View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14368_low_9 (Length: 437)

Name: NF14368_low_9
Description: NF14368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14368_low_9
NF14368_low_9
[»] chr3 (79 HSPs)
chr3 (18-437)||(41825116-41825535)
chr3 (18-433)||(29611543-29611957)
chr3 (270-437)||(20945279-20945447)
chr3 (306-437)||(26517194-26517325)
chr3 (306-437)||(11388117-11388248)
chr3 (306-435)||(46048518-46048647)
chr3 (306-434)||(13084340-13084468)
chr3 (281-437)||(27047157-27047313)
chr3 (306-437)||(14645868-14645999)
chr3 (306-437)||(12077722-12077853)
chr3 (306-437)||(22659576-22659707)
chr3 (306-437)||(27638056-27638187)
chr3 (306-437)||(29676718-29676849)
chr3 (306-437)||(30476037-30476168)
chr3 (306-437)||(40645670-40645801)
chr3 (306-437)||(41308755-41308886)
chr3 (306-437)||(50363023-50363154)
chr3 (306-432)||(41727222-41727348)
chr3 (306-437)||(46435710-46435840)
chr3 (306-437)||(31819402-31819533)
chr3 (306-437)||(41543586-41543717)
chr3 (306-436)||(37729009-37729139)
chr3 (318-432)||(44083635-44083749)
chr3 (306-431)||(26121328-26121453)
chr3 (320-437)||(28477395-28477512)
chr3 (306-437)||(26043015-26043145)
chr3 (306-437)||(33287862-33287993)
chr3 (321-427)||(39617239-39617345)
chr3 (315-437)||(48309450-48309571)
chr3 (306-435)||(50524957-50525086)
chr3 (306-437)||(42010864-42010995)
chr3 (306-437)||(42891415-42891546)
chr3 (306-437)||(51263078-51263209)
chr3 (306-436)||(26998891-26999021)
chr3 (341-430)||(21932957-21933046)
chr3 (341-437)||(35055817-35055913)
chr3 (341-437)||(41739952-41740048)
chr3 (281-433)||(44338052-44338204)
chr3 (306-437)||(11344554-11344684)
chr3 (306-393)||(31531448-31531535)
chr3 (297-437)||(831339-831480)
chr3 (306-418)||(29645354-29645466)
chr3 (318-437)||(33411954-33412071)
chr3 (318-431)||(26243480-26243593)
chr3 (308-437)||(48903062-48903191)
chr3 (306-431)||(52325488-52325613)
chr3 (318-396)||(11140713-11140791)
chr3 (306-407)||(25750523-25750624)
chr3 (310-437)||(35765623-35765752)
chr3 (306-427)||(50092664-50092785)
chr3 (306-426)||(35145236-35145347)
chr3 (306-437)||(54425935-54426066)
chr3 (306-428)||(21864295-21864415)
chr3 (306-436)||(48581314-48581444)
chr3 (306-395)||(43187114-43187203)
chr3 (308-437)||(48901496-48901625)
chr3 (285-437)||(54555903-54556056)
chr3 (341-437)||(28229196-28229292)
chr3 (337-437)||(31474451-31474551)
chr3 (306-437)||(2421081-2421211)
chr3 (341-436)||(39931912-39932007)
chr3 (315-437)||(28228184-28228306)
chr3 (336-437)||(28243785-28243886)
chr3 (306-398)||(11393918-11394010)
chr3 (383-437)||(5504554-5504608)
chr3 (341-436)||(48213656-48213753)
chr3 (285-393)||(31650688-31650797)
chr3 (308-367)||(23157093-23157152)
chr3 (306-423)||(34055857-34055972)
chr3 (345-437)||(29349409-29349505)
chr3 (348-437)||(383644-383733)
chr3 (393-437)||(11396804-11396848)
chr3 (306-437)||(49000448-49000578)
chr3 (306-364)||(53717578-53717636)
chr3 (318-421)||(4979766-4979868)
chr3 (318-363)||(23068041-23068086)
chr3 (360-433)||(31826242-31826315)
chr3 (306-346)||(5504612-5504652)
chr3 (341-421)||(32848614-32848694)
[»] chr1 (87 HSPs)
chr1 (18-437)||(31807948-31808366)
chr1 (271-433)||(13723458-13723621)
chr1 (270-437)||(32152117-32152285)
chr1 (306-437)||(5085065-5085196)
chr1 (291-437)||(20564755-20564902)
chr1 (306-437)||(48721844-48721975)
chr1 (306-432)||(16582529-16582655)
chr1 (270-437)||(23982568-23982736)
chr1 (306-437)||(3143399-3143530)
chr1 (310-433)||(15911532-15911655)
chr1 (306-437)||(30336055-30336186)
chr1 (318-429)||(28723635-28723748)
chr1 (269-436)||(31305276-31305444)
chr1 (306-437)||(2342900-2343031)
chr1 (306-437)||(33231836-33231967)
chr1 (269-434)||(15179368-15179534)
chr1 (285-430)||(32144285-32144431)
chr1 (306-434)||(30898542-30898670)
chr1 (281-431)||(4813444-4813595)
chr1 (264-434)||(28948943-28949114)
chr1 (306-437)||(29140630-29140761)
chr1 (306-428)||(38680471-38680593)
chr1 (300-437)||(47643532-47643667)
chr1 (281-437)||(8984637-8984794)
chr1 (270-434)||(15512760-15512925)
chr1 (270-435)||(51390515-51390679)
chr1 (306-437)||(4817882-4818011)
chr1 (306-437)||(4829682-4829811)
chr1 (306-430)||(35365967-35366091)
chr1 (306-437)||(34696859-34696990)
chr1 (306-437)||(44395531-44395662)
chr1 (270-437)||(51996913-51997083)
chr1 (306-433)||(52141155-52141284)
chr1 (306-419)||(25269373-25269486)
chr1 (306-437)||(32047438-32047568)
chr1 (298-406)||(41737112-41737221)
chr1 (306-437)||(44335285-44335420)
chr1 (318-430)||(16395531-16395643)
chr1 (333-437)||(47070937-47071041)
chr1 (328-431)||(24415018-24415121)
chr1 (304-437)||(44652837-44652967)
chr1 (306-433)||(47754622-47754749)
chr1 (267-437)||(25258286-25258458)
chr1 (318-437)||(8877780-8877899)
chr1 (306-423)||(10842325-10842440)
chr1 (318-428)||(34102344-34102454)
chr1 (281-420)||(50692379-50692520)
chr1 (318-434)||(25063218-25063334)
chr1 (318-437)||(5321999-5322118)
chr1 (306-437)||(36084966-36085097)
chr1 (318-433)||(46591110-46591225)
chr1 (315-421)||(9675659-9675765)
chr1 (316-436)||(3143713-3143831)
chr1 (318-437)||(3072147-3072264)
chr1 (306-437)||(3831045-3831174)
chr1 (306-437)||(46495305-46495437)
chr1 (338-433)||(34331903-34331998)
chr1 (315-433)||(4081931-4082049)
chr1 (270-433)||(27531058-27531222)
chr1 (306-437)||(44163228-44163351)
chr1 (341-433)||(13145449-13145541)
chr1 (318-429)||(28679806-28679916)
chr1 (18-168)||(50537182-50537335)
chr1 (344-437)||(291611-291704)
chr1 (270-426)||(40261555-40261709)
chr1 (270-383)||(43189062-43189178)
chr1 (306-437)||(28334197-28334322)
chr1 (306-418)||(35001265-35001377)
chr1 (306-423)||(10160715-10160825)
chr1 (318-436)||(23393492-23393607)
chr1 (350-433)||(15457795-15457878)
chr1 (324-433)||(5852831-5852938)
chr1 (308-437)||(13352832-13352960)
chr1 (385-436)||(46732937-46732988)
chr1 (358-426)||(32715567-32715634)
chr1 (323-387)||(34012070-34012134)
chr1 (381-437)||(34012558-34012614)
chr1 (315-370)||(13698593-13698648)
chr1 (306-368)||(29302494-29302556)
chr1 (341-407)||(40205591-40205657)
chr1 (306-389)||(47133463-47133547)
chr1 (306-397)||(6282470-6282561)
chr1 (341-436)||(43414766-43414861)
chr1 (306-376)||(9684755-9684825)
chr1 (363-437)||(40612935-40613009)
chr1 (341-414)||(22786731-22786804)
chr1 (380-436)||(48573118-48573174)
[»] chr7 (65 HSPs)
chr7 (306-437)||(4089477-4089608)
chr7 (270-423)||(31373689-31373843)
chr7 (281-437)||(46783818-46783975)
chr7 (306-437)||(1324705-1324836)
chr7 (306-437)||(27213484-27213615)
chr7 (306-437)||(21809624-21809755)
chr7 (306-433)||(25750365-25750492)
chr7 (306-437)||(48610113-48610244)
chr7 (306-427)||(37673734-37673855)
chr7 (306-437)||(20123447-20123579)
chr7 (306-437)||(2276554-2276685)
chr7 (306-437)||(18122019-18122150)
chr7 (306-437)||(21388239-21388370)
chr7 (306-437)||(37048032-37048163)
chr7 (306-437)||(48193612-48193743)
chr7 (306-426)||(10685082-10685202)
chr7 (306-422)||(37491611-37491727)
chr7 (306-437)||(48767561-48767693)
chr7 (306-437)||(19236044-19236175)
chr7 (270-436)||(29636019-29636185)
chr7 (306-437)||(40263708-40263839)
chr7 (306-437)||(40740947-40741080)
chr7 (306-427)||(36116318-36116439)
chr7 (306-434)||(26632843-26632971)
chr7 (323-434)||(21392873-21392984)
chr7 (281-437)||(26200945-26201103)
chr7 (318-427)||(35128393-35128502)
chr7 (318-437)||(5334372-5334491)
chr7 (306-429)||(6376118-6376241)
chr7 (306-421)||(21801049-21801164)
chr7 (306-433)||(23876034-23876161)
chr7 (316-423)||(49100678-49100785)
chr7 (18-168)||(15827250-15827400)
chr7 (300-421)||(21752518-21752640)
chr7 (318-428)||(43465129-43465239)
chr7 (316-437)||(36726151-36726271)
chr7 (306-437)||(28663753-28663883)
chr7 (334-437)||(42983591-42983694)
chr7 (306-432)||(35960375-35960501)
chr7 (306-437)||(27162880-27163010)
chr7 (306-433)||(33181292-33181419)
chr7 (308-433)||(43601146-43601270)
chr7 (315-416)||(29992981-29993082)
chr7 (306-423)||(42993179-42993296)
chr7 (321-426)||(44648703-44648810)
chr7 (306-437)||(27170009-27170139)
chr7 (341-437)||(10408545-10408641)
chr7 (306-397)||(10595116-10595205)
chr7 (353-437)||(28038865-28038950)
chr7 (321-437)||(29723472-29723589)
chr7 (352-432)||(47458168-47458248)
chr7 (319-390)||(41672591-41672662)
chr7 (359-437)||(24700673-24700751)
chr7 (318-396)||(40211295-40211373)
chr7 (342-437)||(43026053-43026149)
chr7 (366-437)||(13907720-13907791)
chr7 (364-431)||(37136236-37136303)
chr7 (318-388)||(25828130-25828200)
chr7 (318-415)||(19477411-19477512)
chr7 (323-437)||(4068413-4068528)
chr7 (270-379)||(20124148-20124258)
chr7 (358-391)||(12645602-12645635)
chr7 (341-413)||(8444059-8444131)
chr7 (378-434)||(21759789-21759845)
chr7 (380-432)||(38729673-38729725)
[»] chr4 (85 HSPs)
chr4 (306-437)||(30153199-30153330)
chr4 (281-437)||(41920015-41920172)
chr4 (306-437)||(16070428-16070559)
chr4 (306-437)||(25477222-25477353)
chr4 (306-437)||(20262371-20262502)
chr4 (306-437)||(20291337-20291468)
chr4 (306-437)||(22750819-22750950)
chr4 (291-437)||(29584875-29585022)
chr4 (318-437)||(33246474-33246593)
chr4 (306-437)||(37625102-37625233)
chr4 (306-431)||(37175005-37175129)
chr4 (306-437)||(14602632-14602763)
chr4 (308-423)||(34543701-34543816)
chr4 (318-437)||(48472472-48472591)
chr4 (306-437)||(52198705-52198836)
chr4 (306-436)||(28116483-28116613)
chr4 (306-437)||(5448659-5448790)
chr4 (306-437)||(38136352-38136483)
chr4 (306-427)||(39237576-39237697)
chr4 (306-426)||(51787768-51787888)
chr4 (307-437)||(5416846-5416974)
chr4 (306-437)||(19654425-19654556)
chr4 (306-437)||(20185633-20185764)
chr4 (306-437)||(52226016-52226147)
chr4 (318-437)||(52552488-52552607)
chr4 (306-437)||(54438507-54438638)
chr4 (306-437)||(56373321-56373452)
chr4 (270-429)||(31486447-31486608)
chr4 (318-427)||(46729314-46729423)
chr4 (306-434)||(12624693-12624821)
chr4 (306-437)||(43509080-43509209)
chr4 (265-433)||(26203085-26203254)
chr4 (306-430)||(22651461-22651585)
chr4 (306-437)||(39414233-39414362)
chr4 (333-437)||(43800832-43800936)
chr4 (306-437)||(24072764-24072895)
chr4 (270-437)||(7002142-7002311)
chr4 (306-423)||(50782775-50782892)
chr4 (281-437)||(10602187-10602340)
chr4 (321-433)||(31937373-31937485)
chr4 (306-417)||(5536494-5536605)
chr4 (318-437)||(13096519-13096638)
chr4 (306-433)||(41945754-41945880)
chr4 (306-437)||(20293740-20293875)
chr4 (315-436)||(20791933-20792054)
chr4 (306-437)||(3684164-3684296)
chr4 (321-421)||(32236843-32236943)
chr4 (306-433)||(39197015-39197143)
chr4 (318-430)||(45628059-45628170)
chr4 (318-433)||(5932895-5933010)
chr4 (350-437)||(21171765-21171852)
chr4 (299-437)||(10541234-10541372)
chr4 (285-425)||(31840073-31840212)
chr4 (318-437)||(20116461-20116578)
chr4 (341-437)||(41459619-41459715)
chr4 (324-437)||(5167994-5168107)
chr4 (306-433)||(54701271-54701395)
chr4 (306-390)||(3094179-3094263)
chr4 (350-426)||(26186743-26186819)
chr4 (341-430)||(51918640-51918725)
chr4 (348-427)||(40411330-40411409)
chr4 (306-434)||(20016522-20016646)
chr4 (315-437)||(54359690-54359811)
chr4 (341-433)||(52768880-52768972)
chr4 (306-437)||(52977554-52977684)
chr4 (323-437)||(44812584-44812698)
chr4 (306-423)||(45079804-45079919)
chr4 (361-437)||(21121019-21121095)
chr4 (350-437)||(34643436-34643522)
chr4 (367-437)||(20540029-20540098)
chr4 (359-437)||(56217030-56217108)
chr4 (380-437)||(31917448-31917505)
chr4 (357-418)||(36513306-36513367)
chr4 (371-431)||(726666-726726)
chr4 (371-431)||(754118-754178)
chr4 (389-437)||(3113446-3113494)
chr4 (315-413)||(18683536-18683632)
chr4 (352-435)||(30866699-30866782)
chr4 (372-430)||(26170251-26170309)
chr4 (318-376)||(42169222-42169280)
chr4 (388-437)||(3094409-3094458)
chr4 (306-359)||(30049428-30049481)
chr4 (381-426)||(30049769-30049814)
chr4 (308-417)||(31294155-31294264)
chr4 (283-347)||(32866477-32866542)
[»] scaffold1091 (1 HSPs)
scaffold1091 (306-437)||(1890-2021)
[»] chr8 (74 HSPs)
chr8 (306-437)||(25198286-25198417)
chr8 (306-437)||(14577630-14577761)
chr8 (306-437)||(25185027-25185158)
chr8 (306-437)||(26878706-26878837)
chr8 (301-437)||(41086966-41087102)
chr8 (306-437)||(24512145-24512276)
chr8 (270-437)||(36437461-36437629)
chr8 (270-437)||(45203719-45203886)
chr8 (306-437)||(57166-57297)
chr8 (306-437)||(14846899-14847030)
chr8 (306-433)||(31746387-31746514)
chr8 (318-437)||(38761336-38761455)
chr8 (306-427)||(37956118-37956239)
chr8 (306-427)||(38770175-38770296)
chr8 (306-437)||(40517740-40517868)
chr8 (306-434)||(43980564-43980692)
chr8 (291-437)||(37141707-37141854)
chr8 (306-433)||(37600870-37600997)
chr8 (323-433)||(12762856-12762966)
chr8 (270-427)||(12998681-12998839)
chr8 (306-434)||(39543641-39543772)
chr8 (306-437)||(2562707-2562839)
chr8 (306-434)||(24962346-24962474)
chr8 (306-437)||(38773326-38773458)
chr8 (306-437)||(7172216-7172347)
chr8 (306-437)||(34882667-34882798)
chr8 (306-437)||(38202970-38203101)
chr8 (306-437)||(40790786-40790916)
chr8 (318-432)||(14739438-14739552)
chr8 (336-433)||(36309578-36309675)
chr8 (306-433)||(24276539-24276664)
chr8 (306-437)||(31673594-31673725)
chr8 (306-437)||(885459-885589)
chr8 (306-437)||(16002701-16002832)
chr8 (306-433)||(25888592-25888719)
chr8 (318-437)||(30262516-30262635)
chr8 (306-437)||(31252633-31252763)
chr8 (291-436)||(5191528-5191673)
chr8 (318-423)||(7772521-7772626)
chr8 (306-437)||(1177134-1177264)
chr8 (306-429)||(3113519-3113642)
chr8 (306-437)||(22590372-22590503)
chr8 (306-437)||(40337169-40337300)
chr8 (306-437)||(45185245-45185376)
chr8 (306-427)||(10396218-10396337)
chr8 (306-416)||(17933701-17933812)
chr8 (306-433)||(40602023-40602150)
chr8 (291-426)||(44255435-44255570)
chr8 (315-434)||(45183842-45183961)
chr8 (341-434)||(43191458-43191551)
chr8 (306-437)||(1769426-1769556)
chr8 (318-419)||(34869839-34869940)
chr8 (315-419)||(3006777-3006881)
chr8 (357-437)||(23399755-23399835)
chr8 (338-418)||(35794771-35794851)
chr8 (306-404)||(16644047-16644145)
chr8 (343-434)||(34157951-34158042)
chr8 (306-376)||(14522643-14522713)
chr8 (306-391)||(14906598-14906683)
chr8 (357-437)||(23280699-23280779)
chr8 (331-437)||(35709077-35709183)
chr8 (310-418)||(41541550-41541656)
chr8 (281-370)||(45283827-45283916)
chr8 (341-437)||(12894182-12894278)
chr8 (389-437)||(40807989-40808037)
chr8 (381-437)||(33385318-33385374)
chr8 (372-433)||(45283468-45283528)
chr8 (376-436)||(10709381-10709441)
chr8 (401-437)||(41371782-41371818)
chr8 (315-434)||(27571-27690)
chr8 (341-376)||(27194062-27194097)
chr8 (306-368)||(4273955-4274017)
chr8 (357-437)||(2031264-2031344)
chr8 (401-437)||(7727327-7727363)
[»] scaffold0012 (1 HSPs)
scaffold0012 (291-437)||(99794-99941)
[»] chr6 (44 HSPs)
chr6 (306-437)||(1763810-1763941)
chr6 (306-437)||(31945890-31946021)
chr6 (306-437)||(30465946-30466077)
chr6 (318-432)||(12514568-12514682)
chr6 (306-430)||(16327120-16327244)
chr6 (306-437)||(15981791-15981922)
chr6 (306-437)||(31536009-31536140)
chr6 (318-436)||(34513197-34513315)
chr6 (306-430)||(16350518-16350642)
chr6 (270-437)||(3887920-3888088)
chr6 (270-434)||(19838891-19839056)
chr6 (306-434)||(9461290-9461418)
chr6 (306-437)||(11302852-11302983)
chr6 (307-437)||(28238291-28238422)
chr6 (306-437)||(22410820-22410952)
chr6 (306-437)||(5895728-5895859)
chr6 (315-430)||(20522978-20523093)
chr6 (341-437)||(33607387-33607483)
chr6 (270-427)||(6791338-6791494)
chr6 (306-404)||(3729386-3729484)
chr6 (306-421)||(9428164-9428279)
chr6 (323-421)||(10669268-10669366)
chr6 (281-437)||(31780095-31780253)
chr6 (308-437)||(197429-197558)
chr6 (341-430)||(12514740-12514829)
chr6 (306-423)||(5084530-5084650)
chr6 (306-437)||(16186570-16186698)
chr6 (372-433)||(12503595-12503656)
chr6 (341-430)||(31152973-31153062)
chr6 (306-370)||(4250703-4250767)
chr6 (324-407)||(1514236-1514319)
chr6 (308-391)||(30248563-30248645)
chr6 (354-437)||(31039191-31039274)
chr6 (306-387)||(11081893-11081974)
chr6 (368-428)||(31487051-31487111)
chr6 (372-433)||(3729485-3729546)
chr6 (393-437)||(30248946-30248990)
chr6 (390-437)||(11082152-11082199)
chr6 (348-437)||(7365526-7365615)
chr6 (318-437)||(9941031-9941150)
chr6 (363-429)||(6418956-6419022)
chr6 (360-437)||(5457238-5457315)
chr6 (306-437)||(8644773-8644905)
chr6 (297-369)||(31487407-31487480)
[»] chr5 (67 HSPs)
chr5 (270-437)||(15898439-15898606)
chr5 (306-437)||(43060487-43060617)
chr5 (297-437)||(3559003-3559143)
chr5 (306-437)||(29866186-29866317)
chr5 (306-437)||(34877663-34877794)
chr5 (306-437)||(25017650-25017781)
chr5 (306-436)||(35568982-35569112)
chr5 (306-426)||(36177289-36177409)
chr5 (270-437)||(38972103-38972270)
chr5 (318-437)||(10523250-10523369)
chr5 (306-433)||(10934003-10934130)
chr5 (306-437)||(27587835-27587966)
chr5 (306-437)||(30348053-30348184)
chr5 (264-434)||(39690465-39690636)
chr5 (306-436)||(20946084-20946214)
chr5 (306-434)||(27642499-27642627)
chr5 (306-430)||(27798153-27798277)
chr5 (306-437)||(3247250-3247381)
chr5 (306-437)||(4738627-4738758)
chr5 (270-434)||(21912081-21912245)
chr5 (306-437)||(5845173-5845304)
chr5 (306-437)||(4857470-4857605)
chr5 (270-437)||(16091-16258)
chr5 (318-437)||(11980725-11980844)
chr5 (306-437)||(16496434-16496564)
chr5 (306-437)||(21574857-21574987)
chr5 (306-433)||(36347581-36347708)
chr5 (315-437)||(43453988-43454110)
chr5 (320-437)||(12895185-12895302)
chr5 (315-433)||(600771-600889)
chr5 (291-430)||(4745107-4745248)
chr5 (350-437)||(9375615-9375702)
chr5 (306-437)||(40979188-40979319)
chr5 (318-437)||(41521197-41521316)
chr5 (346-436)||(5151177-5151267)
chr5 (335-437)||(19281468-19281569)
chr5 (281-437)||(42644454-42644611)
chr5 (353-437)||(30317793-30317877)
chr5 (306-437)||(9946334-9946465)
chr5 (306-437)||(14044474-14044605)
chr5 (306-421)||(18729585-18729704)
chr5 (306-437)||(10656589-10656718)
chr5 (284-437)||(36750752-36750904)
chr5 (308-437)||(25690662-25690794)
chr5 (298-397)||(31642485-31642584)
chr5 (352-430)||(731935-732014)
chr5 (306-377)||(15967148-15967219)
chr5 (359-437)||(34676171-34676249)
chr5 (306-415)||(3631118-3631225)
chr5 (370-437)||(7736041-7736108)
chr5 (366-437)||(32401430-32401501)
chr5 (323-376)||(129624-129677)
chr5 (306-387)||(32067825-32067906)
chr5 (346-430)||(5764206-5764290)
chr5 (306-430)||(33583810-33583934)
chr5 (306-373)||(7510603-7510670)
chr5 (306-433)||(16969371-16969498)
chr5 (318-429)||(457780-457893)
chr5 (371-429)||(8717943-8718001)
chr5 (335-436)||(24781245-24781346)
chr5 (353-418)||(19089016-19089081)
chr5 (362-426)||(556054-556118)
chr5 (341-376)||(29874210-29874245)
chr5 (306-376)||(33862852-33862923)
chr5 (306-376)||(32402094-32402164)
chr5 (393-437)||(32068070-32068115)
chr5 (306-350)||(20976353-20976397)
[»] chr2 (85 HSPs)
chr2 (306-437)||(8065049-8065180)
chr2 (306-436)||(24774862-24774992)
chr2 (306-437)||(9718149-9718280)
chr2 (306-437)||(27297574-27297705)
chr2 (306-437)||(44424592-44424723)
chr2 (306-437)||(2131754-2131885)
chr2 (306-437)||(41665707-41665838)
chr2 (306-427)||(37355033-37355154)
chr2 (306-430)||(28264935-28265059)
chr2 (270-437)||(45214685-45214853)
chr2 (306-437)||(11459150-11459281)
chr2 (296-437)||(21012839-21012981)
chr2 (270-434)||(17663584-17663749)
chr2 (270-437)||(247620-247788)
chr2 (305-437)||(2048807-2048937)
chr2 (270-433)||(41865676-41865839)
chr2 (306-437)||(17250938-17251069)
chr2 (306-437)||(35178770-35178901)
chr2 (323-437)||(375322-375436)
chr2 (335-437)||(3237749-3237851)
chr2 (306-437)||(3645320-3645451)
chr2 (306-437)||(15851528-15851659)
chr2 (306-437)||(34329999-34330130)
chr2 (306-437)||(40346058-40346189)
chr2 (329-437)||(7255621-7255729)
chr2 (306-434)||(20361980-20362107)
chr2 (341-437)||(38982046-38982144)
chr2 (306-436)||(44421446-44421576)
chr2 (323-432)||(14527637-14527746)
chr2 (270-437)||(43709878-43710047)
chr2 (306-426)||(26512068-26512188)
chr2 (306-437)||(28733822-28733951)
chr2 (318-437)||(25731163-25731282)
chr2 (306-437)||(43650031-43650162)
chr2 (294-437)||(13534399-13534533)
chr2 (315-437)||(14420683-14420804)
chr2 (306-437)||(1246389-1246521)
chr2 (317-421)||(11071676-11071780)
chr2 (306-437)||(31644419-31644550)
chr2 (306-425)||(38449703-38449822)
chr2 (310-437)||(2917078-2917201)
chr2 (331-437)||(23464705-23464811)
chr2 (291-436)||(28190579-28190725)
chr2 (308-418)||(45150732-45150842)
chr2 (306-437)||(42250856-42250984)
chr2 (286-393)||(4398545-4398653)
chr2 (306-437)||(7278590-7278721)
chr2 (306-433)||(35241689-35241816)
chr2 (306-396)||(44274685-44274775)
chr2 (341-434)||(2521280-2521373)
chr2 (323-430)||(6275551-6275658)
chr2 (322-437)||(16808800-16808915)
chr2 (322-437)||(16848081-16848196)
chr2 (280-424)||(8383964-8384106)
chr2 (341-437)||(4758058-4758154)
chr2 (318-437)||(3326733-3326852)
chr2 (310-437)||(32677476-32677603)
chr2 (306-376)||(27749509-27749579)
chr2 (315-404)||(4033587-4033676)
chr2 (323-426)||(29971285-29971387)
chr2 (367-433)||(12498249-12498314)
chr2 (341-434)||(8393240-8393333)
chr2 (341-434)||(36846787-36846880)
chr2 (341-434)||(44462561-44462654)
chr2 (306-406)||(6597853-6597952)
chr2 (359-423)||(43119360-43119424)
chr2 (306-437)||(13477010-13477141)
chr2 (306-395)||(8667635-8667725)
chr2 (306-432)||(36174774-36174900)
chr2 (342-415)||(43638820-43638893)
chr2 (270-374)||(34042096-34042200)
chr2 (341-436)||(15578059-15578154)
chr2 (306-356)||(2395799-2395849)
chr2 (350-415)||(12417617-12417682)
chr2 (350-415)||(12429677-12429742)
chr2 (361-437)||(6408681-6408757)
chr2 (318-370)||(20426950-20427002)
chr2 (348-411)||(31583634-31583697)
chr2 (333-423)||(35453726-35453814)
chr2 (306-404)||(3337683-3337781)
chr2 (358-433)||(24490730-24490807)
chr2 (393-437)||(534549-534593)
chr2 (355-437)||(11121259-11121340)
chr2 (318-426)||(12121891-12122002)
chr2 (380-436)||(30401526-30401582)
[»] scaffold0005 (1 HSPs)
scaffold0005 (306-437)||(214615-214746)
[»] scaffold0038 (1 HSPs)
scaffold0038 (307-437)||(38453-38584)
[»] scaffold0699 (1 HSPs)
scaffold0699 (308-433)||(7577-7701)
[»] scaffold0013 (2 HSPs)
scaffold0013 (285-437)||(49111-49265)
scaffold0013 (335-415)||(61281-61361)
[»] scaffold0182 (2 HSPs)
scaffold0182 (322-433)||(22073-22184)
scaffold0182 (315-412)||(18695-18792)
[»] scaffold0176 (1 HSPs)
scaffold0176 (306-391)||(19529-19612)
[»] scaffold0009 (1 HSPs)
scaffold0009 (380-437)||(25770-25826)
[»] scaffold0166 (1 HSPs)
scaffold0166 (335-436)||(23628-23729)
[»] scaffold0116 (1 HSPs)
scaffold0116 (353-437)||(5870-5954)


