View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14369_high_6 (Length: 310)
Name: NF14369_high_6
Description: NF14369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14369_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 19 - 300
Target Start/End: Complemental strand, 5955285 - 5955004
Alignment:
| Q |
19 |
ttaaggaacttggttattcaaggaacgatcctgtttttgcaatgcgcggatcgatgcattcgattcaaagagatatgatcatgctagaaaatcagcttcc |
118 |
Q |
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| T |
5955285 |
ttaaggaacttggttattcaaggaacgatcctgtttttgcaatgcgcggatcgatgcattcgattcaaagagatatgatcatgctagaaaatcagcttcc |
5955186 |
T |
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| Q |
119 |
ccttttcatactagatttgcttctgggaattcagattggtaaaccagatttaaaaggacttgttgcaaatctagcactcagattcttcgaccctttaatg |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5955185 |
ccttttcatactagatttgcttctgggaattcagattggtaaaccagatttgaaaggacttgttgcaaatctagcactcagattcttcgaccctttaatg |
5955086 |
T |
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| Q |
219 |
ccaacagatgaaccattaacaaaaagtgatagaaataaactggaatcaacatttagaaaaagcactaccaacgccacctttg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
5955085 |
ccaacagatgaaccattaacaaaaagtgatagaaataaactggaatcaacatttagaaaaagcactaccaatgccacctttg |
5955004 |
T |
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