  Q
    ||||||    
T  35175887 catcaa 35175882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 475
Target Start/End: Original strand, 10568407 - 10568523
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 458  Q
    ||||||||||||||||||||||| |   |||  ||||||| |||| | ||||  |||||||||  | |||||||||||||||  |||||||| |||||||    
T  10568407 catcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaa 10568506  T
Q  459 aggtccctccgtacaaa 475  Q
      |||||||||| ||||    
T  10568507 tagtccctccgtccaaa 10568523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 3456797 - 3456872
Alignment:
Q  400 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||| ||||    
T  3456797 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 3456872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 486
Target Start/End: Original strand, 9398716 - 9398795
Alignment:
Q  407 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaatgttctgttag 486  Q
    |||| ||||||||||| | |||||||||||||||   |||||| |||||||| ||||||||||| |||| |||| |||||    
T  9398716 aattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttag 9398795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 456
Target Start/End: Complemental strand, 17952167 - 17952061
Alignment:
Q  350 tgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 449  Q
    |||||| |||||||| ||||||| |||||||| | || |||  |||||| |||||  ||||   |||||||||||  ||||||||||||||||  |||||    
T  17952167 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 17952068  T
Q  450 ccatcaa 456  Q
    |||||||    
T  17952067 ccatcaa 17952061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 477
Target Start/End: Original strand, 24662488 - 24662606
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 458  Q
    |||||| |||||||||||||||  | | ||   ||||||| ||||| |||||   |||||||||||  |||||| |||||||||||||||||||| ||||    
T  24662488 catcaacttcgtccttgaatttgcacgaatatgtcaaattcgtcccccaatttaacgaaatatcaaaatagtccatgaatttgtcagacgtccataaaaa 24662587  T
Q  459 aggtccctccgtacaaatg 477  Q
    | |||| |  |||||||||    
T  24662588 atgtccttatgtacaaatg 24662606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 475
Target Start/End: Complemental strand, 32455997 - 32455891
Alignment:
Q  369 gtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 468  Q
    ||||||||||||| |   |||| |||| || |||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||   ||||||||    
T  32455997 gtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtccatcaaatcagtccctcc 32455898  T
Q  469 gtacaaa 475  Q
    || ||||    
T  32455897 gtccaaa 32455891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 11357275 - 11357194
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||  ||||| ||| |||||||||||||||    
T  11357275 catcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 29114873 - 29114776
Alignment:
Q  345 atttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||||||||| |||||||| || |||| |||||||| | |  |||  |||||| |||| ||||||||||||||| |||| ||  |||||||||||||    
T  29114873 atttttgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaatttcatccctgaatttgt 29114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 31210516 - 31210440
Alignment:
Q  366 ttcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    ||||| ||||||||| || |||||| ||||| | |||||| ||||||||||||||| || | | |||||||||||||    
T  31210516 ttcgttcttgaatttgtaaggatcggtcaaaatcgtcccttaattatgcgaaatattaaataaatccctgaatttgt 31210440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 30639619 - 30639702
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||| ||||||| |||||||| | || |||  |||||| ||||||||||||||| ||||||||| ||| ||  |||||||||    
T  30639619 catcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatctatgaatttgt 30639702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 6899495 - 6899609
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||| ||||||||||||| |   |||  ||||||| ||| || |||| || |||||||| | ||||||||| |||||  ||||| |||||||||| |    
T  6899495 tcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatccatcaaaatg 6899594  T
Q  461 gtccctccgtacaaa 475  Q
    |||||| ||| ||||    
T  6899595 gtcccttcgtccaaa 6899609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 475
Target Start/End: Original strand, 7049835 - 7049881
Alignment:
Q  429 gtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    ||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  7049835 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 7049881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 11355232 - 11355346
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| ||||||| ||| || |||| |  |||||||| | | | |||||||||||  |||||| ||| ||||| |    
T  11355232 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggccaccaaaatg 11355331  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  11355332 gtccctccgtccaaa 11355346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 32516887 - 32517001
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   |||| ||||||| |||||| |||| | | ||||| | | |||| || |||||||  || |||||||||||||      
T  32516887 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtccatcaaaatt 32516986  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  32516987 gtccctccgtccaaa 32517001  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 475
Target Start/End: Complemental strand, 14338520 - 14338475
Alignment:
Q  430 tccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||||||||  |||||||||||||||| ||||||||||| ||||    
T  14338520 tccctgaatttcacagacgtccatcaaaatggtccctccgttcaaa 14338475  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 35174386 - 35174482
Alignment:
Q  346 tttttgagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 442  Q
    |||||||||| | |||||| ||||||| |||||||||| || |||  ||| || ||  ||||||||| ||||||||||| ||| |  ||||||||||    
T  35174386 tttttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtttctcaattatacgaaatatcaatttaatttctgaatttgt 35174482  T

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Target: scaffold0477 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 470
Target Start/End: Complemental strand, 6758 - 6639
Alignment:
Q  351 gagtggaccatcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 450  Q
    ||||| |||||||| || |||| |||||||| | || |||  |||||| |||||||||||||| |||||||||| ||| ||||||||||| |||||| ||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctc 6659  T
Q  451 catcaaaaaggtccctccgt 470  Q
    ||||||||||||||||||||    
T  6658 catcaaaaaggtccctccgt 6639  T

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Target: scaffold1041 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 374 - 456
Target Start/End: Original strand, 2121 - 2203
Alignment:
Q  374 tgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 456  Q
    |||||||||| | ||||| ||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  2121 tgaatttttacgcatcgaccaaattcatccctcaattatgcgaaatatcaacttaatccctaaatttgtcagacgtcaatcaa 2203  T

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Target: scaffold0058 (Bit Score: 51; Significance: 5e-20; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 3304 - 3418
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  ||| ||||||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||       
T  3304 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattc 3403  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  3404 gtccctccgtccaaa 3418  T

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Target: scaffold0058; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 4476 - 4590
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 460  Q
    ||||||||||||||||||||| |   ||||  ||| ||||||||| |||| ||||||||||||| |||||||||||||||  |||||||||||||||       
T  4476 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattc 4575  T
Q  461 gtccctccgtacaaa 475  Q
    |||||||||| ||||    
T  4576 gtccctccgtccaaa 4590  T

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Target: scaffold0058; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 14422 - 14343
Alignment:
Q  361 tcaaattcgtccttgaatttttatggatcgatcaaattt-gtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||| |   ||||  ||||||| |||||| |||| ||||||||||||| |||||||||||||||    
T  14422 tcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

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Target: scaffold1454 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 475
Target Start/End: Original strand, 1327 - 1387
Alignment:
Q  415 gaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtacaaa 475  Q
    |||||||| | |||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  1327 gaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 1387  T

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Target: scaffold0345 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 1636 - 1555
Alignment:
Q  359 catcaaattcgtccttgaatttttatggatcgatcaaatttgtccctcaattatgcgaaatatcaacttagtccctgaattt 440  Q
    ||||||||||||||||||||||| |   |||| ||||||| |||||| |||| ||  ||||| ||| |||||||||||||||    
T  1636 catcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

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