Alignment Details
Target: chr3 (Bit Score: 351; Significance: 0; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 18 - 437
Target Start/End: Complemental strand, 41825535 - 41825116
Alignment:
Q  18 accttctcataaaattttagctatgaaccccctaaattaatttctttgcaccgaatgatgaacccactcacatttgctattagtttaatggttctatgac 117  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41825535 accttctcataaaattttagctatgaaccctctgaattaatttctttgcaccgaatgatgaacccactcacatttgctattagttcaatggttctatgac 41825436  T
Q  118 attcttactctaatccattagcattcttaaaagctatgcagttcaatttcatttgcaattgacaatgaattgtagtgtcgtattgttatagatatattat 217  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||    
T  41825435 attcttactctaacccattagcattcttaaaagttatgcagttcaatttcatttgcagctgacaatgaattgtagtgtcgcattgttattgatatattat 41825336  T
Q  218 attccannnnnnnaatggtgtatcaaattaaataatggtaacattgataatttactcccaccatccctatatttaagcaccttttgcattttcacacttc 317  Q
    ||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41825335 attccatttttttaatggtgtatcaaattaaataatggtaacattgataatttactcccaccatccctatatttaagcaccttttgcattttcacacttc 41825236  T
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41825235 ttaagaaaagttgtcagtgtaattaatgtgtctattttatgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 41825136  T
Q  418 tcaagacaagttagtagtat 437  Q
    | ||||||||||||||||||    
T  41825135 ttaagacaagttagtagtat 41825116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 18 - 433
Target Start/End: Original strand, 29611543 - 29611957
Alignment:
Q  18 accttctcataaaattttagctatgaaccccctaaattaatttctttgcaccgaatgatgaacccactcacatttgctattagtttaatggttctatgac 117  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||    
T  29611543 accttctcataaaattttagctatgaacccc-tgaattaatttctttgcaccgaatgatgaacccactcacatttgctattagttcaatggttccctgac 29611641  T
Q  118 attcttactctaatccattagcattcttaaaagctatgcagttcaatttcatttgcaattgacaatgaattgtagtgtcgtattgttatagatatattat 217  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||    
T  29611642 attcttactctaacccattagcatttttaaaagctatgcacttcaatttcatttgcaattgccaatgaattgtagtgtcacattgttattgatatattat 29611741  T
Q  218 attccannnnnnnaatggtgtatcaaattaaataatggtaacattgataatttactcccaccatccctatatttaagcaccttttgcattttcacacttc 317  Q
    ||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  29611742 attccatttttttaatggtgtatcaaattaaataatggtaacattgataatttactcccaccatccctatatttaagcaccttttgcattttctcactta 29611841  T
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    || ||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29611842 ttgagaaatgttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 29611941  T
Q  418 tcaagacaagttagta 433  Q
    ||||||||||||||||    
T  29611942 tcaagacaagttagta 29611957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 270 - 437
Target Start/End: Complemental strand, 20945447 - 20945279
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    |||||||||| ||||||||| ||| |||||||| |||||| |||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  20945447 tactcccaccgtccctatatgtaaacaccttttacatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttatgtgttaatatt 20945348  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||| ||||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  20945347 acctaattatcctttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttagtagtat 20945279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 26517325 - 26517194
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| || ||| ||||||||||||| |||||||    
T  26517325 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttctgtgttaatattaccaaattgtcctttatttgtatgtgtattaaatttg 26517226  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||||||||||    
T  26517225 acttttcatatttcaagacaagttagtagtat 26517194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 11388117 - 11388248
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| ||||||| |||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||||    
T  11388117 ttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattttgcgtgttaatattaccaaattgtattttgtttgtatgtgtattaaatttg 11388216  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||||||||||    
T  11388217 acttttcatatttcaagataagttagtagtat 11388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 306 - 435
Target Start/End: Original strand, 46048518 - 46048647
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||| || ||||||||||||||||| |||||||    
T  46048518 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 46048617  T
Q  406 acatttcatatttcaagacaagttagtagt 435  Q
    || ||||||||||||||||||| |||||||    
T  46048618 acttttcatatttcaagacaagatagtagt 46048647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 13084468 - 13084340
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13084468 ttttcatatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttg 13084369  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    || ||||| |||| || ||||||||||||    
T  13084368 acttttcaaattttaacacaagttagtag 13084340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 27047313 - 27047157
Alignment:
Q  281 tccctatatttaagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatct 380  Q
    ||||| ||| |||||||| |||||||||||||| | ||||||||||| ||| |||| || |||||||||||||||||||||||||||||||||||| |||    
T  27047313 tccctgtatgtaagcaccctttgcattttcacattccttaagaaaagctgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtct 27047214  T
Q  381 tttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||| || ||||||||| ||| |||||| ||||||| ||| ||||||    
T  27047213 tttgtttgtatgtgcattaaatttgactttttatattttaagacaatttaatagtat 27047157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 14645999 - 14645868
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| |||||||    
T  14645999 ttttcacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaatttg 14645900  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||| |||||||||||||||||||||||    
T  14645899 atttttcaaatttcaagacaagttagtagtat 14645868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 12077853 - 12077722
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  12077853 ttttcaaatttcttaagaaaagttgtcagtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttg 12077754  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||| ||||| ||| |||||    
T  12077753 acttttcatatttcaaaacaagatagaagtat 12077722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 22659576 - 22659707
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||||||||| ||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  22659576 tttttacatttcttaagaaaagttgttagtataattaatgtatttattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaattta 22659675  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||| |||| ||||||||||    
T  22659676 acttttcatatttcaaaacaaattagtagtat 22659707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 27638187 - 27638056
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||| | ||||||| |||||| ||||||||||||||||||||||  ||||| || ||||||||||||||||| |||||||    
T  27638187 ttttcacatttcttaagaaaagttattagtgtaattaatgtctctattttgtgtgttaatattataaaattgtcctttgtttgtatgtgtattaaatttg 27638088  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||||||| |||| ||||    
T  27638087 acatttcatatttcaagacaagatagtggtat 27638056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 29676849 - 29676718
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||| |||||||    
T  29676849 ttttcatatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgtgttaatattacgaaattgtcttttatttgtatgtgtattaaatttg 29676750  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
     ||||||||||||||||||||| |||| ||||    
T  29676749 gcatttcatatttcaagacaagatagtggtat 29676718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 30476037 - 30476168
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||| ||| |||||||    
T  30476037 ttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtctattaaatttg 30476136  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| ||| |||||||||    
T  30476137 acttttcatatttcaagagaagatagtagtat 30476168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 40645670 - 40645801
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||    
T  40645670 ttttcacatttcttaagaaatgttgtctgtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaacttg 40645769  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
       |||||||||||||||||||||| ||||||    
T  40645770 gtttttcatatttcaagacaagttattagtat 40645801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 41308886 - 41308755
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||  ||||||| ||||||||| |||||||    
T  41308886 ttttcacatttcttaaaaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaatttattctttgtttatatgtgtattaaatttg 41308787  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
     | |||||||||||||||||||||||||||||    
T  41308786 gcttttcatatttcaagacaagttagtagtat 41308755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 50363023 - 50363154
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||||||||||| |||| ||||| |||| ||| |||||||||||||||| || ||||||||||||||||| |||||||    
T  50363023 ttttcacattttttaagaaaaattgtcagtgtaattaatatgtctgttttatgtattaatattaccaaattgtcatttgtttgtatgtgtattaaatttg 50363122  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||||||||||    
T  50363123 acttttcatatttcaagacaagttagtagtat 50363154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 306 - 432
Target Start/End: Complemental strand, 41727348 - 41727222
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||| ||||||||||||| |||||||    
T  41727348 ttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcctttatttgtatgtgtattaaatttg 41727249  T
Q  406 acatttcatatttcaagacaagttagt 432  Q
    || ||||||||||||||||||| ||||    
T  41727248 acttttcatatttcaagacaagatagt 41727222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 46435840 - 46435710
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||||||||  ||||| |||||||    
T  46435840 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgta--tgtattaaatttg 46435743  T
Q  406 acatttcatatttc-aagacaagttagtagtat 437  Q
    || ||||| ||||| ||||||||||||||||||    
T  46435742 acttttcaaatttcaaagacaagttagtagtat 46435710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 31819402 - 31819533
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||| || |||||| |||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  31819402 ttttcacatttcttaagaaaagttatcggtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 31819501  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||  |||||||||    
T  31819502 acttttcatatttcaagacaatatagtagtat 31819533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 41543717 - 41543586
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| |||||||||| |||||  |||||||||||||||||||| ||||||||  ||||| |||||| ||||||||||||| |||||||    
T  41543717 ttttcacatttcttaaaaaaagttgtctgtgtatttaatgtgtctattttgtgtgataatattataaaattgtcttttatttgtatgtgtattaaatttg 41543618  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||||||| |||| ||||    
T  41543617 acatttcatatttcaagacaagatagttgtat 41543586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 306 - 436
Target Start/End: Complemental strand, 37729139 - 37729009
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| | | ||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  37729139 ttttcacatttcttaagaaaaattgttaatataattaatgtgtctattttgtgtgttaatattatcatattatcttttgtttgtatgtgtattaaatttg 37729040  T
Q  406 acatttcatatttcaagacaagttagtagta 436  Q
    || | ||||||||||| | ||||||||||||    
T  37729039 acttctcatatttcaaaataagttagtagta 37729009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 44083635 - 44083749
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| |||| | ||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  44083635 ttaagaaaaattgttattgtaattaatgtatctattttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcatatt 44083734  T
Q  418 tcaagacaagttagt 432  Q
    |||||| ||||||||    
T  44083735 tcaagataagttagt 44083749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 306 - 431
Target Start/End: Original strand, 26121328 - 26121453
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||||||||||||||||| |||||||| | |||||||||||||||||| |||||| || ||||||||||||||||| ||| |||    
T  26121328 tttttacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaacttg 26121427  T
Q  406 acatttcatatttcaagacaagttag 431  Q
    || ||||||||||||||| |||||||    
T  26121428 acttttcatatttcaagataagttag 26121453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 320 - 437
Target Start/End: Original strand, 28477395 - 28477512
Alignment:
Q  320 aagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttc 419  Q
    ||||||||||||| ||| || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||  ||||||||||    
T  28477395 aagaaaagttgtcggtgcaattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttgactattcatatttc 28477494  T
Q  420 aagacaagttagtagtat 437  Q
    ||||||| ||||||||||    
T  28477495 aagacaaattagtagtat 28477512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 26043015 - 26043145
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| |||||||||||| |||||||||||| |||| ||||| |||||||||||||| |||||||||| || ||||||||||||||||| |||||||    
T  26043015 tttttacatttcttaagaaaaattgtcagtgtaattaatatgtctgttttgtgtgttaatgttaccaaattgtcctttgtttgtatgtgtattaaatttg 26043114  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| || ||||||||||    
T  26043115 acttttcatatttcaagataa-ttagtagtat 26043145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 33287862 - 33287993
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||   ||||||| |||| ||||||||||||||||||||||||  ||||| || ||||||||| ||||||| |||||||    
T  33287862 ttttcacatttcttaagaaaagtttgtagtgtaattaatttgtctattttgtgtgttaatattattaaattgtcctttgtttgtttgtgtattaaatttg 33287961  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| |||||||||||||||||||||||||    
T  33287962 actttttatatttcaagacaagttagtagtat 33287993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 321 - 427
Target Start/End: Complemental strand, 39617345 - 39617239
Alignment:
Q  321 agaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttca 420  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||| || ||||||||||||||||| ||||||||| ||||||||||||    
T  39617345 agaaaagttgtcagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttca 39617246  T
Q  421 agacaag 427  Q
    |||||||    
T  39617245 agacaag 39617239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 315 - 437
Target Start/End: Original strand, 48309450 - 48309571
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||||||||||||| |||| || || |||||||||||||| |||||||||||| |||||||| ||||||||||||||| | ||||||||| ||||||    
T  48309450 ttcttaagaaaagttgttagtgcaatta-tgtgtctattttgtatgttaatattacaaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 48309548  T
Q  415 atttcaagacaagttagtagtat 437  Q
    ||||||||| |||||||||||||    
T  48309549 atttcaagataagttagtagtat 48309571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 50525086 - 50524957
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||| | || | |||| |||| ||| ||||||||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  50525086 ttttcacatttcttaagaaaagctctcggggtaattaatatgtatattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttg 50524987  T
Q  406 acatttcatatttcaagacaagttagtagt 435  Q
    || ||| | |||||||||||||||||||||    
T  50524986 acttttgaaatttcaagacaagttagtagt 50524957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 42010864 - 42010995
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| | ||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||| | | |||||||    
T  42010864 ttttcacatttcttaagaaaatttgttaatgtaattaatgtgtctattttgtgtgttaatattatcaaattattctttgtttgtatgtatgttaaatttg 42010963  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| || |||| |||||    
T  42010964 acttttcatatttcaagataaattagcagtat 42010995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 42891415 - 42891546
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||| ||| |||| ||||| ||||||||||||||||||||||| | || ||||||||||||| ||| |||||||    
T  42891415 ttttcacatttcttaagaaaagttgttagtataattaatttgtctgttttgtgtgttaatattaccaaactgtcctttgtttgtatgtatattaaatttg 42891514  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| |||| ||||||||||||| ||||    
T  42891515 acttttcaaatttaaagacaagttagtggtat 42891546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 51263078 - 51263209
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| |||| |||| ||||||| |||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||||| |||||||    
T  51263078 ttttcacatttcttaaaaaaaattgttagtgtaattaatgtgtctgttttatgtgttagtattactaaattgtcctttgtttgtatgtgtattaaatttg 51263177  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||| |||| |||||||||||||    
T  51263178 acttttcatatttaaagataagttagtagtat 51263209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 306 - 436
Target Start/End: Original strand, 26998891 - 26999021
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||| | ||| |||||| |||||||||| |||||||||||| ||||| ||||||||||||| |||||| |||||||    
T  26998891 ttttcacatttcttaagaaaagttgtcattataattaatgtatctattttgtttgttaatattacgaaattgtcttttgtttgtacgtgtattaaatttg 26998990  T
Q  406 acatttcatatttcaagacaagttagtagta 436  Q
    |  |||||||||| |||| ||| ||||||||    
T  26998991 atttttcatattttaagagaagatagtagta 26999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 341 - 430
Target Start/End: Original strand, 21932957 - 21933046
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||||||||||||| ||||||    
T  21932957 taatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgacttttcatatttcaagataagtta 21933046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 35055817 - 35055913
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||| ||| ||||||||| |||||||||||||||    
T  35055817 taatgtgtctattttgtgtgttaatattaccaaattgtcatttgcttgtatgtgtattaaatttgactttttatatttcaatacaagttagtagtat 35055913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 41740048 - 41739952
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||  ||||||||||||||| ||||||| |||||    
T  41740048 taatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgaattttcatatttcaagataagttagcagtat 41739952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 281 - 433
Target Start/End: Original strand, 44338052 - 44338204
Alignment:
Q  281 tccctatatttaagcaccttttgc-attttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||||| ||| | |||||||  ||||||||| || |||||||||||||| ||||||  |||| |||||| ||| |||||||||||||||||||| ||    
T  44338052 tccctatatgtaaaccccttttgttattttcacattttttaagaaaagttgttagtgtagttaat-tgtctaatttttgtgttaatattaccaaattgtc 44338150  T
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
     ||||||| ||||||||| ||||||||| ||| ||||||||||| |||||||||    
T  44338151 ctttgtttctatgtgtattaaatttgactttttatatttcaagataagttagta 44338204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 11344554 - 11344684
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||| |  |||||| |||||||||||||||||||||||| ||||||||||||| | || ||||||||||||| |||||||    
T  11344554 ttttcacatttcttaagaaaagttattggtgtaattaatgtgtctattttgtgtgttaacattaccaaattat-tcttttttgtatgtgtattaaatttg 11344652  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||| ||||||||| |||||  ||||||||    
T  11344653 attttttatatttcaatacaaggcagtagtat 11344684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 393
Target Start/End: Complemental strand, 31531535 - 31531448
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgt 393  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| |||||| ||||||||||||||||    
T  31531535 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttgatattatcaaattgtcttttgtttgtatgt 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 437
Target Start/End: Complemental strand, 831480 - 831339
Alignment:
Q  297 ccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgt 395  Q
    ||||||||||||| || | ||||||||||||||||||| ||||| |||||||  | | ||| ||||||||||||||||||| || ||||||| |||||||    
T  831480 ccttttgcatttttcatatttcttaagaaaagttgtcaatgtaattaatgtgcatgtattgcgtgttaatattaccaaattgtcctttgtttatatgtgt 831381  T
Q  396 atcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||  ||||||||||||| | |||||| ||||||    
T  831380 attaaatttgatttttcatatttcaatataagttattagtat 831339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 418
Target Start/End: Original strand, 29645354 - 29645466
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||| ||||| ||||||| |||||| ||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  29645354 ttttcacatttattaagaaatgttgttagtgtaattaatgtatctgttttatgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttg 29645453  T
Q  406 acatttcatattt 418  Q
    || ||||||||||    
T  29645454 acttttcatattt 29645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 33412071 - 33411954
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| |||| |||| || |||||||||||||||||||||||||||||||||||| | |||| ||||||  ||||| ||||||| | |||||||||    
T  33412071 ttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttttttctttgta--tgtattaaatttgtcttttcatatt 33411974  T
Q  418 tcaagacaagttagtagtat 437  Q
    ||||  ||||||||||||||    
T  33411973 tcaatgcaagttagtagtat 33411954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 431
Target Start/End: Original strand, 26243480 - 26243593
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||| ||| ||||||||||||| |||| ||| | |||||||||||||| |||  ||||| || ||||||||||||||||| ||||||||| |||||||||    
T  26243480 ttaaaaaaggttgtcagtgtaattaatatgtttgttttgtgtgttaatgttattaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatt 26243579  T
Q  418 tcaagacaagttag 431  Q
    |||||| |||||||    
T  26243580 tcaagataagttag 26243593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 437
Target Start/End: Complemental strand, 48903191 - 48903062
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||| || ||||||||| | || |||| || |||| ||||||||||||||||||||||||| ||||| || ||||||||||| | ||| |||||||||    
T  48903191 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgac 48903092  T
Q  408 atttcatatttcaagacaagttagtagtat 437  Q
     ||| ||||||||||| || ||||||||||    
T  48903091 ttttaatatttcaagaaaaattagtagtat 48903062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 431
Target Start/End: Complemental strand, 52325613 - 52325488
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||  ||| ||||||| ||||||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||| | ||||     
T  52325613 ttttcacatttcttaagaaaaaatgttagtgtaattaatgtgtctattttatgtgttaatattatcaaattgtcctttgtttatatgtttattacatttt 52325514  T
Q  406 acatttcatatttcaagacaagttag 431  Q
    |  ||||||||||||||| |||||||    
T  52325513 atttttcatatttcaagataagttag 52325488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 11140713 - 11140791
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgta 396  Q
    |||||||||||| ||||||||| |||||||| | |||||||||||| ||||||||||||||| ||||||||||||||||    
T  11140713 ttaagaaaagttatcagtgtaaataatgtgtatgttttgtgtgttagtattaccaaattatcctttgtttgtatgtgta 11140791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 306 - 407
Target Start/End: Original strand, 25750523 - 25750624
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||| ||||| | ||||| |||| |||||||||||||||||||||||||||| || |  ||||||||||||||||| |||||||    
T  25750523 tttttacatttcttaagaaaggttgttaatgtaattaatttgtctattttgtgtgttaatattaccaacttgttctttgtttgtatgtgtattaaatttg 25750622  T
Q  406 ac 407  Q
    ||    
T  25750623 ac 25750624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 35765752 - 35765623
Alignment:
Q  310 cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatt-atcttttgtttgt-atgtgtatcaaatttgac 407  Q
    |||| ||||||||||||||| ||||||||| |||| ||||| |||||||| |||||||||||||||| | ||| | | | | |||||||| |||||||||    
T  35765752 cacatttcttaagaaaagttatcagtgtaattaatatgtctgttttgtgtattaatattaccaaattgaccttgtttatatcatgtgtattaaatttgac 35765653  T
Q  408 atttcatatttcaagacaagttagtagtat 437  Q
     ||||| ||||||| |||||||||||||||    
T  35765652 ttttcaaatttcaaaacaagttagtagtat 35765623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 306 - 427
Target Start/End: Original strand, 50092664 - 50092785
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||| |||||||| |||||||| ||||||||   |||||||| |||||||||| ||||| || ||| ||||||||||||| ||| |||    
T  50092664 tttttacatttcttaacaaaagttgacagtgtaattaatgtgttggttttgtgtattaatattacaaaattgtcctttatttgtatgtgtattaaaattg 50092763  T
Q  406 acatttcatatttcaagacaag 427  Q
     | |||||||||||||||||||    
T  50092764 tcttttcatatttcaagacaag 50092785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 426
Target Start/End: Original strand, 35145236 - 35145347
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| ||| ||||||         ||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  35145236 ttttcacatttcttaagaaaagttgtgagtgtaattaacgtgtct---------gttaatattacgaaattatcctttgtttgtatttgtattaaatttg 35145326  T
Q  406 acatttcatatttcaagacaa 426  Q
    || ||||||||||||||||||    
T  35145327 acttttcatatttcaagacaa 35145347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 54426066 - 54425935
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||  | ||| ||||  | |||||||| ||||||||||||||||||||||||| || ||||||| ||||||||| ||||||     
T  54426066 ttttcacatttcttaagaaaaaatatcaatgtagttgatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttatatgtgtattaaattta 54425967  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||| ||| |  |||||||||||    
T  54425966 atttttcatattttaagtctggttagtagtat 54425935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 428
Target Start/End: Original strand, 21864295 - 21864415
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||| ||||||| ||| ||||| || || |||||||||||| |||| ||||||||||||||| |||||| ||||||||| ||| |||||||    
T  21864295 ttttcacatttctcaagaaaaattgacagtgcaatta-tgtgtctattttatgtgctaatattaccaaattgtctttt-tttgtatgtatattaaatttg 21864392  T
Q  406 acatttcatatttcaagacaagt 428  Q
    |  ||||||||||||||| ||||    
T  21864393 aattttcatatttcaagataagt 21864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 436
Target Start/End: Original strand, 48581314 - 48581444
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||| |   ||||  |||||||| |||||||||| ||||||||| |||| |||| ||| ||| ||||||||| |||||||    
T  48581314 ttttcacatttcttaaaaaaagttattgatgtagttaatgtgtttattttgtgtattaatattaacaaactatcctttatttttatgtgtattaaatttg 48581413  T
Q  406 acatttcatatttcaagacaagttagtagta 436  Q
    |  ||||||||||| |||||||||| |||||    
T  48581414 atttttcatatttccagacaagttaatagta 48581444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 43187203 - 43187114
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgt 395  Q
    |||||| | ||||||| ||||||||||| ||||| |||||||||| |||||||| |||||||||| ||||| || |||||||||||||||    
T  43187203 ttttcatatttcttaaaaaaagttgtcaatgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttgtttgtatgtgt 43187114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 437
Target Start/End: Complemental strand, 48901625 - 48901496
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||| || ||||||||| | || |||| || |||| ||||||||||||||||||||||||| ||||| || ||||||||||| | ||| |||||||||    
T  48901625 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgac 48901526  T
Q  408 atttcatatttcaagacaagttagtagtat 437  Q
     ||| |||||| |||| || ||| ||||||    
T  48901525 ttttaatattttaagaaaaattaatagtat 48901496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 437
Target Start/End: Complemental strand, 54556056 - 54555903
Alignment:
Q  285 tatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatctttt 383  Q
    |||||||||||| | ||| |||||| || | ||||||| ||| | ||| ||||||| |||| |||||||||| | ||||||| ||||||||||||| |||    
T  54556056 tatatttaagcaacctttacatttttcatatttcttaataaatgctgttagtgtaattaatatgtctattttatatgttaattttaccaaattatcattt 54555957  T
Q  384 gtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||| ||||| ||| || ||| || ||||||| || ||||||| ||||||||||    
T  54555956 gtttatatgtatattaattttaacttttcatactttaagacaaattagtagtat 54555903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 28229196 - 28229292
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||| | |||||| ||| |||||||||||||||| || ||| ||||||||| ||| ||||||||| ||| |||||| ||||||||||||||||||    
T  28229196 taatgtatatattttatgtattaatattaccaaattgtcctttatttgtatgtatattaaatttgacttttaatattttaagacaagttagtagtat 28229292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 337 - 437
Target Start/End: Original strand, 31474451 - 31474551
Alignment:
Q  337 taactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    |||||||||||||| ||||||| ||||||||||  |||||||| ||||||||||||||||| ||||||    ||||| |||| ||||||| |||||||||    
T  31474451 taactaatgtgtctgttttgtgcgttaatattattaaattatcatttgtttgtatgtgtattaaatttagtttttcaaattttaagacaaattagtagta 31474550  T
Q  437 t 437  Q
    |    
T  31474551 t 31474551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 2421081 - 2421211
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||| | |  || |||| | ||||| || |||||||||||||| ||||| || ||||||||||||| ||| |||||||    
T  2421081 ttttcacatttcttaaaaaaagttgttaatacaattaattt-tctatcttatgtgttaatattacaaaattgtcatttgtttgtatgtatattaaatttg 2421179  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| |||||  ||||||||||||||||||    
T  2421180 actttttatattcaaagacaagttagtagtat 2421211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 39931912 - 39932007
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    |||||||| |||||||||||||||  |||  ||||| || ||||||||||||||||| |||||| |  |||||||||| |||||||||||||||||    
T  39931912 taatgtgtatattttgtgtgttaaggttattaaattgtcatttgtttgtatgtgtattaaattttagttttcatattttaagacaagttagtagta 39932007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 437
Target Start/End: Original strand, 28228184 - 28228306
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||| ||||||||| |||| || ||||||||    |||||||||| |||||| ||||   || ||||||||||||||||| |||| |||| ||||||    
T  28228184 ttcttaaaaaaagttgttagtgcaattaatgtgttgtgtttgtgtgttcatattatcaaaacgtcatttgtttgtatgtgtattaaatgtgacttttcat 28228283  T
Q  415 atttcaagacaagttagtagtat 437  Q
     ||||||||||| ||||||||||    
T  28228284 ttttcaagacaaattagtagtat 28228306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 437
Target Start/End: Original strand, 28243785 - 28243886
Alignment:
Q  336 gtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagt 435  Q
    |||| |||||||| |||||||||||||||||| | |||||| || ||||||| | ||||||| |||||| || ||| ||||||||| | |||||||||||    
T  28243785 gtaattaatgtgtttattttgtgtgttaatataatcaaattgtcctttgtttatgtgtgtattaaatttaactttttatatttcaatataagttagtagt 28243884  T
Q  436 at 437  Q
    ||    
T  28243885 at 28243886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 11393918 - 11394010
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatc 398  Q
    |||||||| || |||| ||||||||| ||||||| |||||||||||||||||||||||||| || |||||| || ||| ||| ||||| ||||    
T  11393918 ttttcacattttttaaaaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatactatcaaattgtcatttatttatatgtatatc 11394010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 5504608 - 5504554
Alignment:
Q  383 tgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  5504608 tgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagtat 5504554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 48213656 - 48213753
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttc--atatttcaagacaagttagtagta 436  Q
    |||||||| ||||||||||||||||||||||  |||||| ||| ||||||||||||| || |||||  | ||  ||||||||||| ||||||||||||    
T  48213656 taatgtgtttattttgtgtgttaatattaccttattatcatttatttgtatgtgtattaattttgatttctcttatatttcaagataagttagtagta 48213753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 31650797 - 31650688
Alignment:
Q  285 tatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatctttt 383  Q
    ||||| |||||||| |||||||||| |||| || |||| |||| |||| | || || ||||||||||||||| |||| ||||||||||||||| || |||    
T  31650797 tatatgtaagcaccctttgcatttttcacatttattaaaaaaaattgttaatgcaattaatgtgtctattttatgtggtaatattaccaaattgtcattt 31650698  T
Q  384 gtttgtatgt 393  Q
     |||||||||    
T  31650697 atttgtatgt 31650688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 367
Target Start/End: Original strand, 23157093 - 23157152
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat 367  Q
    |||||| |||||||||||| |||||||||||| |||||||||| ||||||| ||||||||    
T  23157093 ttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgtgagttaatat 23157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 423
Target Start/End: Complemental strand, 34055972 - 34055857
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| |||| |||||| ||||| |||| ||||| ||||||||||||||||||  ||||| || ||  ||| ||||| ||| || ||||    
T  34055972 ttttcacatttcttaaaaaaaattgtcaatgtaattaatatgtctgttttgtgtgttaatattatgaaattgtcatt--tttttatgtatattaactttg 34055875  T
Q  406 acatttcatatttcaaga 423  Q
    || |||| ||||||||||    
T  34055874 acttttcgtatttcaaga 34055857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 437
Target Start/End: Original strand, 29349409 - 29349505
Alignment:
Q  345 gtgtctattttgtgtgttaatattac---caaattatcttttgtttgta-tgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||| ||||||| |||||||||||   |||||| |  |||| ||||| | ||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29349409 gtgtctgttttgtgcgttaatattactaccaaattgttatttgattgtactatgtataaaatttgacttttcatatttcaagataagttagtagtat 29349505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 437
Target Start/End: Original strand, 383644 - 383733
Alignment:
Q  348 tctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||| ||||||||| ||| |||| |||||||| ||||||| |||||||||  ||||| || ||||| |||  || |||||||||||||||    
T  383644 tctagtttgtgtgtgaattttactaaattatcatttgtttatatgtgtatttaatttaacttttcacattctaatacaagttagtagtat 383733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 11396804 - 11396848
Alignment:
Q  393 tgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||    
T  11396804 tgtattaaatttgacttttcatatttcaagataagttagtagtat 11396848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 49000448 - 49000578
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||||||||   || || |||||||||||||||||||  | |||||| |||| | || | ||||| ||||||||| ||||||     
T  49000448 ttttcacattttttaagaaaagttgttgatgcaattaatgtgtctattttgtgtaat-atattatcaaagtgtcctctgtttttatgtgtattaaattta 49000546  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||| |||||| |||| |||||| ||||||    
T  49000547 attttttatattttaagataagttaatagtat 49000578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 53717636 - 53717578
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaa 364  Q
    |||| ||| |||||||||||  |||||| ||||| |||||||||| |||||||||||||    
T  53717636 tttttacatttcttaagaaatattgtcaatgtaattaatgtgtctgttttgtgtgttaa 53717578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 4979868 - 4979766
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgt-gtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatat 416  Q
    ||||||||||| || |||| || |||||| |||||||| | ||||||||||||||||| | |  ||||||  ||| ||||| ||||||||| ||| ||||    
T  4979868 ttaagaaaagtagttagtgcaattaatgtttctatttttttgtgttaatattaccaaaatttaatttgtt--tatatgtataaaatttgactttttatat 4979771  T
Q  417 ttcaa 421  Q
    |||||    
T  4979770 ttcaa 4979766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 23068041 - 23068086
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgtta 363  Q
    ||||||||| |||| | ||||| |||||||||||||||||||||||    
T  23068041 ttaagaaaaattgttattgtaattaatgtgtctattttgtgtgtta 23068086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 433
Target Start/End: Original strand, 31826242 - 31826315
Alignment:
Q  360 gttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||||||||| | |||| |  ||||||||||||||||| ||||||||  ||  ||||| |||||||||||||||    
T  31826242 gttaatattatctaattgttctttgtttgtatgtgtattaaatttgattttgtatattgcaagacaagttagta 31826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 5504652 - 5504612
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgt 346  Q
    |||||||| ||||||||||| ||||||||||||| ||||||    
T  5504652 ttttcacatttcttaagaaatgttgtcagtgtaattaatgt 5504612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 32848614 - 32848694
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaa 421  Q
    |||||||| || ||||| ||| ||| |||| ||||| ||||||||||| |||| |||  |||||||  |||||||||||||    
T  32848614 taatgtgtttaatttgtatgtgaattttactaaattgtcttttgtttgcatgtctatttaatttgaattttcatatttcaa 32848694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 326; Significance: 0; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 18 - 437
Target Start/End: Complemental strand, 31808366 - 31807948
Alignment:
Q  18 accttctcataaaattttagctatgaaccccctaaattaatttctttgcaccgaatgatgaacccactcacatttgctattagtttaatggttctatgac 117  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  31808366 accttctaataaaattttagctatgaaccctctgaattaatttctttgcaccgaatgatgaacccactcacatttactattagttcaatggttccatgac 31808267  T
Q  118 attcttactctaatccattagcattcttaaaagctatgcagttcaatttcatttgcaattgacaatgaattgtagtgtcgtattgttatagatatattat 217  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  31808266 attcttactctaacctattagcattcttaaaagctatgcaattcaatttcatttgcaattgccaatgaattgtagtgtcgcattgttattgatatattat 31808167  T
Q  218 attccannnnnnnaatggtgtatcaaattaaataatggtaacattgataatttactcccaccatccctatatttaagcaccttttgcattttcacacttc 317  Q
    ||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31808166 attccatttttt-aatggtgtatcaaattaaataatggtaacattgataatttactcccaccatccctatatttaagcaccttttgcattttcacacttc 31808068  T
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    || ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  31808067 ttgagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgcatgtgtatcaaatttgacatttcctatt 31807968  T
Q  418 tcaagacaagttagtagtat 437  Q
    ||||||||||||||||||||    
T  31807967 tcaagacaagttagtagtat 31807948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 271 - 433
Target Start/End: Complemental strand, 13723621 - 13723458
Alignment:
Q  271 actcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatta 369  Q
    |||||| ||||| || ||| |||||||| |||||||||| |||| ||||||||||||||||| |||| || ||||||||||||||||||| |||||||||    
T  13723621 actccctccatctctttatgtaagcaccctttgcatttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtattaatatta 13723522  T
Q  370 ccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  13723521 ccaaattatcctttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagta 13723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 270 - 437
Target Start/End: Original strand, 32152117 - 32152285
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||| ||||| |||||||||||| |||||| |||| |||||||||||||||||  ||| || ||||||||||||||||||||||||||||    
T  32152117 tactccctccgtccttatatctaagcaccttttacatttttcacatttcttaagaaaagttgttggtgcaattaatgtgtctattttgtgtgttaatatt 32152216  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| |  ||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||    
T  32152217 accaaattgttatttgtttgtatgtgtattaaatttgacttttcatattttaagataagttagtagtat 32152285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 5085196 - 5085065
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  5085196 ttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcttttgtttgtatgtgtattaaatttg 5085097  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| ||| |||||||||    
T  5085096 acttttcatatttcaagagaagatagtagtat 5085065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 20564755 - 20564902
Alignment:
Q  291 taagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgt 389  Q
    |||||| |||||||||||| |||| || |||||||||||||  ||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||     
T  20564755 taagcatcttttgcatttttcacatttgttaagaaaagttgatagtgtaactaatgtgtctactttatgtgttaatattacaaaattgtcttttgtttga 20564854  T
Q  390 atgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  20564855 atgtgtattaaatttgacttttcatatttcaagacaagttagtagtat 20564902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 48721975 - 48721844
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  48721975 ttttcacatttcttaagaaaagctgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 48721876  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||||||||    
T  48721875 acttttcatatttcaagacaagatagtagtat 48721844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 306 - 432
Target Start/End: Original strand, 16582529 - 16582655
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||    
T  16582529 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcttttatttgtatgtgtattaaatttg 16582628  T
Q  406 acatttcatatttcaagacaagttagt 432  Q
    || ||||||||||||||||||| ||||    
T  16582629 acttttcatatttcaagacaagatagt 16582655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 270 - 437
Target Start/End: Complemental strand, 23982736 - 23982568
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||||||| ||||  || |||||||||| |||| ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  23982736 tactccctccgtccctatatgtaagtcccctttgcatttttcacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatatt 23982637  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    | ||||||  | ||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||    
T  23982636 atcaaattgacatttgtttgtatatgtattaaatttgacttttcatatttcaagataagttagtagtat 23982568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 3143399 - 3143530
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||| ||||| |||||||||| ||||||||| |||||||    
T  3143399 ttttcacatttcttaagaaaagttgtcattgtaattaatgtgtctgctttgtgtgttaatattacaaaattgtcttttgtttttatgtgtattaaatttg 3143498  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||||||||    
T  3143499 acttttcatatttcaagacaagatagtagtat 3143530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 310 - 433
Target Start/End: Complemental strand, 15911655 - 15911532
Alignment:
Q  310 cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacat 409  Q
    |||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| |||| ||||||    
T  15911655 cacatttcttaagaaaagttgttagtgtacttaatgtgtctattttgtgtgttaatattaccaaataaccatttgtttgtatgtgtattaaatgtgacat 15911556  T
Q  410 ttcatatttcaagacaagttagta 433  Q
    ||||||||||||||||||||||||    
T  15911555 ttcatatttcaagacaagttagta 15911532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 30336055 - 30336186
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||| |||| |||| |||||||    
T  30336055 ttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttctatgcgtataaaatttg 30336154  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||||||||||||| |||||||||||||    
T  30336155 aattttcatatttcaagataagttagtagtat 30336186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 318 - 429
Target Start/End: Complemental strand, 28723748 - 28723635
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttc--ata 415  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||    
T  28723748 ttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttcatata 28723649  T
Q  416 tttcaagacaagtt 429  Q
    ||||||||||||||    
T  28723648 tttcaagacaagtt 28723635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 269 - 436
Target Start/End: Original strand, 31305276 - 31305444
Alignment:
Q  269 ttactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat 367  Q
    |||||||| || ||||||||| ||| | |||||||| |||| |||| || ||||||||||||||  |||||| ||||||||||||||||| || ||||||    
T  31305276 ttactccctccgtccctatatgtaaaccccttttgcttttttcacatttattaagaaaagttgttggtgtaattaatgtgtctattttgtatgctaatat 31305375  T
Q  368 taccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    ||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||| || |||||||||    
T  31305376 taccaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagataaattagtagta 31305444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 2342900 - 2343031
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||| ||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  2342900 ttttcacattttttaagaaaaattgttagtttacttaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtgtgtgtattaaatttg 2342999  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||| ||||||||||||||    
T  2343000 acttttcatatttcaaggcaagttagtagtat 2343031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 33231836 - 33231967
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||| ||    
T  33231836 ttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatctg 33231935  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||| ||||    
T  33231936 acttttcatatttcaagacaagatagtggtat 33231967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 269 - 434
Target Start/End: Original strand, 15179368 - 15179534
Alignment:
Q  269 ttactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat 367  Q
    ||||||||| | ||||||||| ||| | || ||||| |||| |||| |||||||||||| |||||||||||| ||||||||||||||| || || |||||    
T  15179368 ttactcccatcgtccctatatgtaaaccccatttgcttttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgcgtaaatat 15179467  T
Q  368 taccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    ||| ||||| || ||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  15179468 tacaaaattgtcctttgtttgtatgtgtattaaatttgacttttcgtatttcaagacaagttagtag 15179534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 285 - 430
Target Start/End: Original strand, 32144285 - 32144431
Alignment:
Q  285 tatatttaagcaccttttgcattttc-acacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatctttt 383  Q
    ||||| |||||||||||||||||||  ||| |||||||||||||||||  ||| |  |||||||||||||||||| ||||||||||||||||| || |||    
T  32144285 tatatctaagcaccttttgcattttttacatttcttaagaaaagttgttggtgcatttaatgtgtctattttgtgcgttaatattaccaaattgtcattt 32144384  T
Q  384 gtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||    
T  32144385 gtttgtatgtgtataaaatttgacttttcatattttaagacaagtta 32144431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 30898670 - 30898542
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||| |||| ||    
T  30898670 ttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatgtg 30898571  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    ||  ||||||||| |||| ||||||||||    
T  30898570 actattcatattttaagataagttagtag 30898542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 431
Target Start/End: Complemental strand, 4813595 - 4813444
Alignment:
Q  281 tccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||||| ||| | |||||||| |||| |||| ||||||||||||||||| | || || ||||||||||||||||||||||||||||||||||||||     
T  4813595 tccctatatataacccccttttgcttttttcacatttcttaagaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattaccaaattatt 4813496  T
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttag 431  Q
     ||||||||||||||| | ||||||||| ||||||||||||| | |||||||    
T  4813495 ctttgtttgtatgtgtgttaaatttgacttttcatatttcaaaataagttag 4813444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 264 - 434
Target Start/End: Complemental strand, 28949114 - 28948943
Alignment:
Q  264 ataatttactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgtt 362  Q
    ||||| ||||||| || ||||||||| ||| | || ||||| |||| |||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||    
T  28949114 ataatatactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgtt 28949015  T
Q  363 aatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    |||||||| ||||| || ||||||||||||||||| ||||||||| |||  ||||||||||||| |||||||    
T  28949014 aatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaattagtag 28948943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 29140761 - 29140630
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||| | |||||| |||||||||| |||||||| |||||||||| ||||| || ||||||||||||||||| |||||||    
T  29140761 ttttcacatttcttaagaaaagttgccggtgtaattaatgtgtctgttttgtgtattaatattacaaaattgtcctttgtttgtatgtgtattaaatttg 29140662  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||| ||||    
T  29140661 acttttcatatttcaagacaagatagtggtat 29140630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 306 - 428
Target Start/End: Original strand, 38680471 - 38680593
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||||||    
T  38680471 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttg 38680570  T
Q  406 acatttcatatttcaagacaagt 428  Q
     | || |||||||||| ||||||    
T  38680571 tctttgcatatttcaaaacaagt 38680593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 300 - 437
Target Start/End: Original strand, 47643532 - 47643667
Alignment:
Q  300 tttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatca 399  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||||| | |||||||  |||||||||| ||||| || |||||||| |||||||| |    
T  47643532 tttgctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtatgttttgtg--ttaatattactaaattgtcctttgtttgcatgtgtatta 47643629  T
Q  400 aatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  47643630 aatttgacttttcaaatttcaagacaagttagtagtat 47643667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 8984794 - 8984637
Alignment:
Q  281 tccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||||| |||||  | |||||||||| |||| || ||||| ||| |||| ||||||| |||||||||| ||||||||||||||||||| ||||| ||    
T  8984794 tccctatatgtaagcctcctttgcatttttcacattttttaaggaaaattgttagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtc 8984695  T
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
     ||||||||||||||||| ||||||||| ||||||||||||||| || ||||||||||    
T  8984694 atttgtttgtatgtgtattaaatttgacttttcatatttcaagataaattagtagtat 8984637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 270 - 434
Target Start/End: Complemental strand, 15512925 - 15512760
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||||||| ||| | || ||||| |||| |||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||    
T  15512925 tactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatt 15512826  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    || ||||| || ||||||||||||||||| ||||||||| |||  ||||||||||||| |||||||    
T  15512825 actaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaattagtag 15512760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 270 - 435
Target Start/End: Complemental strand, 51390679 - 51390515
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaa-gaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat 367  Q
    ||||||| || ||||||||| ||||||||||||| ||||| |||| ||||||| ||| | |||| | || || |||||||||||||||||||||||   |    
T  51390679 tactccctccgtccctatatctaagcaccttttgaatttttcacatttcttaaagaagaattgttaatgcaattaatgtgtctattttgtgtgtta---t 51390583  T
Q  368 taccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagt 435  Q
    ||||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  51390582 taccaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 51390515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 4818011 - 4817882
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||| |||||| || ||||| |  ||||||| ||||||||| |||||| |||||||||||||||||||| |||||||    
T  4818011 ttttcacatttcttaagaaaagttgtcggtgtaattattgtgtgt--tttgtgtattaatattatcaaattgtcttttgtttgtatgtgtattaaatttg 4817914  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| |||||||||||||||||||||||    
T  4817913 acttttcaaatttcaagacaagttagtagtat 4817882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 4829811 - 4829682
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||| |||||| || ||||| |  ||||||| ||||||||| |||||| |||||||||||||||||||| |||||||    
T  4829811 ttttcacatttcttaagaaaagttgtcggtgtaattattgtgtgt--tttgtgtattaatattatcaaattgtcttttgtttgtatgtgtattaaatttg 4829714  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| |||||||||||||||||||||||    
T  4829713 acttttcaaatttcaagacaagttagtagtat 4829682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 430
Target Start/End: Complemental strand, 35366091 - 35365967
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||  ||||||||| ||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  35366091 ttttcatatttcttactaaaagttgttagtgtaagtaatgtatctattttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttg 35365992  T
Q  406 acatttcatatttcaagacaagtta 430  Q
    || |||||||||| |||||||||||    
T  35365991 acttttcatattttaagacaagtta 35365967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 34696990 - 34696859
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||| || |||||||||||||| || |||||||    
T  34696990 ttttcacattttttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgcatgaaatttg 34696891  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||| |||||||||||||  |||||||||    
T  34696890 acttttcctatttcaagacaaaatagtagtat 34696859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 44395531 - 44395662
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||| |||||| |||||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  44395531 ttttcacatttcttaagaaatgttgtcagtgtaattaatatgtttattttatgtgttaatattacaaaattatcctttgtttgtatgtatattaaatttg 44395630  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||||||||||||||| |||| ||||||    
T  44395631 atttttcatatttcaagacatgttaatagtat 44395662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 437
Target Start/End: Original strand, 51996913 - 51997083
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgc-attttcacactt-cttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat 367  Q
    ||||||| || ||||||||| ||| | || ||||| ||||||||| || ||||||||||||||||||||||| |||| ||| | |||| |||||||||||    
T  51996913 tactccctccgtccctatatgtaaaccccctttgctattttcacaatttcttaagaaaagttgtcagtgtaattaatttgtatgttttctgtgttaatat 51997012  T
Q  368 taccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttc-aagacaagttagtagtat 437  Q
    ||||||||  || ||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||    
T  51997013 taccaaatcgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaaagacaagttagtagtat 51997083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 52141284 - 52141155
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatg--tgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatt 403  Q
    |||||||| || ||||||||| || | ||||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  52141284 ttttcacattttttaagaaaaattattagtgtaattaatgcgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtattaaatt 52141185  T
Q  404 tgacatttcatatttcaagacaagttagta 433  Q
    |||| ||| |||||| ||||||||||||||    
T  52141184 tgactttttatattttaagacaagttagta 52141155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 306 - 419
Target Start/End: Original strand, 25269373 - 25269486
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  25269373 ttttcacattttttaagaaaagttgtcagtgtaaataatgtgtctgttttatgtgttaatattacgaaattttcctttgtttgtatgtgtattaaatttg 25269472  T
Q  406 acatttcatatttc 419  Q
    || |||||||||||    
T  25269473 acttttcatatttc 25269486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 32047438 - 32047568
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||| || ||||||||||||||  | |||||||    
T  32047438 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtg--ttaaatttg 32047535  T
Q  406 ac-atttcatatttcaagacaagttagtagtat 437  Q
    ||  ||||||||||||||||||| |||||||||    
T  32047536 actttttcatatttcaagacaagatagtagtat 32047568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 406
Target Start/End: Original strand, 41737112 - 41737221
Alignment:
Q  298 cttttgcattt-tcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgta 396  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  41737112 cttttgcatttatcacacttcttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtt 41737211  T
Q  397 tcaaatttga 406  Q
    | ||||||||    
T  41737212 ttaaatttga 41737221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 44335285 - 44335420
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgt---atcaaat 402  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || |||||||||| ||||   || ||||    
T  44335285 ttttcacatttcttaataaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtacgtgtataattaaat 44335384  T
Q  403 ttgacatttcatatttc-aagacaagttagtagtat 437  Q
    ||||| ||||| ||||| ||||||||||||||||||    
T  44335385 ttgacttttcaaatttcaaagacaagttagtagtat 44335420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 318 - 430
Target Start/End: Complemental strand, 16395643 - 16395531
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||| ||| || |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  16395643 ttaagaaatgttatcggtgtaattaatgtgtctattttgtatgttaatattaccaaattatcttttgtttgtatgtgtgtaaaatttgacttttcatatt 16395544  T
Q  418 tcaagacaagtta 430  Q
    |||  ||||||||    
T  16395543 tcataacaagtta 16395531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 333 - 437
Target Start/End: Complemental strand, 47071041 - 47070937
Alignment:
Q  333 agtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagt 432  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||||| |||| ||||||||  ||||||||||||||||||||||||    
T  47071041 agtgtaattaatgtgtctattttatgtgttaatattaccaaattgtcatttgtttgtatgcgtattaaatttgatttttcatatttcaagacaagttagt 47070942  T
Q  433 agtat 437  Q
    |||||    
T  47070941 agtat 47070937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 24415018 - 24415121
Alignment:
Q  328 ttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaag 427  Q
    ||||| |||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||     
T  24415018 ttgtcggtgtaattaatgtatctcttttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaaa 24415117  T
Q  428 ttag 431  Q
    ||||    
T  24415118 ttag 24415121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 304 - 437
Target Start/End: Complemental strand, 44652967 - 44652837
Alignment:
Q  304 cattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatt 403  Q
    |||||||||| ||||||||||| |||   ||||||| |||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||| |||||    
T  44652967 cattttcacatttcttaagaaatgtt---agtgtaattaatgtgtctgttttgtgttttaatattaccacattgttctttgtttgtatgtgtattaaatt 44652871  T
Q  404 tgacatttcatatttcaagacaagttagtagtat 437  Q
    |||| ||||||||||||| |||||||||||||||    
T  44652870 tgacttttcatatttcaaaacaagttagtagtat 44652837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 47754749 - 47754622
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||| |||| |||| |||| || ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||    
T  47754749 tttttacatttcttaaaaaaaattgttagtgcaattaatgtgtctattttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttg 47754650  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || ||||||||||||| | |||||||||    
T  47754649 acttttcatatttcaaaataagttagta 47754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 267 - 437
Target Start/End: Original strand, 25258286 - 25258458
Alignment:
Q  267 atttactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaat 365  Q
    |||||||||| |  ||| |||||||||||||||||| |||||| || | || |||||||||||||| |||| || ||||||||||||||| ||| || ||    
T  25258286 atttactccctctgtccttatatttaagcaccttttacatttttcatattttttaagaaaagttgttagtgcaattaatgtgtctattttatgtcttgat 25258385  T
Q  366 attaccaaattatcttttgtttgtatgtgtatcaaatttgac-atttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||| || ||||||||||||||||| |||||| ||  |||||| |||||| |||| ||||||||||    
T  25258386 attaccaaattgtcctttgtttgtatgtgtattaaatttaactttttcatgtttcaaaacaatttagtagtat 25258458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 8877780 - 8877899
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| |||||||| ||| |||||||| | ||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||| ||| |||||    
T  8877780 ttaagaaaaattgtcagtataattaatgtgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgactttttatatt 8877879  T
Q  418 tcaagacaagttagtagtat 437  Q
    |||||| ||| |||||||||    
T  8877880 tcaagataagatagtagtat 8877899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 423
Target Start/End: Original strand, 10842325 - 10842440
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| | || || |||| |||||||||||||  ||||||||||||||||||| ||||||||||||||| | |||||||    
T  10842325 ttttcacatttcttaagaaaagttgttaatgcaattaatatgtctattttgtg--ttaatattaccaaattatcgtttgtttgtatgtgtgttaaatttg 10842422  T
Q  406 acatttcatatttcaaga 423  Q
    || |||||||||||||||    
T  10842423 acttttcatatttcaaga 10842440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 34102344 - 34102454
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| || ||| ||||| |||||||||| |||||||||||||||||| ||||||||  ||||||||||||| ||| ||||||||| |||||||||    
T  34102344 ttaagaaaaattttcattgtaattaatgtgtctgttttgtgtgttaatattatcaaattattctttgtttgtatgtttattaaatttgacttttcatatt 34102443  T
Q  418 tcaagacaagt 428  Q
    |||||||||||    
T  34102444 tcaagacaagt 34102454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 281 - 420
Target Start/End: Original strand, 50692379 - 50692520
Alignment:
Q  281 tccctatatttaagcaccttttgca-ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||||| ||||| || |||||  |||||||| ||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||| ||    
T  50692379 tccctatatataagccccctttgcccttttcacatttcttaagaaaagttgtcaatgcaattaatgtgtctattttgtgtgttagtattaccaaattgtc 50692478  T
Q  380 ttttgtttgtatgtgtat-caaatttgacatttcatatttca 420  Q
     ||||||||||||||| |  |||||||||  |||||||||||    
T  50692479 ctttgtttgtatgtgtttataaatttgactgttcatatttca 50692520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 25063218 - 25063334
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||| | | || || |||||||||| |||||||||||||||||||| |||| || ||||||||||||||||| |||||| || |||||||||    
T  25063218 ttaagaaaagttattaatgcaaataatgtgtctgttttgtgtgttaatattacctaattgtcctttgtttgtatgtgtattaaatttcacttttcatatt 25063317  T
Q  418 tcaagacaagttagtag 434  Q
    ||| |||||||||||||    
T  25063318 tcacgacaagttagtag 25063334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 5322118 - 5321999
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||| ||| ||||| |||||||||| ||||||||||| ||||||| ||||| |  ||||||||||| ||||| ||| ||||| |||||||||    
T  5322118 ttaagaaaagttatcaatgtaattaatgtgtctgttttgtgtgtttatattacgaaattgttatttgtttgtatatgtattaaaattgacttttcatatt 5322019  T
Q  418 tcaagacaagttagtagtat 437  Q
    |||||||||| |||||||||    
T  5322018 tcaagacaagatagtagtat 5321999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 36084966 - 36085097
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| || ||||||||| |||||| ||| ||||||||||||||||||  |||||||| ||| ||||||||||||| ||||||     
T  36084966 ttttcacattttttaagaaaaattatcagtgtaattaatgtatctgttttgtgtgttaatattaagaaattatcctttatttgtatgtgtattaaattta 36085065  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||| ||||||| || ||||||    
T  36085066 acttttcatatttcgagacaagataatagtat 36085097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 433
Target Start/End: Original strand, 46591110 - 46591225
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||| ||||||| |||||||| | |||||||||||||||||| | |||| || ||||||| ||||||||| ||||||||  ||||| |||    
T  46591110 ttaagaaaagttgtgagtgtaattaatgtgtttgttttgtgtgttaatattatcgaattgtcctttgtttctatgtgtattaaatttgatttttcaaatt 46591209  T
Q  418 tcaagacaagttagta 433  Q
    ||||||||||||||||    
T  46591210 tcaagacaagttagta 46591225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 315 - 421
Target Start/End: Complemental strand, 9675765 - 9675659
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||||||||||||||||||||| |||| |||||  |||||||||||||||||| ||||| || ||| ||||||||||||| |||||||||  |||||    
T  9675765 ttcttaagaaaagttgtcagtgtaattaatttgtctgatttgtgtgttaatattacgaaattgtcctttatttgtatgtgtattaaatttgactattcat 9675666  T
Q  415 atttcaa 421  Q
    |||||||    
T  9675665 atttcaa 9675659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 316 - 436
Target Start/End: Complemental strand, 3143831 - 3143713
Alignment:
Q  316 tcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcata 415  Q
    |||||||||||||||  ||||||| |||||||||||||||||||  || ||||| |||||| |||||||||||||||| ||| |||| | |  |||||||    
T  3143831 tcttaagaaaagttgatagtgtaattaatgtgtctattttgtgt--tattattatcaaattgtcttttgtttgtatgtttattaaatattatttttcata 3143734  T
Q  416 tttcaagacaagttagtagta 436  Q
    |||||||||||||||||||||    
T  3143733 tttcaagacaagttagtagta 3143713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 3072147 - 3072264
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||| |||| || |||||||| |||||| |||||||||||||  ||||| | |||| |||  |||||||| ||||||||| |||||||||    
T  3072147 ttaagaaaagttgttagtgcaattaatgtgtttattttatgtgttaatattattaaattgtttttttttt--atgtgtattaaatttgacttttcatatt 3072244  T
Q  418 tcaagacaagttagtagtat 437  Q
    ||||||||||||||||||||    
T  3072245 tcaagacaagttagtagtat 3072264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 3831045 - 3831174
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||| |||||   | |||||| ||||||||||||||||||||||| ||||| || ||||||||||||| | | |||||||    
T  3831045 ttttcacattttttaagaaaagttatcagtt--attaatgtatctattttgtgtgttaatattacgaaattgtcatttgtttgtatgtatgttaaatttg 3831142  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| ||| |||||    
T  3831143 acttttcatatttcaagacaagatagaagtat 3831174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 46495305 - 46495437
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || | || |||| |||||||||||| |||||||||| |||||||||||||||||| |||||| || ||| ||||||||| ||| |||||||    
T  46495305 ttttcacatttttaaaaaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttatttgtatgtatattaaatttg 46495404  T
Q  406 acatttcatatttc-aagacaagttagtagtat 437  Q
    || ||||| ||||| ||||||||||| ||||||    
T  46495405 acttttcaaatttcaaagacaagttaatagtat 46495437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 433
Target Start/End: Original strand, 34331903 - 34331998
Alignment:
Q  338 aactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||||||||||||||||||||||| | || |||  ||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||||||||    
T  34331903 aactaatgtgtctattttgtgtgtgagtagtactgaattatcttttgtttatatgtgtattaaatttgacttttcatatttcaagagaagttagta 34331998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 433
Target Start/End: Original strand, 4081931 - 4082049
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||||||||||| | | || || |||||||| || ||||| |||||||||||| |||||||| ||||| ||||||||||| ||||||||  ||||||    
T  4081931 ttcttaagaaaagttattaatgcaattaatgtgtttagtttgtatgttaatattactaaattatcatttgtctgtatgtgtattaaatttgatttttcat 4082030  T
Q  415 atttcaagacaagttagta 433  Q
    |||| ||||||||||||||    
T  4082031 atttaaagacaagttagta 4082049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 433
Target Start/End: Original strand, 27531058 - 27531222
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||| ||| ||||  || |||||||||| |||| ||||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  27531058 tactccctccgtccctgtatgtaagttccctttgcatttttcacatttcttaagaaaagttgtcagtataattaatgtgtttgttttgtgtgttaatatt 27531157  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    ||  |||| |  ||||||||||||| ||  |||||| ||  | |||||||||||| |||||||||    
T  27531158 acttaattgttctttgtttgtatgtataaaaaatttaaccctacatatttcaagataagttagta 27531222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 44163228 - 44163351
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||| ||||||||| |||||||| | ||||||||||||||||||  ||||| || |||||||||||||||||    | ||    
T  44163228 ttttcacatttcttaaaaaaagttatcagtgtaattaatgtgtttgttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtat----tatg 44163323  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |    |||||||||||||||||||||||||||    
T  44163324 a----tcatatttcaagacaagttagtagtat 44163351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 433
Target Start/End: Original strand, 13145449 - 13145541
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||| ||||| |||||| |||||||||||||||||| || |||||||||||||| || ||||||||| |||||||||| |||| |||||||||    
T  13145449 taatatgtctgttttgtatgttaatattaccaaattgtcctttgtttgtatgtgcattaaatttgacttttcatattttaagataagttagta 13145541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 429
Target Start/End: Complemental strand, 28679916 - 28679806
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||| ||||||||| | || || |||||||||||||||||||||||||||||  ||||| | |||||||||||||||||| ||||||||  ||| |||||    
T  28679916 ttaaaaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattattaaattgt-ttttgtttgtatgtgtattaaatttgatttttaatatt 28679818  T
Q  418 tcaagacaagtt 429  Q
    |||||| |||||    
T  28679817 tcaagataagtt 28679806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 50537335 - 50537182
Alignment:
Q  18 accttctcataaaattttagctatgaaccccctaaattaatttctttgcaccgaatgatgaacccactcacatttgctattagtt---taatggttctat 114  Q
    ||||| ||||||||||| | ||||||||| ||| || ||| || ||||||||||||||| ||| |||| ||| ||||||||| ||   | |||||||| |    
T  50537335 accttttcataaaatttaaactatgaacctcctgaactaacttgtttgcaccgaatgattaactcacttacaattgctattaattcaatcatggttctgt 50537236  T
Q  115 gacattcttactctaatccattagcattcttaaaagctatgcagttcaatttca 168  Q
    | |||||||||||||| |||||   ||| ||||||||| |||||||||||||||    
T  50537235 ggcattcttactctaacccattgaaatttttaaaagctgtgcagttcaatttca 50537182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 437
Target Start/End: Complemental strand, 291704 - 291611
Alignment:
Q  344 tgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||| |||||||||||| ||||| || ||||||||||| ||||| |||||| || ||| |||||| |||| |||||||||||||    
T  291704 tgtgtctattttgtatgttaatattactaaattgtcatttgtttgtatttgtattaaatttaactttttatattttaagataagttagtagtat 291611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 426
Target Start/End: Original strand, 40261555 - 40261709
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatta 369  Q
    ||||||| || |||||||||  || ||| |||| |  ||||||| |||||| ||||||| || |||| || |||||||| ||||||||||||||||||||    
T  40261555 tactccctccgtccctatatgcaaacactttttaccctttcacatttcttatgaaaagtagttagtgcaattaatgtgtttattttgtgtgttaatatta 40261654  T
Q  370 ccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaa 426  Q
     ||||||  | ||||||  ||| ||||| ||||||||| ||| ||||||||||||||    
T  40261655 tcaaattgccctttgtt--tatatgtattaaatttgactttttatatttcaagacaa 40261709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 43189062 - 43189178
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcattt-tcacacttcttaagaaaagttgtcagtgtaacta--atgtgtctattttgtgtgttaata 366  Q
    ||||||| |||||||||||| ||||||  |||| ||||| ||||| ||||||||||||||||| |||| || ||  || |||||||||||| ||||||||    
T  43189062 tactccctccatccctatatctaagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatatgtctattttgtatgttaata 43189161  T
Q  367 ttaccaaattatctttt 383  Q
    |||||||||| ||||||    
T  43189162 ttaccaaattgtctttt 43189178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 28334322 - 28334197
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||      |||| ||||| || |||| || ||||||||| |||||||    
T  28334322 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtg------ttacgaaattgtcctttgcttatatgtgtattaaatttg 28334229  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||| ||| |||| |||| ||||    
T  28334228 aattttcatattttaaggcaagatagtggtat 28334197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 418
Target Start/End: Complemental strand, 35001377 - 35001265
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||||||||||||||||  ||  ||||| |||||||||||||| |||  ||||| || ||||||||||||||||| ||||||     
T  35001377 ttttcacatttattaagaaaagttgtcagtgtaatcaaaatgtctgttttgtgtgttaatgttatgaaattgtcctttgtttgtatgtgtattaaattta 35001278  T
Q  406 acatttcatattt 418  Q
    || || |||||||    
T  35001277 actttacatattt 35001265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 423
Target Start/End: Original strand, 10160715 - 10160825
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||       | ||||||||||  ||||  || ||||||||||||||||| |||||||    
T  10160715 ttttcacatttcttaagaaaagttatcagtgtaattaatgtgtct-------gcgttaatattatgaaatattcatttgtttgtatgtgtattaaatttg 10160807  T
Q  406 acatttcatatttcaaga 423  Q
    || |||||||||||||||    
T  10160808 acttttcatatttcaaga 10160825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 436
Target Start/End: Complemental strand, 23393607 - 23393492
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||| | ||||| |||||| |||||||||||| ||||| |||  ||||| || |||||||||||||||||   |||||||  ||||||||    
T  23393607 ttaagaaaagttgttaatgtaattaatgtatctattttgtgtattaat-ttattaaattgtcatttgtttgtatgtgtat--tatttgactattcatatt 23393511  T
Q  418 tcaagacaagttagtagta 436  Q
    ||||||||||||| |||||    
T  23393510 tcaagacaagttattagta 23393492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 15457878 - 15457795
Alignment:
Q  350 tattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    ||||||||||| |||||||| |||||| || ||||||||||||||||| ||||||||  ||||||||||||  |||| ||||||    
T  15457878 tattttgtgtgataatattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcagaacaaattagta 15457795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 5852938 - 5852831
Alignment:
Q  324 aaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaaga 423  Q
    ||||||| | |||||| |||||||| |  ||| |||||||||||| | ||||| || |||||||| |||||||| ||||||||| |||||||||||||||    
T  5852938 aaagttgccggtgtaattaatgtgtgt--tttatgtgttaatattccgaaattgtcctttgtttgcatgtgtattaaatttgacttttcatatttcaaga 5852841  T
Q  424 caagttagta 433  Q
     ||| |||||    
T  5852840 taagatagta 5852831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 437
Target Start/End: Original strand, 13352832 - 13352960
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||| ||||||||||| || || |||  || |||||||||| |||| ||||||||||||| |||||| || ||| ||||||  ||||| | ||||| |    
T  13352832 ttcacatttcttaagaaatgtagttagttcaattaatgtgtctgttttatgtgttaatattagcaaattgtcatttatttgta--tgtattatatttgcc 13352929  T
Q  408 atttcatatttcaagac-aagttagtagtat 437  Q
     ||||||||||| |||| |||||||||||||    
T  13352930 ttttcatatttcgagacaaagttagtagtat 13352960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 436
Target Start/End: Complemental strand, 46732988 - 46732937
Alignment:
Q  385 tttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    ||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  46732988 tttgtatgtgtattaaatttgacttttcatatttcaagacaaattagtagta 46732937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 426
Target Start/End: Original strand, 32715567 - 32715634
Alignment:
Q  358 gtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaa 426  Q
    ||||||||||||| |||||||  |||||| |||||||||| ||||||||| ||| ||||||||||||||    
T  32715567 gtgttaatattacgaaattatactttgtt-gtatgtgtattaaatttgactttttatatttcaagacaa 32715634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 387
Target Start/End: Original strand, 34012070 - 34012134
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgttt 387  Q
    |||||||||||||| || |||||||||| |||| |||||||||||||  ||||| ||||||||||    
T  34012070 aaaagttgtcagtgcaattaatgtgtctgttttatgtgttaatattatgaaattgtcttttgttt 34012134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 34012558 - 34012614
Alignment:
Q  381 tttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||| ||||||||| |||||| || ||||||||||||||||||| |||||||||    
T  34012558 tttgtttatatgtgtattaaatttaacttttcatatttcaagacaagatagtagtat 34012614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 13698593 - 13698648
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattac 370  Q
    ||||||||||||||||| ||||||| |||| ||| ||||||| |||||||||||||    
T  13698593 ttcttaagaaaagttgttagtgtaattaatatgtttattttgcgtgttaatattac 13698648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 368
Target Start/End: Complemental strand, 29302556 - 29302494
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    |||||||| |||||||||||||||||||||||||  ||||| | | |||||| ||||||||||    
T  29302556 ttttcacatttcttaagaaaagttgtcagtgtaatcaatgtatttgttttgtatgttaatatt 29302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 40205657 - 40205591
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||| |||||||||||||||| |||||||| | ||| || ||||||||| |||| ||||||||||||    
T  40205657 taatatgtctattttgtgtgtgaatattactagattgtcctttgtttgtttgtgaatcaaatttgac 40205591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 47133547 - 47133463
Alignment:
Q  306 ttttcacacttcttaagaaaag-ttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgt 389  Q
    |||||||| ||||||| ||||  |||| | ||||| |||||||| ||||||||||||||||||||  ||||| || |||||||||    
T  47133547 ttttcacatttcttaaaaaaaaattgttaatgtaattaatgtgtttattttgtgtgttaatattattaaattgtcatttgtttgt 47133463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 397
Target Start/End: Original strand, 6282470 - 6282561
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtat 397  Q
    |||||||  ||| |||||||| |||| |||  || ||||||||||||||| |||||||||||||  ||||| || ||||||| ||| |||||    
T  6282470 ttttcacgtttcataagaaaaattgttagtacaattaatgtgtctattttatgtgttaatattataaaattgtcctttgtttatatatgtat 6282561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 43414861 - 43414766
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    |||||||| |||||||| |||||||||||| | | | | |||||||||||||||||  |||||| |  |||||||||| |||  ||||||| ||||    
T  43414861 taatgtgtatattttgtatgttaatattactataatgtattttgtttgtatgtgtagtaaatttaatttttcatattttaaggtaagttagcagta 43414766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 9684825 - 9684755
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    |||||||| || |||| ||||||| ||  ||||| |||||||||| ||||||| ||||||||||| |||||    
T  9684825 ttttcacattttttaaaaaaagttatcgatgtaattaatgtgtctgttttgtgcgttaatattacaaaatt 9684755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 437
Target Start/End: Complemental strand, 40613009 - 40612935
Alignment:
Q  363 aatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| |||||||  |||||||  ||||||||  |||||||| ||||||||||||  | |||||||||||||    
T  40613009 aatattactaaattattctttgtttaaatgtgtatttaatttgacttttcatatttcattataagttagtagtat 40612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 414
Target Start/End: Complemental strand, 22786804 - 22786731
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||||||| ||||||| ||||| |||| ||||||||||||| || || ||||||  ||||| || ||||||    
T  22786804 taatgtgtctagtttgtgtattaattttactaaattatcttttgcttttaggtgtatttaatttaacttttcat 22786731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 48573174 - 48573118
Alignment:
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    |||||||||||||||||| |||||| |  |||||||||| |||  ||||||||||||    
T  48573174 ttttgtttgtatgtgtattaaatttaatttttcatattttaaggtaagttagtagta 48573118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 4089608 - 4089477
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||    
T  4089608 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattatcttttgtttgtatatgtattaaatttg 4089509  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||||||||    
T  4089508 acttttcatatttcaagacaagatagtagtat 4089477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 423
Target Start/End: Complemental strand, 31373843 - 31373689
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| |||||||||||| ||||||| ||||||||||| |||| |||||||||||| |||| || | || ||||||||||||||||||||||||||||    
T  31373843 tactccctccatccctatatctaagcactttttgcatttttcacatttcttaagaaaaattgttagggcaattaatgtgtctattttgtgtgttaatatt 31373744  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaaga 423  Q
    || ||||| || ||||||||||||||||| ||||||||| |||||||||||||||    
T  31373743 actaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaga 31373689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 46783975 - 46783818
Alignment:
Q  281 tccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||||| ||||||||||||  ||||| |||| ||||||||||||||| | |||| || |||||||||||| || |||||||||||||||||||| ||    
T  46783975 tccctatatctaagcaccttttatatttttcacatttcttaagaaaagttattagtgaaattaatgtgtctatcttatgtgttaatattaccaaattgtc 46783876  T
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  46783875 ttttgttcgtatgtgtattaaatttgacttttcatatttcaagataagttagtagtat 46783818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 1324705 - 1324836
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||| ||||||||| |||||||||| |||||||||||||| ||| |||||| || ||||||||||||||||| |||||||    
T  1324705 ttttcacatttcttaagaaatgttatcagtgtaattaatgtgtctgttttgtgtgttaatcttatcaaattgtcatttgtttgtatgtgtattaaatttg 1324804  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||||||||||    
T  1324805 acttttcatatttcaagacaagttagtagtat 1324836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 27213484 - 27213615
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||| ||| ||| |||    
T  27213484 ttttcacatttcttaagaaaagttgttagtgcaactaatatgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtctattaaaattg 27213583  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||||||||||||||||| ||||||    
T  27213584 acatttcatatttcaagacaagttaatagtat 27213615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 21809755 - 21809624
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||  ||||| |||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  21809755 ttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttttgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttg 21809656  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||| |||||||||||||||    
T  21809655 acttttcatatttcaaaacaagttagtagtat 21809624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 433
Target Start/End: Original strand, 25750365 - 25750492
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  25750365 ttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttg 25750464  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    |  ||||||||||||||||||| |||||    
T  25750465 atttttcatatttcaagacaaggtagta 25750492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 48610244 - 48610113
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||| ||||| |||||||||| |||||||| |||||||||| ||||| |||||||||||||||||||| |||||||    
T  48610244 ttttcacattttttaagaaaagttgtcactgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcttttgtttgtatgtgtattaaatttg 48610145  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||| ||||    
T  48610144 acttttcatatttcaagacaagatagtggtat 48610113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 306 - 427
Target Start/End: Original strand, 37673734 - 37673855
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||| |||||||    
T  37673734 ttttcacatttcttaagaaatgttgtgagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcttttgtttgtatgtgtattaaatttg 37673833  T
Q  406 acatttcatatttcaagacaag 427  Q
    || |||||||||||||||||||    
T  37673834 acttttcatatttcaagacaag 37673855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 20123447 - 20123579
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| || ||||||||||||||||| |||||||    
T  20123447 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaatttg 20123546  T
Q  406 acatttcatatttc-aagacaagttagtagtat 437  Q
    |  ||||| ||||| ||||||||||| ||||||    
T  20123547 aattttcaaatttcaaagacaagttattagtat 20123579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 2276685 - 2276554
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||||||||||  |||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  2276685 ttttcacatttcttaacaaaagttgtcagtgtagttaatttgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttg 2276586  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| ||||||||| |||||| ||||||    
T  2276585 acttttcaaatttcaagataagttactagtat 2276554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 18122150 - 18122019
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| || ||||||| |||| |||||||||||||| ||||| || |||||||| |||||||| |||||||    
T  18122150 ttttcacatttcttaagaaaagttgtgagtgtaattagtgtgtctgttttatgtgttaatattactaaattttcctttgtttgaatgtgtataaaatttg 18122051  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||||||||||    
T  18122050 acttttcatatttcaagataagttagtagtat 18122019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 21388239 - 21388370
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| ||||| |||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  21388239 ttttcacatttcttaagaaaatttgtcggtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttg 21388338  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| |||| |||| |||||||||||||    
T  21388339 acttttcaaattttaagataagttagtagtat 21388370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 37048032 - 37048163
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||| || ||||||| || ||||||||||||||||| ||||||     
T  37048032 ttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatgttcccaaattgtcctttgtttgtatgtgtattaaattta 37048131  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    ||  |||||||||||| |||||||||||||||    
T  37048132 actattcatatttcaatacaagttagtagtat 37048163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 48193612 - 48193743
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||| |||||||    
T  48193612 ttttcacattttttaagaaaaattgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttatattagtattaaatttg 48193711  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||| ||||| ||||    
T  48193712 acttttcatatttcaagacaaattagttgtat 48193743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 426
Target Start/End: Original strand, 10685082 - 10685202
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  10685082 ttttcatatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 10685181  T
Q  406 acatttcatatttcaagacaa 426  Q
    || ||||||||||||||||||    
T  10685182 acttttcatatttcaagacaa 10685202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 422
Target Start/End: Complemental strand, 37491727 - 37491611
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| |||| || ||||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  37491727 ttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttatatgttaatattaccaaattatcctttgtttgtatatgtattaaatttg 37491628  T
Q  406 acatttcatatttcaag 422  Q
    || ||||||||||||||    
T  37491627 acttttcatatttcaag 37491611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 48767561 - 48767693
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttg-tttgtatgtgtatcaaattt 404  Q
    |||||||| ||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||| || |||| ||||||||||||| ||||||    
T  48767561 ttttcacatttcttaaaaaacgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgttttgtatgtgtattaaattt 48767660  T
Q  405 gacatttcatatttcaagacaagttagtagtat 437  Q
    ||| ||||||||||||||||| |||| ||||||    
T  48767661 gacttttcatatttcaagacatgttattagtat 48767693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 19236175 - 19236044
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||| ||||||||||||| ||||||| |||||||||  |||||| |||||||||||||| ||| |  ||||||||||||||||| |||||||    
T  19236175 ttttcacatttcgtaagaaaagttgttagtgtaattaatgtgtcggttttgtatgttaatattaccatattgttctttgtttgtatgtgtattaaatttg 19236076  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||||||||||||||||||||||    
T  19236075 atttttcatatttcaagacaagttagtagtat 19236044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 436
Target Start/End: Complemental strand, 29636185 - 29636019
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||||||| ||| | || |||||||||| |||| || |||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  29636185 tactccctccgtccctatatgtaaaccccctttgcattttacacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatatt 29636086  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    ||||||||  | ||||||| |||||||||  ||||| |  ||||||||||||||||||||||||||||    
T  29636085 accaaatt-gcctttgtttttatgtgtatttaatttaatttttcatatttcaagacaagttagtagta 29636019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 40263708 - 40263839
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||||||||| |||||| |||||||||| |||||  |||||||||||| ||||| || ||||||||||||||||| |||||||    
T  40263708 ttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgttttgattgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttg 40263807  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| ||| |||||||||    
T  40263808 acttttcatatttcaagataagatagtagtat 40263839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 40740947 - 40741080
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttg--tatgtgtatcaaatt 403  Q
    |||||||| ||||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||  ||||||| | |||||    
T  40740947 ttttcacatttcttaagaaaagttgttaatgtaattaatatgtctattttgtgtgttaatattaccaaattatcatttctttgtatatgtgtgttaaatt 40741046  T
Q  404 tgacatttcatatttcaagacaagttagtagtat 437  Q
    |||| ||||||||||||||| ||||||| |||||    
T  40741047 tgacttttcatatttcaagataagttagcagtat 40741080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 306 - 427
Target Start/End: Original strand, 36116318 - 36116439
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| |||||| |||||| |||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  36116318 ttttcacatttcttaagaaatgttgtcggtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttg 36116417  T
Q  406 acatttcatatttcaagacaag 427  Q
    || ||| |||||||||||||||    
T  36116418 actttttatatttcaagacaag 36116439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 26632843 - 26632971
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||| ||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||    
T  26632843 ttttcacattttttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcttttgtttgtatgtgcattaaatttg 26632942  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    || |||  ||||||||||||| |||||||    
T  26632943 actttttgtatttcaagacaaattagtag 26632971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 323 - 434
Target Start/End: Complemental strand, 21392984 - 21392873
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaag 422  Q
    |||| |||| |||| || |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||    
T  21392984 aaaatttgttagtgcaattaatgtgtctattttgagtgttaatattaccaaattatattttgtttgtatgtgtattaaatttgactttttatatttcaag 21392885  T
Q  423 acaagttagtag 434  Q
    ||| ||||||||    
T  21392884 acatgttagtag 21392873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 26201103 - 26200945
Alignment:
Q  281 tccctatatttaagcaccttttgcatttt--cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattat 378  Q
    ||||||||| |||||| | ||||||||||  || | ||||||||||||||| | |||| || || |||||||||||||||| ||||||||| ||||||||    
T  26201103 tccctatatgtaagcatcctttgcattttttcatatttcttaagaaaagttattagtgcaattattgtgtctattttgtgtattaatattatcaaattat 26201004  T
Q  379 cttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
      ||||||||||||||||| |||||| || |||||||||| || |||||||||||||||    
T  26201003 tctttgtttgtatgtgtattaaatttaacttttcatattttaaaacaagttagtagtat 26200945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 318 - 427
Target Start/End: Original strand, 35128393 - 35128502
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||||  ||||| || ||||||||||||||||| ||||||||  |||||||||    
T  35128393 ttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatattatgaaattgtcctttgtttgtatgtgtattaaatttgaattttcatatt 35128492  T
Q  418 tcaagacaag 427  Q
    ||||||||||    
T  35128493 tcaagacaag 35128502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 5334491 - 5334372
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| |||| ||||||| |||||||| | |||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||| |||    
T  5334491 ttaagaaaaattgttagtgtaattaatgtgtttgttttgtatgttaatattaccaaactatcatttgtttgtatgtgtattaaatttgacttttcaaatt 5334392  T
Q  418 tcaagacaagttagtagtat 437  Q
    ||||||||| ||||| ||||    
T  5334391 tcaagacaaattagtggtat 5334372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 429
Target Start/End: Complemental strand, 6376241 - 6376118
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| ||||||| |||||| ||| ||||||||||||||||||| ||||| || ||||||||||||||||| ||||||     
T  6376241 ttttcacatttcttaagaaaaattgttagtgtaattaatgtctctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaattta 6376142  T
Q  406 acatttcatatttcaagacaagtt 429  Q
    || ||||| |||| ||||||||||    
T  6376141 acttttcaaattttaagacaagtt 6376118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 421
Target Start/End: Complemental strand, 21801164 - 21801049
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||| ||||| || ||| ||||||||||||| |||||||    
T  21801164 ttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttatttgtatgtgtattaaatttg 21801065  T
Q  406 acatttcatatttcaa 421  Q
    || ||| |||||||||    
T  21801064 actttttatatttcaa 21801049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 433
Target Start/End: Original strand, 23876034 - 23876161
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||| ||||||  |||| |||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||     
T  23876034 ttttcacatttcttaaaaaaagttgttagtgtagttaatatgtccattttatgtgttaatattactaaattgtcttttgtttgtatgtgtattaaattta 23876133  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || |||| ||||||||||||| ||||||    
T  23876134 acttttcgtatttcaagacaaattagta 23876161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 316 - 423
Target Start/End: Original strand, 49100678 - 49100785
Alignment:
Q  316 tcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcata 415  Q
    |||||| | ||||||||||||||| |||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||| |||||||    
T  49100678 tcttaaaataagttgtcagtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcata 49100777  T
Q  416 tttcaaga 423  Q
    ||||||||    
T  49100778 tttcaaga 49100785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 15827250 - 15827400
Alignment:
Q  18 accttctcataaaattttagctatgaaccccctaaattaatttctttgcaccgaatgatgaacccactcacatttgctattagtttaatggttctatgac 117  Q
    |||||||| |||||| ||| ||||||||| ||| || |||||||||||||||||||||||||| || |||| ||| ||| ||||| |||||||   || |    
T  15827250 accttctcgtaaaatcttaactatgaacctcctcaactaatttctttgcaccgaatgatgaactcagtcaccttttctactagttcaatggtttcgtggc 15827349  T
Q  118 attcttactctaatccattagcattcttaaaagctatgcagttcaatttca 168  Q
    ||||||||||| | |||||  |||||||||||||| |||||||||||||||    
T  15827350 attcttactcttacccattgacattcttaaaagctgtgcagttcaatttca 15827400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 421
Target Start/End: Original strand, 21752518 - 21752640
Alignment:
Q  300 tttgcattttc-acacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatc 398  Q
    ||||||||||| ||| ||||||| ||||||||| |||| || |||| ||| ||||||||| |||||||||||||||||||| |||||||||||||||||     
T  21752518 tttgcattttccacatttcttaaaaaaagttgttagtgcaattaatttgtttattttgtgggttaatattaccaaattatcatttgtttgtatgtgtatt 21752617  T
Q  399 aaatttgacatttcatatttcaa 421  Q
    ||||||||| ||||| |||||||    
T  21752618 aaatttgacttttcacatttcaa 21752640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 43465239 - 43465129
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||  ||||||||||||| |||||||||| |||||||||||| ||||  |||||| |||||||||||||||||||| ||||||||| |||||||||    
T  43465239 ttaagaagtgttgtcagtgtaattaatgtgtctgttttgtgtgttagtattttcaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatt 43465140  T
Q  418 tcaagacaagt 428  Q
    |||||| ||||    
T  43465139 tcaagataagt 43465129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 36726271 - 36726151
Alignment:
Q  316 tcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcata 415  Q
    |||||||| | ||||| ||||||| |||||||| | ||||||||||||||||||||||||| || ||||||| ||||||||| ||||||||| |||||||    
T  36726271 tcttaagagatgttgttagtgtaattaatgtgtttgttttgtgtgttaatattaccaaattgtcctttgttt-tatgtgtattaaatttgacttttcata 36726173  T
Q  416 tttcaagacaagttagtagtat 437  Q
    |||||| ||||||| |||||||    
T  36726172 tttcaaaacaagttggtagtat 36726151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 28663753 - 28663883
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||||| | |  || ||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||| |||||||    
T  28663753 ttttcacatttcttaagaaa-gttgttaatacaattaatgtgtctattttgtgtgttaatattatcaaattattatttgtttgtatgtatattaaatttg 28663851  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || | ||||||||||||| || ||||||||||    
T  28663852 acttctcatatttcaagataaattagtagtat 28663883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 334 - 437
Target Start/End: Complemental strand, 42983694 - 42983591
Alignment:
Q  334 gtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||||| |||||||||| |||| | |||||||||||  ||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  42983694 gtgtaattaatgtgtctcttttatatgttaatattattaaattgtcttatgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagta 42983595  T
Q  434 gtat 437  Q
    ||||    
T  42983594 gtat 42983591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 432
Target Start/End: Original strand, 35960375 - 35960501
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| | ||||| |||| |||| |||  || ||||||||||||||| ||| || ||||||| |||||||||||||||||||||||| | |||||||    
T  35960375 ttttcacattccttaaaaaaaattgttagtacaattaatgtgtctattttatgtatttatattactaaattatcttttgtttgtatgtgtgttaaatttg 35960474  T
Q  406 acatttcatatttcaagacaagttagt 432  Q
    || ||||||||||||||||| ||||||    
T  35960475 acttttcatatttcaagacaggttagt 35960501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 27163010 - 27162880
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||| |||||||| |||| || ||||||||  ||||||||| |||||||| ||||||| || ||||||||||||||||| ||||||     
T  27163010 ttttcacatttcttaagtaaagttgttagtgcaattaatgtgt--attttgtgttttaatattgccaaattgtcatttgtttgtatgtgtattaaattta 27162913  T
Q  406 ac-atttcatatttcaagacaagttagtagtat 437  Q
    ||  |||||||||||||||||||||| ||||||    
T  27162912 actttttcatatttcaagacaagttaatagtat 27162880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 433
Target Start/End: Original strand, 33181292 - 33181419
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||| ||| ||||||||||||  |||||||| | |||||| | |||||||||||||||| || ||||||||||||||||| ||||||     
T  33181292 ttttcatatttcttaaaaaatgttgtcagtgtagttaatgtgtttgttttgtatattaatattaccaaattgtcatttgtttgtatgtgtattaaattta 33181391  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || ||||||| || ||||||||||||||    
T  33181392 acttttcatactttaagacaagttagta 33181419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 433
Target Start/End: Complemental strand, 43601270 - 43601146
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||| ||||||||||||||||| | ||||| | | |||||| |||||| ||| | |||||| ||||| || ||||||| ||||||||| |||||||||    
T  43601270 ttcacatttcttaagaaaagttgttaatgtaattgaggtgtctgttttgt-tgtaagtattacaaaattgtcctttgtttatatgtgtattaaatttgac 43601172  T
Q  408 atttcatatttcaagacaagttagta 433  Q
     |||||||||||||||||||||||||    
T  43601171 ttttcatatttcaagacaagttagta 43601146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 315 - 416
Target Start/End: Original strand, 29992981 - 29993082
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||||||||||||| |||| || ||||||||||||||||| |||||||| |||||||||||| ||||||||| ||| | | |||||| || ||||||    
T  29992981 ttcttaagaaaagttgttagtgcaattaatgtgtctattttgtatgttaatactaccaaattatcatttgtttgtgtgtttgttaaatttaacttttcat 29993080  T
Q  415 at 416  Q
    ||    
T  29993081 at 29993082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 306 - 423
Target Start/End: Complemental strand, 42993296 - 42993179
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||||||||| | |  || ||| ||||||||||| ||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  42993296 tttttacatttcttaagaaaagttgttaatacaattaacgtgtctattttatgtgttaatattatcaaattaacctttgttagtatgtgtattaaatttg 42993197  T
Q  406 acatttcatatttcaaga 423  Q
    |  |||||||||||||||    
T  42993196 atttttcatatttcaaga 42993179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 44648810 - 44648703
Alignment:
Q  321 agaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt--accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatattt 418  Q
    ||||||||||| | |||||  |||||||||||||||| ||||||||||  | |||||| ||||| |||||||||||||| ||||||||  ||||||||||    
T  44648810 agaaaagttgttaatgtaatcaatgtgtctattttgtatgttaatattggatcaaattgtctttagtttgtatgtgtattaaatttgatttttcatattt 44648711  T
Q  419 caagacaa 426  Q
    ||||||||    
T  44648710 caagacaa 44648703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 27170009 - 27170139
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||| ||  ||| |||| || |||| |||||||||||||||| |||||||||||||| |  ||||||  ||||| ||| |||||||    
T  27170009 ttttcacatttcttaagacaacatgttagtgcaattaatttgtctattttgtgtgt-aatattaccaaattgtgatttgttcatatgtctattaaatttg 27170107  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||| ||| ||||||    
T  27170108 acttttcatatttcaagacaaattaatagtat 27170139  T

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Target: chr7; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 10408641 - 10408545
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||| ||||||||| ||| |||| || || || ||||||||||||||||| ||||||||  |||||||||||||  ||||||||||||||    
T  10408641 taatgtgtctagtttgtgtgtgaattttactaatttgtcctttgtttgtatgtgtattaaatttgatttttcatatttcaatgcaagttagtagtat 10408545  T

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Target: chr7; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 10595205 - 10595116
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtat 397  Q
    |||||||| ||||||||||||||||||||| ||| |||| ||||| ||||||||||||  ||||| ||| | ||||||||||||||||||||    
T  10595205 ttttcacatttcttaagaaaagttgtcagtataattaatatgtctgttttgtgtgtta--attacgaaactgtcttttgtttgtatgtgtat 10595116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 28038950 - 28038865
Alignment:
Q  353 tttgtgtgttaatattaccaaattatctttt-gtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||||||||  | |||| |||||||| ||||| |||||| || ||||||||||||||||||||||| |||||    
T  28038950 tttgtgtgttaatattaccaaatggtttttttgtttgtatttgtattaaatttaacttttcatatttcaagacaagttagcagtat 28038865  T

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Target: chr7; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 29723472 - 29723589
Alignment:
Q  321 agaaaagttgtcagtgtaactaatgtgtctatttt-gtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttc 419  Q
    |||||| |||||| ||||| ||||||| || |||| ||||| ||||||||| |||| ||| |||||||| || | ||| ||||||||| |||||||||||    
T  29723472 agaaaatttgtcattgtaattaatgtgcctgtttttgtgtggtaatattacgaaataatcatttgtttgcatatatattaaatttgacttttcatatttc 29723571  T
Q  420 aagacaagttagtagtat 437  Q
    || ||||| |||||||||    
T  29723572 aacacaagatagtagtat 29723589  T

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Target: chr7; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 47458248 - 47458168
Alignment:
Q  352 ttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagt 432  Q
    ||||||||||||||||||  ||||| || ||||||||||||||||| |||||| | |||| ||||||||||||||| ||||    
T  47458248 ttttgtgtgttaatattatgaaattgtcctttgtttgtatgtgtattaaatttaatattttatatttcaagacaagatagt 47458168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 390
Target Start/End: Complemental strand, 41672662 - 41672591
Alignment:
Q  319 taagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgta 390  Q
    |||||||| |||| ||||||| ||||||||||||||||||||| ||||| || |||||||| ||||||||||    
T  41672662 taagaaaacttgttagtgtaattaatgtgtctattttgtgtgtgaatataactaaattatcctttgtttgta 41672591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 24700751 - 24700673
Alignment:
Q  359 tgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||| |  ||||||||||||||||| ||  ||||| ||||||||||||| | |||||||||||||    
T  24700751 tgttaatattaccaaattgttctttgtttgtatgtgtattaatgttgacttttcatatttcaaaataagttagtagtat 24700673  T

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Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 40211373 - 40211295
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgta 396  Q
    ||||||||| ||||  |||||| |||||||||| ||||||||||||||||||| ||||| || ||| ||||||||||||    
T  40211373 ttaagaaaaattgtttgtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcatttatttgtatgtgta 40211295  T

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Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 437
Target Start/End: Original strand, 43026053 - 43026149
Alignment:
Q  342 aatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttga-catttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||||| |||||||  ||| |||||||||| ||||||||||| |||||| |   |||||||||| |||| |||| ||||||||    
T  43026053 aatgtgtctattttgtgtgtgaatattattaaactatcttttgtatgtatgtgtattaaatttaattttttcatattttaagagaagtaagtagtat 43026149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 13907791 - 13907720
Alignment:
Q  366 attaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||| |||||| || ||||||||||||| ||  ||||||||| |||||||||| ||||||||||||||||||    
T  13907791 attatcaaattgtcatttgtttgtatgtttaataaatttgacttttcatatttaaagacaagttagtagtat 13907720  T

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Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 37136236 - 37136303
Alignment:
Q  364 atattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttag 431  Q
    |||| ||||||||||| ||||||||||||||| | ||||||||| |||||||||| |||| |||||||    
T  37136236 atataaccaaattatcatttgtttgtatgtgtgttaaatttgacttttcatattttaagataagttag 37136303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 388
Target Start/End: Original strand, 25828130 - 25828200
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttg 388  Q
    |||||||||||||| |||  || |||| || |||||||||||||||||||||| ||||||| |||||||||    
T  25828130 ttaagaaaagttgttagtaaaattaatatgcctattttgtgtgttaatattacgaaattatattttgtttg 25828200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 415
Target Start/End: Complemental strand, 19477512 - 19477411
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaa----ttatcttttgtttgtatgtgtatcaaatttgacatttca 413  Q
    |||||||||||||| ||||||| ||||| || |||||| | ||||||| ||||||||    || | |||||||||||||||||| ||||| ||| |||||    
T  19477512 ttaagaaaagttgttagtgtaattaatgcgtttattttatatgttaatgttaccaaattgttttttttttgtttgtatgtgtattaaattcgacttttca 19477413  T
Q  414 ta 415  Q
    ||    
T  19477412 ta 19477411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 437
Target Start/End: Original strand, 4068413 - 4068528
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttga-catttcatatttcaa 421  Q
    ||||||||| | || || |||| | |||||||||| ||||||||||| ||||||||  ||||||||||||||||| | |||| | | |||||||| | ||    
T  4068413 aaaagttgttaatgcaattaatatatctattttgtatgttaatattatcaaattattctttgtttgtatgtgtattagatttaaccttttcatatcttaa 4068512  T
Q  422 gacaagttagtagtat 437  Q
    || || ||||||||||    
T  4068513 gataaattagtagtat 4068528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 20124148 - 20124258
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || |||||  || ||||| |||||||| |||| |||| || ||||||||||||||  |||||| ||||||||||||||| ||| || | |||    
T  20124148 tactccctccgtcccttaatgtaagccccttttgcttttttcacattttttaagaaaagttgttggtgtaattaatgtgtctattttatgtattgacatt 20124247  T
Q  369 accaaattatc 379  Q
    || ||||||||    
T  20124248 actaaattatc 20124258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 391
Target Start/End: Original strand, 12645602 - 12645635
Alignment:
Q  358 gtgttaatattaccaaattatcttttgtttgtat 391  Q
    |||||||||||||||||||||| |||||||||||    
T  12645602 gtgttaatattaccaaattatcatttgtttgtat 12645635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 413
Target Start/End: Complemental strand, 8444131 - 8444059
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttca 413  Q
    ||||||||  ||||||||||| || | ||| ||||||||||||||||  ||||||||  |||||||| |||||    
T  8444131 taatgtgttgattttgtgtgtgaaaactactaaattatcttttgtttacatgtgtatttaatttgacttttca 8444059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 434
Target Start/End: Original strand, 21759789 - 21759845
Alignment:
Q  378 tcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    ||||||||||| ||| |||| |||||| || |||| ||||||||||||| |||||||    
T  21759789 tcttttgtttgaatgggtattaaatttaacttttcgtatttcaagacaaattagtag 21759845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 432
Target Start/End: Complemental strand, 38729725 - 38729673
Alignment:
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagt 432  Q
    |||||||||||||||||| |||||| |  |||||||||| |||||||| ||||    
T  38729725 ttttgtttgtatgtgtattaaattttatttttcatattttaagacaagctagt 38729673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 30153330 - 30153199
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||    
T  30153330 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgataatattaccaaattatcctttatttgtatgtgtattaaatttg 30153231  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||||||||||    
T  30153230 acttttcatatttcaagacaagttagtagtat 30153199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 41920172 - 41920015
Alignment:
Q  281 tccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||||||||| |||| || |||| | ||||||||||||||||||||||||||||| ||    
T  41920172 tccctatatataagcaccttttacatttttcacatttcttaagaaaagttgttagtgcaattaatatttctattttgtgtgttaatattaccaaattgtc 41920073  T
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||||||| |  ||||||||| ||||||||||||||| |||||||||||||    
T  41920072 ttttgtttgtatgtgaaataaatttgacttttcatatttcaagataagttagtagtat 41920015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 16070428 - 16070559
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  16070428 ttttcacatttcttaagaaatgctgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattatcttttgtttatatatgtattaaatttg 16070527  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||| |||||||||||||||    
T  16070528 acttttcatatttcaatacaagttagtagtat 16070559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 25477222 - 25477353
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  25477222 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttatgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttg 25477321  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||||||||    
T  25477322 acttttcatatttcaagacaagatagtagtat 25477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 20262502 - 20262371
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| |  ||||||||||||||||| |||||||    
T  20262502 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgttatttgtttgtatgtgtattaaatttg 20262403  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||| ||||| |||||||||    
T  20262402 acttttcatatttcaaaacaagatagtagtat 20262371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 20291337 - 20291468
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||  | ||||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||    
T  20291337 ttttcacatttcttaagaaaagttggtaatgtaattaatgtgtctattttgtgggttaatattactaaattatcatttgtttgtatgtgtattaaatttg 20291436  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||||||||||    
T  20291437 acttttcatatttcaagataagttagtagtat 20291468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 22750950 - 22750819
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||| |||||| |||||| ||| |||||||| |||||||||||||||| || ||||||||||||||||| |||||||    
T  22750950 ttttcacatttcttaagaaaagttgtctgtgtaattaatgtatctgttttgtgtattaatattaccaaattgtcatttgtttgtatgtgtattaaatttg 22750851  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||| ||||||||||    
T  22750850 acttttcatatttcaagacaacttagtagtat 22750819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 29584875 - 29585022
Alignment:
Q  291 taagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgt 389  Q
    |||||||| |||||||||| |||| |||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||| || |||||||||    
T  29584875 taagcaccctttgcatttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattctgtgtgttaatattaccaaattgtcatttgtttgt 29584974  T
Q  390 atgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| ||||||||| ||| |||||| ||||||||||| ||||||    
T  29584975 atgtgtattaaatttgactttttatattttaagacaagttaatagtat 29585022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 33246593 - 33246474
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||| ||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||    
T  33246593 ttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatttgactttacatatt 33246494  T
Q  418 tcaagacaagttagtagtat 437  Q
    ||||||||||||||||||||    
T  33246493 tcaagacaagttagtagtat 33246474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 37625233 - 37625102
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||    
T  37625233 ttttcacatttcttaagaaaagttgtcagtataattaatgtgtttattttgtgtgttaatattactaaattatcatttgtttatatgtgtattaaatttg 37625134  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||  ||||||||||||    
T  37625133 acttttcatatttcaagattagttagtagtat 37625102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 306 - 431
Target Start/End: Complemental strand, 37175129 - 37175005
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |    
T  37175129 ttttcacatttcttaagaaaagttgtt-gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaattag 37175031  T
Q  406 acatttcatatttcaagacaagttag 431  Q
    || ||||||||||||||| |||||||    
T  37175030 acttttcatatttcaagataagttag 37175005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 14602763 - 14602632
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||| || ||||||||||||||||| |||||||    
T  14602763 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttg 14602664  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| |||||| |||| |||||||||||||    
T  14602663 actttttatattttaagataagttagtagtat 14602632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 308 - 423
Target Start/End: Original strand, 34543701 - 34543816
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||    
T  34543701 ttcacatttcttaagaaaagttgtccgtgtaattaatgtgtctattttgtgtgttaatattaccaaataatcctttgtttgtatgtgtattaattttgac 34543800  T
Q  408 atttcatatttcaaga 423  Q
     |||||||||||||||    
T  34543801 ttttcatatttcaaga 34543816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 48472591 - 48472472
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||| |||||    
T  48472591 ttaagaaaagttgtcagtgtaattaatgtgtctattttgtgtgttaatattacgaaattatcctttctttgtatgtgtatgaaatttgactttttatatt 48472492  T
Q  418 tcaagacaagttagtagtat 437  Q
    |||||||||| || ||||||    
T  48472491 tcaagacaagataatagtat 48472472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 52198836 - 52198705
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||| || ||||| ||||||||||||||||||||||| |||||||||||||  ||||||    
T  52198836 ttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttctgtgtattaatattaccaaattatcttttatttgtatgtgtattgaatttg 52198737  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| ||||||||| |||||||||||||||    
T  52198736 actttttatatttcaaaacaagttagtagtat 52198705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 306 - 436
Target Start/End: Complemental strand, 28116613 - 28116483
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||| ||||||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  28116613 ttttcacattttttaagaaaagttgttagtgtaattaatatgtctattttgtgtgttaatattgccaaattatcatttgtttgtatgtgtattaaatttg 28116514  T
Q  406 acatttcatatttcaagacaagttagtagta 436  Q
    || ||||||||||||||  || |||||||||    
T  28116513 acttttcatatttcaaggtaaattagtagta 28116483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 5448659 - 5448790
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||| ||| | ||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  5448659 ttttcacatttcttaagaaatgttatcaatataattaatgtgtctgttttgtgtgttaatattacgaaattatcctttgtttgtatgtgtattaaatttg 5448758  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| | |||||||||||    
T  5448759 acttttcatatttcaagatatgttagtagtat 5448790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 38136352 - 38136483
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||   ||||||    
T  38136352 ttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtaattaatttg 38136451  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||||||| ||||||||||||||    
T  38136452 atttttcatatttcaaggcaagttagtagtat 38136483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 306 - 427
Target Start/End: Complemental strand, 39237697 - 39237576
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||||||||| |||||| ||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  39237697 ttttcacattttttaagaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 39237598  T
Q  406 acatttcatatttcaagacaag 427  Q
    || ||| |||||||||||||||    
T  39237597 actttttatatttcaagacaag 39237576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 426
Target Start/End: Original strand, 51787768 - 51787888
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||   | ||||||||||||||||| |||||||    
T  51787768 ttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattacgaaatagacatttgtttgtatgtgtattaaatttg 51787867  T
Q  406 acatttcatatttcaagacaa 426  Q
    || ||||||||||||||||||    
T  51787868 acttttcatatttcaagacaa 51787888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 307 - 437
Target Start/End: Complemental strand, 5416974 - 5416846
Alignment:
Q  307 tttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttga 406  Q
    ||||||| |||||||||||||||||  |||||  ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| ||||||||    
T  5416974 tttcacatttcttaagaaaagttgtttgtgta--taatgtgtctattttgtttgttaatattaccaaattgtgttttgtttgtatgtgtattaaatttga 5416877  T
Q  407 catttcatatttcaagacaagttagtagtat 437  Q
    | ||| ||||||||||| ||||| |||||||    
T  5416876 cttttaatatttcaagataagtttgtagtat 5416846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 19654425 - 19654556
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||  ||| ||||||| ||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||| ||||||     
T  19654425 ttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctattttatgtgttgatattaccaaattatcatttatttgtatgtgtattaaattta 19654524  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
     | ||||||||||||| |||||||||||||||    
T  19654525 tcttttcatatttcaaaacaagttagtagtat 19654556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 20185764 - 20185633
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| ||||||| |||||||    |||||||||||||||||||||||||  ||||||||||||| ||||| |||||||    
T  20185764 ttttcacatttcttaagaaaatttgttagtgtaattaatgtgcaagttttgtgtgttaatattaccaaattgccttttgtttgtatttgtattaaatttg 20185665  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||| ||||||||||    
T  20185664 acttttcatatttcaagacaaattagtagtat 20185633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 52226016 - 52226147
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||| ||||||||| ||| |||||||||| |||| | ||||||||||| |||||| || ||||||| ||||||||| |||||||    
T  52226016 ttttcacattttttaagaaatgttgtcagtataattaatgtgtctgttttatatgttaatattatcaaattgtcctttgtttatatgtgtattaaatttg 52226115  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||||||||||    
T  52226116 acttttcatatttcaagacaagttagtagtat 52226147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 52552607 - 52552488
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||||||||||||||||  ||| |||||  ||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||    
T  52552607 ttaagaaaagttgtcagtgtaataaatttgtctgctttatgtgttaatattaccaaattatcctttgtttgtacgtgtataaaatttgacttttcatatt 52552508  T
Q  418 tcaagacaagttagtagtat 437  Q
    |||||| |||||||||||||    
T  52552507 tcaagataagttagtagtat 52552488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 54438507 - 54438638
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| ||||| || ||| ||| |||||| ||||||||||||||||||| |||||||| ||| ||||||||||||| |||||||    
T  54438507 ttttcacatttcttaagaaaaattgtccgtataattaaagtgtctgttttgtgtgttaatattacgaaattatcctttatttgtatgtgtattaaatttg 54438606  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||| ||||| |||||||||    
T  54438607 acttttcatatttcaaaacaagatagtagtat 54438638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 56373452 - 56373321
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| |||| || |||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||| |||||||    
T  56373452 ttttcacatttcttaagaaaaattgttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttgtttgtctgtgtattaaatttg 56373353  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
       |||||||||||||||||||||| ||||||    
T  56373352 ttttttcatatttcaagacaagttattagtat 56373321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 429
Target Start/End: Original strand, 31486447 - 31486608
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt--cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat 367  Q
    ||||||| || ||||||||| ||||| | |||||| ||||  |||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  31486447 tactccctccgtccctatatgtaagccctttttgctttttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtgttaatat 31486546  T
Q  368 taccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtt 429  Q
    ||| |||||||| ||||||| |||| |||| ||||||||  ||| |||||||||| ||||||    
T  31486547 tactaaattatcctttgtttatatgcgtattaaatttgattttttatatttcaaggcaagtt 31486608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 318 - 427
Target Start/End: Original strand, 46729314 - 46729423
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || | ||||||||||||||| ||||||||| |||||||||    
T  46729314 ttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctatgtttgtatgtgtattaaatttgacttttcatatt 46729413  T
Q  418 tcaagacaag 427  Q
    ||||| ||||    
T  46729414 tcaaggcaag 46729423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 12624693 - 12624821
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| ||||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  12624693 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgactattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttg 12624792  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    || |||  ||||| ||||||| |||||||    
T  12624793 actttttgtattttaagacaaattagtag 12624821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 43509080 - 43509209
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| |||||| |||||| |||||||| | |||||||||||||||||| |||||| |||||||||||||||||||| ||||||     
T  43509080 ttttcacatttcttaagaaacgttgtc-gtgtaattaatgtgt-tgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaattta 43509177  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| |||||||||||| ||||||||||    
T  43509178 acttttcaaatttcaagacaaattagtagtat 43509209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 265 - 433
Target Start/End: Original strand, 26203085 - 26203254
Alignment:
Q  265 taatttactcccaccatccctatatttaagcaccttttgcattttc-acacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgtta 363  Q
    |||| ||||||| || ||||||||| ||||| || ||| | ||||| ||| || |||||||||||||| | ||||| |||||| | |||||| |||||||    
T  26203085 taatatactccctccgtccctatatgtaagccccctttactttttccacatttattaagaaaagttgttactgtaattaatgtatatattttatgtgtta 26203184  T
Q  364 atattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    ||||||| ||||| |||||| ||||||||| ||| ||||||||| |||| ||||||||||||||||||||    
T  26203185 atattacaaaattgtcttttctttgtatgtatattaaatttgacttttcgtatttcaagacaagttagta 26203254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 306 - 430
Target Start/End: Original strand, 22651461 - 22651585
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| || | | ||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  22651461 ttttcacatttcttaagaaaatttattaatgtaattaatgtgtttattttgtatgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttg 22651560  T
Q  406 acatttcatatttcaagacaagtta 430  Q
    || || | | |||||||||||||||    
T  22651561 actttacgtgtttcaagacaagtta 22651585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 39414233 - 39414362
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||||||||||||  | || || |||| |||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||    
T  39414233 ttttcatatttcttaagaaaagttgataatgcaattaatatgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtg--ttaaatttg 39414330  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||||| ||||    
T  39414331 acttttcatatttcaagataagttagtggtat 39414362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 333 - 437
Target Start/End: Original strand, 43800832 - 43800936
Alignment:
Q  333 agtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagt 432  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||| || |||||||||||||||||  |||||||| ||||||||||||||||||||| ||    
T  43800832 agtgtaattaaggtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtatttaatttgacttttcatatttcaagacaagttggt 43800931  T
Q  433 agtat 437  Q
    |||||    
T  43800932 agtat 43800936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 24072764 - 24072895
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||  ||||| || |||| ||| |||||||| |||||||    
T  24072764 tttttacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcatttgcttgaatgtgtattaaatttg 24072863  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| | |||||||    
T  24072864 acttttcatatttcaagacaagatggtagtat 24072895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 270 - 437
Target Start/End: Original strand, 7002142 - 7002311
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttctt-aagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat 367  Q
    ||||||| || ||||||||| ||| | |||||||| |||| |||| ||||| ||||||| |||| | || || |||||| | |||||| |||||||||||    
T  7002142 tactccctccgtccctatatataacccccttttgcttttttcacatttctttaagaaaaattgttaatgcaattaatgtttatattttatgtgttaatat 7002241  T
Q  368 taccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||| ||||||||||||||| | ||||||||  ||||||||||||||| ||||||| |||||    
T  7002242 taccaaattatcctttgtttgtatgtgtgttaaatttgatttttcatatttcaagataagttagcagtat 7002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 306 - 423
Target Start/End: Original strand, 50782775 - 50782892
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||| || ||||||||||||||||| || |||     
T  50782775 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtcttaatattacgaaattgtcctttgtttgtatgtgtattaacttta 50782874  T
Q  406 acatttcatatttcaaga 423  Q
    |  ||| |||||||||||    
T  50782875 attttttatatttcaaga 50782892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 10602340 - 10602187
Alignment:
Q  281 tccctatatttaagcaccttttgcattttcacact-tcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||||| ||||  |||||||  |||||||| | | |||||||||||||  ||||||| |||| ||||||||||||||||||||||||| ||||| ||    
T  10602340 tccctatatgtaagtcccttttgttttttcacattcttttaagaaaagttggtagtgtaattaatttgtctattttgtgtgttaatattactaaattgtc 10602241  T
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||    ||||||| ||||||||| ||||||||||||| |||| ||||||||||    
T  10602240 ttttgtt----tgtgtattaaatttgacttttcatatttcaaaacaaattagtagtat 10602187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 321 - 433
Target Start/End: Complemental strand, 31937485 - 31937373
Alignment:
Q  321 agaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttca 420  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||||||  ||||| || ||||||||||||| ||| ||||||||| ||||||||||||    
T  31937485 agaaaagttgtcactgtaattaatgtgtctgttttgtgtgttaatattattaaattgtcatttgtttgtatgtatataaaatttgacttttcatatttca 31937386  T
Q  421 agacaagttagta 433  Q
    |||  ||||||||    
T  31937385 agattagttagta 31937373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 5536494 - 5536605
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||||||||||| |||||||||| ||||| ||||||||| ||| ||||| || ||||||||||||||||| |||||||    
T  5536494 ttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgcgtgttaatactacgaaattttcatttgtttgtatgtgtattaaatttg 5536593  T
Q  406 acatttcatatt 417  Q
    |  |||||||||    
T  5536594 atttttcatatt 5536605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 13096638 - 13096519
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||| || ||||||| |||||| || ||| || || |||||||||    
T  13096638 ttaagaaaagttgttagtgtaattaatgtgtctgtgttgtgtgttaatattaccaaattgtcatttgtttctatgtgcataaaaattaacttttcatatt 13096539  T
Q  418 tcaagacaagttagtagtat 437  Q
    | ||||||||||| ||||||    
T  13096538 ttaagacaagttactagtat 13096519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 41945880 - 41945754
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||||||||||| |||||||| | |||| |||| ||||||||| ||||| || ||||||||||| ||||| |||||||    
T  41945880 ttttcacattttttaagaaaaattgtcagtgtaattaatgtgt-tgttttatgtgataatattacgaaattgtcctttgtttgtatatgtattaaatttg 41945782  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || ||||||||||||||||||| |||||    
T  41945781 acttttcatatttcaagacaagatagta 41945754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 20293740 - 20293875
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaat----gtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaa 401  Q
    |||||||| ||||||||||||||||||||||||| ||||    |||| |||||| | || |||||||||  |||| |||||||||||||| ||||| |||    
T  20293740 ttttcacatttcttaagaaaagttgtcagtgtaattaattaatgtgtatattttttatgctaatattactgaattgtcttttgtttgtatttgtattaaa 20293839  T
Q  402 tttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||  |||||||||||| |||||||||||||||    
T  20293840 tttgactattcatatttcaatacaagttagtagtat 20293875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 315 - 436
Target Start/End: Original strand, 20791933 - 20792054
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||||||||||||  |||| || |||| |||||||||||||||||||||||||  ||||||||||| ||||||| ||||| ||||||||  ||||||    
T  20791933 ttcttaagaaaagttggtagtgcaattaatatgtctattttgtgtgttaatattacataattatcttttatttgtatatgtattaaatttgagttttcat 20792032  T
Q  415 atttcaagacaagttagtagta 436  Q
    ||||||||  | ||||||||||    
T  20792033 atttcaaggtaggttagtagta 20792054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 3684296 - 3684164
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||  ||||| |||||| ||||||||||||||||||| |||||||||  |||||||| ||||||| ||||| ||| ||||||     
T  3684296 ttttcacatttattaagaaagattgtcggtgtaattaatgtgtctattttgtgtattaatattattaaattatcatttgtttatatgtatattaaattta 3684197  T
Q  406 ac-atttcatatttcaagacaagttagtagtat 437  Q
    ||  ||||||||||||||| |||||||||||||    
T  3684196 acgttttcatatttcaagataagttagtagtat 3684164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 421
Target Start/End: Original strand, 32236843 - 32236943
Alignment:
Q  321 agaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttca 420  Q
    ||||| ||||||||||||| |||| ||||| |||||||||||||||||| ||||||||  ||||||| ||||||||| ||||||||| ||||||||||||    
T  32236843 agaaatgttgtcagtgtaattaatatgtctgttttgtgtgttaatattatcaaattattctttgtttatatgtgtattaaatttgacttttcatatttca 32236942  T
Q  421 a 421  Q
    |    
T  32236943 a 32236943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 39197143 - 39197015
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtcta-ttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaattt 404  Q
    |||| ||| |||||||||||| |||||| | | | ||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  39197143 tttttacatttcttaagaaaaattgtcactatgattaatgtgtcttgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaattt 39197044  T
Q  405 gacatttcatatttcaagacaagttagta 433  Q
    ||| ||||| |||| || |||||||||||    
T  39197043 gacttttcaaattttaaaacaagttagta 39197015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 430
Target Start/End: Complemental strand, 45628170 - 45628059
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||| ||||||| | |||||||| |||||||| ||||||||||||||||  | ||| ||| ||||||||| ||||||||| |||||||||    
T  45628170 ttaagaaaagttgttagtgtaattgatgtgtctgttttgtgtattaatattaccaaattgccctttattt-tatgtgtattaaatttgacttttcatatt 45628072  T
Q  418 tcaagacaagtta 430  Q
    |||||||||||||    
T  45628071 tcaagacaagtta 45628059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 433
Target Start/End: Original strand, 5932895 - 5933010
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||||||| |||||| || ||||||| ||||||||| |||||| |  |||   |||    
T  5932895 ttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcatttgtttttatgtgtattaaatttaatttttttaatt 5932994  T
Q  418 tcaagacaagttagta 433  Q
    ||||||||||||||||    
T  5932995 tcaagacaagttagta 5933010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 21171765 - 21171852
Alignment:
Q  350 tattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||||| || |||||||||||| |||||||||||||    
T  21171765 tattttgtgggttaatattatcaaattatcttttatttgtatgtgtattaaatttgactttacatatttcaagataagttagtagtat 21171852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 299 - 437
Target Start/End: Complemental strand, 10541372 - 10541234
Alignment:
Q  299 ttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatc 398  Q
    |||| |||||| ||| |||| |||||||||||| | || || |||||| | |||||||||| ||||||||||||||||||| |||||||  ||||||||     
T  10541372 ttttacatttttacatttctaaagaaaagttgttaatgcaattaatgtatatattttgtgtattaatattaccaaattatcctttgtttaaatgtgtatt 10541273  T
Q  399 aaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||| ||| |||| |||||| | |||||||||||    
T  10541272 aaatttgactttttatatgtcaagatatgttagtagtat 10541234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 285 - 425
Target Start/End: Original strand, 31840073 - 31840212
Alignment:
Q  285 tatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatctttt 383  Q
    ||||| ||| ||||||||| ||||| || | |||||||||||| |||| ||||||| |||||| | |  |||||||||||||||||||||||| || |||    
T  31840073 tatatctaaacaccttttgtatttttcaaatttcttaagaaaaattgttagtgtaattaatgtattt--tttgtgtgttaatattaccaaattgtcattt 31840170  T
Q  384 gtttgtatgtgtatcaaatttgacatttcatatttcaagaca 425  Q
    |||||||||||||| ||||||| | ||| |||||||||||||    
T  31840171 gtttgtatgtgtattaaatttgtctttttatatttcaagaca 31840212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 20116461 - 20116578
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||||| ||||| |||||   || ||||||||||||||||||  ||||| || ||||||||||||||||| ||||||||  |||||||||    
T  20116461 ttaagaaaagttgtcaatgtaattaatgc--ctgttttgtgtgttaatattaggaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatt 20116558  T
Q  418 tcaagacaagttagtagtat 437  Q
    |||||||||| || ||||||    
T  20116559 tcaagacaagataatagtat 20116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 41459619 - 41459715
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||| | |||||| ||||||||||| ||||| |||||| ||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  41459619 taatgtgtcgagtttgtgcgttaatattactaaattgtcttttatttatatgtgtattaaatttgacttttcatatttcatgacaagttagtagtat 41459715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 324 - 437
Target Start/End: Original strand, 5167994 - 5168107
Alignment:
Q  324 aaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaaga 423  Q
    |||||| || |||||| |||| ||||| ||||||| ||||||||||| ||||| || ||||||||||||||||| |||||| |  ||||||||||||| |    
T  5167994 aaagttttcggtgtaattaatatgtctgttttgtgcgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaatttttcatatttcaata 5168093  T
Q  424 caagttagtagtat 437  Q
    |||| |||||||||    
T  5168094 caagctagtagtat 5168107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 54701395 - 54701271
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||||||||| |||| ||| | ||| |||||||| |||   |||||| || ||| ||||||||||||| ||||||     
T  54701395 ttttcacattttttaagaaaagttgtcagtgtaattaatatgtttgtttagtgtgttattat---caaattgtcatttatttgtatgtgtattaaattta 54701299  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || ||||||||||||||| |||||||||    
T  54701298 acttttcatatttcaagataagttagta 54701271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 3094179 - 3094263
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgta 390  Q
    |||| ||| ||||||||||||||||| |  |||| |||||||||||||||||||||||||||||||||||| || ||||||||||    
T  3094179 ttttgacatttcttaagaaaagttgttaaagtaattaatgtgtctattttgtgtgttaatattaccaaattgtcatttgtttgta 3094263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 426
Target Start/End: Complemental strand, 26186819 - 26186743
Alignment:
Q  350 tattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaa 426  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  26186819 tattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgactttttatatttcaagacaa 26186743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 430
Target Start/End: Complemental strand, 51918725 - 51918640
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||||    ||| ||||||||| ||||||||||||||||||||||    
T  51918725 taatgtgtctattttgtgtgttagtattaccaaattattctttgtttgta----tattaaatttgacttttcatatttcaagacaagtta 51918640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 40411409 - 40411330
Alignment:
Q  348 tctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaag 427  Q
    ||||||||||||||||||||||  ||||| || ||||||||||||||||| |||||| || |||||||||||||||||||    
T  40411409 tctattttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaatttaacttttcatatttcaagacaag 40411330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 20016522 - 20016646
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||| || || |||| || ||||||  ||||||||| |||||||||||||||||| || ||||||||||  ||||| |||||||    
T  20016522 ttttcacattttttaagaaaggtagttagtgcaattaatgt--ctattttgtatgttaatattaccaaattttcctttgtttgta--tgtattaaatttg 20016617  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    |  || |||||||||||||||||||||||    
T  20016618 agtttacatatttcaagacaagttagtag 20016646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 315 - 437
Target Start/End: Original strand, 54359690 - 54359811
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaata---ttaccaaattatcttttgtttgtatgtgtatcaaatttgacattt 411  Q
    ||||||||||||||||||||| ||| |||||||||| |||| ||||||||||   |||| ||||| |    | ||||||||||||| |||||| || |||    
T  54359690 ttcttaagaaaagttgtcagtataattaatgtgtctgttttatgtgttaataatattacgaaattgt----tctttgtatgtgtattaaatttaactttt 54359785  T
Q  412 catatttcaagacaagttagtagtat 437  Q
    |||||||||||||||| |||||||||    
T  54359786 catatttcaagacaagatagtagtat 54359811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 52768972 - 52768880
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    ||||||||||||||||||||| |||||||| ||||| || ||| ||||||||||||| ||||||||| || || ||||||||| ||| |||||    
T  52768972 taatgtgtctattttgtgtgtgaatattacaaaattgtcatttatttgtatgtgtattaaatttgactttacagatttcaagagaagatagta 52768880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 52977554 - 52977684
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||| | || || | ||||||||||||| |||||||||||||  ||| ||| |||| ||||||||||||   ||||||    
T  52977554 ttttcaca-ttcttaaaaaaagttgttaatgcaattcatgtgtctattttatgtgttaatattattaaactattttttatttgtatgtgtacttaatttg 52977652  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || | | ||||||||| | |||||||||||||    
T  52977653 acttcttatatttcaaaataagttagtagtat 52977684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 437
Target Start/End: Complemental strand, 44812698 - 44812584
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaag 422  Q
    ||||||| || |||||| |||||| | | |||| | |||||||||||| ||||| || ||| ||||| ||||||| ||||||||| |||||||||||||     
T  44812698 aaaagttatcggtgtaattaatgtatttgttttatatgttaatattacaaaattgtcatttatttgtgtgtgtattaaatttgacttttcatatttcaaa 44812599  T
Q  423 acaagttagtagtat 437  Q
    ||||  |||||||||    
T  44812598 acaaaatagtagtat 44812584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 423
Target Start/End: Complemental strand, 45079919 - 45079804
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||| || |||| || |||  | |||||||||||||||||||||| ||||||||  ||| ||| ||  ||||| |||||||    
T  45079919 ttttcacatttcttaagaaaagtagttagtgcaattaacatatctattttgtgtgttaatattagcaaattattctttctttcta--tgtattaaatttg 45079822  T
Q  406 acatttcatatttcaaga 423  Q
     | |||||||||||||||    
T  45079821 gcttttcatatttcaaga 45079804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 437
Target Start/End: Original strand, 21121019 - 21121095
Alignment:
Q  361 ttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||| |||| | ||||||||||||||| |||| |||||| || ||| |||||| ||||||||||||||||||    
T  21121019 ttaatattatcaaactgtcttttgtttgtatgcgtattaaatttaactttttatattttaagacaagttagtagtat 21121095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 34643436 - 34643522
Alignment:
Q  350 tattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| |||||||||||  ||||| ||||| |||||||||||||| |||||| |  ||||||||||||||| || ||||||||||    
T  34643436 tattttgtatgttaatattaataaattgtcttt-gtttgtatgtgtattaaatttaatttttcatatttcaagataaattagtagtat 34643522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 20540029 - 20540098
Alignment:
Q  367 ttaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||| |  ||||||||||||||||| ||||||||| |||||||||| || |||||||| ||||||    
T  20540029 ttaccaaattgttctttgtttgtatgtgtattaaatttgac-tttcatattttaatacaagttactagtat 20540098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 56217108 - 56217030
Alignment:
Q  359 tgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||| |||||| | ||| || ||||||||||| ||||| |||||| || ||||||||||||||| ||| |||||||||    
T  56217108 tgttagtattacgatattgtcctttgtttgtatttgtattaaatttaacttttcatatttcaagataagatagtagtat 56217030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 31917448 - 31917505
Alignment:
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||| ||||||||| ||| |||||| |||| ||| |||||||||    
T  31917448 ttttgtttgtatgtgtattaaatttgactttttatattttaagataagatagtagtat 31917505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 418
Target Start/End: Complemental strand, 36513367 - 36513306
Alignment:
Q  357 tgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatattt 418  Q
    ||||||||||||| |||||| | |||||||||||| ||||| ||||||||  ||||||||||    
T  36513367 tgtgttaatattatcaaattgttttttgtttgtatatgtattaaatttgatttttcatattt 36513306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 726666 - 726726
Alignment:
Q  371 caaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttag 431  Q
    ||||||||| ||||||||||||||    ||||||||| ||||||||||||||| |||||||    
T  726666 caaattatcctttgtttgtatgtgggataaatttgacttttcatatttcaagataagttag 726726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 754178 - 754118
Alignment:
Q  371 caaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttag 431  Q
    ||||||||| ||||||||||||||    ||||||||| ||||||||||||||| |||||||    
T  754178 caaattatcctttgtttgtatgtgggataaatttgacttttcatatttcaagataagttag 754118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 3113446 - 3113494
Alignment:
Q  389 tatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||| ||||||||| ||||||||||||| |||| ||||||||||    
T  3113446 tatgtgtattaaatttgacttttcatatttcaaaacaaattagtagtat 3113494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 18683632 - 18683536
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttca 413  Q
    ||||||| ||||||||| | |  || |||||||| ||||||||| |||||||||||||| || || ||||||||  | ||||| ||||||||| |||||    
T  18683632 ttcttaaaaaaagttgttaatacaattaatgtgtttattttgtgcgttaatattaccaacttgtcctttgtttg--tttgtattaaatttgacttttca 18683536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 30866699 - 30866782
Alignment:
Q  352 ttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagt 435  Q
    |||||| || || ||||| |||||| |  ||||||||||||||||| || |||||| ||| || ||||||||||||||| ||||    
T  30866699 ttttgtatgctattattaacaaattgttatttgtttgtatgtgtattaattttgactttttatttttcaagacaagttattagt 30866782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 26170309 - 26170251
Alignment:
Q  372 aaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||| || ||| ||||||| ||||| ||||||||| ||||||||||||||| ||||||    
T  26170309 aaattgtcatttatttgtatatgtattaaatttgacttttcatatttcaagataagtta 26170251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 42169222 - 42169280
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    |||| |||||||| |||||||| |||||||| |||||||||||| ||| |||| |||||    
T  42169222 ttaaaaaaagttgacagtgtaattaatgtgtatattttgtgtgtgaatgttactaaatt 42169280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 3094409 - 3094458
Alignment:
Q  388 gtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||| |||||| || |||||||||||||||||| ||| ||||||    
T  3094409 gtatgtgtattaaatttaacttttcatatttcaagacaacttaatagtat 3094458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 30049428 - 30049481
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgt 359  Q
    |||||||| || |||||||||||  | ||||||| |||||||||||||||||||    
T  30049428 ttttcacattttttaagaaaagtgattagtgtaattaatgtgtctattttgtgt 30049481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 30049769 - 30049814
Alignment:
Q  381 tttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaa 426  Q
    |||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  30049769 tttgttagtatgtgtattaaagttgacttttcatatttcaagacaa 30049814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 417
Target Start/End: Original strand, 31294155 - 31294264
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    ||||||||| |||||||||||||  |||||   | ||||||||| ||||||||| ||| |||| | ||| |  |||||||||||||| ||   |||||||    
T  31294155 ttcacacttattaagaaaagttgatagtgttgttcatgtgtctagtttgtgtgtaaattttactacattgttatttgtttgtatgtgaatttgatttgac 31294254  T
Q  408 atttcatatt 417  Q
     |||||||||    
T  31294255 ttttcatatt 31294264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 32866477 - 32866542
Alignment:
Q  283 cctatatttaagcaccttttgcattt-tcacacttcttaagaaaagttgtcagtgtaactaatgtg 347  Q
    ||||||| ||||  || ||||||||| ||||| |||||||||||||||||| |||||| |||||||    
T  32866477 cctatatgtaagtcccctttgcatttctcacatttcttaagaaaagttgtcggtgtaattaatgtg 32866542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 2021 - 1890
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  2021 ttttcacatttcttaagataagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatttg 1922  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||| |||||||| ||||||||||    
T  1921 acttttcatattgcaagacaaattagtagtat 1890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 6e-47; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 25198286 - 25198417
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  25198286 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtataaaatttg 25198385  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||||||||||    
T  25198386 acttttcatatttcaagataagttagtagtat 25198417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 14577761 - 14577630
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| |  ||||||||||||||||| |||||||    
T  14577761 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtttgttaatattaccaaattgtactttgtttgtatgtgtattaaatttg 14577662  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||||||||||||||||||||||    
T  14577661 atttttcatatttcaagacaagttagtagtat 14577630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 25185027 - 25185158
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  25185027 ttttcacatttcttaagaaaagttgtcagtgtaactaatgtgtctgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttg 25185126  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
     | ||||||||||||||| ||| |||||||||    
T  25185127 tcttttcatatttcaagataagatagtagtat 25185158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 26878837 - 26878706
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||||    
T  26878837 ttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtatattaaatttg 26878738  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || || |||||||||||| |||||||||||||    
T  26878737 actttacatatttcaagataagttagtagtat 26878706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 301 - 437
Target Start/End: Original strand, 41086966 - 41087102
Alignment:
Q  301 ttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaa 400  Q
    |||| |||||||| |||||||||||  |||||||||||| ||||||||||  ||||||||||||||||| |||||| || ||||||||||||||||| ||    
T  41086966 ttgccttttcacatttcttaagaaatattgtcagtgtaattaatgtgtctgatttgtgtgttaatattatcaaattttcctttgtttgtatgtgtattaa 41087065  T
Q  401 atttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||  |||||||||||||||||||||||||||||    
T  41087066 atttgatttttcatatttcaagacaagttagtagtat 41087102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 24512276 - 24512145
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||||||||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  24512276 ttttcacattttttaagaaaatttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttg 24512177  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| ||  |||||||||    
T  24512176 acttttcatatttcaagataaaatagtagtat 24512145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 270 - 437
Target Start/End: Original strand, 36437461 - 36437629
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcattttc-acacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||| ||| ||||| |  ||||| ||||| ||| || |||||||||  ||| |||| || |||||||||||||||||||||||| |||    
T  36437461 tactccctccgtccctctatataagctctctttgccttttccacattttttaagaaaaaatgttagtgcaattaatgtgtctattttgtgtgttaacatt 36437560  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  36437561 accaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagtat 36437629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 270 - 437
Target Start/End: Original strand, 45203719 - 45203886
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcattttc-acacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| |||||||| ||| |||||||| ||||||||||  ||| |||||||||||  || | |||| || ||||||||||||||||| ||||||||||    
T  45203719 tactccctccatccctgtatgtaagcaccctttgcattttttacatttcttaagaaatttttt-agtgcaattaatgtgtctattttgtatgttaatatt 45203817  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||| || || |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  45203818 accaacttgtcctttgtttgtatgcgtattaaatttgacttttcatatttcaagacaagttagtagtat 45203886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 57297 - 57166
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||| |  ||| ||||||||||||| |||||||    
T  57297 ttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgttctttatttgtatgtgtattaaatttg 57198  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| || ||||||    
T  57197 acttttcatatttcaagacaagataatagtat 57166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 14847030 - 14846899
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||||||||| |||||| ||||||||||  |||||| ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  14847030 ttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgctttgtgcgttaatattaccatattgtcttttgtttgtatgtgtattaaatttg 14846931  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| |||||||||||||||||||| ||||    
T  14846930 actttttatatttcaagacaagttagtggtat 14846899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 31746514 - 31746387
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| |||| || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  31746514 ttttcacatttcttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttg 31746415  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || |||||||||||||  ||||||||||    
T  31746414 acttttcatatttcaaagcaagttagta 31746387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 38761455 - 38761336
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||||||  ||||| || ||||||||||||||||| ||||||||| |||||||||    
T  38761455 ttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatt 38761356  T
Q  418 tcaagacaagttagtagtat 437  Q
    |||||||||| |||||||||    
T  38761355 tcaagacaagatagtagtat 38761336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 306 - 427
Target Start/End: Original strand, 37956118 - 37956239
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || || || ||||||||||||| ||| | |||||    
T  37956118 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaatttgtcctttgtttgtatgtatattagatttg 37956217  T
Q  406 acatttcatatttcaagacaag 427  Q
    || |||||||||||||||||||    
T  37956218 acttttcatatttcaagacaag 37956239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 306 - 427
Target Start/End: Complemental strand, 38770296 - 38770175
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||| || ||||    
T  38770296 ttttcatatttcttaagataagttgtcagtgtaattaatgtgtttattttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaattttg 38770197  T
Q  406 acatttcatatttcaagacaag 427  Q
    || |||||||||||||||||||    
T  38770196 acttttcatatttcaagacaag 38770175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 40517740 - 40517868
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||||||||||| ||||   |||||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  40517740 ttttcacattttttaagaaaagttgtcagagtaa---atgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttg 40517836  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| | |||||||||||||||||||||||    
T  40517837 actttttaaatttcaagacaagttagtagtat 40517868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 43980692 - 43980564
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  43980692 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcatttgtttgtatgtgtattaaatttg 43980593  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    || |||  |||||||||| || |||||||    
T  43980592 actttttgtatttcaagataaattagtag 43980564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 37141707 - 37141854
Alignment:
Q  291 taagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgt 389  Q
    ||||||||| ||||||||| |||| || |||| ||||||||||||||||| |||||| ||| ||||||||||||||||||| ||||| || |||||||||    
T  37141707 taagcacctattgcatttttcacattttttaaaaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcatttgtttgt 37141806  T
Q  390 atgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| ||||||||| |||| ||||||||| |||| ||| |||||    
T  37141807 atgtgtattaaatttgacttttcgtatttcaagtcaagatagaagtat 37141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 37600997 - 37600870
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||| ||||| ||| ||| ||||||||||  ||| |||||||||| | |||||||||||||||||||||||||||| |||||||    
T  37600997 ttttcacattttttaagaaatgttgtaagtataattaatgtgtctgatttatgtgttaatactgccaaattatcttttgtttgtatgtgtattaaatttg 37600898  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || |||||||||||||||||||||||||    
T  37600897 acttttcatatttcaagacaagttagta 37600870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 323 - 433
Target Start/End: Original strand, 12762856 - 12762966
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaag 422  Q
    ||||||||| | || || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||| ||||||||||||||    
T  12762856 aaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaag 12762955  T
Q  423 acaagttagta 433  Q
    |||||||||||    
T  12762956 acaagttagta 12762966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 427
Target Start/End: Complemental strand, 12998839 - 12998681
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttg-cattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| ||||| ||||||||||||    |||| | |||||||| |||||||||||||||||||||  || |||||||  |||||||||||| ||||||    
T  12998839 tactccctccatctctatatttaagctttctttgtctttttcacatttcttaagaaaagttgtcagttcaattaatgtgcatattttgtgtgtgaatatt 12998740  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaag 427  Q
    || ||||| || ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  12998739 actaaattgtcctttgtttgtatgtgtattaaatttgacctttcatatttcaagacaag 12998681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 39543772 - 39543641
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatta---ccaaattatcttttgtttgtatgtgtatcaaat 402  Q
    |||||| | ||||||||||| |||||| |||||| |||||||||| ||||||| ||||||||||   ||||||| |||||||||||||||||||| ||||    
T  39543772 ttttcatatttcttaagaaatgttgtccgtgtaattaatgtgtctgttttgtgcgttaatattattaccaaattgtcttttgtttgtatgtgtattaaat 39543673  T
Q  403 ttgacatttcatatttcaagacaagttagtag 434  Q
    ||||| |||||||| |||||||||||||||||    
T  39543672 ttgacttttcatatctcaagacaagttagtag 39543641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 2562839 - 2562707
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||  ||||||||||| |||||||||| |||||| |||||||||||| ||||| || ||||||||||||||||| |||||||    
T  2562839 ttttcacatttcttaagaaaaactgtcagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 2562740  T
Q  406 acatttcatatttc-aagacaagttagtagtat 437  Q
    || ||||||||| | |||||||| |||||||||    
T  2562739 acttttcatattactaagacaagatagtagtat 2562707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 24962474 - 24962346
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||     
T  24962474 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaattta 24962375  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    || |||  ||||||||||||| |||||||    
T  24962374 actttttgtatttcaagacaaattagtag 24962346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 38773458 - 38773326
Alignment:
Q  306 ttttcacacttcttaagaaaa-gttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaattt 404  Q
    |||||||| ||||||| |||| |||||||||| || |||||||||| ||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||    
T  38773458 ttttcacatttcttaaaaaaaagttgtcagtgcaattaatgtgtctgttttgtgtgttaacattacgaaattgtcttttgtttgtatgtgtatgaaattt 38773359  T
Q  405 gacatttcatatttcaagacaagttagtagtat 437  Q
    ||  ||||||||||||||||||| | |||||||    
T  38773358 gatttttcatatttcaagacaagatggtagtat 38773326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 7172216 - 7172347
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| || |  |||||| |||||||||||||||||||||||||||||  ||||| || |||||||||||||| || ||| |||    
T  7172216 ttttcacatttcttaagaaaactttttggtgtaattaatgtgtctattttgtgtgttaatattataaaattgtcatttgtttgtatgtgcattaaaattg 7172315  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||||||||||    
T  7172316 acttttcatatttcaagataagttagtagtat 7172347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 34882667 - 34882798
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||| | || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||    
T  34882667 ttttcacattttttaagaaaaattgttaatgcaattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtgttaaatttg 34882766  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||| |||| || ||||| ||||    
T  34882767 acttttcatattttaagataaattagtcgtat 34882798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 38203101 - 38202970
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| |||||||||| |||||| |||| ||| | ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  38203101 ttttcacatttcttaataaaagttgtcggtgtaattaatatgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttg 38203002  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||||||||||||||||| | |||||||    
T  38203001 atttttcatatttcaagacaagatggtagtat 38202970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 40790786 - 40790916
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||| ||| |||| |||||||||||||||| || ||||||||||| ||||  |||||||    
T  40790786 ttttcacatttcttaagaaaagttgtcagtgtaattaatgcgtctgttt-gtgtattaatattaccaaattgtcatttgtttgtatatgtaataaatttg 40790884  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    ||  ||||||||||||||||| ||||||||||    
T  40790885 actattcatatttcaagacaacttagtagtat 40790916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 14739438 - 14739552
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||||||| ||||||||| ||||||| |||| ||||  ||||||||    
T  14739438 ttaagaaaagttgtccgtgtaattaatgtgtttattttatatgttaatattaccaaattatcctttgtttgtgtgtgtattaaatgtgactattcatatt 14739537  T
Q  418 tcaagacaagttagt 432  Q
    |||||||||||||||    
T  14739538 tcaagacaagttagt 14739552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 336 - 433
Target Start/End: Complemental strand, 36309675 - 36309578
Alignment:
Q  336 gtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  36309675 gtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttagta 36309578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 24276664 - 24276539
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||| ||| ||| |||||||||||||  ||||||||||||||||||||| || ||||||||||||||||| ||||||     
T  24276664 ttttcacatttcttaaaaaaagttgttagtataattaatgtgtctatt--gtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttt 24276567  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || || |||||||||| |||||||||||    
T  24276566 actttacatatttcaaaacaagttagta 24276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 31673594 - 31673725
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||||||||  |||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  31673594 ttttcacattttttaagaaaagttgtg-gtgtaattaatgtgtttattttgtatgttaatattaccaaattatcctttgtttgtatgtgtattaaatttg 31673692  T
Q  406 acatttcatatttcaa-gacaagttagtagtat 437  Q
    ||  |||| ||||||| |||| |||||||||||    
T  31673693 actattcaaatttcaatgacaggttagtagtat 31673725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 885459 - 885589
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||||||||| || | ||||| ||| |||||||||||||| |||||| || ||||||||||||||||| |||||||    
T  885459 ttttcacatttattaagaaaagttgtcagtgtaattattatgtctgttt-gtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaatttg 885557  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| |||||||||||| ||||| ||||    
T  885558 acttttcaaatttcaagacaaattagtggtat 885589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 16002832 - 16002701
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||||||||| |||||| |||||||||  ||||||||||||||||||  |||||||| ||||||||||| ||||| |||||||    
T  16002832 ttttcacattttttaagaaaagttgtctgtgtaattaatgtgtcagttttgtgtgttaatattaagaaattatcctttgtttgtatttgtattaaatttg 16002733  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| ||||||||| ||||| || ||||||    
T  16002732 actttttatatttcaaaacaagataatagtat 16002701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 433
Target Start/End: Original strand, 25888592 - 25888719
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||| || ||| || ||||||||||||||||| |||||||    
T  25888592 tttttacatttcttaagaaaagttgttagtgtaattaatatgtctattttgtatgttaatattatcatattgtcatttgtttgtatgtgtattaaatttg 25888691  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    |  |||||||||| ||||||| ||||||    
T  25888692 atttttcatattttaagacaaattagta 25888719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 30262635 - 30262516
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||| ||||||||| |||| || ||||||||||||||||| |||||||||||||||||| || ||||||||||||||| | |||| | || ||||| |||    
T  30262635 ttaaaaaaagttgttagtgcaattaatgtgtctattttgtatgttaatattaccaaattgtcatttgtttgtatgtgtcttaaatctaacttttcaaatt 30262536  T
Q  418 tcaagacaagttagtagtat 437  Q
    ||||||||||||||||||||    
T  30262535 tcaagacaagttagtagtat 30262516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 31252763 - 31252633
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| |||| || ||||||||| |||||||||| ||||||||||||||||||| |||| | | |||||||| |||||||| |||||||    
T  31252763 ttttcacatttcttaaaaaaa-ttatcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaataaacatttgtttgcatgtgtattaaatttg 31252665  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||| |||||||| |||||||||    
T  31252664 acttttcatattttaagacaagatagtagtat 31252633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 291 - 436
Target Start/End: Complemental strand, 5191673 - 5191528
Alignment:
Q  291 taagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgt 389  Q
    |||||| |||||||||||| |||| |||||||||||| |||| || | || |||||||||| ||||||||||||||||||||||||| ||  |||||| |    
T  5191673 taagcatcttttgcatttttcacatttcttaagaaaaattgttag-gcaattaatgtgtctgttttgtgtgttaatattaccaaattgtccattgtttat 5191575  T
Q  390 atgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    |||||||| ||||||||  |||||||||||||||||| |||| ||||    
T  5191574 atgtgtattaaatttgatttttcatatttcaagacaatttagcagta 5191528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 7772521 - 7772626
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||| || ||| ||||||||||||| |||||| || |||||||||    
T  7772521 ttaagaaaagttgtcattgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttatttgtatgtgtattaaatttcacttttcatatt 7772620  T
Q  418 tcaaga 423  Q
    ||||||    
T  7772621 tcaaga 7772626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 1177264 - 1177134
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||| | ||||||| |||||||||| |||||| | |||||||||| ||||| |||||| ||||||||||||| |||||||    
T  1177264 ttttcacattttttaagaaaagttat-agtgtaattaatgtgtctgttttgtatattaatattacgaaattgtcttttatttgtatgtgtattaaatttg 1177166  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||||||||||| ||||| |||||||||    
T  1177165 atttttcatatttcaaaacaagatagtagtat 1177134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 429
Target Start/End: Complemental strand, 3113642 - 3113519
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| |||| || ||||||||| |||| ||||| |||||||||||||||||| |||||| |||||||||| ||||||||| ||||||     
T  3113642 ttttcacatttcttaaaaaaaattatcagtgtaattaatatgtctgttttgtgtgttaatattatcaaattgtcttttgtttatatgtgtattaaattta 3113543  T
Q  406 acatttcatatttcaagacaagtt 429  Q
    |  ||||||||||||||| |||||    
T  3113542 atttttcatatttcaagataagtt 3113519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 22590372 - 22590503
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| |||| || ||||||||||||||| ||||||||||| |||||||| ||  ||||||||||  || | |||||||    
T  22590372 ttttcacatttcttaagaaaatttgttagtgcaattaatgtgtctattttttgtgttaatatcaccaaattgtccattgtttgtataagtgttaaatttg 22590471  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||| ||||| |||||||||||||    
T  22590472 acttttcatattgcaagataagttagtagtat 22590503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 40337300 - 40337169
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||| |||||||| ||||| ||| |||||||| | |||||| |||||||||||| ||||| || |||||||||||||||||  || |||    
T  40337300 ttttcacatttcttatgaaaagttatcagtataattaatgtgtatgttttgtatgttaatattacaaaattgtcctttgtttgtatgtgtatttaaattg 40337201  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| || ||||||    
T  40337200 acttttcatatttcaagacaagataatagtat 40337169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 45185376 - 45185245
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||  |||||  ||||||||| |||| ||| ||||||||| |||||| || |||||||||||||||||  | ||||    
T  45185376 ttttcacatttcttaagaaaagttgtcgttgtaataaatgtgtctgttttatgtattaatattatcaaattgtcctttgtttgtatgtgtattcattttg 45185277  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| |||| ||||||||||||||||||    
T  45185276 acttttcaaattttaagacaagttagtagtat 45185245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 427
Target Start/End: Complemental strand, 10396337 - 10396218
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||||| ||||| |||||| | |  |||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  10396337 ttttcacatttattaagaaaagttgtcaatgtaattaatgtttgt--tttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttg 10396240  T
Q  406 acatttcatatttcaagacaag 427  Q
    || |||| ||||||||||||||    
T  10396239 acttttcgtatttcaagacaag 10396218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 416
Target Start/End: Original strand, 17933701 - 17933812
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgtt-aatattaccaaattatcttttgtttgtatgtgtatcaaattt 404  Q
    |||||||| ||| |||||||| |||||  ||||| |||||||||||||||||||||| |||||||||||| | || ||||||||||||||||| ||||||    
T  17933701 ttttcacatttcgtaagaaaaattgtcgatgtaattaatgtgtctattttgtgtgttaaatattaccaaactgtcatttgtttgtatgtgtattaaattt 17933800  T
Q  405 gacatttcatat 416  Q
    ||| ||||||||    
T  17933801 gacttttcatat 17933812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 40602150 - 40602023
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || || ||||||||| | |||| || ||||||||||  ||| |||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  40602150 ttttcacattttttcagaaaagttattagtgcaattaatgtgtcttatttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaatttg 40602051  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    |  |||||||||||||  ||||||||||    
T  40602050 atttttcatatttcaatgcaagttagta 40602023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 426
Target Start/End: Original strand, 44255435 - 44255570
Alignment:
Q  291 taagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgta 390  Q
    ||||| || ||||| |||||||| || |||||||||| ||| || |||| ||||||| || |||||||||||||||||| |||||| || ||||||||||    
T  44255435 taagctccctttgctttttcacatttgttaagaaaagatgtgagcgtaattaatgtgccttttttgtgtgttaatattatcaaattgtcatttgtttgta 44255534  T
Q  391 tgtgtatcaaatttgacatttcatatttcaagacaa 426  Q
     |||||| ||||||||| ||| |||||| |||||||    
T  44255535 cgtgtattaaatttgactttttatatttaaagacaa 44255570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 45183961 - 45183842
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    |||||||||||||||||||  ||||  ||| ||| | |||| |||||||||||||||||||| || ||||||| ||||||||| ||||||||| |||||     
T  45183961 ttcttaagaaaagttgtcatagtaataaatatgtttgttttatgtgttaatattaccaaattgtcctttgtttatatgtgtattaaatttgacttttcaa 45183862  T
Q  415 atttcaagacaagttagtag 434  Q
    |||| |||||||||||||||    
T  45183861 atttgaagacaagttagtag 45183842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 43191551 - 43191458
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    ||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||| |||||| |  ||||||||||||||| ||||||||||    
T  43191551 taatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaaattttcatatttcaagataagttagtag 43191458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 1769556 - 1769426
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||| ||| ||||||||| ||||||     |||||| |||||||||||||| ||| || |||||||||||||| || |||||||    
T  1769556 ttttcacattttttaagaaatgttatcagtgtaattaatgtactccttttgtatgttaatattaccacattgtcatttgtttgtatgtg-attaaatttg 1769458  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| |||||||||||||||||||||||||    
T  1769457 actttttatatttcaagacaagttagtagtat 1769426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 34869839 - 34869940
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| ||||| ||||||||||||||| |||||||||| ||||||||| |||||| || ||||||| | |||| || ||||||||| |||||||||    
T  34869839 ttaagaaaaattgtcggtgtaactaatgtgtatattttgtgtattaatattatcaaattgtcatttgtttatctgtgcataaaatttgacttttcatatt 34869938  T
Q  418 tc 419  Q
    ||    
T  34869939 tc 34869940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 419
Target Start/End: Complemental strand, 3006881 - 3006777
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||||||||||||| ||| ||| |||| |||||||||| |||||||||||||| |||||||| ||| | ||||||||||| ||| ||||| ||| ||    
T  3006881 ttcttaagaaaagttgttagtataattaatatgtctattttatgtgttaatattactaaattatcatttatctgtatgtgtattaaaattgactttttat 3006782  T
Q  415 atttc 419  Q
    |||||    
T  3006781 atttc 3006777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 23399835 - 23399755
Alignment:
Q  357 tgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||| ||||| || ||||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||    
T  23399835 tgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaaccaagttagtagtat 23399755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 35794771 - 35794851
Alignment:
Q  338 aactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatattt 418  Q
    ||||| |||||||||||||||| ||||||||| |||||| || ||||||||||||||||| ||||||||| ||||||||||    
T  35794771 aactattgtgtctattttgtgtattaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattt 35794851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 404
Target Start/End: Complemental strand, 16644145 - 16644047
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaattt 404  Q
    |||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||||||| || ||||| |  ||||| ||||||||| | ||||||    
T  16644145 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtatattttgtgtgttaatatcactaaattgttctttgtctgtatgtgtgttaaattt 16644047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 34157951 - 34158042
Alignment:
Q  343 atgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    ||||||||||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||| | |||  ||||| ||||||| |||||||    
T  34157951 atgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttggctttttgtattttaagacaaattagtag 34158042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 14522713 - 14522643
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| | |||||||||||||||||||||||||    
T  14522713 ttttcacatttcttaagaaaaattgttagtgtaattaatgtgtatgttttgtgtgttaatattaccaaatt 14522643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 14906598 - 14906683
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtat 391  Q
    |||||||| || || | ||||||| | | ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  14906598 ttttcacattttttcataaaagttattaatgtaattaatatgtctattttgtgtgttaatattaccaaattatcctttgtttgtat 14906683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 23280699 - 23280779
Alignment:
Q  357 tgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||| ||||| || ||||||||||||| ||| ||||||||  ||||||||| |||| ||||||||||||||    
T  23280699 tgtgttaatattactaaattgtcctttgtttgtatgtttattaaatttgatttttcatattacaagccaagttagtagtat 23280779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 437
Target Start/End: Complemental strand, 35709183 - 35709077
Alignment:
Q  331 tcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||||||  ||||||||||| ||| ||||||||||||| |||||| ||||| || | | ||||||| ||||||||| |||||||| | ||||  |||||    
T  35709183 tcagtgtagttaatgtgtctagtttatgtgttaatattatcaaattgtctttcgtatatgtgtgtattaaatttgacttttcatatgttaagattagtta 35709084  T
Q  431 gtagtat 437  Q
    |||||||    
T  35709083 gtagtat 35709077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 418
Target Start/End: Original strand, 41541550 - 41541656
Alignment:
Q  310 cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacat 409  Q
    |||| |||||||||||| | || |||  |||||||||||||||||||||||| ||||||| |||||| || ||| ||  ||| ||||| ||||||||| |    
T  41541550 cacatttcttaagaaaaatagttagtacaactaatgtgtctattttgtgtgtcaatattatcaaattgtcctttatt--tatatgtattaaatttgactt 41541647  T
Q  410 ttcatattt 418  Q
    |||||||||    
T  41541648 ttcatattt 41541656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 370
Target Start/End: Complemental strand, 45283916 - 45283827
Alignment:
Q  281 tccctatatttaagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattac 370  Q
    ||||||||| ||||| |||||||  |||||| | |||||||||||| || ||| ||||| |||||||||| |||| ||||||||||||||    
T  45283916 tccctatatgtaagccccttttgttttttcaaatttcttaagaaaaattatcaatgtaattaatgtgtctgttttatgtgttaatattac 45283827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 12894278 - 12894182
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||||||||| ||  |||||||||| ||| || ||||||||||| |||||  | |||||| ||||||||||||||| || ||| ||||||    
T  12894278 taatgtgtctattttgtatggaaatattaccatattgtcatttgtttgtatttgtatttagtttgacttttcatatttcaagataatttattagtat 12894182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 40808037 - 40807989
Alignment:
Q  389 tatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  40808037 tatgtgtattaaatttgacttttcatatttcaagacaagttagtagtat 40807989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 33385318 - 33385374
Alignment:
Q  381 tttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||| ||||| ||| ||||||||| |||| ||||||||||||||||||||||||    
T  33385318 tttgtttatatgtatattaaatttgacttttcgtatttcaagacaagttagtagtat 33385374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 433
Target Start/End: Complemental strand, 45283528 - 45283468
Alignment:
Q  372 aaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||||||| |||||||||||| |||| |||||||||  ||||||||||||| ||||||||||    
T  45283528 aaattatcatttgtttgtatgggtattaaatttgactattcatatttcaag-caagttagta 45283468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 436
Target Start/End: Original strand, 10709381 - 10709441
Alignment:
Q  376 tatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    |||| ||||||| ||| ||||| |||||||||  |||||||||||| ||||||||||||||    
T  10709381 tatcatttgtttttatctgtattaaatttgactattcatatttcaaaacaagttagtagta 10709441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 41371818 - 41371782
Alignment:
Q  401 atttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||| |||||||||||||||||||||||||||||    
T  41371818 atttgacttttcatatttcaagacaagttagtagtat 41371782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 27571 - 27690
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    |||||||||||| |||| ||||| |  |||| ||||||||| ||||| ||| |||| ||||| || ||||||| | | ||||| ||||||||  ||| ||    
T  27571 ttcttaagaaaaattgttagtgttatgaatgcgtctattttatgtgtgaatgttactaaattgtcatttgtttatgtatgtattaaatttgattttttat 27670  T
Q  415 atttcaagacaagttagtag 434  Q
    ||| ||| |||| |||||||    
T  27671 attacaaaacaaattagtag 27690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 376
Target Start/End: Original strand, 27194062 - 27194097
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    |||||||| |||||||||||||||||||||||||||    
T  27194062 taatgtgtttattttgtgtgttaatattaccaaatt 27194097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 368
Target Start/End: Complemental strand, 4274017 - 4273955
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    |||||||| |||||||||||  |||| ||||||| |||||||| | |||| ||||||||||||    
T  4274017 ttttcacatttcttaagaaatattgttagtgtaattaatgtgtttgttttatgtgttaatatt 4273955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 2031264 - 2031344
Alignment:
Q  357 tgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||| | |||||| || |||||| |||| ||||| |||||  |  ||||||||||||||| || ||||||||||    
T  2031264 tgtgttaatataatcaaattgtcctttgttcgtatatgtattaaattatatttttcatatttcaagataaattagtagtat 2031344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 7727363 - 7727327
Alignment:
Q  401 atttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  7727363 atttgacttttcatattccaagacaagttagtagtat 7727327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 291 - 437
Target Start/End: Complemental strand, 99941 - 99794
Alignment:
Q  291 taagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgt 389  Q
    |||||| |||||||||||| || | || |||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||     
T  99941 taagcatcttttgcatttttcatatttgttaagaaaagttgttagtgcaacttatgtgtctattttgtgtgttaatattacgaaattgtcttttgtttga 99842  T
Q  390 atgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  99841 atgtgtattaaatttgacttttcatatttcaagacaagttagtagtat 99794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 1763810 - 1763941
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  1763810 ttttcatatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttg 1763909  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| |||||||||||||||||||||||    
T  1763910 acttttcaaatttcaagacaagttagtagtat 1763941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 31946021 - 31945890
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| |||||||    
T  31946021 ttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcgtttgtttatatgtgtattaaatttg 31945922  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || || ||||||||||||||||||||||||||    
T  31945921 actttacatatttcaagacaagttagtagtat 31945890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 30466077 - 30465946
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||| |||||||||| |||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30466077 tttttacatttcttaacaaaagttgtcggtgtaattaatatgtttgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttg 30465978  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||||||||||    
T  30465977 acttttcatatttcaagataagttagtagtat 30465946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 12514682 - 12514568
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| |||| |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  12514682 ttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcatatt 12514583  T
Q  418 tcaagacaagttagt 432  Q
    |||||||||||||||    
T  12514582 tcaagacaagttagt 12514568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 306 - 430
Target Start/End: Original strand, 16327120 - 16327244
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||     
T  16327120 ttttcacatttcttaagaaaagttgtcaatataattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtattaaattta 16327219  T
Q  406 acatttcatatttcaagacaagtta 430  Q
    || ||||||||||||||||||||||    
T  16327220 acttttcatatttcaagacaagtta 16327244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 15981791 - 15981922
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||  |||||| |||||||||| ||||||||||||||||||||||||| || || |||||||||||| | ||||||     
T  15981791 ttttcacatttcttaagaaaagttgttggtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcattagtttgtatgtgtcttaaattta 15981890  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||| ||||||    
T  15981891 acttttcatatttcaagacaagttaatagtat 15981922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 31536009 - 31536140
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||||||||| ||||||| |||| | |||||||| | ||||||||||| ||||||||||||||||| ||||||||| |||||||    
T  31536009 tttttacatttcttaagaaaagttgttagtgtaattaatatatctattttatttgttaatattatcaaattatcttttgtttatatgtgtattaaatttg 31536108  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||||||||||    
T  31536109 acttttcatatttcaagataagttagtagtat 31536140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 318 - 436
Target Start/End: Complemental strand, 34513315 - 34513197
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| |||||||  ||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||||||    
T  34513315 ttaagaaaatttgtcagcataaataatgtgtctgttttgtgtgttaatattacgaaattatcctttgtttgtatgtgtattaaatttgacttttcatatt 34513216  T
Q  418 tcaagacaagttagtagta 436  Q
    |||||||||| ||||||||    
T  34513215 tcaagacaagatagtagta 34513197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 430
Target Start/End: Original strand, 16350518 - 16350642
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||| ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||     
T  16350518 ttttcacattttttaataaaagttgtcagtgtaattaatgagtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtattaaattta 16350617  T
Q  406 acatttcatatttcaagacaagtta 430  Q
    || ||||||||||||||||||||||    
T  16350618 acttttcatatttcaagacaagtta 16350642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 270 - 437
Target Start/End: Complemental strand, 3888088 - 3887920
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgca-ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||| | ||| ||||||||||||||| |||||||| ||||||||||||||||| | || |  ||||||||||||||||||||||||||||    
T  3888088 tactccctccgtccttgtatgtaagcaccttttgcaattttcacatttcttaagaaaagttgttattgcagttaatgtgtctattttgtgtgttaatatt 3887989  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttga-catttcatatttcaagacaagttagtagtat 437  Q
    | |||||| |||| |||||  |||||||| ||||||||   |||||||||||||||||||||||||||||    
T  3887988 a-caaattgtcttatgtttacatgtgtattaaatttgattttttcatatttcaagacaagttagtagtat 3887920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 270 - 434
Target Start/End: Original strand, 19838891 - 19839056
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||||||| ||| | || ||||| |||| |||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||    
T  19838891 tactccctccgtccctatatgtaatccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatt 19838990  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    || ||||| || ||||||||||||||||| ||||||||| |||  |||||||||| || |||||||    
T  19838991 actaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagataaattagtag 19839056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 9461290 - 9461418
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||| |||||| |||||| |||||||| | |||| |||||||||||||| |||||||  ||||||||||||||||| |||||||    
T  9461290 ttttcacatttattaagaaatgttgtcggtgtaattaatgtgtttgttttatgtgttaatattactaaattattctttgtttgtatgtgtattaaatttg 9461389  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    || ||||||||||||||||| ||||||||    
T  9461390 acttttcatatttcaagacaggttagtag 9461418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 11302852 - 11302983
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||| ||| |||||||||| |||| |||||||||||||| ||||| || |||||||| |||||||| |||||||    
T  11302852 ttttcacatttcttaagaaaagttgttagtataattaatgtgtctgttttttgtgttaatattacaaaattgtcctttgtttgcatgtgtattaaatttg 11302951  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||| ||||||||||||  |||||||||    
T  11302952 acttttcacatttcaagacaaaatagtagtat 11302983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 307 - 437
Target Start/End: Complemental strand, 28238422 - 28238291
Alignment:
Q  307 tttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttga 406  Q
    ||||||| ||||||| |||| |||| ||| ||| |||||||||||||||||||||||||||||||| ||||||  |||||| ||||| ||| ||||||||    
T  28238422 tttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttga 28238323  T
Q  407 c-atttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||||||||||||||||||||||    
T  28238322 ctttttcatatttcaagacaagttagtagtat 28238291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 22410952 - 22410820
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||| |||| | |||||||||||||||||| |||||| ||||||||||||| |||||||    
T  22410952 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttttatgttaatattaccaaattgtcttttatttgtatgtgtattaaatttg 22410853  T
Q  406 acatttcatatttc-aagacaagttagtagtat 437  Q
    || ||||| ||| | ||||||| | ||||||||    
T  22410852 acctttcaaattacaaagacaaataagtagtat 22410820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 5895728 - 5895859
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| | ||||| |||||||||| |||||||| |||||||||| ||||| || ||| ||| ||||||||| ||||||     
T  5895728 ttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttatttttatgtgtattaaattta 5895827  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||| ||||    
T  5895828 acttttcatatttcaagacaagatagtggtat 5895859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 430
Target Start/End: Original strand, 20522978 - 20523093
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||||||| ||||| |||| || ||||| || || ||||||||| |||||||||||||||| | |||||||||||||||| ||||||||  ||||||    
T  20522978 ttcttaagaaatgttgttagtgcaattaatgagtttagtttgtgtgtcaatattaccaaattatttcttgtttgtatgtgtattaaatttgatttttcat 20523077  T
Q  415 atttcaagacaagtta 430  Q
    ||||||||||||||||    
T  20523078 atttcaagacaagtta 20523093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 33607387 - 33607483
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| | ||||||||| |||||||||||| || ||||||| |||||    
T  33607387 taatgtgtctatttagtgtgttaatattatcaaattatcctttgtttgtatgtgtgttaaatttgacttttcatatttcatgataagttagcagtat 33607483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 427
Target Start/End: Original strand, 6791338 - 6791494
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| |||||||  ||| | ||| |||||||| |||| |||| ||||||| ||||||||||| ||||| |||||||| |  ||||||||||||||||    
T  6791338 tactccctccatccccttatgttagccccttttgcttttttcacatttcttaaaaaaagttgtcaatgtaattaatgtgtgt--tttgtgtgttaatatt 6791435  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaag 427  Q
    |  ||||| || ||||||||||||||||| ||||||||| ||| | |||||||||||||    
T  6791436 attaaattgtcatttgtttgtatgtgtattaaatttgactttttaaatttcaagacaag 6791494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 306 - 404
Target Start/End: Original strand, 3729386 - 3729484
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaattt 404  Q
    |||| ||| |||||||||||| ||||  |||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||    
T  3729386 tttttacatttcttaagaaaaattgttggtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgtttgtatgtgtattaaattt 3729484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 421
Target Start/End: Original strand, 9428164 - 9428279
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||  ||||||||||||||||  | | ||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||| |||  |||||     
T  9428164 ttttcacgtttcttaagaaaagttgctactataattaatgtatctattttgtgtgttaatattatcaaattatcatttgtttgtatgtatattgaatttt 9428263  T
Q  406 acatttcatatttcaa 421  Q
    || |||||||||||||    
T  9428264 acttttcatatttcaa 9428279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 421
Target Start/End: Complemental strand, 10669366 - 10669268
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaa 421  Q
    |||| |||| |||| || |||||||||||||||||||||||||||||||||||| |  |||| |||||| ||||| ||||||||| |||||||||||||    
T  10669366 aaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgattgtatctgtattaaatttgacttttcatatttcaa 10669268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 437
Target Start/End: Original strand, 31780095 - 31780253
Alignment:
Q  281 tccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||||| |||||||| |||| ||||| || | ||||||| ||||||||  | || || ||||||||||||||||| |||| ||||||| ||||| ||    
T  31780095 tccctatatgtaagcaccatttgtatttttcatatttcttaataaaagttgataatgcaattaatgtgtctattttgtatgttgatattactaaattgtc 31780194  T
Q  380 ttttgtttgtatgtgtatcaaatttgac-atttcatatttcaagacaagttagtagtat 437  Q
     ||||||||| ||||||| |||||| ||  |||||| ||||||||||||||| ||||||    
T  31780195 ctttgtttgtttgtgtattaaatttcactttttcatttttcaagacaagttaatagtat 31780253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 437
Target Start/End: Complemental strand, 197558 - 197429
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||| ||||||||||||||| ||||| ||| |||||||| | |||||||||| |||||||  ||||| || ||||||||||||||||| |||||| |     
T  197558 ttcacatttcttaagaaaagttatcagtataattaatgtgtttgttttgtgtgtcaatattattaaattgtcatttgtttgtatgtgtattaaatttaat 197459  T
Q  408 atttcatatttcaagacaagttagtagtat 437  Q
     |||   |||| ||||||||||||||||||    
T  197458 tttttcaattttaagacaagttagtagtat 197429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 341 - 430
Target Start/End: Complemental strand, 12514829 - 12514740
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||| |||| |||| |||||||||| |||| ||||||    
T  12514829 taatgtgtccattttgtatgttaatattaccaaattatcatttgtttatatgtgtattaaatatgacctttcatatttgaagataagtta 12514740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 423
Target Start/End: Complemental strand, 5084650 - 5084530
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaat----gtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaa 401  Q
    |||||||| ||||||||||||||||| ||||||| ||||    |||| | |||||||||||||||||| |||||| || ||||||||||||||||| |||    
T  5084650 ttttcacatttcttaagaaaagttgttagtgtaattaataaatgtgtttgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtat-aaa 5084552  T
Q  402 tttgacatttcatatttcaaga 423  Q
     ||||| ||| |||||||||||    
T  5084551 gttgactttttatatttcaaga 5084530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 16186570 - 16186698
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||  ||||||||||| | ||||||| |||||||||| |||||| ||||||| |||| ||||| ||  ||||||||||||  || |||||||    
T  16186570 ttttcacattttgtaagaaaagttattagtgtaattaatgtgtctgttttgtatgttaat-ttacgaaattgtcccttgtttgtatgt--attaaatttg 16186666  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||| ||||    
T  16186667 acttttcatatttcaagacaagatagtggtat 16186698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 372 - 433
Target Start/End: Complemental strand, 12503656 - 12503595
Alignment:
Q  372 aaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    ||||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  12503656 aaattgtcttttgtttgtatgtgtagtaaatttgacttttcatatttcaagacaagttagta 12503595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 430
Target Start/End: Complemental strand, 31153062 - 31152973
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||||||||||||| | ||| |||||||| ||||| |  ||||||||||||||||| ||||||||| |||||||||| || ||||||||    
T  31153062 taatgtgtctattttatatgtcaatattactaaattgttatttgtttgtatgtgtattaaatttgacttttcatattttaaaacaagtta 31152973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 4250767 - 4250703
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattac 370  Q
    |||| ||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  4250767 tttttacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 4250703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 1514319 - 1514236
Alignment:
Q  324 aaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||||| |||| || |||| ||| |||||||| |||||||||||||||||||||  |||||| ||||||||| |||||||||    
T  1514319 aaagttgttagtgcaattaatatgtttattttgtatgttaatattaccaaattatcaattgtttatatgtgtattaaatttgac 1514236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 391
Target Start/End: Original strand, 30248563 - 30248645
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtat 391  Q
    |||||| ||||||||||||||||| ||||||  |||||||| | |||||||||||||||||||||||||  | |||||||||||    
T  30248563 ttcacatttcttaagaaaagttgtaagtgtat-taatgtgtttgttttgtgtgttaatattaccaaattggcatttgtttgtat 30248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 437
Target Start/End: Original strand, 31039191 - 31039274
Alignment:
Q  354 ttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| ||| |||  || ||||| |||||||||||||| ||  |||||||| |||||||||||||||||||||||||||||    
T  31039191 ttgtgtgtaaattttattaatttatcatttgtttgtatgtgcatttaatttgacttttcatatttcaagacaagttagtagtat 31039274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 11081893 - 11081974
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgttt 387  Q
    ||||||||  |||||||||||||||| ||||||| |||| | |||||||| ||| ||||| ||||||||||||| |||||||    
T  11081893 ttttcacatatcttaagaaaagttgttagtgtaattaatatatctattttctgtattaatgttaccaaattatcctttgttt 11081974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 428
Target Start/End: Complemental strand, 31487111 - 31487051
Alignment:
Q  368 taccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagt 428  Q
    ||||||||| |||||||||||||||||||| || |||||| ||||||||||||||| ||||    
T  31487111 taccaaattgtcttttgtttgtatgtgtattaagtttgacttttcatatttcaagataagt 31487051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 433
Target Start/End: Original strand, 3729485 - 3729546
Alignment:
Q  372 aaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    ||||| || ||||||||||||||||| |||||| || || ||||||||||||||||||||||    
T  3729485 aaattgtcatttgtttgtatgtgtattaaatttaactttacatatttcaagacaagttagta 3729546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 30248946 - 30248990
Alignment:
Q  393 tgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||    
T  30248946 tgtattaaatttgacttttcatatttcaagacaagttagtagtat 30248990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 11082152 - 11082199
Alignment:
Q  390 atgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||    
T  11082152 atgtgtattaaatttgaattttcatatttcaagacaagttagtagtat 11082199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 437
Target Start/End: Original strand, 7365526 - 7365615
Alignment:
Q  348 tctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||| |  ||||||| |||||||| ||| ||||||| ||||| | ||||||  ||||||||||||| | |||||| ||||||    
T  7365526 tctattttgtgtttgcatattactaaattatcatttatttgtatttgtattatatttgatttttcatatttcaaaataagttaatagtat 7365615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 9941031 - 9941150
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||||  | ||||  |||||| |||| ||||||| | ||| |||| ||| | |  |||||||| | ||||||  |||||||| |||||||||    
T  9941031 ttaagaaaagttgataatgtagttaatgtatctaatttgtgtttgaattttactaaactgttctttgtttgcaagtgtatttaatttgacttttcatatt 9941130  T
Q  418 tcaagacaagttagtagtat 437  Q
    | ||||||||||| ||||||    
T  9941131 taaagacaagttaatagtat 9941150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 429
Target Start/End: Original strand, 6418956 - 6419022
Alignment:
Q  363 aatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtt 429  Q
    ||||||| |||||| |  ||||||||||| ||||| | ||||||| ||||||||||||||| |||||    
T  6418956 aatattatcaaatttttctttgtttgtatttgtattacatttgacttttcatatttcaagataagtt 6419022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 5457238 - 5457315
Alignment:
Q  360 gttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||| |||||| |  ||||||||||  ||||| ||||||||  ||| | ||||||| |||||||||||||||    
T  5457238 gttaatattatcaaattgttctttgtttgtaaatgtattaaatttgattttttaaatttcaaaacaagttagtagtat 5457315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 8644905 - 8644773
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaat---attaccaaattatcttttgtttgtatgtgtatcaaat 402  Q
    |||||||| ||||||| ||||||||| ||   || |||| | |||||||||| |||||||   ||||||||||||  || ||||||||| ||||  ||||    
T  8644905 ttttcacatttcttaaaaaaagttgttagcacaattaatatatctattttgtatgttaatattattaccaaatta--ttctgtttgtatttgtactaaat 8644808  T
Q  403 ttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||  ||||  |||| ||||||| ||||||||||    
T  8644807 ttgaattttctcattttaagacaatttagtagtat 8644773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 31487480 - 31487407
Alignment:
Q  297 ccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatta 369  Q
    |||||||| |||| |||| ||||| | ||||||||| ||  ||| |||||||| ||||||||||||||||||||    
T  31487480 ccttttgctttttgcacatttcttgaaaaaagttgttagcataattaatgtgtatattttgtgtgttaatatta 31487407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 270 - 437
Target Start/End: Complemental strand, 15898606 - 15898439
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatta 369  Q
    ||||||| || ||| ||||| ||| | || |||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  15898606 tactccctccgtccatatatgtaaaccccctttgcattttcacttttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 15898507  T
Q  370 ccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
     |||||| || ||||||||||||||||| ||||||| | ||||| ||||||||||||||||| |||||    
T  15898506 tcaaattgtcctttgtttgtatgtgtattaaatttggcctttcaaatttcaagacaagttagcagtat 15898439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 43060617 - 43060487
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  43060617 ttttcacattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccatattatcttttgtttgtatgtgtattaaatttg 43060518  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||| |||||||||||||||||||    
T  43060517 ac-tttcatattccaagacaagttagtagtat 43060487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 297 - 437
Target Start/End: Complemental strand, 3559143 - 3559003
Alignment:
Q  297 ccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgta 396  Q
    |||||||  |||||||| |||||||||||| ||||  || ||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  3559143 ccttttgttttttcacatttcttaagaaaaattgttggtataattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgta 3559044  T
Q  397 tcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    | ||||||||| ||||||||||||||| |||||||||||||    
T  3559043 ttaaatttgacttttcatatttcaagataagttagtagtat 3559003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 29866186 - 29866317
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| |||| || |||| ||||| |||||||||||||||||||||| || || ||||||||||||||||| |||||||    
T  29866186 ttttcacatttcttaagaaaagttgttagtgcaattaatatgtcttttttgtgtgttaatattaccaagttgtcctttgtttgtatgtgtattaaatttg 29866285  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||||||||||    
T  29866286 acttttcatatttcaagacaagttagtagtat 29866317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 34877663 - 34877794
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  34877663 ttttcacatttcttaagaaatgttgtcagtgtaattaatttgtctgttttgtgtgttaatattaccaaattatcatttgtttgtgtgtgtattaaatttg 34877762  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||| |||||||||||||| |||||||    
T  34877763 acttttcatttttcaagacaagtttgtagtat 34877794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 25017781 - 25017650
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||  ||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  25017781 ttttcacgtttcttaagaaatgttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttg 25017682  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||| ||||||||||| ||||||    
T  25017681 acttttcatattttaagacaagttaatagtat 25017650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 306 - 436
Target Start/End: Complemental strand, 35569112 - 35568982
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||| |||| ||| |||||||||| |||||||  ||||||||||||||||| |||||||    
T  35569112 ttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtattaatattactaaattattctttgtttgtatgtgtattaaatttg 35569013  T
Q  406 acatttcatatttcaagacaagttagtagta 436  Q
    || |||||||||||||||||| |||||||||    
T  35569012 acttttcatatttcaagacaaattagtagta 35568982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 306 - 426
Target Start/End: Original strand, 36177289 - 36177409
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  36177289 tttttacatttcttaagaaaagttatcagtgtaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttg 36177388  T
Q  406 acatttcatatttcaagacaa 426  Q
    || ||||||||||||| ||||    
T  36177389 acttttcatatttcaaaacaa 36177409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 270 - 437
Target Start/End: Complemental strand, 38972270 - 38972103
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||||||| ||| ||| |||| |||||| |||| ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||    
T  38972270 tactccctccgtccctatatgtaaacacattttacatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctatttaaa-tgttaatatt 38972172  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| || ||||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||||    
T  38972171 accaaattgtcctttgtttgtatgtgtattaaatttgactttttatatttcaagataagttagtagtat 38972103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 10523369 - 10523250
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||  || |||||    
T  10523369 ttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgttttttgtttttatgtgtattaaatttgactatttatatt 10523270  T
Q  418 tcaagacaagttagtagtat 437  Q
    ||||||||||||||||||||    
T  10523269 tcaagacaagttagtagtat 10523250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 433
Target Start/End: Original strand, 10934003 - 10934130
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || || ||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||||||  ||||||||||||||||| |||||||    
T  10934003 ttttcacattttttcagaaatgttgtcagtgtaattaatgtgtctgttttgtatgttaatattaccaaattattctttgtttgtatgtgtattaaatttg 10934102  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || ||||||||||||| |||||||||||    
T  10934103 acttttcatatttcaatacaagttagta 10934130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 27587835 - 27587966
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||| || ||||| ||||||||||| |||||||    
T  27587835 ttttcacatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtatgtatgtgtattaaatttg 27587934  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||| ||||||| |||||||||||||||    
T  27587935 atttttcaaatttcaatacaagttagtagtat 27587966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 30348184 - 30348053
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||| |||||||||||| | | ||  |||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| |||||||    
T  30348184 ttttcacatttctgaagaaaagttgttaatttacttaatgtgtctattttgtgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaatttg 30348085  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||| ||||||||||||||    
T  30348084 acttttcatatttcaaggcaagttagtagtat 30348053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 264 - 434
Target Start/End: Complemental strand, 39690636 - 39690465
Alignment:
Q  264 ataatttactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgtt 362  Q
    ||||| ||||||| || ||||||||| ||| | || ||||| |||| |||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||    
T  39690636 ataatatactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgtt 39690537  T
Q  363 aatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    |||||||| ||||| || ||||||||||||||||| ||||||||| |||  ||||||||||||| |||||||    
T  39690536 aatattactaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaattagtag 39690465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 306 - 436
Target Start/End: Original strand, 20946084 - 20946214
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||||||| ||||| |||| || ||| ||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||||||    
T  20946084 ttttcatatttcttaagaaacgttgttagtgcaattaacgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttg 20946183  T
Q  406 acatttcatatttcaagacaagttagtagta 436  Q
    || ||||||||||||| ||||||||||||||    
T  20946184 acttttcatatttcaaaacaagttagtagta 20946214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 27642499 - 27642627
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  27642499 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaatttg 27642598  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    || |||  |||||||||| || |||||||    
T  27642599 actttttgtatttcaagataaattagtag 27642627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 430
Target Start/End: Original strand, 27798153 - 27798277
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||  |||||||||||| |||| ||||| |||||||||||||||||| ||||||||| ||||||||||||||||| || ||||    
T  27798153 ttttcacattttttaagaaatattgtcagtgtaattaatttgtctgttttgtgtgttaatattatcaaattatcatttgtttgtatgtgtattaagtttg 27798252  T
Q  406 acatttcatatttcaagacaagtta 430  Q
    || ||||||||||||||||||||||    
T  27798253 acttttcatatttcaagacaagtta 27798277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 3247381 - 3247250
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||| |||||||| |||| ||||| |||||| |||||||||||| ||||| || ||||||||||||||||| |||||||    
T  3247381 ttttcacatttcttaagaaaagttgacagtgtaattaatatgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 3247282  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| ||| | |||||||    
T  3247281 acttttcatatttcaagaaaagattgtagtat 3247250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 4738627 - 4738758
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||  |||||||||||| |||||| | | ||||||||||||||||||| |||||  | ||||||| ||||||||| |||||||    
T  4738627 ttttcacatttcttaagaaatattgtcagtgtaattaatgtatttgttttgtgtgttaatattactaaattgacctttgtttttatgtgtattaaatttg 4738726  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||||||||||    
T  4738727 acttttcatatttcaagacaagttagtagtat 4738758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 270 - 434
Target Start/End: Original strand, 21912081 - 21912245
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatta 369  Q
    ||||||| || ||||||||| ||||| |||||    |||||||| || |||||||||||||| ||||||  ||||||||||||||| |||||||||||||    
T  21912081 tactccctccgtccctatatataagcccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatta 21912180  T
Q  370 ccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
      ||||| |||||||||||||||||||| || |||||| |||  ||||||||||||| |||||||    
T  21912181 ttaaattgtcttttgtttgtatgtgtattaagtttgactttttgtatttcaagacaaattagtag 21912245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 5845173 - 5845304
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||||||  ||||||||||||| |||||| | | |||||||| ||||||||| |||||| || ||||||||||||||||| |||||||    
T  5845173 ttttcatatttcttaagaattgttgtcagtgtaattaatgtatttgttttgtgtattaatattatcaaattgtcatttgtttgtatgtgtattaaatttg 5845272  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||| |||||||||||||||    
T  5845273 acttttcatatttcaatacaagttagtagtat 5845304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 4857605 - 4857470
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaat----gtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaa 401  Q
    |||||||| ||||||| ||||||||| ||||||| ||||    ||||||||||| |||||||||||||| ||||| || ||||||||||||||||| |||    
T  4857605 ttttcacatttcttaataaaagttgttagtgtaattaattaatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaa 4857506  T
Q  402 tttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||| |||||||||| |||| |||||||||||||    
T  4857505 tttgacttttcatattttaagataagttagtagtat 4857470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 270 - 437
Target Start/End: Complemental strand, 16258 - 16091
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatta 369  Q
    ||||||| |||||||||| | ||||  |||||  | |||||||| |||| | | |||||||| |||| || |||||| |||||||| ||||| |||||||    
T  16258 tactccctccatccctatttataagtccctttacctttttcacatttctaacggaaagttgttagtgcaattaatgtatctattttttgtgtgaatatta 16159  T
Q  370 ccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    | ||||| || ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||    
T  16158 ctaaattgtcctttgtttgtatttgtattaaatttgacttttcacatttcaagacaagttagtagtat 16091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 11980725 - 11980844
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||   ||||| ||||||||| ||||||||| |||||||||    
T  11980725 ttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattactatattatccactgtttatatgtgtattaaatttgacttttcatatt 11980824  T
Q  418 tcaagacaagttagtagtat 437  Q
    | |||||| |||||||||||    
T  11980825 ttaagacatgttagtagtat 11980844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 16496434 - 16496564
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||  ||||||||| ||||||| || | ||||||||| |||| ||||||||||||||||||| ||||||||||||| ||| |||||||    
T  16496434 ttttcacatttcttaccaaaagttgttagtgtaattattatgtctattt-gtgtattaatattaccaaattatcctttgtttgtatgtatattaaatttg 16496532  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||| |||||| ||||||    
T  16496533 acttttcatatttcaagataagttaatagtat 16496564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 21574987 - 21574857
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||| | ||||||  ||||||||||||||||| |||||||||||||||||| || |||||||||| |||||| |||||||    
T  21574987 ttttcacatttcttaagaaatgtttttagtgtacttaatgtgtctattttgtatgttaatattaccaaattgtcctttgtttgta-gtgtattaaatttg 21574889  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
     | |||||| |||||||||||||| |||||||    
T  21574888 tcttttcatgtttcaagacaagtttgtagtat 21574857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 36347708 - 36347581
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||| ||||||||||||||||| |||||| ||| |||||||| ||||||||| ||||||   |||||||||||||||||| |||||||    
T  36347708 ttttcagatttcttaataaaagttgtcagtgtaattaatgtatctgttttgtgtattaatattatcaaattgatttttgtttgtatgtgtattaaatttg 36347609  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    ||  |||| |||||||||||||||||||    
T  36347608 actattcacatttcaagacaagttagta 36347581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 315 - 437
Target Start/End: Original strand, 43453988 - 43454110
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    ||||||| ||||||||| ||| ||| |||||||||  |||||| ||||||||||| |||| |||||||||||||||||||||| ||||||||  |||||     
T  43453988 ttcttaaaaaaagttgttagtataattaatgtgtcagttttgtatgttaatattatcaaactatcttttgtttgtatgtgtattaaatttgatttttcaa 43454087  T
Q  415 atttcaagacaagttagtagtat 437  Q
    |||||||||||||||||| ||||    
T  43454088 atttcaagacaagttagtggtat 43454110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 320 - 437
Target Start/End: Complemental strand, 12895302 - 12895185
Alignment:
Q  320 aagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttc 419  Q
    |||| |||||||| |||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||  ||| | ||||     
T  12895302 aagagaagttgtcggtgtaattaatgtgtctgttttgtgtattaatattaccaaattgtcttttgtttgtatgtgtattaaatttgattttttaaatttt 12895203  T
Q  420 aagacaagttagtagtat 437  Q
    ||||||||||||| ||||    
T  12895202 aagacaagttagttgtat 12895185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 315 - 433
Target Start/End: Original strand, 600771 - 600889
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    |||||||||||| |||| |||| || ||||||||||||| ||||||||||||||| |||||| || ||||||||||| ||||| ||||||||  ||| ||    
T  600771 ttcttaagaaaacttgttagtgcaattaatgtgtctattatgtgtgttaatattatcaaattgtcatttgtttgtatatgtattaaatttgattttttat 600870  T
Q  415 atttcaagacaagttagta 433  Q
    |||| ||||||||||||||    
T  600871 attttaagacaagttagta 600889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 430
Target Start/End: Original strand, 4745107 - 4745248
Alignment:
Q  291 taagcaccttttgcatttt-cacacttctt-aagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttg 388  Q
    |||||||| |||||||||| |||| || || ||||||||| || |||| || |||||||| ||||||||| ||||||||||||||||| || ||||||||    
T  4745107 taagcaccctttgcatttttcacatttttttaagaaaagtagttagtgcaattaatgtgtttattttgtgggttaatattaccaaattgtcatttgtttg 4745206  T
Q  389 tatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||||||| ||||||||| ||| |||||| |||||| ||||    
T  4745207 tatgtgtattaaatttgactttttatattttaagacaggtta 4745248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 350 - 437
Target Start/End: Complemental strand, 9375702 - 9375615
Alignment:
Q  350 tattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| ||| ||||||||  ||||||||||||||| |||||||||||||    
T  9375702 tattttgtgtgctaatattaccaaattgtcttttgtttgtatgtttattaaatttgatttttcatatttcaagataagttagtagtat 9375615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 40979319 - 40979188
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| | ||||||| |||||||||||  |||| |||  ||| | |||||||| |||||||||| ||||| || ||||||||||||||||| |||||||    
T  40979319 ttttcatatttcttaataaaagttgtcaaggtaattaacatgtatgttttgtgtattaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 40979220  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||| |||||||| |||||||||    
T  40979219 acttttcatatttaaagacaagatagtagtat 40979188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 41521197 - 41521316
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    ||||||||| |||| |||| || |||| ||||||||||||||||||||||||  ||||| || ||||||| ||||||||| ||||||||| |||||||||    
T  41521197 ttaagaaaaattgttagtgaaattaatatgtctattttgtgtgttaatattattaaattgtcatttgtttatatgtgtattaaatttgacttttcatatt 41521296  T
Q  418 tcaagacaagttagtagtat 437  Q
    |||| | ||||| |||||||    
T  41521297 tcaaaataagtttgtagtat 41521316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 346 - 436
Target Start/End: Complemental strand, 5151267 - 5151177
Alignment:
Q  346 tgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    ||||| |||||||| |||||||||||||||| || ||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  5151267 tgtcttttttgtgtattaatattaccaaattgtcctttatttgtgtgtgtattaaatttgacttttcatatttcaagacaagttagtagta 5151177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 19281569 - 19281468
Alignment:
Q  335 tgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    ||||| |||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||| |||| |||||||    
T  19281569 tgtaattaatgtatctgttttgtgtattaatattactaaattatcttttgtttgtatgtgtattaaatttga-aattcatatttcaaaacaaattagtag 19281471  T
Q  435 tat 437  Q
    |||    
T  19281470 tat 19281468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 42644611 - 42644454
Alignment:
Q  281 tccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    ||||||| | ||| ||||||||||||||| |||| ||   || ||||| ||| ||||||| |||||||  |||||||| || |||||||| |||||| ||    
T  42644611 tccctatttctaaacaccttttgcatttttcacattttaaaaaaaaagctgttagtgtaattaatgtgattattttgtatgctaatattatcaaattgtc 42644512  T
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
     ||||||||||||| ||| ||||||| | |||||||||||||||||||||||| ||||    
T  42644511 atttgtttgtatgtatattaaatttgtcttttcatatttcaagacaagttagttgtat 42644454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 30317793 - 30317877
Alignment:
Q  353 tttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||||||||| || ||||||||| ||||||| ||||||||| |||||||||||||  ||||||||||||||    
T  30317793 tttgtgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaatttgacttttcatatttcaatgcaagttagtagtat 30317877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 9946465 - 9946334
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||| ||||||||||  | ||| |||||||||| ||||  || |||||||||| |||||||| |||||||||| |||||| ||||| |    
T  9946465 ttttcacattttttaataaaagttgtcgatataattaatgtgtctgttttacgtattaatattacgaaattatcctttgtttgtacgtgtattaaattcg 9946366  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| ||||||||||||||| |||||||||    
T  9946365 actttttatatttcaagacaagatagtagtat 9946334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 14044605 - 14044474
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| | || |  |||| |||||||||| ||| ||||||||| ||||||||| ||| ||| ||||||| | |||||||    
T  14044605 ttttcacatttcttaagaaaagttgttaatgcagttaatatgtctattttatgtattaatattatcaaattatcatttatttttatgtgtgttaaatttg 14044506  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||| |||| ||||||| |||||    
T  14044505 acttttcatatttgaagataagttagcagtat 14044474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 421
Target Start/End: Original strand, 18729585 - 18729704
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc----ttttgtttgtatgtgtatcaaa 401  Q
    |||||||| |||||||||||| || |  |||||| |||||||||||||||||||||||||||||  ||| ||||     ||||||||||||||||| |||    
T  18729585 ttttcacatttcttaagaaaaattatttgtgtaattaatgtgtctattttgtgtgttaatattattaaagtatcatttgtttgtttgtatgtgtattaaa 18729684  T
Q  402 tttgacatttcatatttcaa 421  Q
    |||||| |||||||||||||    
T  18729685 tttgacttttcatatttcaa 18729704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 10656589 - 10656718
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| | || || ||||||||  ||||| |||||||| |||||||||||||||||| |||||||  || | |||||||    
T  10656589 ttttcacatttcttaagaaaaattgttaatgcaattaatgtgt--attttatgtgttaaaattaccaaattatcttttttttgtattggtgttaaatttg 10656686  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||| | ||||||| |||||    
T  10656687 acttttcatatttcaacataagttagcagtat 10656718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 437
Target Start/End: Complemental strand, 36750904 - 36750752
Alignment:
Q  284 ctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttt 382  Q
    |||||| ||||| |||||| |||||| |||| ||||||| ||||||||| || |||| |||||||| |  |||||||||||||||||  | | | || ||    
T  36750904 ctatatgtaagccccttttacatttttcacaattcttaataaaagttgttagcgtaagtaatgtgtgt--tttgtgtgttaatattattagactgtcctt 36750807  T
Q  383 tgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||| ||||||||| ||||||||| ||| ||||||||| ||||||||| |||||    
T  36750806 tgtttatatgtgtattaaatttgactttttatatttcaaaacaagttagcagtat 36750752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 437
Target Start/End: Complemental strand, 25690794 - 25690662
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat--taccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||| |||||||||||||||||| |||||| |||||||| | ||||||||||||||||  |  |||||| || ||||||||||||||||| |||||      
T  25690794 ttcacatttcttaagaaaagttgtcggtgtaattaatgtgtatgttttgtgtgttaatatagttacaaattgtcctttgtttgtatgtgtattaaattca 25690695  T
Q  406 ac-atttcatatttcaagacaagttagtagtat 437  Q
    ||  ||| | |||||||||||||||||| ||||    
T  25690694 acttttttaaatttcaagacaagttagttgtat 25690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 298 - 397
Target Start/End: Complemental strand, 31642584 - 31642485
Alignment:
Q  298 cttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgta 396  Q
    |||||| ||||| |||| || |||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||| | |||||||||| ||||||||    
T  31642584 cttttgtattttacacatttattaaaaaaaattgtcagtgtaattaatgtgtct-ttttgtgtgttaatattaccaaactgtcttttgtttatatgtgta 31642486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 430
Target Start/End: Complemental strand, 732014 - 731935
Alignment:
Q  352 ttttgtgtgttaatattaccaaattat-cttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||| |||||||   ||||||||||||||||||||||    
T  732014 ttttgtgtgttaatattatcaaattgttcttttgtttgtatgtgtattaaatttgttttttcatatttcaagacaagtta 731935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 15967219 - 15967148
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatta 377  Q
    |||||||| ||||||||||| |||||| |||||| |||||||||| |||||||| |||||||||||||||||    
T  15967219 ttttcacatttcttaagaaaggttgtcggtgtaattaatgtgtctgttttgtgtattaatattaccaaatta 15967148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 34676171 - 34676249
Alignment:
Q  359 tgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||| | ||||||||||| | ||||||| |||||    
T  34676171 tgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgacttatcatatttcaatataagttagcagtat 34676249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 415
Target Start/End: Complemental strand, 3631225 - 3631118
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| |||| ||||| |||||| |||||||||  |||||||||||||||||||  ||||  | ||||||||||||||||| |||||||    
T  3631225 ttttcacatttcttaaaaaaa-ttgtc-gtgtaattaatgtgtcggttttgtgtgttaatattacgcaattgacctttgtttgtatgtgtattaaatttg 3631128  T
Q  406 acatttcata 415  Q
    || |||||||    
T  3631127 acttttcata 3631118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 370 - 437
Target Start/End: Original strand, 7736041 - 7736108
Alignment:
Q  370 ccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||| ||||||||||||||| | ||||||||| ||||||||||||||| ||||||| |||||    
T  7736041 ccaaattatcatttgtttgtatgtgtgttaaatttgacttttcatatttcaagataagttagcagtat 7736108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 32401501 - 32401430
Alignment:
Q  366 attaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||| | |||||||||||||||||||| ||||||||  |||||||||| |||||||||| |||||||    
T  32401501 attaccaaaatgtcttttgtttgtatgtgtattaaatttgatttttcatattttaagacaagttggtagtat 32401430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 129624 - 129677
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  129624 aaaagttatcagtgtaattaatgtgtctattttgtgtattaatattaccaaatt 129677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 32067825 - 32067906
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgttt 387  Q
    |||| ||| |||||||||||| | || |||| || | |||||||||||||||||||||||||||||||||| || |||||||    
T  32067825 tttttacatttcttaagaaaaatagttagtgcaattcatgtgtctattttgtgtgttaatattaccaaattgtcatttgttt 32067906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 430
Target Start/End: Complemental strand, 5764290 - 5764206
Alignment:
Q  346 tgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||||||||||||||||| ||||| |||||||| |||||||  ||  |||| |||||| || |||||||||||| |||||||||    
T  5764290 tgtctattttgtgtgttaacattactaaattatcctttgtttacataagtattaaatttaacttttcatatttcacgacaagtta 5764206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 430
Target Start/End: Original strand, 33583810 - 33583934
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||| | ||| |  |||| | |||||||||||||||||||||| |||||||| ||| |||  | |||||| |||||||    
T  33583810 ttttcacatttcttaaaaaaagttgttaatgttatcaatgcgactattttgtgtgttaatattactaaattatcctttatttaaacgtgtattaaatttg 33583909  T
Q  406 acatttcatatttcaagacaagtta 430  Q
    |  || ||| ||| |||||||||||    
T  33583910 attttacattttttaagacaagtta 33583934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 7510603 - 7510670
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaa 373  Q
    |||||||| || |||||||||||| | ||||||| |||||||| | ||||||||||||||||||||||    
T  7510603 ttttcacattttttaagaaaagttattagtgtaattaatgtgtatgttttgtgtgttaatattaccaa 7510670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 433
Target Start/End: Original strand, 16969371 - 16969498
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||| |||| |||| ||| ||| ||||||||||| ||||| ||||||||||| |||| | |  ||| ||||||||||| | |||||||    
T  16969371 ttttcacattttttaacaaaaattgttagtataattaatgtgtctaatttgtttgttaatattatcaaactgttatttatttgtatgtgtgttaaatttg 16969470  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    |  ||| |||||| ||||||| ||||||    
T  16969471 aattttaatattttaagacaatttagta 16969498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 429
Target Start/End: Original strand, 457780 - 457893
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgt--atcaaatttgacatttcata 415  Q
    |||| ||||||||| |||  || |||||| |||||||||||| | |||||||  ||||| || ||||||| |||||||  || |||||||||||||||||    
T  457780 ttaataaaagttgttagtacaattaatgtatctattttgtgtctgaatattattaaattgtcatttgtttatatgtgtgtattaaatttgacatttcata 457879  T
Q  416 tttcaagacaagtt 429  Q
    ||| |||| |||||    
T  457880 ttttaagagaagtt 457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 8718001 - 8717943
Alignment:
Q  371 caaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtt 429  Q
    |||||| || ||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  8718001 caaattgtcatttgtttgtatatgtattaaatttgacttttcatatttcaagacaagtt 8717943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 24781346 - 24781245
Alignment:
Q  335 tgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagac-aagttagta 433  Q
    ||||| |||||||| |||||||| ||||||||||| |||||| | | || ||||||||||||| ||||||||  ||||| |||| ||||| |||||||||    
T  24781346 tgtaattaatgtgtttattttgtatgttaatattatcaaattgt-tcttttttgtatgtgtattaaatttgatttttcacatttgaagacaaagttagta 24781248  T
Q  434 gta 436  Q
    |||    
T  24781247 gta 24781245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 418
Target Start/End: Complemental strand, 19089081 - 19089016
Alignment:
Q  353 tttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatattt 418  Q
    ||||||| |||||||||| ||||| || ||||||||||| ||||| ||||||||| ||||||||||    
T  19089081 tttgtgtattaatattactaaattgtcatttgtttgtatttgtattaaatttgacttttcatattt 19089016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 556054 - 556118
Alignment:
Q  362 taatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaa 426  Q
    ||||||||| ||||| || ||| | ||||| ||||| ||||||||| ||||||||||||||||||    
T  556054 taatattactaaattgtcatttttctgtatatgtattaaatttgacttttcatatttcaagacaa 556118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 376
Target Start/End: Original strand, 29874210 - 29874245
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    |||||| |||||||||||||||||||||||||||||    
T  29874210 taatgtatctattttgtgtgttaatattaccaaatt 29874245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 33862923 - 33862852
Alignment:
Q  306 ttttcacacttctt-aagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    |||||||| ||||| ||||||| |||||||||||| |||||||||| |||||| |  ||||||||| |||||    
T  33862923 ttttcacatttctttaagaaaaattgtcagtgtaattaatgtgtctgttttgtatactaatattactaaatt 33862852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 32402164 - 32402094
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    |||| ||| |||| || ||||||||||||| ||| |||||||||| | ||| ||||| |||||||||||||    
T  32402164 ttttgacatttctaaaaaaaagttgtcagtttaattaatgtgtctgtgttgcgtgttgatattaccaaatt 32402094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 32068070 - 32068115
Alignment:
Q  393 tgtatcaaatttgacatttcatatttcaagac-aagttagtagtat 437  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||||    
T  32068070 tgtattaaatttgacttttcatatttcaagacaaagttagtagtat 32068115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 20976397 - 20976353
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtct 350  Q
    |||||| | |||||||||||| |||||||||||| ||||||||||    
T  20976397 ttttcatatttcttaagaaaatttgtcagtgtaattaatgtgtct 20976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 85)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 8065180 - 8065049
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||| ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || ||||    
T  8065180 ttttcacatttcctaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaactttg 8065081  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||||||||||||||||||||||    
T  8065080 atttttcatatttcaagacaagttagtagtat 8065049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 306 - 436
Target Start/End: Original strand, 24774862 - 24774992
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| || | ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  24774862 ttttcacattttttaagaaaatttattagtgtaattaatgtatctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttg 24774961  T
Q  406 acatttcatatttcaagacaagttagtagta 436  Q
    || ||||||||||||||||||||||||||||    
T  24774962 acttttcatatttcaagacaagttagtagta 24774992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 9718280 - 9718149
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  9718280 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattattctttgtttgtatgtgtattaaatttg 9718181  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
     | | || ||||||||||||||||||||||||    
T  9718180 tcttatcgtatttcaagacaagttagtagtat 9718149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 27297574 - 27297705
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||  ||| ||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  27297574 ttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttgtttgtatgtgtattaaatttg 27297673  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||||||||    
T  27297674 acttttcatatttcaagacaagatagtagtat 27297705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 44424592 - 44424723
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||| ||||| || ||||||||||||||||| |||||||    
T  44424592 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttg 44424691  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||||||||    
T  44424692 acttttcatatttcaagacaagatagtagtat 44424723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 2131754 - 2131885
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||||||||||||||| |||| || |||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  2131754 tttttacatttcttaagaaaagttgttagtgcaattaacatgtctattttgtgtgttaatattaccaaattatcttttgtttgtatctgtattaaatttg 2131853  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||| ||||||||||||| ||||    
T  2131854 acttttcatatttaaagacaagttagttgtat 2131885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 41665707 - 41665838
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||| || |||||| || ||||||||||||||||| ||||||     
T  41665707 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatagtatcaaattgtcctttgtttgtatgtgtattaaattta 41665806  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||||||||||| ||||||    
T  41665807 acttttcatatttcaagacaagttaatagtat 41665838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 306 - 427
Target Start/End: Original strand, 37355033 - 37355154
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||||||||  |||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  37355033 ttttcacatttcttaagaaaagttgtttgtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttg 37355132  T
Q  406 acatttcatatttcaagacaag 427  Q
    || |||||||||||||||||||    
T  37355133 acttttcatatttcaagacaag 37355154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 306 - 430
Target Start/End: Complemental strand, 28265059 - 28264935
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||||||| || ||||||||||||| ||| |||||||    
T  28265059 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgcgttaatattaccaaattgtcatttgtttgtatgtatattaaatttg 28264960  T
Q  406 acatttcatatttcaagacaagtta 430  Q
    ||  |||||||||||||||||||||    
T  28264959 actattcatatttcaagacaagtta 28264935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 270 - 437
Target Start/End: Original strand, 45214685 - 45214853
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || |||| |||| ||||| || |||||||||| |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  45214685 tactccctccgtcccgatatgtaagccccctttgcatttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 45214784  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
      ||||||  | ||||||||||||||||| |||||| || |||||||||| |||| || ||||||||||    
T  45214785 ttcaaattgccctttgtttgtatgtgtattaaatttaacttttcatattttaagataaattagtagtat 45214853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 11459150 - 11459281
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||| ||||| |||||||    
T  11459150 ttttcacatttcttatgaaaagttgtcggtgtaaataatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatatgtattaaatttg 11459249  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||| |||||||||||||||||||||||    
T  11459250 atttttcaaatttcaagacaagttagtagtat 11459281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 296 - 437
Target Start/End: Original strand, 21012839 - 21012981
Alignment:
Q  296 accttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtg 394  Q
    |||||||||||||| || | ||||||||||||||||| |||| || |||||||| |||||||||||||||||||| ||||||||| ||||||||||||      
T  21012839 accttttgcatttttcaaatttcttaagaaaagttgttagtgcaattaatgtgtttattttgtgtgttaatattatcaaattatcctttgtttgtatgca 21012938  T
Q  395 tatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||| ||||||||| ||| ||||||||| |||||||||||||||    
T  21012939 tattaaatttgactttttatatttcaaaacaagttagtagtat 21012981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 270 - 434
Target Start/End: Original strand, 17663584 - 17663749
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||||||| ||| | || ||||| |||| |||| ||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||    
T  17663584 tactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtaattaatgtgcctattttatgtgttaatatt 17663683  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    || ||||| || ||||||||||||||||| ||||||||| |||  ||||||||||||| |||||||    
T  17663684 actaaattgtcctttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaattagtag 17663749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 437
Target Start/End: Original strand, 247620 - 247788
Alignment:
Q  270 tactcccaccatccctatatttaagcacc-ttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || ||||||||||||||| || ||  |  |||||||| || ||||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  247620 tactccctccgtccctatatttaagctccattgggttttttcacattttttaaggaaagttgttagtgtaattaatgtgtctattttgtgtgttaatatt 247719  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |  |||||  | ||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||    
T  247720 ataaaattgccctttgtttgtatgtatattaaatttgacttttcatatctcaagacaagttagtagtat 247788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 305 - 437
Target Start/End: Complemental strand, 2048937 - 2048807
Alignment:
Q  305 attttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaattt 404  Q
    ||||||||| |||||||||||||||||  |||||| |||||| |||||||| |||||||| || |||||||||||||| |||||||||||||| ||||||    
T  2048937 attttcacatttcttaagaaaagttgttggtgtaaataatgtctctattttatgtgttaacat-accaaattatcttt-gtttgtatgtgtattaaattt 2048840  T
Q  405 gacatttcatatttcaagacaagttagtagtat 437  Q
    ||| ||| |||||||||||||||||||||||||    
T  2048839 gactttttatatttcaagacaagttagtagtat 2048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 433
Target Start/End: Original strand, 41865676 - 41865839
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatt 368  Q
    ||||||| || |||||  || ||||| |||||||| |||| |||| |||||||||||||||||  || ||| |||||||||||||||||||||||| |||    
T  41865676 tactccctccttcccttaatgtaagccccttttgcttttttcacatttcttaagaaaagttgttggtctaattaatgtgtctattttgtgtgttaacatt 41865775  T
Q  369 accaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||||||||||  |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||    
T  41865776 accaaattatc-cttgtttgtatgtgtattaaatttgactttttatattttaagacaagttagta 41865839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 17251069 - 17250938
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||||||||||||| ||| ||| |||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||  || |||    
T  17251069 ttttcacattttttaagaaaagttgttagtataattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtatttaaattg 17250970  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||||||||    
T  17250969 acttttcatatttcaagacaagatagtagtat 17250938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 35178901 - 35178770
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||||||||||  |||||||| | ||||||||| ||||||||| ||||| |||||| ||||||| ||||| |||||||    
T  35178901 ttttcacatttcttaagaaaagttgtcagtgtagttaatgtgtatgttttgtgtgataatattacgaaattgtcttttatttgtatttgtattaaatttg 35178802  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||| |||| |||||||||    
T  35178801 acttttcatatttcaaggcaagatagtagtat 35178770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 323 - 437
Target Start/End: Complemental strand, 375436 - 375322
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaag 422  Q
    |||||||||  |||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||||||||| ||||||||  ||||||||||||||    
T  375436 aaaagttgtttgtgtaattaatgtgtctattttgtgtgttagtattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaag 375337  T
Q  423 acaagttagtagtat 437  Q
    |||||||||||||||    
T  375336 acaagttagtagtat 375322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 3237749 - 3237851
Alignment:
Q  335 tgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  3237749 tgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtag 3237848  T
Q  435 tat 437  Q
    |||    
T  3237849 tat 3237851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 3645320 - 3645451
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||| ||  ||||||||||||||||||| |||||||||| ||||| || || |||||| ||| ||| |||||||    
T  3645320 ttttcacatttcttaagaaaagttgttagtttacttaatgtgtctattttgtgtattaatattactaaattgtccttcgtttgtgtgtatattaaatttg 3645419  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||| ||||||||||||||    
T  3645420 acttttcatatttcaaggcaagttagtagtat 3645451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 15851528 - 15851659
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||  ||||| || ||||||| ||||||||| |||||||    
T  15851528 ttttcacatttcttaagaaaagttgtgagtgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcctttgtttatatgtgtattaaatttg 15851627  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||||||||||||||||  |||||||||    
T  15851628 aattttcatatttcaagacaaaatagtagtat 15851659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 34329999 - 34330130
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||| ||| ||| ||||||  || ||||||||||||||||||| ||||| || ||||||||||||||||| ||||||     
T  34329999 ttttcacatttcttaaaaaaagttgttagtataattaatgtacctgttttgtgtgttaatattacaaaattgtcctttgtttgtatgtgtattaaattta 34330098  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||||||||||||||||||| |||||||||    
T  34330099 acttttcatatttcaagacaagatagtagtat 34330130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 40346189 - 40346058
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||||||||  ||| || ||||||||  |||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||    
T  40346189 ttttcacattttttaagaaaagttgtttgtgcaattaatgtgttcattttgtgtgttaatattactaaattgtcttttatttgtatgtgtattaaatttg 40346090  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || |||||||||||||| |||||| |||||||    
T  40346089 acttttcatatttcaaggcaagtttgtagtat 40346058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 329 - 437
Target Start/End: Original strand, 7255621 - 7255729
Alignment:
Q  329 tgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagt 428  Q
    |||| |||||| |||||||||| |||||||| ||||||||||||||||||| |||| |||| ||||||| ||||||||| |||||||||||||||||| |    
T  7255621 tgtcggtgtaattaatgtgtctgttttgtgtattaatattaccaaattatcctttgattgtttgtgtattaaatttgacttttcatatttcaagacaaat 7255720  T
Q  429 tagtagtat 437  Q
    |||||||||    
T  7255721 tagtagtat 7255729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 306 - 434
Target Start/End: Original strand, 20361980 - 20362107
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||| ||||||  ||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  20361980 ttttcacatttcttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtat-aaatttg 20362078  T
Q  406 acatttcatatttcaagacaagttagtag 434  Q
    || |||  ||||||||||||| |||||||    
T  20362079 actttttgtatttcaagacaaattagtag 20362107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 38982144 - 38982046
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaa--gttagtagtat 437  Q
    |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||  |||||||||||    
T  38982144 taatgtatctgttttgtgtgttaatattaccaaattattttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaattgttagtagtat 38982046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 436
Target Start/End: Original strand, 44421446 - 44421576
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||||||||| |||||||||||| |||||| ||| |||||| |||||||||||| ||||| || ||||||||||||||||| |||||||    
T  44421446 ttttcacatttcttaagaaaaattgtcagtgtaattaatgtatctgttttgtttgttaatattactaaattgtcatttgtttgtatgtgtattaaatttg 44421545  T
Q  406 acatttcatatttcaagacaagttagtagta 436  Q
       ||| | |||| |||||||||||||||||    
T  44421546 tttttttaaattttaagacaagttagtagta 44421576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 323 - 432
Target Start/End: Original strand, 14527637 - 14527746
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaag 422  Q
    |||| |||| || |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| ||||||||  |||||||||||||     
T  14527637 aaaaattgttagggtaattaatgtgtctattttgtgtgttaatattaccgaattatcatttgtttgtatgtatattaaatttgatttttcatatttcaaa 14527736  T
Q  423 acaagttagt 432  Q
    ||||||||||    
T  14527737 acaagttagt 14527746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 270 - 437
Target Start/End: Original strand, 43709878 - 43710047
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcatttt-cacacttcttaag-aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatat 367  Q
    |||||||  ||||||| ||| |||||||| |||||||||| |||| |||||||| |||| |||| |||| || ||||| |||||||||||||||||||||    
T  43709878 tactcccttcatccctgtatgtaagcaccctttgcatttttcacatttcttaagcaaaaattgttagtgcaattaatgcgtctattttgtgtgttaatat 43709977  T
Q  368 taccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||  |||| || ||||||| ||||||||| ||| || || ||| ||||||||||| |||||||||||||    
T  43709978 tacttaattgtcctttgtttatatgtgtattaaaatttactttttatatttcaagataagttagtagtat 43710047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 426
Target Start/End: Original strand, 26512068 - 26512188
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| |||| |||| ||| ||| |||||||| |||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  26512068 ttttcacatttcttaaaaaaaattgttagtataattaatgtgtttattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttg 26512167  T
Q  406 acatttcatatttcaagacaa 426  Q
    || ||| ||||||||||||||    
T  26512168 actttttatatttcaagacaa 26512188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 28733822 - 28733951
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| ||||| |||||| |||||||||| |||| |||  ||||||||||||||| || ||||||||||||||||| |||||||    
T  28733822 ttttcacattttttaagaaaaattgtcggtgtaattaatgtgtctgttttatgt--taatattaccaaattgtcatttgtttgtatgtgtataaaatttg 28733919  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| ||||||||||| || ||||||||||    
T  28733920 actttttatatttcaagataaattagtagtat 28733951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 25731282 - 25731163
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||||||||||| || || ||| |||| ||| |  ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||  |||||||||    
T  25731282 ttaagaaaagttatcggtataattaatatgtttggtttgtgtgttaatattatcaaattatcttttgtttgtatgtatattaaatttgatttttcatatt 25731183  T
Q  418 tcaagacaagttagtagtat 437  Q
    | ||||||||||||||||||    
T  25731182 ttaagacaagttagtagtat 25731163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 43650031 - 43650162
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||||| |||||| |||||||||||| |||||||||| |||||| |||||||||||| ||||| |  ||||||||||||||||| |||||||    
T  43650031 tttttacatttctttagaaaaattgtcagtgtaattaatgtgtctgttttgtatgttaatattactaaattgttctttgtttgtatgtgtattaaatttg 43650130  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| | ||||||| |||||||||| ||||    
T  43650131 accttttaaatttcaaaacaagttagttgtat 43650162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 437
Target Start/End: Original strand, 13534399 - 13534533
Alignment:
Q  294 gcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgt 393  Q
    |||||| |||| |||||||| ||||||||||| ||||||||||||| |||||||| | ||||||||||||||       ||||||| || |||||||  |    
T  13534399 gcacctattgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtttgttttgtgtgttaat-------aattatccttggtttgta--t 13534489  T
Q  394 gtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  13534490 gtattaaatttgacttttcatatttcaagacaagttagtagtat 13534533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 315 - 437
Target Start/End: Original strand, 14420683 - 14420804
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 414  Q
    |||| |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||  ||||| || |||||     
T  14420683 ttctaaagaaaagttgttagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgcatgtgtat-taatttaacttttcaa 14420781  T
Q  415 atttcaagacaagttagtagtat 437  Q
    ||||||||||| |||| ||||||    
T  14420782 atttcaagacatgttattagtat 14420804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 1246521 - 1246389
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||||||||| ||| ||| |||| | ||||||||||||||||||  ||||| |  ||||||||||||||||| |||||||    
T  1246521 ttttcacatttcttaaaaaaagttgtcagtataattaacgtgtttgttttgtgtgttaatattatgaaattgttctttgtttgtatgtgtattaaatttg 1246422  T
Q  406 ac-atttcatatttcaagacaagttagtagtat 437  Q
    ||  ||||||||||||||||||| || ||||||    
T  1246421 actttttcatatttcaagacaagataatagtat 1246389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 317 - 421
Target Start/End: Original strand, 11071676 - 11071780
Alignment:
Q  317 cttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatat 416  Q
    ||||||||||||||| |||| || ||||||||||| ||| |||||||||||||| ||||| || |||| |||||||||||| ||||||||| ||||||||    
T  11071676 cttaagaaaagttgttagtgcaattaatgtgtctaatttatgtgttaatattactaaattgtcctttgcttgtatgtgtattaaatttgacttttcatat 11071775  T
Q  417 ttcaa 421  Q
    |||||    
T  11071776 ttcaa 11071780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 31644550 - 31644419
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||  ||||||||||| ||||| ||| |||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  31644550 ttttcacattttataagaaaagttatcagtttaattaatgtgtctgttttttgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttg 31644451  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  ||||||| ||||||| ||  |||||||||    
T  31644450 atttttcataattcaagataaaatagtagtat 31644419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 425
Target Start/End: Complemental strand, 38449822 - 38449703
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||| ||||||| |   ||||| |||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||| |||||||    
T  38449822 ttttcacatttcttaataaaagttatttttgtaattaatgtgtctgttttgtgtattaatattatcaaattatcatttgtttgtatgtgtattaaatttg 38449723  T
Q  406 acatttcatatttcaagaca 425  Q
    |   ||||||||||||||||    
T  38449722 attattcatatttcaagaca 38449703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 2917201 - 2917078
Alignment:
Q  310 cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacat 409  Q
    |||| ||||||||||||||||| ||| ||| ||||||||||||||||| |||    ||||  ||||| |||||||||||||||||||| |||||| || |    
T  2917201 cacatttcttaagaaaagttgttagtataattaatgtgtctattttgtatgt----attaataaattgtcttttgtttgtatgtgtattaaatttaactt 2917106  T
Q  410 ttcatatttcaagacaagttagtagtat 437  Q
    || |||||| ||||||||||||||||||    
T  2917105 tttatattttaagacaagttagtagtat 2917078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 331 - 437
Target Start/End: Original strand, 23464705 - 23464811
Alignment:
Q  331 tcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagtta 430  Q
    ||||| ||| |||||||||||||||||| || ||||||| |||||| || ||| ||||||| ||||| ||||||||| ||||||||||||| ||||||||    
T  23464705 tcagtataattaatgtgtctattttgtgcgtaaatattatcaaattgtcctttatttgtatatgtattaaatttgacttttcatatttcaaaacaagtta 23464804  T
Q  431 gtagtat 437  Q
    |||||||    
T  23464805 gtagtat 23464811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 291 - 436
Target Start/End: Original strand, 28190579 - 28190725
Alignment:
Q  291 taagcaccttttgcattttc-acacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgt 389  Q
    |||||||||||||||||||  ||| ||||||   |||||||| ||| ||| |||| ||| |||||| |||||||||||||||||||| || |||||||||    
T  28190579 taagcaccttttgcatttttgacatttcttagagaaagttgttagtataattaatatgtttattttttgtgttaatattaccaaattgtcatttgtttgt 28190678  T
Q  390 atgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    || ||||| || ||| |  |||||||||||||||||| |||||||||    
T  28190679 atatgtattaagtttaatttttcatatttcaagacaatttagtagta 28190725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 308 - 418
Target Start/End: Complemental strand, 45150842 - 45150732
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||| |||||||||||||||||  ||| || ||||||||  ||||||||||||||||||||  |||| || ||||||||||||||||| |||||||||    
T  45150842 ttcacatttcttaagaaaagttgtttgtgcaattaatgtgttcattttgtgtgttaatattactcaattgtcctttgtttgtatgtgtattaaatttgac 45150743  T
Q  408 atttcatattt 418  Q
     ||||||||||    
T  45150742 ttttcatattt 45150732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 42250984 - 42250856
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| |||||| |||||||||  ||||||| ||||||||||||||||||| ||||| ||   ||||| || ||| ||| ||||||||| |||||||    
T  42250984 ttttcacatttcttatgaaaagttggtagtgtaattaatgtgtctattttgtgttttaatgtt---aaattgtcatttatttatatgtgtattaaatttg 42250888  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| |||||||||||||||||| ||||||    
T  42250887 actttttatatttcaagacaagttaatagtat 42250856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 393
Target Start/End: Complemental strand, 4398653 - 4398545
Alignment:
Q  286 atatttaagcaccttttgcattttcacac-ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttg 384  Q
    |||| ||||| |||||||| ||||  ||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| || ||||    
T  4398653 atatataagccccttttgctttttttcacatttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattacgaaattgtcatttg 4398554  T
Q  385 tttgtatgt 393  Q
    |||||||||    
T  4398553 tttgtatgt 4398545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 7278721 - 7278590
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||||||||||| |||| ||| | |||||||||   |||||| ||||||  | ||||||||||||||||| |||||||    
T  7278721 ttttcacatttgttaagaaaaattgtcagtgtaattaatatgtttgttttgtgtgaatatattatcaaattgccctttgtttgtatgtgtattaaatttg 7278622  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    ||  || ||||||||||| |||||||||||||    
T  7278621 actattaatatttcaagataagttagtagtat 7278590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 35241816 - 35241689
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||| ||| ||| ||||||| |||||| |||||| |||||||||| |||||| ||||||||||| ||||||||| |||||||||||| |||  |||||||    
T  35241816 tttttacatttcataagaaatgttgtctgtgtaattaatgtgtctgttttgtttgttaatattatcaaattatcatttgtttgtatgcgtaataaatttg 35241717  T
Q  406 acatttcatatttcaagacaagttagta 433  Q
    || ||| ||| ||||||| |||| ||||    
T  35241716 actttttatacttcaagataagtcagta 35241689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 396
Target Start/End: Complemental strand, 44274775 - 44274685
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgta 396  Q
    |||||||| || |||||||||||||||| ||||| |||||||||| |||| |||||||||||| ||||||| || ||||||||||||||||    
T  44274775 ttttcacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttatgtgttaatattgccaaattgtcatttgtttgtatgtgta 44274685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 2521373 - 2521280
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    ||||||||||||||| |||| ||||||||  ||||| |||||||||||||||||||| ||||||||| |||  ||||||||||||| |||||||    
T  2521373 taatgtgtctattttatgtggtaatattattaaattgtcttttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaattagtag 2521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 6275658 - 6275551
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac-atttcatatttcaa 421  Q
    |||| |||| |||| || |||||||||||||||||||||||| ||||  ||||| |||||||||||||| ||||| |||||| || ||||||||||||||    
T  6275658 aaaaattgttagtgcaattaatgtgtctattttgtgtgttaa-attatgaaattgtcttttgtttgtatatgtattaaatttaactatttcatatttcaa 6275560  T
Q  422 gacaagtta 430  Q
    |||||||||    
T  6275559 gacaagtta 6275551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 437
Target Start/End: Complemental strand, 16808915 - 16808800
Alignment:
Q  322 gaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaa 421  Q
    |||||||| | |||| || |||||||| |||||| ||| |||||||||| ||||| || ||||||||||||| ||| ||| || |  |||||||||||||    
T  16808915 gaaaagttttgagtgcaattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcatatttcaa 16808816  T
Q  422 gacaagttagtagtat 437  Q
    ||||||||||||||||    
T  16808815 gacaagttagtagtat 16808800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 437
Target Start/End: Complemental strand, 16848196 - 16848081
Alignment:
Q  322 gaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaa 421  Q
    |||||||| | |||| || |||||||| |||||| ||| |||||||||| ||||| || ||||||||||||| ||| ||| || |  |||||||||||||    
T  16848196 gaaaagttttgagtgcaattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcatatttcaa 16848097  T
Q  422 gacaagttagtagtat 437  Q
    ||||||||||||||||    
T  16848096 gacaagttagtagtat 16848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 424
Target Start/End: Complemental strand, 8384106 - 8383964
Alignment:
Q  280 atccctatatttaagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatc 379  Q
    |||||||||| ||||||| | || | |||||| | |||||||||||| | || |||| || |||||||| ||||||||||||||||||||||||||| ||    
T  8384106 atccctatatctaagcacttcttactttttcatatttcttaagaaaaatagttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtc 8384007  T
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagac 424  Q
     ||||| | ||  ||||| |||| |||  ||||||||||||||||    
T  8384006 atttgtcttta--tgtattaaatatgatttttcatatttcaagac 8383964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 4758058 - 4758154
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||| ||||||||||||||||||||  ||||| || ||||||| ||||||||| ||||||||| || ||||||| |||| || ||||||||||    
T  4758058 taatgtgtttattttgtgtgttaatattatgaaattgtcctttgtttttatgtgtattaaatttgactttacatattttaagaaaaattagtagtat 4758154  T

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Target: chr2; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 3326733 - 3326852
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatt 417  Q
    |||| |||| ||||| |||||| |||||||||| |||||| | |||||||||  ||||| || ||||||| ||||||||| |||||| || |||||||||    
T  3326733 ttaaaaaaaattgtcggtgtaattaatgtgtctgttttgtatattaatattattaaattgtcctttgtttatatgtgtataaaatttaacttttcatatt 3326832  T
Q  418 tcaagacaagttagtagtat 437  Q
    |||||| ||  |||||||||    
T  3326833 tcaagataacgtagtagtat 3326852  T

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Target: chr2; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 32677476 - 32677603
Alignment:
Q  310 cacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacat 409  Q
    |||| |||||||||||| |||| | |  || ||||||||||||||| || |||||||||  |||||| || ||||||||||  ||||  ||||||||  |    
T  32677476 cacatttcttaagaaaaattgttaatacaattaatgtgtctattttatgggttaatattttcaaattgtcatttgtttgtacatgtactaaatttgattt 32677575  T
Q  410 ttcatatttcaagacaagttagtagtat 437  Q
    ||||||||||||||||| ||||||||||    
T  32677576 ttcatatttcaagacaaattagtagtat 32677603  T

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Target: chr2; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 376
Target Start/End: Original strand, 27749509 - 27749579
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaatt 376  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||| |||||||| |||||||||| |||||    
T  27749509 ttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtattaatattactaaatt 27749579  T

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Target: chr2; HSP #59
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 404
Target Start/End: Original strand, 4033587 - 4033676
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaattt 404  Q
    ||||||||||||||| | ||||||| |||||| ||| |||| |||||||||||||| ||||| |  ||||||||||||||||| ||||||    
T  4033587 ttcttaagaaaagttattagtgtaattaatgtttctgttttctgtgttaatattactaaattgttctttgtttgtatgtgtattaaattt 4033676  T

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Target: chr2; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 29971285 - 29971387
Alignment:
Q  323 aaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaag 422  Q
    ||||||| || |||||| ||||| |||| |||||| |||||| ||||| ||||| | |||||||||||||| ||| |||||| |||||||| ||||||||    
T  29971285 aaaagttttcggtgtaattaatg-gtctgttttgtatgttaaaattactaaatttttttttgtttgtatgtctattaaatttaacatttcaaatttcaag 29971383  T
Q  423 acaa 426  Q
    ||||    
T  29971384 acaa 29971387  T

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Target: chr2; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 12498314 - 12498249
Alignment:
Q  367 ttaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    |||||||||| | |||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  12498314 ttaccaaattgt-ttttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagttagta 12498249  T

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Target: chr2; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 8393240 - 8393333
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    |||||||| | |||||||||||||||||| |||||| |  ||||||||||||||| | |||||||   |||||| |||||||| ||||||||||    
T  8393240 taatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcatgtttcaagataagttagtag 8393333  T

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Target: chr2; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 36846787 - 36846880
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    |||||||| | |||||||||||||||||| |||||| |  ||||||||||||||| | |||||||   |||||| |||||||| ||||||||||    
T  36846787 taatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcatgtttcaagataagttagtag 36846880  T

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Target: chr2; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 44462654 - 44462561
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtag 434  Q
    |||||||| | |||||||||||||||||| |||||| |  ||||||||||||||| | |||||||   |||||| |||||||| ||||||||||    
T  44462654 taatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcatgtttcaagataagttagtag 44462561  T

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Target: chr2; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 406
Target Start/End: Original strand, 6597853 - 6597952
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || |||  |||||||||   ||||| |||| ||||||||||||||||||| ||||||||| |||| ||| ||||||||||||| |||||||    
T  6597853 ttttcacattttttacaaaaagttgttgatgtaattaatatgtctattttgtgtgttaacattaccaaaatatccttt-tttgtatgtgtattaaatttg 6597951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 43119424 - 43119360
Alignment:
Q  359 tgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaaga 423  Q
    |||||||||||| ||||| || ||||||||||||||||| ||||||||  |||||||||||||||    
T  43119424 tgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaaga 43119360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 13477141 - 13477010
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| || ||||||||| |||| |||| || |||| ||| |||||| |||||||||||||| | ||| || ||| ||||||||  ||| |||||||    
T  13477141 ttttcacattttttaagaaaaattgttagtgcaattaatatgtttattttatgtgttaatattactagattgtcctttatttgtatgcatattaaatttg 13477042  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||| || | || ||||||||||    
T  13477041 atttttcatattttaaaataaattagtagtat 13477010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 8667635 - 8667725
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgt-gttaatattaccaaattatcttttgtttgtatgtgt 395  Q
    |||||||| ||| ||||||||||||||||| ||| |||| ||||| |||||| |  ||||||||| |||||| || |||||||||||||||    
T  8667635 ttttcacatttcctaagaaaagttgtcagtctaattaatatgtctgttttgtatctttaatattatcaaattctcctttgtttgtatgtgt 8667725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 432
Target Start/End: Complemental strand, 36174900 - 36174774
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||  |||||||||||| |||| |||| || |||| |||||||||  ||||| | |||||  ||||| |||||| ||||||||||||| |||||||    
T  36174900 ttttcacgtttcttaagaaaaattgttagtgcaaataatatgtctatttcatgtgtgagtattattaaattgtcttttatttgtatgtgtattaaatttg 36174801  T
Q  406 acatttcatatttcaagacaagttagt 432  Q
    || |||   ||||||| | ||||||||    
T  36174800 acttttatcatttcaatataagttagt 36174774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 415
Target Start/End: Complemental strand, 43638893 - 43638820
Alignment:
Q  342 aatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcata 415  Q
    ||||||| ||||||| ||||||||||||| |||||||| ||| ||| ||||||||| ||||||||  |||||||    
T  43638893 aatgtgtttattttgcgtgttaatattacaaaattatcatttatttatatgtgtattaaatttgatttttcata 43638820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 374
Target Start/End: Complemental strand, 34042200 - 34042096
Alignment:
Q  270 tactcccaccatccctatatttaagcaccttttgcattttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatatta 369  Q
    ||||||| ||| |||||||| ||||| |||||   ||||||||| || || | |||| |||| |||  || ||||||||||||||||| |||||||||||    
T  34042200 tactccctccagccctatatctaagcccctttgcaattttcacatttttttaaaaaaattgttagttcaattaatgtgtctattttgtatgttaatatta 34042101  T
Q  370 ccaaa 374  Q
    |||||    
T  34042100 ccaaa 34042096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 15578154 - 15578059
Alignment:
Q  341 taatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    |||||||| | |||||||||||||||||| |||||| |  ||| ||||||||||| | ||||||    |||||| |||||||| ||||||||||||    
T  15578154 taatgtgtttgttttgtgtgttaatattatcaaatttttctttatttgtatgtgttttaaatttattttttcatgtttcaagataagttagtagta 15578059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 2395799 - 2395849
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttg 356  Q
    |||| ||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  2395799 tttttacatttcttaagaaaagttgttagtgtaattaatgtgtctattttg 2395849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 12417682 - 12417617
Alignment:
Q  350 tattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcata 415  Q
    |||||| ||||||||||||| |||||| | |||| ||||||||||||| ||||||||  |||||||    
T  12417682 tattttttgtgttaatattaacaaattgttttttatttgtatgtgtattaaatttgatttttcata 12417617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 12429742 - 12429677
Alignment:
Q  350 tattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcata 415  Q
    |||||| ||||||||||||| |||||| | |||| ||||||||||||| ||||||||  |||||||    
T  12429742 tattttttgtgttaatattaacaaattgttttttatttgtatgtgtattaaatttgatttttcata 12429677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 437
Target Start/End: Original strand, 6408681 - 6408757
Alignment:
Q  361 ttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||  |||||||  ||| ||||||||||||| |||||  || ||||||||||||||| |||||| ||||||    
T  6408681 ttaatattattaaattattatttatttgtatgtgtattaaattcaacttttcatatttcaagaaaagttaatagtat 6408757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 20426950 - 20427002
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattac 370  Q
    ||||||||| |||| |||| || ||||||||||||||||||||||| ||||||    
T  20426950 ttaagaaaaattgttagtgaaattaatgtgtctattttgtgtgttattattac 20427002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 31583697 - 31583634
Alignment:
Q  348 tctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacattt 411  Q
    |||| ||||||| ||||||||| |||||| || ||||||||||||||  | |||||||||||||    
T  31583697 tctactttgtgtattaatattatcaaattgtcctttgtttgtatgtgctttaaatttgacattt 31583634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 423
Target Start/End: Complemental strand, 35453814 - 35453726
Alignment:
Q  333 agtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaaga 423  Q
    ||||||| ||||||||||||||| | |||||||||||| ||||| |  ||||||| ||  ||||| |||||| || |||||||||| ||||    
T  35453814 agtgtaattaatgtgtctattttatatgttaatattactaaattgttctttgttttta--tgtattaaatttaacttttcatatttgaaga 35453726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 404
Target Start/End: Original strand, 3337683 - 3337781
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaattt 404  Q
    |||||||| ||||||||||||| |||   || ||  ||||||| |||||||  ||||||||||| |||||| || ||||||| || |||||| ||||||    
T  3337683 ttttcacatttcttaagaaaagatgttgctgcaatcaatgtgtatattttgcatgttaatattagcaaattgtcatttgtttatacgtgtattaaattt 3337781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 433
Target Start/End: Complemental strand, 24490807 - 24490730
Alignment:
Q  358 gtgttaatattaccaaattatcttt--tgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 433  Q
    ||||||||||||||||||||| | |  | ||||||||||||| | ||||||| ||| ||| ||||| |||||||||||    
T  24490807 gtgttaatattaccaaattatttatattttttgtatgtgtattagatttgactttttataattcaaaacaagttagta 24490730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 534549 - 534593
Alignment:
Q  393 tgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||| ||||||||| ||||||||||||||||||| || ||||||    
T  534549 tgtattaaatttgacttttcatatttcaagacaagataatagtat 534593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 437
Target Start/End: Original strand, 11121259 - 11121340
Alignment:
Q  355 tgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagac-aagttagtagtat 437  Q
    ||||||| ||||||| |||||| || |||||||  ||||  || ||||||||| ||| |||||||||||| |||||||||||||    
T  11121259 tgtgtgtaaatattatcaaattgtcctttgtttaaatgt--attaaatttgactttttatatttcaagacaaagttagtagtat 11121340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 426
Target Start/End: Original strand, 12121891 - 12122002
Alignment:
Q  318 ttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtg--tatcaaatttgac-atttcat 414  Q
    |||| ||||||||| ||||||| |||| |||||||||| | ||| |||||||  ||||| | ||||  |||||||||  ||| | |||||||  ||||||    
T  12121891 ttaaaaaaagttgttagtgtaattaatatgtctattttatatgtgaatattattaaattgttttttacttgtatgtgtatattatatttgactttttcat 12121990  T
Q  415 atttcaagacaa 426  Q
    ||||||||||||    
T  12121991 atttcaagacaa 12122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 30401582 - 30401526
Alignment:
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagta 436  Q
    |||||||||||||||||| |||||| |  |||||||||| |||  ||||||||||||    
T  30401582 ttttgtttgtatgtgtattaaatttaatttttcatattttaaggtaagttagtagta 30401526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Original strand, 214615 - 214746
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttg 405  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||| || ||||||||||||||||| |||||||    
T  214615 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttg 214714  T
Q  406 acatttcatatttcaagacaagttagtagtat 437  Q
    || ||| |||||| |||| |||||||||||||    
T  214715 actttttatattttaagataagttagtagtat 214746  T

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Target: scaffold0038 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 307 - 437
Target Start/End: Complemental strand, 38584 - 38453
Alignment:
Q  307 tttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttga 406  Q
    ||||||| ||||||| |||| |||| ||| ||| |||||||||||||||||||||||||||||||| ||||||  |||||| ||||| ||| ||||||||    
T  38584 tttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttga 38485  T
Q  407 c-atttcatatttcaagacaagttagtagtat 437  Q
    |  |||||||||||||||||||||||||||||    
T  38484 ctttttcatatttcaagacaagttagtagtat 38453  T

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Target: scaffold0699 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 433
Target Start/End: Original strand, 7577 - 7701
Alignment:
Q  308 ttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgac 407  Q
    |||||| ||||||||||||||||| | ||||| | | ||||||||||||| ||| | |||||| ||||| || ||||||| ||||||||| |||||||||    
T  7577 ttcacatttcttaagaaaagttgttaatgtaattgaggtgtctattttgt-tgtaagtattacaaaattgtcctttgtttatatgtgtattaaatttgac 7675  T
Q  408 atttcatatttcaagacaagttagta 433  Q
     |||||||||||||||||||||||||    
T  7676 ttttcatatttcaagacaagttagta 7701  T

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Target: scaffold0013 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 285 - 437
Target Start/End: Original strand, 49111 - 49265
Alignment:
Q  285 tatatttaagcaccttttgcattttc-acacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatctttt 383  Q
    ||||||||| ||| |||||||||||  ||| |||||||||||| |||| | ||||| |||| |||||| |||||||||||||||||  ||||| || |||    
T  49111 tatatttaaacactttttgcattttttacatttcttaagaaaaattgttaatgtaattaatatgtctactttgtgtgttaatattattaaattgtcattt 49210  T
Q  384 gtttgtatgtgtatcaaatttgac-atttcatatttcaagacaagttagtagtat 437  Q
    ||||| |||| ||| |||||||||  ||||||||||||| |||| ||||||||||    
T  49211 gtttgcatgtttattaaatttgactttttcatatttcaaaacaaattagtagtat 49265  T

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Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 61361 - 61281
Alignment:
Q  335 tgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcata 415  Q
    ||||| ||| |||| | ||||||||||||||||||  ||||| || ||| ||| ||||||||| |||||| || |||||||    
T  61361 tgtaattaacgtgtttgttttgtgtgttaatattattaaattgtcctttatttatatgtgtattaaatttaacttttcata 61281  T

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Target: scaffold0182 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 433
Target Start/End: Original strand, 22073 - 22184
Alignment:
Q  322 gaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaa 421  Q
    |||| ||| ||||||||| |||||||| | |||||||| |||||||||||| ||| || ||||||||||||| ||| |||||| || |||||||||| ||    
T  22073 gaaatgttatcagtgtaattaatgtgtttgttttgtgtattaatattaccatattgtcctttgtttgtatgtatattaaatttaacttttcatatttgaa 22172  T
Q  422 gacaagttagta 433  Q
    ||||||||||||    
T  22173 gacaagttagta 22184  T

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Target: scaffold0182; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 412
Target Start/End: Original strand, 18695 - 18792
Alignment:
Q  315 ttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttc 412  Q
    ||||||| ||||||||| | || || |||| ||| ||||||||| ||||||||||||||||| || ||||||| ||||||| | ||||||||| ||||    
T  18695 ttcttaaaaaaagttgttaatgcaattaatttgtttattttgtgggttaatattaccaaattgtcatttgtttctatgtgttttaaatttgacttttc 18792  T

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Target: scaffold0176 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 19529 - 19612
Alignment:
Q  306 ttttcacacttcttaagaaaagttgtcagtgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtat 391  Q
    |||||||| |||||| ||||||||||||||| || |||| |||||||||  |||| |||||||||||||||||| |||||||||||    
T  19529 ttttcacatttcttacgaaaagttgtcagtgcaattaatatgtctattt--tgtgctaatattaccaaattatcctttgtttgtat 19612  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 25770 - 25826
Alignment:
Q  380 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  25770 ttttgtttgtatgtgtattaaatttgac-tttcatatttcaagacaagtgagtagtat 25826  T

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Target: scaffold0166 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 23729 - 23628
Alignment:
Q  335 tgtaactaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagac-aagttagta 433  Q
    ||||| |||||||| |||||||| ||||||||||| |||||| | | || ||||||||||||| ||||||||  ||||| |||| ||||| |||||||||    
T  23729 tgtaattaatgtgtttattttgtatgttaatattatcaaattgt-tcttttttgtatgtgtattaaatttgatttttcacatttgaagacaaagttagta 23631  T
Q  434 gta 436  Q
    |||    
T  23630 gta 23628  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 5954 - 5870
Alignment:
Q  353 tttgtgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagtagtat 437  Q
    ||||||||| ||| |||| ||||| |  ||||||  |||||||||  |||||||| ||||||| || || |||||||||||||||    
T  5954 tttgtgtgtgaattttactaaattgttctttgttcatatgtgtatttaatttgacttttcataatttaatacaagttagtagtat 5870  T

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